Carg23885 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23885
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myb family transcription factor family protein
Location	Cucurbita_argyrosperma_scaffold_252 : 43508 .. 48710 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACCATTCTTCACGCCGTCTCATCCTTCGTTGCAGGAGCGCAGGTGTCGCCGCTATCTCCTCCTCCATTTCAGTGCTGCCGCCGCCGTGTTTCTTCCGCAGCCTCCTCCTAGTGAGTTTCATTTGCACTGTCTACTCTCTTGTTGTCACTGGTATTCTCCCGAGTTACGTCTATGCTTTTCGTCTCTCCTGATGAACACAAATTAGAACTTGGCTAATGAAAGAATGGAGGATTTGTTTTTGTTTTTCTCTTTTCTTAATAGCAATAGTGAGTAGTTGTGAATAGCAACGAACAAAACCTCGCGGCAATATGCGTTTTCTTTTCGAACTGCCTTTTGCTTTGTTGCATATATCTATCAGTCGAGGCTATCTGTATATTTTTTTGATCTTGCTGAATAGATTTGTTGCAGATCTGGCAATCGAGGCTATCTGTATATTTCTTTGGTCTCTGCTGAAAATTGACATGTTGAAGTTTTCAGCATTTCTTCTTTATTTATCAGAGAATTGGTTGAAATAATCTGTCATTCAATTCTGTTCTAATTCCTAACTTGTAAGAGTTATTTGGATTGAACGAAGAACTTTTTATTTTTATAGATTGTAGTTGGATAGATTTATATATTCGTTGATTGTAGTTGGATAGAAGACAATTAGTTCTTCTTACTTTTTTATTTTTAAACTGAAATTGTCTCCCTCCTATTAACCAATGCGATCTCGCAACGCAAAACTGGGGAGTTCTTCCCTTAACACCGCCAAAGGTCAATGGAAAACCATTCTGAATTTCTGCTCCCTCATACATGATTGATTGACATACATAATTGGTGATGGAGCAAACACTTCCTTTTGGAAAGATATCTGGCCGAGGGAAGAAAATTTCCTTTTATTTTTATCTCTCTCTTAGTGAAGAAGGGGCAGTTAAAGATATGTGGCATGCTGAATCATGAAACCTTGGACTAAGAAGAAACCAGATAGATGTTGAGATTGAGGATTATGCACCCCTGCTGCAAAGTTTAGATTCGGTCACTCTATCACAAAGGATTAGCTAGTGCTTTTGGAAGTTGCAGCCAAATTGAACATTTACCATCAGCTCCCTTTTGCATGATCTTTCTCCTACAAATAGCAATGCTTCACCACAACTTTATTGAAACCAAGCTTTTATCGATAAAAATGAAAGAATAACAAGCTTGTCAGTTGAGAAACTGAGCTTAGGGTAGTGATATGGAAAGATCGACCCGAAGAAACCCGGAAACTCTCCTACAAGGCCATCAACACGAATGACAAGTTTCAAAGAAGGATGCCTCACTTGGAATCTATCTCCACACTGGTGTTCTACTTGCAAACATAGTACAGAAACACAACCTCACCTCCTGATTAATTGTGAATTTGCAAAGGCATTCTGGAACCATTTACTGTTAATCTTTCAATGGCAAACAACACTGCCAGATGATCTTAAGCTACTTCTCTCGCTTACTTTAGGAGGTCATCCCTCCAAAAGAGATAAGAAGCATCTTTGGTAGAATTTTATTAGTGCATATTTCTGGAACATTTGGGAGAATTTTCCAGGATAAGGAATACTCCTTTAGTAGGTTTTTGATGCTATAGTTAACAGGGTTGTGGCTTGATGAAGATGTTCTCTTCTTTCTCATCACATCACAATCTCCCTCCTTTTCAATTGGAGAAATCTTTTGTAAATCTCCCTATAGAGGGTCTCTGCCTCTTTTGTAGTTTCATGTATCATTGAATTTTTTTCTTATAAAAAAATTTAAACAATGCAATAAACAATGTTTCTTCGAGTTTACTGGTAATAAGAGCTTGTCTATAGACTCTGTACTCATGTACTTGATTTACAAAGTTAAAGAAAATATTTAGGATAATTTGTCCCAAGTGTGGAGGGCTTAAAGGGAACCTAAAGATTCTCCATTTTCGACACTTTTATGTAAAGTATAGATAGATGTAGATGTAGATACATATCATTATTATTGTTGTTGTTGCTATTAGTTTTTACTTGCTCACACATTTATATTCTTGTATTAGATGACAACTCCAGAATTGTTTGCTCAAGATGAAGATGTGACTCATGACAAAATGCAGATGCAAAGGTCAGAAAAGACTAAGTGGCCTGATGTTCCAGATACAAAGAATGACGTAGAGAAGAAGAAAAAGAAGAGGAAGAAAGAACATAAAACCCATAAGAACGAGCAAAAAGAAGAGACAGAATCTGAGACAGAACCGTGGGCAAAGAATGAAGAAATAGAAACCGAGACAGAAACTTGCGTAAAGAAAGACAAGGAAATGGAAAAGCAAAAGAAGAAAAAAGCTAAGTTGTCTGAGGGCATTGATGGAGATAATTGTGAAAGAGGGTCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTATATATTAAGAAGGAGAAGAAGAAGAAGAAAACTAAGTATGTTGAGGGTGGATCACAAGAAAATGTTCATGAAGGAGGAGATGGATTGACAGAGAACGAGGACATTGGTGATCCCTCTGAAAGACTTTCTCCCAAGGGATCATCTAATTATGAAAGAGGGCCAGATGGAGGGAAGGAGAAGATGAAAAAGAAAAAGAAACAAAAAACTGAGGATTCTAAAGAAAGTTCTTCACATATTAAGGAGGAGAAAAAGAGGAAGAAAACCAAGTATGTTGAAGGTGGATCACAAGAAAAGGTTCATGGAGGAGGAACAGGATTGACGGAGAACGAGGACATTGGTGGTCCTTCTGAAAGACTTTCTCCTGACGAGGGATCATCTAATCGTAAACGAGGGCCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTACATATTAAGAACGAGAAGAAACTAAGAATGTTGAAGGTGCATCACAAGAGAAGGTTCGTGAAGGAGGAGCAGGATTGACAGAGAACGAGGACGTTGTTGGTCCTTCTGAACGACCTTCTCCCAAGGGATCATCTAAGAAAGTCAGATTTTCAGAAGATGTTGAGATTTTTCCAATAGCTGATGGCAAAAGTAGAAAAAAAACTAAGCAAGAAGATGATGGCAAAAGTAGAAAAAATACTAAGCAAGAAGATGATGGTTTAATAAGAGGCAAGCGGTTTTCCAAAGAAGAAGATGAGATAGTTAAAACGGCTGTCATGCAATACATTCATGAACACGGGCTTGGTGATGAAGGTCTCAAAAAGGTTCTTAAATGTAGGGAGTTTCCTGAACTGAAAAATTGTTGGAAGGACATAGGAAAATCCTTACCTTACAGACCTTATTTGAGTGTATACTATAGAGCTCACATCTTGTTTGAAAGGGACGAGTCGCGTAAATGGACACCCGAGGAATATGAAATTGTTCGTAAGTTTCACGAAAAATATGGATCGGATTGGAAAGGATTGGCTGATGCTCTTGGAAAACATAGGTTTCATGTGAAAGATACATGGCGACGAATAAAACTCACCAATATGAAGAAAGGACGTTGGACACAAGACGAGTACCAGAAATTATTTGATCTAGTTAACACAGACCTGCGAAACAAGGCTTCCGAAGAAAAAATATCCAAGCACGGAATGCTACGTGACAACATCTGCTGGGGAGCAATTAGCGACAAGTTGGCCACGAGATCAAATGCTCTTTGCTGCATGAAATGGTATCGCCAGTTAACGTCACCAATGGTTGCTGAGGGTGATTGGGAAGATGTCGATGACTACCGACTTGTCGATGCTCTGTCCAACTTGGACGCTGTCTCCATCGAAGATGTGGAATGGGACCAACTGCTTGAGCATAGGGATGGTGATATATGTAGAAAGCGGTGGTCTCAAATGGTCAAACACATAGGTGATAATGGCAACAAGTCATTTTCTGAACAAGTTGAACTTCTCTCCAAGCGATATAGCATTGATGTACTTGAAGCAAGAGAAGCCTTTGATGATGCACCTATAGTTGATTAAGCAAAACATGGTTCAACGAGGAACTCATAGCTTGCTTTCATTGCATCTCCAAAGTCTTCCTGTTCTGTAAGTCGTTTTTTGTTGCTGCTTAATTTAATTTGTTAGTTACTACCATTGAAAGTAATAGGAGTTTTTTTTGTAGACCACAATTTCTCTAGTGAACATCTTTAATCTTGAGCTGGGCCTTTGGTTAAATTATGTTCTATAAGTTATCTTTTCATTGTTTTGATCAGACAATTTAGAAGTTTGAGACAGGAAATCTTAGGTAATATCTTGGAACCGTATGGTTGAAAGTGCATCCTTCTTGCATTTATAAATTGAAAGTTGGAAATAAGAACAATAAATAGGATCCTAATTTAAACCAATGGCCTTCTTTCTTCATCTTTTTCGCTTCTTATTTGATGTGCTGCCATTTCATTGTCAATGTTAGCAGGTCTTGAACTCTCGGTACTCGGAAAAGCTCTGTTTTTCGGCTTGTAATCGGGTAAGAGCTTCAGTGTGATCCCCATCCCTATGAGTAGTAGACCCGTCGCATGTTGTTCACTTAATGGCTTTGTGAATATCAAGTAAGATAGAAGTAATGTCACTGCCTTTCTAGCTGTTGTTATCTGTGACAGAATTCAATTGTTTTGAGGTGTTAGTAGGATCATAATAATTCAAAATTTCAATCCTATTCTCAATCATTAATAGTCCTAGGAAATTTAATGTAGACACGTCTTTTAAAGCCCCGTATGATGCATTTTGAAAATTGTGTTTATTTTCTCACATTTTCTCTACACAATCGCTTACCAAGAACAAAAAATCACACGGTTATCAAATGAGGCCTTAGATGTCGAGATTTCAAAGCGTTTTGAGACAATATTTTGAAAATTTAAGGATTAGAGAAAACTAATAGGAAAAAGTTCATGACTAAACTAGGACTTGGATTATAATTGAACAGATGCACTCAATTCGGTTCAATGATCATATCCTCTTTGGAATGCTGAAACTGAGAGGCATCATTTCTAAAAACGGATGAAAGAAAAAGCTATGGACATTTATGAGATGCTTGAAAGAGCATTGAAAACTCCATAACTTAGCACATGTAGGAGTGGCAAGTAAAGTGACATAGGTTTTAAGAAGTGAATATTTACCATGGCTGTGGTAGCTGCCCCAAATAGGGCAATGAGTGAAAGAACAGAGACTTGGCCTATGTAGGTTGCCA

