Carg23734 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23734
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dirigent protein
Location	Cucurbita_argyrosperma_scaffold_213 : 266590 .. 267147 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTTCAAATCTCCTCACCTTCACGAACTCCCTCCTCCTCGCGATCCTCGCGATCCTTGCTCTGCTCTGCTCCAATAGCTTCCCGAACCTCTTCAAGCCCCAATCGAACCAGACGAACATCGTAATCTACGTCCACGACTACTTCACCGGAGAAGACGCATCGGCGATCGCAGTCGGCGGCAGAAAAGGATTGGAATCGAACGTTCTGGAGTTCGGAACCCTAATCGTGGTCGACGATCCGGTGACGGAAGGGCCGAGGATCGAGTCGAGAGAGATCGGAAGGGCGCAAGGTATGTACATAAACTCCCAATCGGACGGGAAAGGACTGTATATGGTGTTCTCGGTGATTTTCACCGGCGGCGAGTTCAGAGGGAGTAGTTTGGAGATTCAGGGCTCGGATTTGTTCACGTTGAAGGAAAGGGAATTTGGAGTGGTTTCCGGAACCGGTTTTTTCCGGTTCGTTAAGGGGTTTGGGATTATGCAAACCGAGAATATGGATTTGGTTCATTTGAGAGCTGTTATTAAGCTCAATATTACAGTAAAACACTATTGA

mRNA sequence

ATGGCGATTTCAAATCTCCTCACCTTCACGAACTCCCTCCTCCTCGCGATCCTCGCGATCCTTGCTCTGCTCTGCTCCAATAGCTTCCCGAACCTCTTCAAGCCCCAATCGAACCAGACGAACATCGTAATCTACGTCCACGACTACTTCACCGGAGAAGACGCATCGGCGATCGCAGTCGGCGGCAGAAAAGGATTGGAATCGAACGTTCTGGAGTTCGGAACCCTAATCGTGGTCGACGATCCGGTGACGGAAGGGCCGAGGATCGAGTCGAGAGAGATCGGAAGGGCGCAAGGTATGTACATAAACTCCCAATCGGACGGGAAAGGACTGTATATGGTGTTCTCGGTGATTTTCACCGGCGGCGAGTTCAGAGGGAGTAGTTTGGAGATTCAGGGCTCGGATTTGTTCACGTTGAAGGAAAGGGAATTTGGAGTGGTTTCCGGAACCGGTTTTTTCCGGTTCGTTAAGGGGTTTGGGATTATGCAAACCGAGAATATGGATTTGGTTCATTTGAGAGCTGTTATTAAGCTCAATATTACAGTAAAACACTATTGA

Coding sequence (CDS)

ATGGCGATTTCAAATCTCCTCACCTTCACGAACTCCCTCCTCCTCGCGATCCTCGCGATCCTTGCTCTGCTCTGCTCCAATAGCTTCCCGAACCTCTTCAAGCCCCAATCGAACCAGACGAACATCGTAATCTACGTCCACGACTACTTCACCGGAGAAGACGCATCGGCGATCGCAGTCGGCGGCAGAAAAGGATTGGAATCGAACGTTCTGGAGTTCGGAACCCTAATCGTGGTCGACGATCCGGTGACGGAAGGGCCGAGGATCGAGTCGAGAGAGATCGGAAGGGCGCAAGGTATGTACATAAACTCCCAATCGGACGGGAAAGGACTGTATATGGTGTTCTCGGTGATTTTCACCGGCGGCGAGTTCAGAGGGAGTAGTTTGGAGATTCAGGGCTCGGATTTGTTCACGTTGAAGGAAAGGGAATTTGGAGTGGTTTCCGGAACCGGTTTTTTCCGGTTCGTTAAGGGGTTTGGGATTATGCAAACCGAGAATATGGATTTGGTTCATTTGAGAGCTGTTATTAAGCTCAATATTACAGTAAAACACTATTGA

Protein sequence

MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKHY

Homology

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BLAST of Carg23734 vs. NCBI nr
Match: XP_023540783.1 (dirigent protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 2.4e-94
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MAISNLLTFTNSLLLAILAILA+LCSN FPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV
Sbjct: 35  MAISNLLTFTNSLLLAILAILAILCSNGFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 94

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ESNVLEFGTLIVVDDPVTEGPRI+SREIGRAQGMYINSQSDGKGLYMVFSVIFT
Sbjct: 95  GGRKGSESNVLEFGTLIVVDDPVTEGPRIDSREIGRAQGMYINSQSDGKGLYMVFSVIFT 154

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI
Sbjct: 155 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 214

Query: 181 TVKHY 186
           TVKHY
Sbjct: 215 TVKHY 219

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BLAST of Carg23734 vs. NCBI nr
Match: XP_022938344.1 (dirigent protein 11-like [Cucurbita moschata])

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-91
Identity = 179/185 (96.76%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MAISNLLTFTNSLLL ILAI   LCSN FPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV
Sbjct: 1   MAISNLLTFTNSLLLVILAI---LCSNGFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT
Sbjct: 61  GGRKGSESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI
Sbjct: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180

