Carg17681 (gene) Silver-seed gourd

Overview
NameCarg17681
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionBeta-expansin
LocationCucurbita_argyrosperma_scaffold_119 : 795976 .. 797044 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCAATCCTATGATCCCGATTGGTCCCCGGCCATCGCCACCTGGTACGGTACCCCCAATGGTGCCGGGAGCGATGGTACAACTATCTACACATTTCAACTTAATATTATTTATCACTAAATATCTTAATCAATTGAATTATACTCAAACTTATACTACGTTTTTTTTTTTTTTAAGGAGGTTCCTGTGGGTATGGAAAAGCGGTCGAGGAACCACCATTTTCGTCGTTAATCGCCGCAGGTGGCCCTTCTTTGTACAAATCCGGCAAAGCCTGTGGAGCTTGTTATCAGGTAAATGTGGCTTTAACTACATATGATCCGAATGAAATGCCCCATTATTGTATACCAAATGAATGGATTATCTATCAGGTGAAGTGCTCCGGAGAAGGCGCATGTTCAGGGAGTCCGGTGACGGTGGTTATAACTGATAGTTGTCCGGGCGGCTCCTGTGCTTCCGACTCTGTCCACTTCGACCTCAGTGGCACTGCTTTTGGTGCTATGGCTGCTACTGGGCGGGCCGATGAACTCCGCAGTCTCGGCGTTTTGCACATTCAACACAAGAGGTTATTCATATTCAAACACAACACTTTTTACTCTGGAAAATGGAGAAGTTATTATAATTTCAATTATATCAAAATTTAACACTCTCTTCAGTTGGGTTAATCAATAAGTAAATGACATCACATATTATTATACGAGGGTCAATATTATAATATTTGATGTTTGATTGTAGGGTGGAATGCAATTACCCGGGAACCTCGATCAACTTCATCGTGGACTCAGGGTCGAACCCAAACTACTTCGCAGTTCTGATCGAATACGAAGATGGAGATGGAGAGCTAGGTTTAGTGGAGCTGAAACCGGCGCTCAACTCGTACTCATGGATTCCAATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTCTGCCTCTGCGCTTCAACCTCCCTTCTCCCTCAGGCTCACTGCCCTCGACTCCGGCAAGACCGTGGTGGCTAACAACGTAATTCCGGTCGGGTGGCAGCCCGGACAGACTTATAGATCAGTGGTCAACTTCGATACATGA

mRNA sequence

ATGTACCAATCCTATGATCCCGATTGGTCCCCGGCCATCGCCACCTGGTACGGTACCCCCAATGGTGCCGGGAGCGATGGAGGTTCCTGTGGGTATGGAAAAGCGGTCGAGGAACCACCATTTTCGTCGTTAATCGCCGCAGGTGGCCCTTCTTTGTACAAATCCGGCAAAGCCTGTGGAGCTTGTTATCAGGTGAAGTGCTCCGGAGAAGGCGCATGTTCAGGGAGTCCGGTGACGGTGGTTATAACTGATAGTTGTCCGGGCGGCTCCTGTGCTTCCGACTCTGTCCACTTCGACCTCAGTGGCACTGCTTTTGGTGCTATGGCTGCTACTGGGCGGGCCGATGAACTCCGCAGTCTCGGCGTTTTGCACATTCAACACAAGAGGGTGGAATGCAATTACCCGGGAACCTCGATCAACTTCATCGTGGACTCAGGGTCGAACCCAAACTACTTCGCAGTTCTGATCGAATACGAAGATGGAGATGGAGAGCTAGGTTTAGTGGAGCTGAAACCGGCGCTCAACTCGTACTCATGGATTCCAATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTCTGCCTCTGCGCTTCAACCTCCCTTCTCCCTCAGGCTCACTGCCCTCGACTCCGGCAAGACCGTGGTGGCTAACAACGTAATTCCGGTCGGGTGGCAGCCCGGACAGACTTATAGATCAGTGGTCAACTTCGATACATGA

Coding sequence (CDS)