mRNA sequence

TCCACCATTCTTCACGCCGTCTCATCCTTCGTTGCAGGAGCGCAGGTGTCGCCGCTATCTCCTCCTCCATTTCAGTGCTGCCGCCGCCGTGTTTCTTCCGCAGCCTCCTCCTAATGACAACTCCAGAATTGTTTGCTCAAGATGAAGATGTGACTCATGACAAAATGCAGATGCAAAGGTCAGAAAAGACTAAGTGGCCTGATGTTCCAGATACAAAGAATGACGTAGAGAAGAAGAAAAAGAAGAGGAAGAAAGAACATAAAACCCATAAGAACGAGCAAAAAGAAGAGACAGAATCTGAGACAGAACCGTGGGCAAAGAATGAAGAAATAGAAACCGAGACAGAAACTTGCGTAAAGAAAGACAAGGAAATGGAAAAGCAAAAGAAGAAAAAAGCTAAGTTACTTTCTCCCAAGGGATCATCTAATTATGAAAGAGGGCCAGATGGAGGGAAGGAGAAGATGAAAAAGAAAAAGAAACAAAAAACTGAGGATTCTAAAGAAAGTTCTTCACATATTAAGGAGGAGAAAAAGAGGAAGAAAACCAAGTATGTTGAAGGTGGATCACAAGAAAAGGTTCATGGAGGAGGAACAGGATTGACGGAGAACGAGGACATTGGTGGTCCTTCTGAAAGACTTTCTCCTGACGAGGGATCATCTAATCGTAAACGAGGGCCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTACATATTAAGAACGAGAAGAAACTAAGAATGTTGAAGGTTCGTGAAGGAGGAGCAGGATTGACAGAGAACGAGGACGTTGTTGGTCCTTCTGAACGACCTTCTCCCAAGGGATCATCTAAGAAAGTCAGATTTTCAGAAGATGTTGAGATTTTTCCAATAGCTGATGGCAAAAGTAGAAAAAAAACTAAGCAAGAAGATGATGGCAAAAGTAGAAAAAATACTAAGCAAGAAGATGATGGTTTAATAAGAGGCAAGCGGTTTTCCAAAGAAGAAGATGAGATAGTTAAAACGGCTGTCATGCAATACATTCATGAACACGGGCTTGGTGATGAAGGTCTCAAAAAGGTTCTTAAATGTAGGGAGTTTCCTGAACTGAAAAATTGTTGGAAGGACATAGGAAAATCCTTACCTTACAGACCTTATTTGAGTGTATACTATAGAGCTCACATCTTGTTTGAAAGGGACGAGTCGCGTAAATGGACACCCGAGGAATATGAAATTGTTCGTAAGTTTCACGAAAAATATGGATCGGATTGGAAAGGATTGGCTGATGCTCTTGGAAAACATAGGTTTCATGTGAAAGATACATGGCGACGAATAAAACTCACCAATATGAAGAAAGGACGTTGGACACAAGACGAGTACCAGAAATTATTTGATCTAGTTAACACAGACCTGCGAAACAAGGCTTCCGAAGAAAAAATATCCAAGCACGGAATGCTACGTGACAACATCTGCTGGGGAGCAATTAGCGACAAGTTGGCCACGAGATCAAATGCTCTTTGCTGCATGAAATGGTATCGCCAGTTAACGTCACCAATGGTTGCTGAGGGTGATTGGGAAGATGTCGATGACTACCGACTTGTCGATGCTCTGTCCAACTTGGACGCTGTCTCCATCGAAGATGTGGAATGGGACCAACTGCTTGAGCATAGGGATGGTGATATATGTAGAAAGCGGTGGTCTCAAATGGTCAAACACATAGGTGATAATGGCAACAAGTCATTTTCTGAACAAGTTGAACTTCTCTCCAAGCGATATAGCATTGATGTACTTGAAGCAAGAGAAGCCTTTGATGATGCACCTATAGTCTTGAACTCTCGGTACTCGGAAAAGCTCTGTTTTTCGGCTTGTAATCGGGTAAGAGCTTCAGTGTGATCCCCATCCCTATGAGTAGTAGACCCGTCGCATGTTGTTCACTTAATGGCTTTGTGAATATCAAGTAAGATAGAAGTAATGTCACTGCCTTTCTAGCTGTTGTTATCTGTGACAGAATTCAATTGTTTTGAGGTGTTAGTAGGATCATAATAATTCAAAATTTCAATCCTATTCTCAATCATTAATAGTCCTAGGAAATTTAATGTAGACACGTCTTTTAAAGCCCCGTATGATGCATTTTGAAAATTGTGTTTATTTTCTCACATTTTCTCTACACAATCGCTTACCAAGAACAAAAAATCACACGGTTATCAAATGAGGCCTTAGATGTCGAGATTTCAAAGCGTTTTGAGACAATATTTTGAAAATTTAAGGATTAGAGAAAACTAATAGGAAAAAGTTCATGACTAAACTAGGACTTGGATTATAATTGAACAGATGCACTCAATTCGGTTCAATGATCATATCCTCTTTGGAATGCTGAAACTGAGAGGCATCATTTCTAAAAACGGATGAAAGAAAAAGCTATGGACATTTATGAGATGCTTGAAAGAGCATTGAAAACTCCATAACTTAGCACATGTAGGAGTGGCAAGTAAAGTGACATAGGTTTTAAGAAGTGAATATTTACCATGGCTGTGGTAGCTGCCCCAAATAGGGCAATGAGTGAAAGAACAGAGACTTGGCCTATGTAGGTTGCCA