Query: 181 TVKHY 186
           TVKHY
Sbjct: 181 TVKHY 182

[Close]

BLAST of Carg23734 vs. NCBI nr
Match: XP_022972023.1 (dirigent protein 11-like [Cucurbita maxima])

HSP 1 Score: 340.1 bits (871), Expect = 4.7e-90
Identity = 175/185 (94.59%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MAISNLLTFTNSLLLA+LAI   LCSN FPNLFKPQSN+TNIVIYVHDYFTGEDASAI V
Sbjct: 20  MAISNLLTFTNSLLLAVLAI---LCSNGFPNLFKPQSNRTNIVIYVHDYFTGEDASAITV 79

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ES+VLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT
Sbjct: 80  GGRKGSESSVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 139

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIM+TENMDLVHLRAVIKLNI
Sbjct: 140 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMKTENMDLVHLRAVIKLNI 199

Query: 181 TVKHY 186
           TVKHY
Sbjct: 200 TVKHY 201

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BLAST of Carg23734 vs. NCBI nr
Match: XP_008438952.1 (PREDICTED: dirigent protein 11-like [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81
Identity = 159/185 (85.95%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MA+S LLTFTN LL   L+ILAL  SN FPNLF PQ NQTN+V+YVHDYFTGEDASAI V
Sbjct: 1   MAVSGLLTFTNFLL---LSILALYFSNGFPNLFNPQPNQTNLVVYVHDYFTGEDASAITV 60

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ES+VLEFGT+IVVDDPVTEGP+IESREIGRAQGMYINSQSDGKGLYMVFS+IF+
Sbjct: 61  GGRKGPESSVLEFGTVIVVDDPVTEGPKIESREIGRAQGMYINSQSDGKGLYMVFSLIFS 120

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEF GSSLEIQGSDLFT+KEREFGV SGTGFFRFVKGFGIMQTE+MDLV+LRAVIKLNI
Sbjct: 121 GGEFGGSSLEIQGSDLFTMKEREFGVASGTGFFRFVKGFGIMQTESMDLVNLRAVIKLNI 180

Query: 181 TVKHY 186
           TVKHY
Sbjct: 181 TVKHY 182

[Close]

BLAST of Carg23734 vs. NCBI nr
Match: XP_004134245.1 (PREDICTED: dirigent protein 11-like [Cucumis sativus] >KGN57168.1 hypothetical protein Csa_3G166330 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 9.7e-80
Identity = 156/185 (84.32%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MA+S+ LTFTN LL   L+I+AL  SN FPNLF PQ NQTN+V+YVHDYFTGEDASAI V
Sbjct: 1   MAVSDRLTFTNFLL---LSIIALYFSNGFPNLFNPQPNQTNLVVYVHDYFTGEDASAITV 60

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ES+VLEFGT +VVDD VTEGP+I+SREIGRAQGMYINSQSDGKGLYMVFSVIF+
Sbjct: 61  GGRKGPESSVLEFGTQMVVDDLVTEGPKIDSREIGRAQGMYINSQSDGKGLYMVFSVIFS 120

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEFRGSSLEIQG DLFT+KEREFGVVSGTGFFRFVKGFGIMQTE+MDLVHLRAVIKLNI
Sbjct: 121 GGEFRGSSLEIQGPDLFTMKEREFGVVSGTGFFRFVKGFGIMQTESMDLVHLRAVIKLNI 180

Query: 181 TVKHY 186
           TV HY
Sbjct: 181 TVNHY 182

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BLAST of Carg23734 vs. TAIR10
Match: AT1G22900.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 120.9 bits (302), Expect = 8.1e-28
Identity = 64/178 (35.96%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 7   LTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGGRKGL 66
           L F+  LLL I    +   S + P         T++  Y HD  +G+  + I V    G 
Sbjct: 18  LIFSTVLLLTITVTQSKPYSKTTPFQGNKPDKLTHLHFYFHDIISGDKPTTIRVAEAPGT 77

Query: 67  ESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFRG 126
            S+   FG +++VD PVTEGP + S+E+GRAQG+Y ++     G  MVF+ +FT GEF G
Sbjct: 78  NSSATVFGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNG 137

Query: 127 SSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKH 185
           S+  + G +   L+ERE  ++ GTG FRF +G+ + +T    +V++ AV++ N+ + H
Sbjct: 138 STAALYGRNPILLEERELPIIGGTGDFRFARGYALPKT--YKVVNIDAVVEYNVFIWH 193

[Close]

BLAST of Carg23734 vs. TAIR10
Match: AT5G42510.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-25
Identity = 61/179 (34.08%), Postives = 105/179 (58.66%), Query Frame = 0


Query: 6   LLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGGRKG 65
           LL   +S+LL  +++ A   +  +   +KP+   T++  Y HD  +G+  +A+ V   + 
Sbjct: 8   LLPLLSSILLLAVSVTAYSTTTPYQG-YKPE-KFTHLHFYFHDVISGDKPTAVKVAEARP 67

Query: 66  LESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFR 125
             +  ++FG +++ DDP+TEGP   S+E+GRAQGMY ++        MVF+ +FT GEF 
Sbjct: 68  TTTLNVKFGVIMIADDPLTEGPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFN 127