ATGTACCAATCCTATGATCCCGATTGGTCCCCGGCCATCGCCACCTGGTACGGTACCCCCAATGGTGCCGGGAGCGATGGAGGTTCCTGTGGGTATGGAAAAGCGGTCGAGGAACCACCATTTTCGTCGTTAATCGCCGCAGGTGGCCCTTCTTTGTACAAATCCGGCAAAGCCTGTGGAGCTTGTTATCAGGTGAAGTGCTCCGGAGAAGGCGCATGTTCAGGGAGTCCGGTGACGGTGGTTATAACTGATAGTTGTCCGGGCGGCTCCTGTGCTTCCGACTCTGTCCACTTCGACCTCAGTGGCACTGCTTTTGGTGCTATGGCTGCTACTGGGCGGGCCGATGAACTCCGCAGTCTCGGCGTTTTGCACATTCAACACAAGAGGGTGGAATGCAATTACCCGGGAACCTCGATCAACTTCATCGTGGACTCAGGGTCGAACCCAAACTACTTCGCAGTTCTGATCGAATACGAAGATGGAGATGGAGAGCTAGGTTTAGTGGAGCTGAAACCGGCGCTCAACTCGTACTCATGGATTCCAATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTCTGCCTCTGCGCTTCAACCTCCCTTCTCCCTCAGGCTCACTGCCCTCGACTCCGGCAAGACCGTGGTGGCTAACAACGTAATTCCGGTCGGGTGGCAGCCCGGACAGACTTATAGATCAGTGGTCAACTTCGATACATGA

Protein sequence

MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT
Homology
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BLAST of Carg17681 vs. NCBI nr
Match: XP_022924767.1 (putative expansin-B2 [Cucurbita moschata])

HSP 1 Score: 493.4 bits (1269), Expect = 4.3e-136
Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0 

Query: 1   MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACG 60
           MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACG
Sbjct: 41  MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACG 100

Query: 61  ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL 120
           ACYQVKCSGEGACSG PVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL
Sbjct: 101 ACYQVKCSGEGACSGGPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL 160

Query: 121 GVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI 180
           GVLHIQHK VECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI
Sbjct: 161 GVLHIQHKSVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI 220

Query: 181 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 240
           PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT
Sbjct: 221 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 279

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BLAST of Carg17681 vs. NCBI nr
Match: XP_023528384.1 (putative expansin-B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.1 bits (1263), Expect = 2.1e-135
Identity = 236/239 (98.74%), Postives = 238/239 (99.58%), Query Frame = 0 

Query: 1   MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACG 60
           MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYG+AVEEPPFSSLIAAGGPSLYKSGKACG
Sbjct: 42  MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGRAVEEPPFSSLIAAGGPSLYKSGKACG 101

Query: 61  ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL 120
           ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL
Sbjct: 102 ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL 161

Query: 121 GVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI 180
           GVLHIQHKRVECNYPGTSINFIVDSGSNP+YFAVLIEYEDGDGELGLVELKPALNSYSWI
Sbjct: 162 GVLHIQHKRVECNYPGTSINFIVDSGSNPDYFAVLIEYEDGDGELGLVELKPALNSYSWI 221

Query: 181 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 240
           PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPV WQPGQTYRSVVNFDT
Sbjct: 222 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVRWQPGQTYRSVVNFDT 280

[Close]
BLAST of Carg17681 vs. NCBI nr
Match: XP_022979601.1 (putative expansin-B2 [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132
Identity = 233/239 (97.49%), Postives = 234/239 (97.91%), Query Frame = 0 

Query: 1   MYQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACG 60
           MYQSYD DWSPAIATWYGTPNGAGSDGGSCGY KAVEEPPFSSLIAAGGPSLYKSGKACG
Sbjct: 40  MYQSYDLDWSPAIATWYGTPNGAGSDGGSCGYEKAVEEPPFSSLIAAGGPSLYKSGKACG 99

Query: 61  ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSL 120
           ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAA GRADELRSL
Sbjct: 100 ACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAAPGRADELRSL 159

Query: 121 GVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI 180
           GVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI
Sbjct: 160 GVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWI 219

Query: 181 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 240
           PM+QSWGAVWKLDSASALQPPFSLRLTAL SGKTVVAN VIPVGWQPGQTYRSVVNFDT
Sbjct: 220 PMQQSWGAVWKLDSASALQPPFSLRLTALGSGKTVVANKVIPVGWQPGQTYRSVVNFDT 278

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BLAST of Carg17681 vs. NCBI nr
Match: XP_008437785.1 (PREDICTED: putative expansin-B2 [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 3.3e-120
Identity = 212/238 (89.08%), Postives = 224/238 (94.12%), Query Frame = 0 