Coding sequence (CDS)

ATGACAACTCCAGAATTGTTTGCTCAAGATGAAGATGTGACTCATGACAAAATGCAGATGCAAAGGTCAGAAAAGACTAAGTGGCCTGATGTTCCAGATACAAAGAATGACGTAGAGAAGAAGAAAAAGAAGAGGAAGAAAGAACATAAAACCCATAAGAACGAGCAAAAAGAAGAGACAGAATCTGAGACAGAACCGTGGGCAAAGAATGAAGAAATAGAAACCGAGACAGAAACTTGCGTAAAGAAAGACAAGGAAATGGAAAAGCAAAAGAAGAAAAAAGCTAAGTTACTTTCTCCCAAGGGATCATCTAATTATGAAAGAGGGCCAGATGGAGGGAAGGAGAAGATGAAAAAGAAAAAGAAACAAAAAACTGAGGATTCTAAAGAAAGTTCTTCACATATTAAGGAGGAGAAAAAGAGGAAGAAAACCAAGTATGTTGAAGGTGGATCACAAGAAAAGGTTCATGGAGGAGGAACAGGATTGACGGAGAACGAGGACATTGGTGGTCCTTCTGAAAGACTTTCTCCTGACGAGGGATCATCTAATCGTAAACGAGGGCCAGATGGAGGGAAGGAGAAGAAGAAAAAGAAACAAAAAACTGAGGATTCTAGAGACAATTCTTTACATATTAAGAACGAGAAGAAACTAAGAATGTTGAAGGTTCGTGAAGGAGGAGCAGGATTGACAGAGAACGAGGACGTTGTTGGTCCTTCTGAACGACCTTCTCCCAAGGGATCATCTAAGAAAGTCAGATTTTCAGAAGATGTTGAGATTTTTCCAATAGCTGATGGCAAAAGTAGAAAAAAAACTAAGCAAGAAGATGATGGCAAAAGTAGAAAAAATACTAAGCAAGAAGATGATGGTTTAATAAGAGGCAAGCGGTTTTCCAAAGAAGAAGATGAGATAGTTAAAACGGCTGTCATGCAATACATTCATGAACACGGGCTTGGTGATGAAGGTCTCAAAAAGGTTCTTAAATGTAGGGAGTTTCCTGAACTGAAAAATTGTTGGAAGGACATAGGAAAATCCTTACCTTACAGACCTTATTTGAGTGTATACTATAGAGCTCACATCTTGTTTGAAAGGGACGAGTCGCGTAAATGGACACCCGAGGAATATGAAATTGTTCGTAAGTTTCACGAAAAATATGGATCGGATTGGAAAGGATTGGCTGATGCTCTTGGAAAACATAGGTTTCATGTGAAAGATACATGGCGACGAATAAAACTCACCAATATGAAGAAAGGACGTTGGACACAAGACGAGTACCAGAAATTATTTGATCTAGTTAACACAGACCTGCGAAACAAGGCTTCCGAAGAAAAAATATCCAAGCACGGAATGCTACGTGACAACATCTGCTGGGGAGCAATTAGCGACAAGTTGGCCACGAGATCAAATGCTCTTTGCTGCATGAAATGGTATCGCCAGTTAACGTCACCAATGGTTGCTGAGGGTGATTGGGAAGATGTCGATGACTACCGACTTGTCGATGCTCTGTCCAACTTGGACGCTGTCTCCATCGAAGATGTGGAATGGGACCAACTGCTTGAGCATAGGGATGGTGATATATGTAGAAAGCGGTGGTCTCAAATGGTCAAACACATAGGTGATAATGGCAACAAGTCATTTTCTGAACAAGTTGAACTTCTCTCCAAGCGATATAGCATTGATGTACTTGAAGCAAGAGAAGCCTTTGATGATGCACCTATAGTCTTGAACTCTCGGTACTCGGAAAAGCTCTGTTTTTCGGCTTGTAATCGGGTAAGAGCTTCAGTGTGA

Protein sequence

MTTPELFAQDEDVTHDKMQMQRSEKTKWPDVPDTKNDVEKKKKKRKKEHKTHKNEQKEETESETEPWAKNEEIETETETCVKKDKEMEKQKKKKAKLLSPKGSSNYERGPDGGKEKMKKKKKQKTEDSKESSSHIKEEKKRKKTKYVEGGSQEKVHGGGTGLTENEDIGGPSERLSPDEGSSNRKRGPDGGKEKKKKKQKTEDSRDNSLHIKNEKKLRMLKVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEDDGKSRKNTKQEDDGLIRGKRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIVLNSRYSEKLCFSACNRVRASV

Homology

[Close]

BLAST of Carg23885 vs. NCBI nr
Match: XP_022939438.1 (RNA polymerase I termination factor [Cucurbita moschata])

HSP 1 Score: 684.1 bits (1764), Expect = 4.2e-193
Identity = 503/656 (76.68%), Postives = 505/656 (76.98%), Query Frame = 0


Query: 1   MTTPELFAQDEDVTHDKMQMQRSEKTKWPDVPDT-------------------------- 60
           MTTPELFAQDEDVTHDKMQMQRSEKTKWPD PD                           
Sbjct: 1   MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  -------------------------------------------------XXXXXXXXXXX 120
                                                            XXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGIDGDNCERGXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPKGSSN 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXX                         LSPKGSSN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXGSQENVHEGGDGLTENEDIGDPSERLSPKGSSN 180

Query: 181 YERGPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTEN 240
           YERGPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GLTEN
Sbjct: 181 YERGPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGGGIGLTEN 240

Query: 241 EDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSRDNSLHIKNE--------KKL 300
           EDI                XXXXXXXXXXXXXXXXXX                    +  
Sbjct: 241 EDIGGPSERLSPEGSSNRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGA 300

Query: 301 RMLKVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXX 360
              KV EGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXX
Sbjct: 301 SQEKVCEGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXX 360

Query: 361 XXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 420
           XXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC
Sbjct: 361 XXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 420

Query: 421 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 480
           WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK
Sbjct: 421 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 480

Query: 481 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG 540
           HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG
Sbjct: 481 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG 540

Query: 541 AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQL 574
           AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALS+LDAVSIEDVEWDQL
Sbjct: 541 AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSSLDAVSIEDVEWDQL 600

[Close]

BLAST of Carg23885 vs. NCBI nr
Match: XP_023539348.1 (RNA polymerase I termination factor [Cucurbita pepo subsp. pepo] >XP_023539349.1 RNA polymerase I termination factor [Cucurbita pepo subsp. pepo] >XP_023539350.1 RNA polymerase I termination factor [Cucurbita pepo subsp. pepo] >XP_023539351.1 RNA polymerase I termination factor [Cucurbita pepo subsp. pepo])

