Carg23886 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCGGCGAGCTTCCCGACTTAGGGGAATCTTACCTCTCTGGTCCATTCTCCAACGCTTAACCATCGCCGTCTTTACTCACTTCTCTCTTCTTTTCAGAATCCGCCCGAGCCCTGCTCATCCCCGGCGGCGGCATCCAACTCACCACCGCCATTCTCGACTGCCTCCCCGCGCTCAAGCTCGTCGTCACTACCAGCACTGGCCTCGACCACCTCGACTTGCCGGAATTACGCCGCCGTGAAATCGCTATCGCCTATGCTGGAAACTTGTTCACTCAAGATGTCGCCGATTTAGCGGTTGGATTACTGATCGATGTTCTTATGAAAGTTTCGGCTGGTGATCGGTTCGTGAAGCAGGGGATTTGGCCTTCCAAACGGAAATTTTCCCTCGGATTAAAGGTCCTATTATTTATTTATTTTTAAAAGCTAAAGCATTTTAAATTTTGTTTAAATAAAAAAAATATATAGTTAGTTCTAAAAATACCCTTAAAAATAAACTTTAGTTAGAGTTTTTAAAAATAATAATAAAAAAAATAAGTTAGTATACAGATGAAAACCATTTATATCTCCATTTTTAATTTTAAGGTAGTTTTAAAAATTCCTAGGTATTTTTTAAACTGTACGACACGTCTATCTACGCCTAGTGTATTAGAGTATTAACGGTTGTTATTTTTAGAAACTCCTAGGTATTTTTGGAACACGTCTAATCTGTCTATCTACACCTCGTGTATCAGGGTAGTAACGGATGTTATTTTTTAAAATACCTAGGTATTTTTGAAACACATATGACTCGTCTATCTACACTTGGTGTATTACGGTATTAACAGTTGTTATTTTTTAGAACTCTTAGGTATTTTTGAAACACGTCTAATGTGTCTATCTACACCTCGTGTATTAGGGTACTAACGGGTGTTATTTTTAAAAATTTATAGGTATTTTTGTAACACGTATGACCCGTCTATCTACACCTGGTGTATTAGTGTATTAATCGTTGTTATTTTTGAAAACTCCTAGGTATTTTTTAAACACGTCTAATCCGTCTATCTACACCTCGTGTATTAGGGTACTGATGTCTGTCTATCTACACCTAACCTCATGTATTAGGGTACTAATGCCTGTCTATATATACACCTCATGTATTAGGGTACTAGTGCCTGTCTATCTACACCTCATGTATTAGGGTACTAAAGAGAGTTATTTTTTAAATATGTATCTGTCTATTTACAAACGCCTGTCTATCTATACTTCATGTATTAGGGTACTAACGTCGGTCTATCTACACCTCATGTATTAGGGTACTAACGTCGGTCTATCTACACCTCATGTGTCTGTCTATCTACACCTCATGTATTAGGGTACTAACGTCGGTCTATCTACACCTCATGTGTCTGTCTATGTACACCTCATGTATTAGGGTACTAACGTCGGTCTATCTACACCTCATGTATCAGGGTACTAACGCCAGTCTATCTACACCTCATGTATTAGGGTACTAACGCCTGTCTATCTACACCTCATGTATCAGGGTACTAACGCCAGTCTATCTACACCTCATGTGTCTGTCTATCTACACCTCATGTATTAGGGTACTAACGATTGTTATTTTTTAAAATTTCTAGGTATTTTTGAAACACGTCTAACCCGTCTATCTACACCTCGTGTACTAGGGTACCAACGGTTGTTATTTCTTAAAAATCTTAGGTATTTTTGAAACACATCTAACTTGTCTATCTAGACCTCATATATTAAGATATTTTTTTAACACGTCTAATCTGTCTTTCTACACCTCATGTATTAAGGTACTAACCATCCGAGACGTGGAATTTTAAATTTTAAATTTACTATCGAAAAATGACCGAAACATAAAATTTTAGTTCGTTCGAGTGATCTGATTACATAAATTCGGATGAGTTTTAAGGTTATAAATGATTTGACAGTTAAGCGGCAAGCAAATTGGGATAGTTGGATTGGGGAAAATAGGCACAGAAGTAGCCAAAAGGCTGGAGGGTTTTGGGTGCAGAATCTCATACAACTCAAGAACCAAAAAGCCATTAGTACCATACTCCTACTATTCCAATGTACATGAACTTGCAGCCAACTGTGAAGCCATCATCATTTGCTGCGGCTTAACGGCCGAAACCCGACATATGATCGACAGGGACGTGATGGTTGCGTTAGGCAAAGATGGAGTGATAGTCAACGTCGGCCGAGGGGCGATCGTCGACGAGACCGAGCTGGTTCGACGCTTGATTCAAGGGGAGCTTGGAGGAGCTGGGCTGGATGTGTTTGAGAATGAACCTGAAGTTCCTGAAGAGCTGTTTAATCTTGATAATGTTGTGTTGTCGCCTCATGTTGCTGTCTTAACAACTGAATCCATGGTGGGATTGACTCAATTGGTGACGGAGAATTTGGAGGCGTTTTTCTCGAACAAGCCTTTGGTGACTCCGTTCGAGGATTATTCGAGTTGAACGGTATAAAAATGTTCTTGAATTTTAGACGTTTGTTGTAGATTATACTACTAGACCTTTAAAAGTTCCGTTTCAGTCATTGACGGGATCGTTTCAAACAGTTATTATTCTGTTGTAGATGATGTACTGTATGCTCACTACAACATATGCGAGATTTCGTGACTCGGGAA TTCCGGCGAGCTTCCCGACTTAGGGGAATCTTACCTCTCTGGTCCATTCTCCAACGCTTAACCATCGCCGTCTTTACTCACTTCTCTCTTCTTTTCAGAATCCGCCCGAGCCCTGCTCATCCCCGGCGGCGGCATCCAACTCACCACCGCCATTCTCGACTGCCTCCCCGCGCTCAAGCTCGTCGTCACTACCAGCACTGGCCTCGACCACCTCGACTTGCCGGAATTACGCCGCCGTGAAATCGCTATCGCCTATGCTGGAAACTTGTTCACTCAAGATGTCGCCGATTTAGCGGTTGGATTACTGATCGATGTTCTTATGAAAGTTTCGGCTGGTGATCGGTTCGTGAAGCAGGGGATTTGGCCTTCCAAACGGAAATTTTCCCTCGGATTAAAGTTAAGCGGCAAGCAAATTGGGATAGTTGGATTGGGGAAAATAGGCACAGAAGTAGCCAAAAGGCTGGAGGGTTTTGGGTGCAGAATCTCATACAACTCAAGAACCAAAAAGCCATTAGTACCATACTCCTACTATTCCAATGTACATGAACTTGCAGCCAACTGTGAAGCCATCATCATTTGCTGCGGCTTAACGGCCGAAACCCGACATATGATCGACAGGGACGTGATGGTTGCGTTAGGCAAAGATGGAGTGATAGTCAACGTCGGCCGAGGGGCGATCGTCGACGAGACCGAGCTGGTTCGACGCTTGATTCAAGGGGAGCTTGGAGGAGCTGGGCTGGATGTGTTTGAGAATGAACCTGAAGTTCCTGAAGAGCTGTTTAATCTTGATAATGTTGTGTTGTCGCCTCATGTTGCTGTCTTAACAACTGAATCCATGGTGGGATTGACTCAATTGGTGACGGAGAATTTGGAGGCGTTTTTCTCGAACAAGCCTTTGGTGACTCCGTTCGAGGATTATTCGAGTTGAACGGTATAAAAATGTTCTTGAATTTTAGACGTTTGTTGTAGATTATACTACTAGACCTTTAAAAGTTCCGTTTCAGTCATTGACGGGATCGTTTCAAACAGTTATTATTCTGTTGTAGATGATGTACTGTATGCTCACTACAACATATGCGAGATTTCGTGACTCGGGAA ATGAAAGTTTCGGCTGGTGATCGGTTCGTGAAGCAGGGGATTTGGCCTTCCAAACGGAAATTTTCCCTCGGATTAAAGTTAAGCGGCAAGCAAATTGGGATAGTTGGATTGGGGAAAATAGGCACAGAAGTAGCCAAAAGGCTGGAGGGTTTTGGGTGCAGAATCTCATACAACTCAAGAACCAAAAAGCCATTAGTACCATACTCCTACTATTCCAATGTACATGAACTTGCAGCCAACTGTGAAGCCATCATCATTTGCTGCGGCTTAACGGCCGAAACCCGACATATGATCGACAGGGACGTGATGGTTGCGTTAGGCAAAGATGGAGTGATAGTCAACGTCGGCCGAGGGGCGATCGTCGACGAGACCGAGCTGGTTCGACGCTTGATTCAAGGGGAGCTTGGAGGAGCTGGGCTGGATGTGTTTGAGAATGAACCTGAAGTTCCTGAAGAGCTGTTTAATCTTGATAATGTTGTGTTGTCGCCTCATGTTGCTGTCTTAACAACTGAATCCATGGTGGGATTGACTCAATTGGTGACGGAGAATTTGGAGGCGTTTTTCTCGAACAAGCCTTTGGTGACTCCGTTCGAGGATTATTCGAGTTGA MKVSAGDRFVKQGIWPSKRKFSLGLKLSGKQIGIVGLGKIGTEVAKRLEGFGCRISYNSRTKKPLVPYSYYSNVHELAANCEAIIICCGLTAETRHMIDRDVMVALGKDGVIVNVGRGAIVDETELVRRLIQGELGGAGLDVFENEPEVPEELFNLDNVVLSPHVAVLTTESMVGLTQLVTENLEAFFSNKPLVTPFEDYSS
BLAST of Carg23886 vs. NCBI nr
Match: XP_022950894.1 (glyoxylate/hydroxypyruvate reductase HPR3-like [Cucurbita moschata]) HSP 1 Score: 399.4 bits (1025), Expect = 7.1e-108 Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg23886 vs. NCBI nr
Match: XP_023539654.1 (glyoxylate/hydroxypyruvate reductase HPR3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.3 bits (1004), Expect = 1.9e-105 Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Carg23886 vs. NCBI nr
Match: XP_022974172.1 (glyoxylate/hydroxypyruvate reductase HPR3-like [Cucurbita maxima]) HSP 1 Score: 384.0 bits (985), Expect = 3.1e-103 Identity = 190/201 (94.53%), Postives = 198/201 (98.51%), Query Frame = 0
BLAST of Carg23886 vs. NCBI nr
Match: XP_022974170.1 (glyoxylate/hydroxypyruvate reductase HPR3-like [Cucurbita maxima]) HSP 1 Score: 352.4 bits (903), Expect = 9.9e-94 Identity = 172/197 (87.31%), Postives = 187/197 (94.92%), Query Frame = 0
BLAST of Carg23886 vs. NCBI nr
Match: XP_022943936.1 (glyoxylate/hydroxypyruvate reductase HPR3-like [Cucurbita moschata]) HSP 1 Score: 350.9 bits (899), Expect = 2.9e-93 Identity = 172/197 (87.31%), Postives = 186/197 (94.42%), Query Frame = 0
BLAST of Carg23886 vs. TAIR10
Match: AT2G45630.2 (D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 243.8 bits (621), Expect = 9.0e-65 Identity = 120/196 (61.22%), Postives = 153/196 (78.06%), Query Frame = 0
BLAST of Carg23886 vs. TAIR10
Match: AT1G12550.1 (D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64 Identity = 113/197 (57.36%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Carg23886 vs. TAIR10
Match: AT1G79870.1 (D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 210.7 bits (535), Expect = 8.5e-55 Identity = 105/190 (55.26%), Postives = 132/190 (69.47%), Query Frame = 0