Query: 2   YQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGA 61
           YQSYD DWSPA+ATWYG P+GAGSDGGSCGYGKAVE+PPFSS IAAGGPSLYK+G+ACGA
Sbjct: 33  YQSYDSDWSPAVATWYGPPDGAGSDGGSCGYGKAVEQPPFSSFIAAGGPSLYKNGQACGA 92

Query: 62  CYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLG 121
           CYQVKCSGE ACSG+PVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRA+ELRSLG
Sbjct: 93  CYQVKCSGESACSGNPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRAEELRSLG 152

Query: 122 VLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKP-ALNSYSWI 181
           VLHIQHKRVECNYPGTSINFIVDSGSN NYFA LIEYEDGDGELG VELK  AL+S SWI
Sbjct: 153 VLHIQHKRVECNYPGTSINFIVDSGSNSNYFAALIEYEDGDGELGSVELKQGALDSNSWI 212

Query: 182 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFD 239
           PMK+SWGAVWKLD  SALQ PFSLRLTAL+SGKTVVANNVIP GWQPG++YRSVVNFD
Sbjct: 213 PMKRSWGAVWKLDYGSALQAPFSLRLTALESGKTVVANNVIPAGWQPGKSYRSVVNFD 270

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BLAST of Carg17681 vs. NCBI nr
Match: XP_004133769.1 (PREDICTED: putative expansin-B2 [Cucumis sativus] >KGN56356.1 hypothetical protein Csa_3G117420 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 9.5e-120
Identity = 213/238 (89.50%), Postives = 223/238 (93.70%), Query Frame = 0 

Query: 2   YQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGA 61
           YQS D DWSPA+ATWYG P+GAGSDGGSCGYGKAVE+PPFSS IAAGGPSLYK G+ACGA
Sbjct: 33  YQSDDSDWSPAVATWYGPPDGAGSDGGSCGYGKAVEQPPFSSFIAAGGPSLYKYGQACGA 92

Query: 62  CYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLG 121
           CYQVKCSGEGACSG+PVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRA+ELRSLG
Sbjct: 93  CYQVKCSGEGACSGNPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRAEELRSLG 152

Query: 122 VLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKP-ALNSYSWI 181
           VLHIQHKRVECNYPGTSINFIVDSGSN NYFA LIEYEDGDGELG VELK  A++S SWI
Sbjct: 153 VLHIQHKRVECNYPGTSINFIVDSGSNSNYFAALIEYEDGDGELGSVELKQGAVDSNSWI 212

Query: 182 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFD 239
           PMKQSWGAVWKLDS SALQ PFSLRLTALDSGKTVVANNVIP GWQ G++YRSVVNFD
Sbjct: 213 PMKQSWGAVWKLDSGSALQAPFSLRLTALDSGKTVVANNVIPAGWQAGKSYRSVVNFD 270

[Close]
BLAST of Carg17681 vs. TAIR10
Match: AT1G65680.1 (expansin B2)

HSP 1 Score: 322.0 bits (824), Expect = 3.1e-88
Identity = 151/232 (65.09%), Postives = 184/232 (79.31%), Query Frame = 0 

Query: 6   DPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQV 65
           D DWS A +TWYG P G GSDGG+CGYG AV +PPFS +++AGGPSL+KSGK CGACYQV
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 103

Query: 66  KCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHI 125
           KC+ + ACS +PVTVVITD CPG  C  +SVHFDLSGTAFGAMA +G+  +LR++G L I
Sbjct: 104 KCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQI 163

Query: 126 QHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQS 185
            +K+VECNY G ++ F VD GSN N FAVL+ Y +GDGE+G +ELK AL+S  W+ M QS
Sbjct: 164 LYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQS 223

Query: 186 WGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           WGAVWKLD +S L+ P SLR+T+L+SGKTVVA+NVIP  WQPG  Y+S VNF
Sbjct: 224 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]
BLAST of Carg17681 vs. TAIR10
Match: AT2G45110.1 (expansin B4)

HSP 1 Score: 273.9 bits (699), Expect = 9.6e-74
Identity = 127/223 (56.95%), Postives = 168/223 (75.34%), Query Frame = 0 

