Carg24016 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCCTGCTGTGTGGAAGTTATTCTATCTCTGACTTCGGCCTCCCTTCTTGTATTCTTCTGTAATAACTGGTTGATTTATATTCGTGTTAACTTTTTGGACTTCCAGTTTTCAGTAGTTCTCTTTATGGCTGTTTCCTGCTTGCAAATAATTTATCTAGTCTGGCTTCTCCAACTGGTAGGTTGTTCTGCTTAACCGTCGGCCTTTATCATGCTGACTCAATATGAATTATATGTACGGTCCGGCACTTGTGATTTGTGAAGTTAAACTTTCAGGATGACAGTATTTTCTGACTAGTTTGAGTTTGATAATTCTCTAGGAACCTCAGTTACATGAAATCCCTACTGTTTTAGTTTAAGGGAGTCATAGTTTTGACTTTTTCCTTGACCACAAAAATGGAAGGAACTTTTGCCATTTCGATGTTCTAGAGCTACATGGATACAATTTTCTTTTTGCACATAAGAACAAGAAGAAAAAAAAAAAAAAAAAAACTAATATATTCCCCCATTCAAAGAATGCTCTAGTATAAGAATTTGAGTTTTTCTAGTGATCAGTTTTAAAACTGCACAGGTTACTTGACATTCTTCTCCACAGGCTTTTCTGAAGGAAGATACTGCGTTAGACTTGTTATATTTGATGATCAATTTGGTGCATCGTTAATATGCTGTTCACCAGTTTTGTAACTCTTTTGTATGGATCAGGATTGAATTAGAGGTATGCCCTAAAAGGATAAGCATGTTTTATTGCTCTTATCGTCATGGAGGTTAGTTTGTTAATTTATTATAATGCTTATATAAACCCGGAGACGAAAAAACAGTGGACCAACAAGGCATGATAAGTATGTTGTCTTTTAATCTTTGATTGAATTGGAGGATGCTTCAGGTGTGTTGCATTTAATGTATATAGCCATGGTTAGCTGTTTTCTCAAATATTCATTCTTCTCTCAGGCGACAAAAGGTGACAGAGGCAAAATTTCTTGAAAAAGAAACAGCAAAAAGATTGGAAGAAGCAATTCGTAAGAAAGTCGAAGCGAGCCTGAACGACGATGACGTTAAGGTGGAAATTAACAGGAAGATGGAGGAGGGACGGAGAAGGCTTAACGAAGAAGTGGCAGCTCAACTTGAGAAGGAAAAGGAAGCTGCCCTTATCGAGGCCCAACGGAAAGAGGTACGTTCATTTCTTGGTTTCATTGGTTCGGTTCGATTTGGTTCGGGTAGATGTCTAAGAAGTAGTAGTTGGTTTTGTAGGAAGAAGCTAGAAAAGAGAAGGAAGAAGTAGAAAGGATGGTAGAGGAGAGGCGGAGGAGAGTAGAAGAGGCTCAGAGAAGTGAGGCTTTAGAGAGACAACAGAGGGAGGAGGAGAGATATAGGGAACTTGAAGAGCTACAAAGGAAGAAAGAAGAAGCCATTAAGAGGAAGAAACAGGAAGAAGAGGAACAGCGACTTAACCAGATGAAGCTTTTGGGTAAAAACAAATCACGCCCCAAATTGTCATTTGCCATTGGCTCTAAATAATCAAAATATTTGTCCAAAGTGAAGAAAAAAAAGTAAATGTTTAGTTTTCTTTTTAAGTCGTGAATTTGACTCGATTGTTCTCACTCACGTTCTAACACTTCGTGTAATTTGGGATGACATTTTTTTTTTT ATGAGCTCCTGCTGTGTGGAAGTTATTCTATCTCTGACTTCGGCCTCCCTTCTTGTATTCTTCTGTAATAACTGGTTGATTTATATTCGTGTTAACTTTTTGGACTTCCAGTTTTCAGTAGTTCTCTTTATGGCTGTTTCCTGCTTGCAAATAATTTATCTAGTCTGGCTTCTCCAACTGCCATGGTTAGCTGTTTTCTCAAATATTCATTCTTCTCTCAGGCGACAAAAGGTGACAGAGGCAAAATTTCTTGAAAAAGAAACAGCAAAAAGATTGGAAGAAGCAATTCGTAAGAAAGTCGAAGCGAGCCTGAACGACGATGACGTTAAGGTGGAAATTAACAGGAAGATGGAGGAGGGACGGAGAAGGCTTAACGAAGAAGTGGCAGCTCAACTTGAGAAGGAAAAGGAAGCTGCCCTTATCGAGGCCCAACGGAAAGAGGAAGAAGCTAGAAAAGAGAAGGAAGAAGTAGAAAGGATGGTAGAGGAGAGGCGGAGGAGAGTAGAAGAGGCTCAGAGAAGTGAGGCTTTAGAGAGACAACAGAGGGAGGAGGAGAGATATAGGGAACTTGAAGAGCTACAAAGGAAGAAAGAAGAAGCCATTAAGAGGAAGAAACAGGAAGAAGAGGAACAGCGACTTAACCAGATGAAGCTTTTGGGTAAAAACAAATCACGCCCCAAATTGTCATTTGCCATTGGCTCTAAATAATCAAAATATTTGTCCAAAGTGAAGAAAAAAAAGTAAATGTTTAGTTTTCTTTTTAAGTCGTGAATTTGACTCGATTGTTCTCACTCACGTTCTAACACTTCGTGTAATTTGGGATGACATTTTTTTTTTT