HSP 1 Score: 676.0 bits (1743), Expect = 1.2e-190
Identity = 348/353 (98.58%), Postives = 351/353 (99.43%), Query Frame = 0


Query: 221 KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXX 280
           KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXX
Sbjct: 302 KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXX 361

Query: 281 XXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKD 340
           XXXXXXXXXXXXXXRFSKEEDEIVK AVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKD
Sbjct: 362 XXXXXXXXXXXXXXRFSKEEDEIVKMAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKD 421

Query: 341 IGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRF 400
           IGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRF
Sbjct: 422 IGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRF 481

Query: 401 HVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAIS 460
           HVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNK SEEKISKHGMLRDNICWGAIS
Sbjct: 482 HVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKVSEEKISKHGMLRDNICWGAIS 541

Query: 461 DKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEH 520
           DKLATRSNALCCMKWYRQLTSPMVAEG+WEDVDDYRLVDALS+LDAVSIEDVEWDQLLEH
Sbjct: 542 DKLATRSNALCCMKWYRQLTSPMVAEGEWEDVDDYRLVDALSSLDAVSIEDVEWDQLLEH 601

Query: 521 RDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIV 574
           RDGDICRKRWSQM+KHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIV
Sbjct: 602 RDGDICRKRWSQMIKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIV 654

[Close]

BLAST of Carg23885 vs. NCBI nr
Match: XP_022974105.1 (RNA polymerase I termination factor [Cucurbita maxima])

HSP 1 Score: 675.2 bits (1741), Expect = 2.0e-190
Identity = 476/656 (72.56%), Postives = 479/656 (73.02%), Query Frame = 0


Query: 1   MTTPELFAQDEDVTHDKMQMQRSEKTKWPDVPDT-------------------------- 60
           MTTPELFAQDEDVTHDKMQMQRSEKTKWPD PD                           
Sbjct: 1   MTTPELFAQDEDVTHDKMQMQRSEKTKWPDGPDKKNDXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  -------------------------------------------------XXXXXXXXXXX 120
                                                               XXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXGIEKQKKKKAKLSEGIDGDNCERGPDEXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPKGSSN 180
           XXXXXXXXXXXXXXXXXXXXXXXX                            LSPKGSSN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXVEGGSQENVHEGGDGLTENEDIGDPSEGLSPKGSSN 180

Query: 181 YERGPDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTEN 240
           YERG D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               GLTEN
Sbjct: 181 YERGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDEGRSQEKVHGGGTGLTEN 240

Query: 241 EDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSRDNSLHIKNEKKLRML----- 300
           EDI                       XXXXXXXXXXX                       
Sbjct: 241 EDIGGPSERLSPKGSSNCKRGPDGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ---KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXX 360
              KVREGGAGLT NEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXX
Sbjct: 301 SQEKVREGGAGLTVNEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXX 360

Query: 361 XXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 420
           XXXXXXXXXXXXXXXXXRFSKEEDEIVK AVMQYIHEHGLGDEGLKKVLKCREFPELKNC
Sbjct: 361 XXXXXXXXXXXXXXXXXRFSKEEDEIVKMAVMQYIHEHGLGDEGLKKVLKCREFPELKNC 420

Query: 421 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 480
           WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK
Sbjct: 421 WKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGK 480

Query: 481 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWG 540
           HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVN DLRNKASEEKISKHGMLRDNICWG
Sbjct: 481 HRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNIDLRNKASEEKISKHGMLRDNICWG 540

Query: 541 AISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQL 574
           AISDKLATRSNALCCMKWYRQLTSPMVAEG+WEDVDDYRLVDALS+LDAVSIEDVEWDQL
Sbjct: 541 AISDKLATRSNALCCMKWYRQLTSPMVAEGEWEDVDDYRLVDALSSLDAVSIEDVEWDQL 600

[Close]

BLAST of Carg23885 vs. NCBI nr
Match: XP_022147285.1 (RNA polymerase I termination factor isoform X1 [Momordica charantia])

HSP 1 Score: 576.6 bits (1485), Expect = 9.5e-161
Identity = 277/353 (78.47%), Postives = 305/353 (86.40%), Query Frame = 0


Query: 221 KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXX 280
           KV EGGAGL EN D+  PS+R SPKGSSKKV FS+DVEIFP+ DG+S +KTKQ+      
Sbjct: 188 KVHEGGAGLRENGDIASPSKRLSPKGSSKKVSFSDDVEIFPLVDGQSSEKTKQD------ 247

Query: 281 XXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKD 340
                         RFSKEEDE+VK AV++YI EHGLGDEGLKKVL CREFPE+KNCWKD
Sbjct: 248 -------DGLIRGKRFSKEEDEMVKKAVLEYIEEHGLGDEGLKKVLHCREFPEVKNCWKD 307

Query: 341 IGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRF 400
           IGK+L +RPYLSVYYRAHILFERD+ RKWTPEEYE+VRKFH+K+GSDWK LADALGKHRF
Sbjct: 308 IGKALSWRPYLSVYYRAHILFERDDKRKWTPEEYELVRKFHDKHGSDWKVLADALGKHRF 367

Query: 401 HVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAIS 460
           HVKDTWRRIKL NMKKG WTQDEYQKLFDLVNTDLR KA EEK SKHGMLRDNICWGAIS
Sbjct: 368 HVKDTWRRIKLPNMKKGHWTQDEYQKLFDLVNTDLRLKAFEEKKSKHGMLRDNICWGAIS 427

Query: 461 DKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEH 520
           DKL+TRS ALCC KWYRQLTSPMVAE +W DVDDY L+DALS+LDA SIEDVEWDQLL+H
Sbjct: 428 DKLSTRSTALCCQKWYRQLTSPMVAEDEWADVDDYHLIDALSSLDACSIEDVEWDQLLDH 487

Query: 521 RDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIV 574
           R+GDICRKRWSQMVKHIG++ NKSFSEQVE+LSKRYSIDVL+AREA+D APIV
Sbjct: 488 RNGDICRKRWSQMVKHIGESANKSFSEQVEVLSKRYSIDVLDAREAYDSAPIV 527

[Close]

BLAST of Carg23885 vs. NCBI nr
Match: XP_022147286.1 (cyclin-D-binding Myb-like transcription factor 1 isoform X2 [Momordica charantia] >XP_022147288.1 cyclin-D-binding Myb-like transcription factor 1 isoform X2 [Momordica charantia])

HSP 1 Score: 576.6 bits (1485), Expect = 9.5e-161
Identity = 277/353 (78.47%), Postives = 305/353 (86.40%), Query Frame = 0


Query: 221 KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXX 280
           KV EGGAGL EN D+  PS+R SPKGSSKKV FS+DVEIFP+ DG+S +KTKQ+      
Sbjct: 166 KVHEGGAGLRENGDIASPSKRLSPKGSSKKVSFSDDVEIFPLVDGQSSEKTKQD------ 225

Query: 281 XXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKD 340
                         RFSKEEDE+VK AV++YI EHGLGDEGLKKVL CREFPE+KNCWKD
Sbjct: 226 -------DGLIRGKRFSKEEDEMVKKAVLEYIEEHGLGDEGLKKVLHCREFPEVKNCWKD 285

Query: 341 IGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRF 400
           IGK+L +RPYLSVYYRAHILFERD+ RKWTPEEYE+VRKFH+K+GSDWK LADALGKHRF
Sbjct: 286 IGKALSWRPYLSVYYRAHILFERDDKRKWTPEEYELVRKFHDKHGSDWKVLADALGKHRF 345

Query: 401 HVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAIS 460
           HVKDTWRRIKL NMKKG WTQDEYQKLFDLVNTDLR KA EEK SKHGMLRDNICWGAIS
Sbjct: 346 HVKDTWRRIKLPNMKKGHWTQDEYQKLFDLVNTDLRLKAFEEKKSKHGMLRDNICWGAIS 405