Query: 15  TWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACS 74
           TWYG P GAGS GG+CGYG AV  PP  ++++AGGPSL+ +GK CG CYQV C G  ACS
Sbjct: 39  TWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACS 98

Query: 75  GSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNY 134
           GSP+TV ITD CPGG CAS+ VH DLSG A GA+A  G+AD+LRS GV+ + +KR  C Y
Sbjct: 99  GSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 158

Query: 135 PGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDS 194
            GT+I F +D+G+NP Y + ++EYE+GDG+L  VE++PA  S+  I M++   AVWK++S
Sbjct: 159 RGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAGGSF--ISMQEMRSAVWKVNS 218

Query: 195 ASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
            SAL+ PF++RLT+ +S K +VA NVIP  W+P ++YRS+VNF
Sbjct: 219 GSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

[Close]
BLAST of Carg17681 vs. TAIR10
Match: AT1G65681.1 (beta expansin 6)

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-64
Identity = 114/216 (52.78%), Postives = 154/216 (71.30%), Query Frame = 0 

Query: 22  GAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVV 81
           GAGS GG+CG+  AV  PP   +++AGGPS++ +G  CG C+Q+ C+G  ACS  P+TV 
Sbjct: 11  GAGSTGGACGF--AVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVT 70

Query: 82  ITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNYPGTSINF 141
           ITD CPGG CAS+  HFDLSG A GA+A  G+ D LRS GVL + ++RVEC Y  T+I F
Sbjct: 71  ITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAF 130

Query: 142 IVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPP 201
            +D G+NP Y + ++EYE+GDG+L  +E++PA   +  IPM++   AVWK+ S S L  P
Sbjct: 131 RMDPGANPYYISFVVEYENGDGDLAYIEIQPADGEF--IPMQEMRSAVWKISSGSPLTGP 190

Query: 202 FSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           F++RLT+ +S K V+A NVIP  W+P +TYRSVVNF
Sbjct: 191 FNIRLTSAESHKVVLAYNVIPANWKPNETYRSVVNF 222

[Close]
BLAST of Carg17681 vs. TAIR10
Match: AT4G28250.1 (expansin B3)

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-58
Identity = 104/229 (45.41%), Postives = 150/229 (65.50%), Query Frame = 0 

Query: 9   WSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCS 68
           W PA+ATWYG+PNG GSDGG+CGYG  V+  P  + + A  P L+K+G+ CGACY+V+C 
Sbjct: 36  WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL 95

Query: 69  GEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHK 128
            +  CS   VTV+ITD CPG  C+  S HFDLSG  FG +A  G +  LR+ G++ + ++
Sbjct: 96  DKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYR 155

Query: 129 RVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGA 188
           R  C Y G +I F V+ GS   + ++L+E+EDG+G++G + ++ A  +  W+ MK  WGA
Sbjct: 156 RTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQA-GAREWLEMKHVWGA 215

Query: 189 VWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
            W +     L+ PFS++LT L +GKT+ A +V+P  W P  TY S +NF
Sbjct: 216 NWCI-IGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNF 260

[Close]
BLAST of Carg17681 vs. TAIR10
Match: AT2G20750.1 (expansin B1)

HSP 1 Score: 209.1 bits (531), Expect = 2.9e-54
Identity = 105/230 (45.65%), Postives = 144/230 (62.61%), Query Frame = 0 

Query: 9   WSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCS 68
           W PA ATWYG+  G GS GG+CGYG  V+  PF + + A  P L+K G+ CGACY+V+C 
Sbjct: 40  WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL 99

Query: 69  GEGACSGSPVTVVITDSCPGG-SCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQH 128
            +  CS   VT++ TD  P G S  +   HFDLSG AFG MA  G    +R+ G+L+I +
Sbjct: 100 DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILY 159

Query: 129 KRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWG 188
           +R  C Y G +I F V++GS   + ++LIEYEDG+G++G + ++ A  S  WI MK  WG
Sbjct: 160 RRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQA-GSKEWISMKHIWG 219

Query: 189 AVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           A W +     L+ PFS++LT L + KT+ A +VIP  W P  TY S +NF
Sbjct: 220 ANWCI-VEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]
BLAST of Carg17681 vs. Swiss-Prot
Match: sp|Q9SHY6|EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 5.6e-87
Identity = 151/232 (65.09%), Postives = 184/232 (79.31%), Query Frame = 0 