BLAST of Carg23886 vs. TAIR10
Match: AT5G28310.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-27 Identity = 73/170 (42.94%), Postives = 92/170 (54.12%), Query Frame = 0
BLAST of Carg23886 vs. TAIR10
Match: AT4G34200.1 (D-3-phosphoglycerate dehydrogenase) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19 Identity = 67/212 (31.60%), Postives = 100/212 (47.17%), Query Frame = 0
BLAST of Carg23886 vs. Swiss-Prot
Match: sp|Q9LE33|HPR3_ARATH (Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana OX=3702 GN=HPR3 PE=2 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 4.7e-63 Identity = 113/197 (57.36%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Carg23886 vs. Swiss-Prot
Match: sp|Q65CJ7|HPPR_PLESU (Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides OX=4142 GN=HPPR PE=1 SV=2) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53 Identity = 106/190 (55.79%), Postives = 137/190 (72.11%), Query Frame = 0
BLAST of Carg23886 vs. Swiss-Prot
Match: sp|Q9CA90|HPR2_ARATH (Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana OX=3702 GN=HPR2 PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.5e-53 Identity = 105/190 (55.26%), Postives = 132/190 (69.47%), Query Frame = 0
BLAST of Carg23886 vs. Swiss-Prot
Match: sp|O58320|GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=gyaR PE=1 SV=2) HSP 1 Score: 149.1 bits (375), Expect = 5.4e-35 Identity = 80/193 (41.45%), Postives = 117/193 (60.62%), Query Frame = 0
BLAST of Carg23886 vs. Swiss-Prot
Match: sp|Q5FTU6|2KGR_GLUOX (2-ketogluconate reductase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=GOX0417 PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34 Identity = 76/194 (39.18%), Postives = 112/194 (57.73%), Query Frame = 0
BLAST of Carg23886 vs. TrEMBL
Match: tr|A0A1S3AW95|A0A1S3AW95_CUCME (glyoxylate/hydroxypyruvate reductase HPR3-like OS=Cucumis melo OX=3656 GN=LOC103483323 PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 8.6e-86 Identity = 155/197 (78.68%), Postives = 181/197 (91.88%), Query Frame = 0
BLAST of Carg23886 vs. TrEMBL
Match: tr|A0A0A0L4C2|A0A0A0L4C2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124920 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 4.7e-84 Identity = 153/197 (77.66%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of Carg23886 vs. TrEMBL
Match: tr|A0A1S3AYM4|A0A1S3AYM4_CUCME (glyoxylate/hydroxypyruvate reductase HPR3-like OS=Cucumis melo OX=3656 GN=LOC103484170 PE=3 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 9.8e-82 Identity = 149/196 (76.02%), Postives = 173/196 (88.27%), Query Frame = 0
BLAST of Carg23886 vs. TrEMBL
Match: tr|A0A0A0L908|A0A0A0L908_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124900 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 6.4e-81 Identity = 149/196 (76.02%), Postives = 171/196 (87.24%), Query Frame = 0
BLAST of Carg23886 vs. TrEMBL
Match: tr|A0A0A0L7K6|A0A0A0L7K6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124910 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.4e-80 Identity = 149/198 (75.25%), Postives = 172/198 (86.87%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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