Query: 461 DKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEH 520
           DKL+TRS ALCC KWYRQLTSPMVAE +W DVDDY L+DALS+LDA SIEDVEWDQLL+H
Sbjct: 406 DKLSTRSTALCCQKWYRQLTSPMVAEDEWADVDDYHLIDALSSLDACSIEDVEWDQLLDH 465

Query: 521 RDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIV 574
           R+GDICRKRWSQMVKHIG++ NKSFSEQVE+LSKRYSIDVL+AREA+D APIV
Sbjct: 466 RNGDICRKRWSQMVKHIGESANKSFSEQVEVLSKRYSIDVLDAREAYDSAPIV 505

[Close]

BLAST of Carg23885 vs. TAIR10
Match: AT5G41020.1 (myb family transcription factor)

HSP 1 Score: 366.7 bits (940), Expect = 2.7e-101
Identity = 190/325 (58.46%), Postives = 237/325 (72.92%), Query Frame = 0


Query: 247 SSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXXXXXXXXXXXXXXXXRFSKEEDEIVKT 306
           SSK+V+FS+ VE FP             XXXXXXXXXXXXXX      RF+KEEDE+VK 
Sbjct: 271 SSKRVKFSDQVEFFP------------XXXXXXXXXXXXXXXKVVRGKRFTKEEDEMVKN 330

Query: 307 AVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDES 366
           AV++YI  H LGDEG+K V++C+ +P+LK CWK+I  +LP+R Y SVY+RAH +FE    
Sbjct: 331 AVLEYIDNHALGDEGIKMVMECKAYPQLKGCWKEITSALPWRTYNSVYHRAHTIFEAGSQ 390

Query: 367 RKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQK 426
             WT E+ E+V +F + +G+DWK LADA+GKHR HVKD WRR +L   KKG W ++EYQ 
Sbjct: 391 GIWTKEDIELVMEFQKTHGNDWKTLADAMGKHRKHVKDAWRRGRLAGKKKGHWMREEYQN 450

Query: 427 LFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAE 486
           LFDLVN DLR KA +EK SKHGML+DNI W AISD L TR +  CC KWY QL SPMVA+
Sbjct: 451 LFDLVNKDLRMKAFKEKHSKHGMLKDNIPWMAISDVLETRDHVTCCQKWYEQLISPMVAK 510

Query: 487 GDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFS 546
           G W +VDDYRL++ L  LDA  I+DV+WD LLE+RDG+ CRKRW+QM+ HIG   +K+F+
Sbjct: 511 GMWANVDDYRLLEELLKLDAACIDDVDWDNLLENRDGEACRKRWNQMIIHIGVPKSKTFA 570

Query: 547 EQVELLSKRYSIDVLEAREAFDDAP 572
           EQVE+LS RY  D+ E RE FD+ P
Sbjct: 571 EQVEILSDRYCPDIAEDREDFDNRP 583

[Close]

BLAST of Carg23885 vs. TAIR10
Match: AT4G32730.2 (Homeodomain-like protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-07
Identity = 45/179 (25.14%), Postives = 79/179 (44.13%), Query Frame = 0


Query: 363 RDESRKWTPEEYEIVRKFHEKY-GSDWKGLADALGKHRFHVK--DTWRRIKLTNMKKGRW 422
           R    +WTPEE E++ K  E++ G +WK +A+   K R  V+    W+++    + KG W
Sbjct: 32  RSTKGQWTPEEDEVLCKAVERFQGKNWKKIAECF-KDRTDVQCLHRWQKVLNPELVKGPW 91

Query: 423 TQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQL 482
           +++E   + DLV              K+G  +    W  IS  L  R    C  +W+  L
Sbjct: 92  SKEEDNTIIDLV-------------EKYGPKK----WSTISQHLPGRIGKQCRERWHNHL 151

Query: 483 TSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEH---RDGDICRKRWSQMVK 536
            +P + +  W   ++  L+       A  I   +W +L++    R  +  +  W+  VK
Sbjct: 152 -NPGINKNAWTQEEELTLI------RAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVK 185

[Close]

BLAST of Carg23885 vs. TAIR10
Match: AT5G02320.1 (myb domain protein 3r-5)

HSP 1 Score: 52.8 bits (125), Expect = 8.7e-07
Identity = 36/134 (26.87%), Postives = 61/134 (45.52%), Query Frame = 0


Query: 369 WTPEEYEIVRKFHEKY-GSDWKGLADALGKH-RFHVKDTWRRIKLTNMKKGRWTQDEYQK 428
           WTPEE E +R+  EKY G  WK +A+   +         W+++    + KG WTQ+E  K
Sbjct: 78  WTPEEDETLRRAVEKYKGKRWKKIAEFFPERTEVQCLHRWQKVLNPELVKGPWTQEEDDK 137

Query: 429 LFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAE 488
           + +LV              K+G  +    W  I+  L  R    C  +W+  L +P + +
Sbjct: 138 IVELV-------------KKYGPAK----WSVIAKSLPGRIGKQCRERWHNHL-NPGIRK 193

Query: 489 GDWEDVDDYRLVDA 501
             W   ++  L+++
Sbjct: 198 DAWTVEEESALMNS 193

[Close]

BLAST of Carg23885 vs. TAIR10
Match: AT3G09370.2 (myb domain protein 3r-3)

HSP 1 Score: 49.7 bits (117), Expect = 7.3e-06
Identity = 33/134 (24.63%), Postives = 61/134 (45.52%), Query Frame = 0


Query: 369 WTPEEYEIVRKFHEKY-GSDWKGLADAL-GKHRFHVKDTWRRIKLTNMKKGRWTQDEYQK 428
           WTPEE E +R+  + + G  WK +A +   +        W+++   ++ KG WT +E +K
Sbjct: 86  WTPEEDETLRQAVDTFKGKSWKNIAKSFPDRTEVQCLHRWQKVLNPDLIKGPWTHEEDEK 145

Query: 429 LFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAE 488
           + +LV              K+G  +    W  I+  L  R    C  +W+  L +P + +
Sbjct: 146 IVELV-------------EKYGPAK----WSIIAQSLPGRIGKQCRERWHNHL-NPDINK 201

Query: 489 GDWEDVDDYRLVDA 501
             W   ++  L++A
Sbjct: 206 DAWTTEEEVALMNA 201

[Close]

BLAST of Carg23885 vs. Swiss-Prot
Match: sp|P52550|MYBA_CHICK (Myb-related protein A OS=Gallus gallus OX=9031 GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.3e-07
Identity = 48/189 (25.40%), Postives = 84/189 (44.44%), Query Frame = 0


Query: 368 KWTPEEYEIVRKFHEKYGS-DWKGLADAL-GKHRFHVKDTWRRIKLTNMKKGRWTQDEYQ 427
           KWT +E E ++K  E+ G+ DW  +A  L  +  F  +  W+++    + KG WT++E Q
Sbjct: 37  KWTRDEDEKLKKLVEQNGTDDWAFIASHLQNRSDFQCQHRWQKVLNPELIKGPWTKEEDQ 96

Query: 428 KLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVA 487
           ++ +LV              K+G  R    W  I+  L  R    C  +W+  L +P V 
Sbjct: 97  RVIELV-------------QKYGPKR----WSLIAKHLKGRIGKQCRERWHNHL-NPEVK 156

Query: 488 EGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGD------ 547
           +  W + +D  + +A   L        E  +LL  R  +  +  W+  ++   +      
Sbjct: 157 KSSWTEAEDRVIYEAHKRL---GNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQ 204

Query: 548 NGNKSFSEQ 549
           +G KS SE+
Sbjct: 217 DGTKSSSER 204

[Close]