Query: 6   DPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQV 65
           D DWS A +TWYG P G GSDGG+CGYG AV +PPFS +++AGGPSL+KSGK CGACYQV
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 103

Query: 66  KCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHI 125
           KC+ + ACS +PVTVVITD CPG  C  +SVHFDLSGTAFGAMA +G+  +LR++G L I
Sbjct: 104 KCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQI 163

Query: 126 QHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQS 185
            +K+VECNY G ++ F VD GSN N FAVL+ Y +GDGE+G +ELK AL+S  W+ M QS
Sbjct: 164 LYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQS 223

Query: 186 WGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           WGAVWKLD +S L+ P SLR+T+L+SGKTVVA+NVIP  WQPG  Y+S VNF
Sbjct: 224 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]
BLAST of Carg17681 vs. Swiss-Prot
Match: sp|Q7XT40|EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-86
Identity = 151/229 (65.94%), Postives = 181/229 (79.04%), Query Frame = 0 

Query: 9   WSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCS 68
           WS   ATWYG  NGAGSDGG+CGY  AV + PFSS+IAAG PS+YKSG  CG+CYQVKC+
Sbjct: 37  WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCT 96

Query: 69  GEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHK 128
           G  ACSG+PVTVV+TD CPGG C S+ VHFDLSGTAFGAMA  G+AD+LR+ GVL IQ+ 
Sbjct: 97  GNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYN 156

Query: 129 RVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGA 188
           RV CN+ G  + F+VD GSNPNYFAVL++YE+GDG+L  VEL       +W  M+QSWGA
Sbjct: 157 RVPCNWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGA 216

Query: 189 VWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           VWKL++ SALQ PFS+RLT+  SGKT+VA+NVIP GW+PG +Y S VNF
Sbjct: 217 VWKLNAGSALQAPFSIRLTS-SSGKTLVASNVIPSGWKPGMSYISTVNF 264

[Close]
BLAST of Carg17681 vs. Swiss-Prot
Match: sp|Q5W6Z9|EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.8e-85
Identity = 147/229 (64.19%), Postives = 181/229 (79.04%), Query Frame = 0 

Query: 9   WSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCS 68
           WS   ATWYG  NGAGSDGG+CGY  AV++ PFSS+IAAG PS+YKSG  CG+CYQVKCS
Sbjct: 37  WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCS 96

Query: 69  GEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHK 128
           G  ACSG+PVTVV+TD CPGG C S+ VHFDLSGTAFGAMA  G+AD+LR+ GVL IQ+ 
Sbjct: 97  GNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYN 156

Query: 129 RVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGA 188
           RV CN+ G  + F VD+GSNP+YFAVL++YE+GDG+L  ++L       +W PM+QSWGA
Sbjct: 157 RVPCNWGGVMLTFAVDAGSNPSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGA 216

Query: 189 VWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           VWKL + +ALQ P S+RLT+  SGKT+VA+NVIP GW+PG +Y S VN+
Sbjct: 217 VWKLSAGAALQAPLSIRLTS-SSGKTLVASNVIPSGWKPGASYTSTVNY 264

[Close]
BLAST of Carg17681 vs. Swiss-Prot
Match: sp|Q6H676|EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-78
Identity = 141/231 (61.04%), Postives = 173/231 (74.89%), Query Frame = 0 

Query: 9   WSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCS 68
           W+ A AT+YG PNG GSDGG+CGY  AV + PFSS+IAAG PSLYK GK CGACY+VKC+
Sbjct: 64  WAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCT 123

Query: 69  GEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHK 128
              ACSG P TVVITD CPGG C + + HFD+SGT+ GAMA  G AD+LR+ G+L +Q++
Sbjct: 124 TNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYR 183

Query: 129 RVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGA 188
           RV C Y G +I F VD G+NP YF VLIE+EDGDG+L  V+L  A     W PM Q+WGA
Sbjct: 184 RVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEA--GCGWTPMVQNWGA 243

Query: 189 VWKLDS--ASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           +W+ +S    AL+ PFSLRLT+ DSGK +VANNVIP  W+PG TYRS+VN+
Sbjct: 244 LWRYNSNTGKALKAPFSLRLTS-DSGKVLVANNVIPASWKPGVTYRSLVNY 291

[Close]
BLAST of Carg17681 vs. Swiss-Prot
Match: sp|Q10G40|EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB12 PE=2 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 6.2e-78
Identity = 141/235 (60.00%), Postives = 173/235 (73.62%), Query Frame = 0 