ATGAGCTCCTGCTGTGTGGAAGTTATTCTATCTCTGACTTCGGCCTCCCTTCTTGTATTCTTCTGTAATAACTGGTTGATTTATATTCGTGTTAACTTTTTGGACTTCCAGTTTTCAGTAGTTCTCTTTATGGCTGTTTCCTGCTTGCAAATAATTTATCTAGTCTGGCTTCTCCAACTGCCATGGTTAGCTGTTTTCTCAAATATTCATTCTTCTCTCAGGCGACAAAAGGTGACAGAGGCAAAATTTCTTGAAAAAGAAACAGCAAAAAGATTGGAAGAAGCAATTCGTAAGAAAGTCGAAGCGAGCCTGAACGACGATGACGTTAAGGTGGAAATTAACAGGAAGATGGAGGAGGGACGGAGAAGGCTTAACGAAGAAGTGGCAGCTCAACTTGAGAAGGAAAAGGAAGCTGCCCTTATCGAGGCCCAACGGAAAGAGGAAGAAGCTAGAAAAGAGAAGGAAGAAGTAGAAAGGATGGTAGAGGAGAGGCGGAGGAGAGTAGAAGAGGCTCAGAGAAGTGAGGCTTTAGAGAGACAACAGAGGGAGGAGGAGAGATATAGGGAACTTGAAGAGCTACAAAGGAAGAAAGAAGAAGCCATTAAGAGGAAGAAACAGGAAGAAGAGGAACAGCGACTTAACCAGATGAAGCTTTTGGGTAAAAACAAATCACGCCCCAAATTGTCATTTGCCATTGGCTCTAAATAA MSSCCVEVILSLTSASLLVFFCNNWLIYIRVNFLDFQFSVVLFMAVSCLQIIYLVWLLQLPWLAVFSNIHSSLRRQKVTEAKFLEKETAKRLEEAIRKKVEASLNDDDVKVEINRKMEEGRRRLNEEVAAQLEKEKEAALIEAQRKEEEARKEKEEVERMVEERRRRVEEAQRSEALERQQREEERYRELEELQRKKEEAIKRKKQEEEEQRLNQMKLLGKNKSRPKLSFAIGSK
BLAST of Carg24016 vs. NCBI nr
Match: XP_022927717.1 (uncharacterized protein At1g10890-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Carg24016 vs. NCBI nr
Match: XP_022927716.1 (uncharacterized protein At1g10890-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Carg24016 vs. NCBI nr
Match: XP_022927714.1 (uncharacterized protein At1g10890-like isoform X1 [Cucurbita moschata] >XP_022927715.1 uncharacterized protein At1g10890-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Carg24016 vs. NCBI nr
Match: XP_023529908.1 (uncharacterized protein At1g10890-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13 Identity = 150/156 (96.15%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of Carg24016 vs. NCBI nr
Match: XP_023529909.1 (uncharacterized protein At1g10890-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 71.2 bits (173), Expect = 5.1e-09 Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of Carg24016 vs. TrEMBL
Match: tr|A0A1D6QI07|A0A1D6QI07_MAIZE (Uncharacterized protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d052620 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08 Identity = 36/55 (65.45%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Carg24016 vs. TrEMBL
Match: tr|A0A1D6F6D9|A0A1D6F6D9_MAIZE (Uncharacterized protein OS=Zea mays OX=4577 GN=100286281 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.1e-06 Identity = 31/53 (58.49%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Carg24016 vs. TrEMBL
Match: tr|M5XQS3|M5XQS3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa018653mg PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.6e-06 Identity = 116/162 (71.60%), Postives = 127/162 (78.40%), Query Frame = 0
BLAST of Carg24016 vs. TrEMBL
Match: tr|A0A1D6F6E4|A0A1D6F6E4_MAIZE (Uncharacterized protein OS=Zea mays OX=4577 GN=100286281 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.8e-06 Identity = 32/64 (50.00%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Carg24016 vs. TrEMBL
Match: tr|A0A1D6F6E0|A0A1D6F6E0_MAIZE (Uncharacterized protein OS=Zea mays OX=4577 GN=100286281 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.8e-06 Identity = 32/64 (50.00%), Postives = 49/64 (76.56%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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