BLAST of Carg23885 vs. Swiss-Prot
Match: sp|Q0JHU7|MB3R2_ORYSJ (Transcription factor MYB3R-2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB3R-2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-06
Identity = 39/135 (28.89%), Postives = 64/135 (47.41%), Query Frame = 0


Query: 369 WTPEEYEIVRKFHEKY-GSDWKGLADALGKHRFHVK--DTWRRIKLTNMKKGRWTQDEYQ 428
           WTPEE E +RK  E Y G +WK +A+    +R  V+    W+++    + KG WTQ+E  
Sbjct: 70  WTPEEDETLRKAVEAYKGRNWKKIAECF-PYRTEVQCLHRWQKVLNPELIKGPWTQEEDD 129

Query: 429 KLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVA 488
           ++ DLV              K+G  +    W  I+  L  R    C  +W+  L +P + 
Sbjct: 130 QIIDLV-------------KKYGPTK----WSVIAKALPGRIGKQCRERWHNHL-NPEIR 185

Query: 489 EGDWEDVDDYRLVDA 501
           +  W   ++  L++A
Sbjct: 190 KDAWTTEEEQALINA 185

[Close]

BLAST of Carg23885 vs. Swiss-Prot
Match: sp|Q05935|MYBA_XENLA (Myb-related protein A OS=Xenopus laevis OX=8355 GN=mybl1 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-06
Identity = 40/169 (23.67%), Postives = 74/169 (43.79%), Query Frame = 0


Query: 368 KWTPEEYEIVRKFHEKYGSDWKGLA-DALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQK 427
           +WT +E + V+K  EK+G DW  +A   + +     +  W ++    + KG WT++E Q+
Sbjct: 37  RWTKDEDDKVKKLVEKHGEDWGVVARHFINRSEVQCQHRWHKVLSPELVKGPWTKEEDQR 96

Query: 428 LFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAE 487
           + +LV+             K+G  +    W  I+  L  R    C  +W+  L +P V +
Sbjct: 97  VIELVH-------------KYGPKK----WSIIAKHLKGRIGKQCRERWHNHL-NPDVKK 156

Query: 488 GDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVK 536
             W + +D  +  A   +        E  +LL  R  +  +  W+  +K
Sbjct: 157 SSWTEEEDRIIYSAHKRM---GNRWAEIAKLLPGRTDNSIKNHWNSTMK 184

[Close]

BLAST of Carg23885 vs. Swiss-Prot
Match: sp|Q03237|MYBB_CHICK (Myb-related protein B OS=Gallus gallus OX=9031 GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-06
Identity = 46/176 (26.14%), Postives = 75/176 (42.61%), Query Frame = 0


Query: 368 KWTPEEYEIVRKFHEKYG-SDWKGLADAL-GKHRFHVKDTWRRIKLTNMKKGRWTQDEYQ 427
           KWT EE E ++     YG +DWK LA     +     +  W R+   ++ KG WT++E Q
Sbjct: 33  KWTQEEDEQLKMLVRHYGQNDWKFLASHFPNRSDQQCQYRWLRVLNPDLVKGPWTKEEDQ 92

Query: 428 KLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVA 487
           K+ +LV              K+G  +    W  I+  L  R    C  +W+  L +P V 
Sbjct: 93  KVIELV-------------KKYGTKQ----WTLIAKHLKGRLGKQCRERWHNHL-NPEVK 152

Query: 488 EGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNG 542
           +  W + +D  + +A      +     E  +LL  R  +  +  W+  +K   D G
Sbjct: 153 KSSWTEEEDRIIFEAHK---VLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVDTG 187

[Close]

BLAST of Carg23885 vs. Swiss-Prot
Match: sp|O15816|MYBB_DICDI (Myb-like protein B OS=Dictyostelium discoideum OX=44689 GN=mybB PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-06
Identity = 45/184 (24.46%), Postives = 79/184 (42.93%), Query Frame = 0


Query: 363 RDESRKWTPEEYE-IVRKFHEKYGSDWKGLADAL--GKHRFHVKDTWRRIKLTNMKKGRW 422
           R    KWT EE + +++   E     WK +A  L  GK        W+R+    +KKG W
Sbjct: 436 RSPPNKWTKEESQNLIKLVTENGDKQWKKIATKLGGGKTGAQCAQHWKRVLSPEIKKGSW 495

Query: 423 TQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQL 482
            + E + LF LV+             KHG       W  ++ ++ TR++  C  ++++ +
Sbjct: 496 DEAEEELLFQLVD-------------KHGQ-----SWKNVAIEIKTRTDIQCRYQYFKAI 555

Query: 483 TSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEH----------RDGDICRKR 534
              M  + +W  ++D  L   +  L   + E + + Q+ +H          R    C+ R
Sbjct: 556 ---MSRQTEWNQLEDDILTKKI-KLMTQNNEKISFQQVSKHLARAKTTKIPRTALECKSR 597

[Close]

BLAST of Carg23885 vs. TrEMBL
Match: tr|A0A0A0L901|A0A0A0L901_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124810 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.5e-159
Identity = 273/353 (77.34%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 221 KVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXX 280
           KV+EGGAGL ENE++    ER SPKGSSKKVRFSEDVEIFP+ D ++  KTK++      
Sbjct: 298 KVQEGGAGLRENEEISSSPERQSPKGSSKKVRFSEDVEIFPLVDDQNSGKTKED------ 357

Query: 281 XXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKD 340
                         RFSKEEDEIVK AV +YI +H LGDEGLK VL CRE+PE+K+CWKD
Sbjct: 358 -------DGLIRGKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCREYPEIKSCWKD 417

Query: 341 IGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRF 400
           IGK++PYRPYLSVYYRAHILFERDE RKWT EEYE+VRKFH+ +GSDWKGLAD LGKHRF
Sbjct: 418 IGKAIPYRPYLSVYYRAHILFERDEKRKWTHEEYELVRKFHDTHGSDWKGLADVLGKHRF 477

Query: 401 HVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAIS 460
           HVKDTWRRIKL NMKKG+WTQDEYQKLFDLVN DLR KA EEK SKHGMLRDNICWGAIS
Sbjct: 478 HVKDTWRRIKLPNMKKGQWTQDEYQKLFDLVNKDLRLKAYEEKRSKHGMLRDNICWGAIS 537

Query: 461 DKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEH 520
           D L+TRS ALCC KWYRQLTSPMVAE +W DVDDYRLVDALS+LDA SIEDVEWDQLLEH
Sbjct: 538 DVLSTRSTALCCQKWYRQLTSPMVAENEWADVDDYRLVDALSSLDACSIEDVEWDQLLEH 597

Query: 521 RDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREAFDDAPIV 574
           RDGD+CRKRWSQMVKHIGDNGNKSFSEQVE+LS+RYSIDVL+AREA+D+AP+V
Sbjct: 598 RDGDVCRKRWSQMVKHIGDNGNKSFSEQVEILSQRYSIDVLDAREAYDNAPVV 637

[Close]

BLAST of Carg23885 vs. TrEMBL
Match: tr|A0A1S3AVK4|A0A1S3AVK4_CUCME (RNA polymerase I termination factor OS=Cucumis melo OX=3656 GN=LOC103483314 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.5e-151
Identity = 258/329 (78.42%), Postives = 285/329 (86.63%), Query Frame = 0


Query: 245 KGSSKKVRFSEDVEIFPIADGKSRKKTKQEXXXXXXXXXXXXXXXXXXXXRFSKEEDEIV 304
           +GSSKKVRFSEDVEIFP+ D +S  KTK++                    RFSKEEDEIV
Sbjct: 217 EGSSKKVRFSEDVEIFPLVDDRSSGKTKED-------------DGLIRGKRFSKEEDEIV 276