Query: 9   WSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCS 68
           WS  IATWYG PNGAGS+GG+CGY  AV++PPFSS IAAG P +Y SGK CG+CY+V C+
Sbjct: 39  WSNGIATWYGDPNGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCA 98

Query: 69  GEGACSGSPVTVVITDSCPG---------GSCASDSVHFDLSGTAFGAMAATGRADELRS 128
           G  ACSG PVTVVITD  PG         G C +++ HFD+SGTAFGAMA  G+AD+LR 
Sbjct: 99  GNEACSGIPVTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRG 158

Query: 129 LGVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKP--ALNSY 188
            G+L IQ+ RVEC + G  + F+VDSGSNPNY A+L+EY+D D +L  V++ P  A  S 
Sbjct: 159 AGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASG 218

Query: 189 SWIPMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYR 233
           SWIPM+QSWGAVW+L+S SALQ PFS+RLT   SG+  VA+N IP GW PG  Y+
Sbjct: 219 SWIPMQQSWGAVWRLNSGSALQGPFSVRLT-FSSGQMFVASNAIPAGWNPGMAYQ 272

[Close]
BLAST of Carg17681 vs. TrEMBL
Match: tr|A0A1S3AUH4|A0A1S3AUH4_CUCME (putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.2e-120
Identity = 212/238 (89.08%), Postives = 224/238 (94.12%), Query Frame = 0 

Query: 2   YQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGA 61
           YQSYD DWSPA+ATWYG P+GAGSDGGSCGYGKAVE+PPFSS IAAGGPSLYK+G+ACGA
Sbjct: 33  YQSYDSDWSPAVATWYGPPDGAGSDGGSCGYGKAVEQPPFSSFIAAGGPSLYKNGQACGA 92

Query: 62  CYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLG 121
           CYQVKCSGE ACSG+PVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRA+ELRSLG
Sbjct: 93  CYQVKCSGESACSGNPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRAEELRSLG 152

Query: 122 VLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKP-ALNSYSWI 181
           VLHIQHKRVECNYPGTSINFIVDSGSN NYFA LIEYEDGDGELG VELK  AL+S SWI
Sbjct: 153 VLHIQHKRVECNYPGTSINFIVDSGSNSNYFAALIEYEDGDGELGSVELKQGALDSNSWI 212

Query: 182 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFD 239
           PMK+SWGAVWKLD  SALQ PFSLRLTAL+SGKTVVANNVIP GWQPG++YRSVVNFD
Sbjct: 213 PMKRSWGAVWKLDYGSALQAPFSLRLTALESGKTVVANNVIPAGWQPGKSYRSVVNFD 270

[Close]
BLAST of Carg17681 vs. TrEMBL
Match: tr|A0A0A0L8B4|A0A0A0L8B4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 6.3e-120
Identity = 213/238 (89.50%), Postives = 223/238 (93.70%), Query Frame = 0 

Query: 2   YQSYDPDWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGA 61
           YQS D DWSPA+ATWYG P+GAGSDGGSCGYGKAVE+PPFSS IAAGGPSLYK G+ACGA
Sbjct: 33  YQSDDSDWSPAVATWYGPPDGAGSDGGSCGYGKAVEQPPFSSFIAAGGPSLYKYGQACGA 92

Query: 62  CYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLG 121
           CYQVKCSGEGACSG+PVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRA+ELRSLG
Sbjct: 93  CYQVKCSGEGACSGNPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRAEELRSLG 152

Query: 122 VLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKP-ALNSYSWI 181
           VLHIQHKRVECNYPGTSINFIVDSGSN NYFA LIEYEDGDGELG VELK  A++S SWI
Sbjct: 153 VLHIQHKRVECNYPGTSINFIVDSGSNSNYFAALIEYEDGDGELGSVELKQGAVDSNSWI 212

Query: 182 PMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFD 239
           PMKQSWGAVWKLDS SALQ PFSLRLTALDSGKTVVANNVIP GWQ G++YRSVVNFD
Sbjct: 213 PMKQSWGAVWKLDSGSALQAPFSLRLTALDSGKTVVANNVIPAGWQAGKSYRSVVNFD 270