Query: 305 KTAVMQYIHEHGLGDEGLKKVLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERD 364
           K AV +YI +H LGDEGLK VL CRE+PE+K+CWKDIGK++PYRPYLSVYYRAHILFERD
Sbjct: 277 KKAVFEYIEKHALGDEGLKMVLHCREYPEVKSCWKDIGKAIPYRPYLSVYYRAHILFERD 336

Query: 365 ESRKWTPEEYEIVRKFHEKYGSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEY 424
           E+RKWTPEEYE VRKFH+++GSDWK LAD LGKHRFHVKDTWRRIKL NMKKG+WTQDEY
Sbjct: 337 ETRKWTPEEYEFVRKFHDEHGSDWKALADVLGKHRFHVKDTWRRIKLPNMKKGQWTQDEY 396

Query: 425 QKLFDLVNTDLRNKASEEKISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMV 484
           QKLFDLVN DLR KASEEK SKHGMLRDNICWGAISD L+TRS ALCC KWYRQLTSPMV
Sbjct: 397 QKLFDLVNKDLRLKASEEKRSKHGMLRDNICWGAISDVLSTRSTALCCQKWYRQLTSPMV 456

Query: 485 AEGDWEDVDDYRLVDALSNLDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKS 544
           AE +W DVDDYRLVDALS+LDA SIEDVEWDQLLEHRDGD+CRKRWSQM+KHIGDNGNKS
Sbjct: 457 AENEWADVDDYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQMIKHIGDNGNKS 516

Query: 545 FSEQVELLSKRYSIDVLEAREAFDDAPIV 574
           FSEQVE+LS RYSIDVL+AREA+D+AP+V
Sbjct: 517 FSEQVEILSMRYSIDVLDAREAYDNAPVV 532

[Close]

BLAST of Carg23885 vs. TrEMBL
Match: tr|A0A2C9V1G5|A0A2C9V1G5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G149200 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.5e-130
Identity = 232/370 (62.70%), Postives = 283/370 (76.49%), Query Frame = 0


Query: 206 DNSLHIK-NEKKLRMLKVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIAD 265
           +N L  K +E+K R+      G G   N     PSER +PKG+SK+V FSE+VE+FP++D
Sbjct: 385 ENGLERKGSERKQRV------GKGFKAN----NPSERSTPKGTSKRVSFSEEVEVFPLSD 444

Query: 266 GKSRKKTKQEXXXXXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKK 325
            +S +  +++                    RFS EEDE+VK AV+ YI+  GLG+EGLK 
Sbjct: 445 CQSGETVQKK--------------ELVQGKRFSHEEDEMVKEAVLNYINARGLGEEGLKM 504

Query: 326 VLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKY 385
           VL C++ PE+KNCWK+IG++LP+RPY+SVYYRAHILFERDE R WTPEEYEIV KFHEKY
Sbjct: 505 VLNCKKHPEIKNCWKEIGEALPWRPYISVYYRAHILFERDERRSWTPEEYEIVHKFHEKY 564

Query: 386 GSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEE-K 445
           G++WK LA+ALGKHR HVKD WRRIKL N K+GRW+Q+EYQ LFDLVN DLR KA EE +
Sbjct: 565 GAEWKTLAEALGKHRIHVKDAWRRIKLANRKRGRWSQEEYQTLFDLVNMDLRMKAFEEVR 624

Query: 446 ISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSN 505
            SKHGMLRDNICW AISDKL +R+  +CCMKWY QLTSPMVAEG W DVDDYRLV AL +
Sbjct: 625 SSKHGMLRDNICWTAISDKLGSRTTPMCCMKWYNQLTSPMVAEGQWLDVDDYRLVIALYD 684

Query: 506 LDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEA 565
           LDA  +EDV+WD LLEHR GD+CRKRW+QMVKH+GD+GNKSF++QVE+L +RY  DVLEA
Sbjct: 685 LDACCMEDVDWDNLLEHRSGDVCRKRWNQMVKHLGDHGNKSFADQVEVLMQRYCPDVLEA 730

Query: 566 REAFDDAPIV 574
           REA+   P+V
Sbjct: 745 REAYYSKPLV 730

[Close]

BLAST of Carg23885 vs. TrEMBL
Match: tr|A0A2C9V1K8|A0A2C9V1K8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G149200 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.5e-130
Identity = 232/370 (62.70%), Postives = 283/370 (76.49%), Query Frame = 0


Query: 206 DNSLHIK-NEKKLRMLKVREGGAGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIAD 265
           +N L  K +E+K R+      G G   N     PSER +PKG+SK+V FSE+VE+FP++D
Sbjct: 494 ENGLERKGSERKQRV------GKGFKAN----NPSERSTPKGTSKRVSFSEEVEVFPLSD 553

Query: 266 GKSRKKTKQEXXXXXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKK 325
            +S +  +++                    RFS EEDE+VK AV+ YI+  GLG+EGLK 
Sbjct: 554 CQSGETVQKK--------------ELVQGKRFSHEEDEMVKEAVLNYINARGLGEEGLKM 613

Query: 326 VLKCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKY 385
           VL C++ PE+KNCWK+IG++LP+RPY+SVYYRAHILFERDE R WTPEEYEIV KFHEKY
Sbjct: 614 VLNCKKHPEIKNCWKEIGEALPWRPYISVYYRAHILFERDERRSWTPEEYEIVHKFHEKY 673

Query: 386 GSDWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEE-K 445
           G++WK LA+ALGKHR HVKD WRRIKL N K+GRW+Q+EYQ LFDLVN DLR KA EE +
Sbjct: 674 GAEWKTLAEALGKHRIHVKDAWRRIKLANRKRGRWSQEEYQTLFDLVNMDLRMKAFEEVR 733

Query: 446 ISKHGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSN 505
            SKHGMLRDNICW AISDKL +R+  +CCMKWY QLTSPMVAEG W DVDDYRLV AL +
Sbjct: 734 SSKHGMLRDNICWTAISDKLGSRTTPMCCMKWYNQLTSPMVAEGQWLDVDDYRLVIALYD 793

Query: 506 LDAVSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEA 565
           LDA  +EDV+WD LLEHR GD+CRKRW+QMVKH+GD+GNKSF++QVE+L +RY  DVLEA
Sbjct: 794 LDACCMEDVDWDNLLEHRSGDVCRKRWNQMVKHLGDHGNKSFADQVEVLMQRYCPDVLEA 839

Query: 566 REAFDDAPIV 574
           REA+   P+V
Sbjct: 854 REAYYSKPLV 839

[Close]

BLAST of Carg23885 vs. TrEMBL
Match: tr|A0A2H5Q534|A0A2H5Q534_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_196870 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.8e-127
Identity = 226/367 (61.58%), Postives = 273/367 (74.39%), Query Frame = 0


Query: 211 IKNEKKLRMLKVREGG----AGLTENEDVVGPSERPSPKGSSKKVRFSEDVEIFPIADGK 270
           IK +KK   +K   GG    +   +  +    SE  + K  SKKV FS DV++FP +D K
Sbjct: 233 IKEKKKATSVKKHSGGDKKASQTKKGVETNDLSEGSAQKERSKKVSFSNDVQVFPSSDVK 292

Query: 271 SRKKTKQEXXXXXXXXXXXXXXXXXXXXRFSKEEDEIVKTAVMQYIHEHGLGDEGLKKVL 330
           + K                         RFSKEEDE++K AVM YI  HGLG+EGL  VL
Sbjct: 293 NGK-----------------DDGFVRGKRFSKEEDEMIKRAVMNYIETHGLGEEGLNMVL 352

Query: 331 KCREFPELKNCWKDIGKSLPYRPYLSVYYRAHILFERDESRKWTPEEYEIVRKFHEKYGS 390
            CR  PE+K+CWK+IG +LP+RPY S+YYRAHI+F+RDE+RKWTPEE E+VRKFHEK+GS
Sbjct: 353 HCRSHPEVKHCWKEIGSALPWRPYDSIYYRAHIIFQRDENRKWTPEELELVRKFHEKHGS 412

Query: 391 DWKGLADALGKHRFHVKDTWRRIKLTNMKKGRWTQDEYQKLFDLVNTDLRNKASEEKISK 450
           +WK LADALGKHRFHVKD WRR++L N KKG+W+Q+EYQKLFDLVN DLR +A EEK +K
Sbjct: 413 NWKMLADALGKHRFHVKDAWRRVRLPNQKKGQWSQEEYQKLFDLVNMDLRMRALEEKKTK 472

Query: 451 HGMLRDNICWGAISDKLATRSNALCCMKWYRQLTSPMVAEGDWEDVDDYRLVDALSNLDA 510
           HGMLRDNI W AISDKLATRSNA+CCMKWY QLTSPMVAEG W D DD+ LV+ALS+LDA
Sbjct: 473 HGMLRDNISWEAISDKLATRSNAICCMKWYDQLTSPMVAEGKWADTDDFHLVNALSSLDA 532

Query: 511 VSIEDVEWDQLLEHRDGDICRKRWSQMVKHIGDNGNKSFSEQVELLSKRYSIDVLEAREA 570
             ++DV+WD LLEHR G +C+KRW+QMVKH+G +GNKSF EQVE+LS RYS DVLEAREA
Sbjct: 533 CCMDDVDWDNLLEHRSGTLCQKRWNQMVKHLGTDGNKSFPEQVEILSTRYSPDVLEAREA 582

Query: 571 FDDAPIV 574
           ++  P V
Sbjct: 593 YNSKPAV 582

The following BLAST results are available for this feature:

BLAST of Carg23885 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939438.1	4.2e-193	76.68	RNA polymerase I termination factor [Cucurbita moschata]	[more]
XP_023539348.1	1.2e-190	98.58	RNA polymerase I termination factor [Cucurbita pepo subsp. pepo] >XP_023539349.1...	[more]
XP_022974105.1	2.0e-190	72.56	RNA polymerase I termination factor [Cucurbita maxima]	[more]
XP_022147285.1	9.5e-161	78.47	RNA polymerase I termination factor isoform X1 [Momordica charantia]	[more]
XP_022147286.1	9.5e-161	78.47	cyclin-D-binding Myb-like transcription factor 1 isoform X2 [Momordica charantia...	[more]

BLAST of Carg23885 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41020.1	2.7e-101	58.46	myb family transcription factor	[more]
AT4G32730.2	1.3e-07	25.14	Homeodomain-like protein	[more]
AT5G02320.1	8.7e-07	26.87	myb domain protein 3r-5	[more]
AT3G09370.2	7.3e-06	24.63	myb domain protein 3r-3	[more]

BLAST of Carg23885 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P52550\|MYBA_CHICK	8.3e-07	25.40	Myb-related protein A OS=Gallus gallus OX=9031 GN=MYBL1 PE=2 SV=1	[more]
sp\|Q0JHU7\|MB3R2_ORYSJ	1.1e-06	28.89	Transcription factor MYB3R-2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB3R-2...	[more]
sp\|Q05935\|MYBA_XENLA	1.1e-06	23.67	Myb-related protein A OS=Xenopus laevis OX=8355 GN=mybl1 PE=2 SV=1	[more]
sp\|Q03237\|MYBB_CHICK	1.4e-06	26.14	Myb-related protein B OS=Gallus gallus OX=9031 GN=MYBL2 PE=1 SV=1	[more]
sp\|O15816\|MYBB_DICDI	1.4e-06	24.46	Myb-like protein B OS=Dictyostelium discoideum OX=44689 GN=mybB PE=2 SV=2	[more]

BLAST of Carg23885 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L901\|A0A0A0L901_CUCSA	4.5e-159	77.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124810 PE=4 SV=1	[more]
tr\|A0A1S3AVK4\|A0A1S3AVK4_CUCME	4.5e-151	78.42	RNA polymerase I termination factor OS=Cucumis melo OX=3656 GN=LOC103483314 PE=4...	[more]
tr\|A0A2C9V1G5\|A0A2C9V1G5_MANES	7.5e-130	62.70	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G149200 PE=4 SV=...	[more]
tr\|A0A2C9V1K8\|A0A2C9V1K8_MANES	7.5e-130	62.70	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G149200 PE=3 SV=...	[more]
tr\|A0A2H5Q534\|A0A2H5Q534_CITUN	7.8e-127	61.58	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_196870 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23885-RA	Carg23885-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 414..480 e-value: 8.8E-8 score: 34.1
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 370..410 e-value: 3.2E-11 score: 44.6
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 369..427 e-value: 1.1E-11 score: 44.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..290
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 24..568
None	No IPR available	PANTHER	PTHR10641:SF956	GB\|AAC33480.1	coord: 24..568
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 292..363 e-value: 8.5E-4 score: 28.6 coord: 365..412 e-value: 0.27 score: 20.3 coord: 415..481 e-value: 0.076 score: 22.1
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 295..361 score: 3.973
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 481..534 score: 7.073
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 368..410 score: 6.562
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 411..479 score: 7.526
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 366..427

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23885	Cla021275	Watermelon (97103) v1	carwmB0483
Carg23885	Csa3G124810	Cucumber (Chinese Long) v2	carcuB0518
Carg23885	MELO3C006154	Melon (DHL92) v3.5.1	carmeB0494
Carg23885	ClCG05G001940	Watermelon (Charleston Gray)	carwcgB0472
Carg23885	CSPI03G09220	Wild cucumber (PI 183967)	carcpiB0525
Carg23885	Cucsa.257970	Cucumber (Gy14) v1	carcgyB0559
Carg23885	CmaCh06G011130	Cucurbita maxima (Rimu)	carcmaB0679
Carg23885	CmoCh06G011400	Cucurbita moschata (Rifu)	carcmoB0661
Carg23885	Lsi05G019970	Bottle gourd (USVL1VR-Ls)	carlsiB442
Carg23885	Cp4.1LG08g01830	Cucurbita pepo (Zucchini)	carcpeB0687
Carg23885	CsGy3G009300	Cucumber (Gy14) v2	carcgybB0495
Carg23885	MELO3C006154.2	Melon (DHL92) v3.6.1	carmedB0500
Carg23885	CsaV3_3G009340	Cucumber (Chinese Long) v3	carcucB0524
Carg23885	Cla97C05G082380	Watermelon (97103) v2	carwmbB0511
Carg23885	Bhi01G000223	Wax gourd	carwgoB0591

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23885	Silver-seed gourd	carcarB474
Carg23885	Silver-seed gourd	carcarB476
Carg23885	Cucumber (Gy14) v2	carcgybB0496
Carg23885	Cucumber (Gy14) v1	carcgyB0560
Carg23885	Cucurbita maxima (Rimu)	carcmaB0678
Carg23885	Cucurbita moschata (Rifu)	carcmoB0659
Carg23885	Cucurbita pepo (Zucchini)	carcpeB0684
Carg23885	Cucurbita pepo (Zucchini)	carcpeB0685
Carg23885	Wild cucumber (PI 183967)	carcpiB0526
Carg23885	Cucumber (Chinese Long) v2	carcuB0519
Carg23885	Cucumber (Chinese Long) v3	carcucB0525
Carg23885	Melon (DHL92) v3.5.1	carmeB0493
Carg23885	Melon (DHL92) v3.6.1	carmedB0499
Carg23885	Watermelon (Charleston Gray)	carwcgB0471
Carg23885	Watermelon (97103) v1	carwmB0484
Carg23885	Watermelon (97103) v2	carwmbB0510