[Close]
BLAST of Carg17681 vs. TrEMBL
Match: tr|A0A059C4J7|A0A059C4J7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01625 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.9e-102
Identity = 173/230 (75.22%), Postives = 201/230 (87.39%), Query Frame = 0 

Query: 8   DWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKC 67
           DWSPA ATWYG+PNGAGSDGG+CGYG  V++ PFSS+++AGGPSL+KSGK CGACYQVKC
Sbjct: 42  DWSPAGATWYGSPNGAGSDGGACGYGNGVDQAPFSSMVSAGGPSLFKSGKGCGACYQVKC 101

Query: 68  SGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQH 127
           +   ACSG+PVTVVITD CPGG C ++S HFDLSGTAFGAMA+ G+ADELR+ GVL IQ+
Sbjct: 102 TENAACSGNPVTVVITDECPGGPCVAESTHFDLSGTAFGAMASPGKADELRNAGVLQIQY 161

Query: 128 KRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWG 187
           ++VECN+PG  + F VDSGSNPNYFA LIEYEDGDGELG V LK AL+S SW+PM+QSWG
Sbjct: 162 QKVECNFPGAKVAFHVDSGSNPNYFAALIEYEDGDGELGAVNLKQALDSDSWLPMQQSWG 221

Query: 188 AVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           AVWKLD A  L+ PFS++LT+LDSGKT+VANNVIP GWQPGQTYRSVVNF
Sbjct: 222 AVWKLDGAGQLRAPFSIKLTSLDSGKTLVANNVIPAGWQPGQTYRSVVNF 271

[Close]
BLAST of Carg17681 vs. TrEMBL
Match: tr|A0A059C4P0|A0A059C4P0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01615 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.0e-101
Identity = 172/230 (74.78%), Postives = 202/230 (87.83%), Query Frame = 0 

Query: 8   DWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKC 67
           DWSPA ATWYG+PNGAGSDGG+CGYG  V++ PFSS+++AGGPSL+KSGK CGACYQVKC
Sbjct: 42  DWSPAGATWYGSPNGAGSDGGACGYGSGVDQAPFSSMVSAGGPSLFKSGKGCGACYQVKC 101

Query: 68  SGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQH 127
           +   ACSG+PVTVVITD CPGG C ++S HFDLSGTAFGAMA++G+ADELR+ GVL IQ+
Sbjct: 102 TENAACSGNPVTVVITDECPGGPCVAESAHFDLSGTAFGAMASSGKADELRNAGVLQIQY 161

Query: 128 KRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWG 187
           ++V+CN+PG  + F VDSGSNPNYFA LIEYEDGDGELG V LK AL+S SW+PM+QSWG
Sbjct: 162 QKVKCNFPGAKVAFHVDSGSNPNYFAALIEYEDGDGELGAVNLKQALDSDSWLPMQQSWG 221

Query: 188 AVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           AVWKLD A  L+ PFS++LT+LDSGKT+VANNVIP GWQPGQTYRSVVNF
Sbjct: 222 AVWKLDGAGQLRAPFSIKLTSLDSGKTLVANNVIPAGWQPGQTYRSVVNF 271

[Close]
BLAST of Carg17681 vs. TrEMBL
Match: tr|A0A059C5E7|A0A059C5E7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01620 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.3e-101
Identity = 172/230 (74.78%), Postives = 201/230 (87.39%), Query Frame = 0 

Query: 8   DWSPAIATWYGTPNGAGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKC 67
           DWSPA ATWYG+PNGAGSDGG+CGYG  V + PFSS+++AGGPSL+KSGK CGACYQVKC
Sbjct: 42  DWSPAGATWYGSPNGAGSDGGACGYGSGVAQAPFSSMVSAGGPSLFKSGKGCGACYQVKC 101

Query: 68  SGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQH 127
           +   ACSG+PVTVVITD CPGG C ++S HFDLSGTAFGAMA++G+ADELR+ GVL IQ+
Sbjct: 102 TENAACSGNPVTVVITDECPGGPCVAESAHFDLSGTAFGAMASSGKADELRNAGVLQIQY 161

Query: 128 KRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWG 187
           ++V+CN+PG  + F VDSGSNPNYFA LIEYEDGDGELG V LK AL+S SW+PM+QSWG
Sbjct: 162 QKVKCNFPGAKVAFHVDSGSNPNYFAALIEYEDGDGELGAVNLKQALDSDSWLPMQQSWG 221

Query: 188 AVWKLDSASALQPPFSLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNF 238
           AVWKLD A  L+ PFS++LT+LDSGKT+VANNVIP GWQPGQTYRSVVNF
Sbjct: 222 AVWKLDGAGQLRAPFSIKLTSLDSGKTLVANNVIPAGWQPGQTYRSVVNF 271

The following BLAST results are available for this feature:
BLAST of Carg17681 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924767.14.3e-13699.16putative expansin-B2 [Cucurbita moschata][more]
XP_023528384.12.1e-13598.74putative expansin-B2 [Cucurbita pepo subsp. pepo][more]
XP_022979601.11.7e-13297.49putative expansin-B2 [Cucurbita maxima][more]
XP_008437785.13.3e-12089.08PREDICTED: putative expansin-B2 [Cucumis melo][more]
XP_004133769.19.5e-12089.50PREDICTED: putative expansin-B2 [Cucumis sativus] >KGN56356.1 hypothetical prote... [more]
BLAST of Carg17681 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65680.13.1e-8865.09expansin B2[more]
AT2G45110.19.6e-7456.95expansin B4[more]
AT1G65681.11.8e-6452.78beta expansin 6[more]
AT4G28250.11.9e-5845.41expansin B3[more]
AT2G20750.12.9e-5445.65expansin B1[more]
BLAST of Carg17681 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SHY6|EXPB2_ARATH5.6e-8765.09Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2[more]
sp|Q7XT40|EXB15_ORYSJ8.0e-8665.94Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2[more]
sp|Q5W6Z9|EXB18_ORYSJ6.8e-8564.19Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1[more]
sp|Q6H676|EXB11_ORYSJ3.6e-7861.04Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1[more]
sp|Q10G40|EXB12_ORYSJ6.2e-7860.00Expansin-B12 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB12 PE=2 SV=2[more]
BLAST of Carg17681 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUH4|A0A1S3AUH4_CUCME2.2e-12089.08putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1[more]
tr|A0A0A0L8B4|A0A0A0L8B4_CUCSA6.3e-12089.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1[more]
tr|A0A059C4J7|A0A059C4J7_EUCGR5.9e-10275.22Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01625 PE=3 SV... [more]
tr|A0A059C4P0|A0A059C4P0_EUCGR1.0e-10174.78Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01615 PE=3 SV... [more]
tr|A0A059C5E7|A0A059C5E7_EUCGR2.3e-10174.78Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01620 PE=3 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0019953sexual reproduction
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR007117Expansin_CBD
IPR009009RlpA-like_DPBB
IPR036749Expansin_CBD_sf
IPR036908RlpA-like_sf
IPR007112Expansin/allergen_DPBB_dom
IPR005795LolPI
IPR007118Expan_Lol_pI
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019953 sexual reproduction
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17681-RACarg17681-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 120..136
score: 33.68
coord: 26..44
score: 32.76
coord: 219..233
score: 48.5
coord: 8..23
score: 42.97
coord: 179..193
score: 43.0
coord: 49..67
score: 40.92
IPR005795Major pollen allergen Lol pIPRINTSPR00829LOLP1ALLERGNcoord: 109..124
score: 39.2
coord: 87..102
score: 36.36
coord: 47..58
score: 29.55
coord: 157..172
score: 36.93
coord: 141..156
score: 60.8
coord: 188..205
score: 43.43
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 45..127
e-value: 5.2E-5
score: 32.7
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 27..137
score: 30.476
IPR036908RlpA-like domain superfamilyGENE3DG3DSA:2.40.40.10coord: 1..132
e-value: 9.6E-45
score: 154.0
IPR036908RlpA-like domain superfamilySUPERFAMILYSSF50685Barwin-like endoglucanasescoord: 8..157
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3DG3DSA:2.60.40.760coord: 133..234
e-value: 8.3E-37
score: 127.3
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILYSSF49590PHL pollen allergencoord: 138..233
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 46..122
e-value: 2.6E-17
score: 62.8
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 139..222
e-value: 4.5E-27
score: 93.8
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 150..233
score: 26.521
NoneNo IPR availablePANTHERPTHR31692:SF3BETA EXPANSIN 6-RELATEDcoord: 4..237
NoneNo IPR availablePANTHERPTHR31692FAMILY NOT NAMEDcoord: 4..237