Query: 126 GSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKH 185
           GS++ + G +    K RE  ++ GTG FRF +G+ + +T    +V L AV++ N+ + H
Sbjct: 128 GSTIAVYGRNDIFSKVRELPIIGGTGAFRFARGYALPKT--YKIVGLDAVVEYNVFIWH 182

[Close]

BLAST of Carg23734 vs. TAIR10
Match: AT5G42500.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-25
Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 40  TNIVIYVHDYFTGEDASAIAVGGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQG 99
           T++  Y HD  +G+  +A+ V   +   S+ + FG +++ DDP+TEGP   S+E+GRAQG
Sbjct: 43  THLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQG 102

Query: 100 MYINSQSDGKGLYMVFSVIFTGGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGF 159
           MY  +        MVF++ FT GEF GS++ + G +    K RE  ++ GTG FRF +G+
Sbjct: 103 MYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGY 162

Query: 160 GIMQTENMDLVHLRAVIKLNITVKH 185
              Q +   +V L AV++ N+ + H
Sbjct: 163 A--QAKTYKVVGLDAVVEYNVFIWH 185

[Close]

BLAST of Carg23734 vs. TAIR10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-23
Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 13  LLLAILAILALLCSNSFPNLFK------PQSNQTNIVIYVHDYFTGEDASAIAVGGRKGL 72
           L LA++    +  S SF    K           T++  Y HD  +G+  +++ V      
Sbjct: 12  LFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTT 71

Query: 73  ESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFRG 132
            S+   FG + VVDD +T GP I S E+GRAQGMY ++  +  GL M F+++FT G+F  
Sbjct: 72  NSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSD 131

Query: 133 SSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKH 185
           S++ + G +    K RE  ++ GTG FRF +G+ + +T   ++    AV++ N+ + H
Sbjct: 132 STVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

[Close]

BLAST of Carg23734 vs. TAIR10
Match: AT2G21110.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 100.9 bits (250), Expect = 8.6e-22
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 40  TNIVIYVHDYFTGEDASAIAVG----GRKGLESNVLEFGTLIVVDDPVTEGPRIESREIG 99
           TN+  + HD  T  + SAI +      R   +S+   FG+L  +DDP+T GP  +S +IG
Sbjct: 37  TNLHFFFHDTLTAPNPSAILIAKPTHTRGDNDSSPSPFGSLFALDDPLTVGPDPKSEKIG 96

Query: 100 RAQGMYINSQSDGKGLYMVFSVIFTGGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRF 159
            A+GMY++S      L M     FT G+F GSS+ +   +  T KERE  VV G G FR 
Sbjct: 97  NARGMYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREVAVVGGRGRFRM 156

Query: 160 VKGFGIMQTENMDLVHLRAVIKLNITVKHY 186
            +G   + T  ++L +  A+++ N+T+ HY
Sbjct: 157 ARGVAQLNTYYVNLTNGDAIVEYNVTLYHY 186

[Close]

BLAST of Carg23734 vs. Swiss-Prot
Match: sp|Q67YM6|DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 64/178 (35.96%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 7   LTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGGRKGL 66
           L F+  LLL I    +   S + P         T++  Y HD  +G+  + I V    G 
Sbjct: 18  LIFSTVLLLTITVTQSKPYSKTTPFQGNKPDKLTHLHFYFHDIISGDKPTTIRVAEAPGT 77

Query: 67  ESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFRG 126
            S+   FG +++VD PVTEGP + S+E+GRAQG+Y ++     G  MVF+ +FT GEF G
Sbjct: 78  NSSATVFGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNG 137

Query: 127 SSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKH 185
           S+  + G +   L+ERE  ++ GTG FRF +G+ + +T    +V++ AV++ N+ + H
Sbjct: 138 STAALYGRNPILLEERELPIIGGTGDFRFARGYALPKT--YKVVNIDAVVEYNVFIWH 193

[Close]

BLAST of Carg23734 vs. Swiss-Prot
Match: sp|Q9FIG6|DIR1_ARATH (Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.2e-24
Identity = 61/179 (34.08%), Postives = 105/179 (58.66%), Query Frame = 0


Query: 6   LLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGGRKG 65
           LL   +S+LL  +++ A   +  +   +KP+   T++  Y HD  +G+  +A+ V   + 
Sbjct: 8   LLPLLSSILLLAVSVTAYSTTTPYQG-YKPE-KFTHLHFYFHDVISGDKPTAVKVAEARP 67

Query: 66  LESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFR 125
             +  ++FG +++ DDP+TEGP   S+E+GRAQGMY ++        MVF+ +FT GEF 
Sbjct: 68  TTTLNVKFGVIMIADDPLTEGPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFN 127

Query: 126 GSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKH 185
           GS++ + G +    K RE  ++ GTG FRF +G+ + +T    +V L AV++ N+ + H
Sbjct: 128 GSTIAVYGRNDIFSKVRELPIIGGTGAFRFARGYALPKT--YKIVGLDAVVEYNVFIWH 182

[Close]

BLAST of Carg23734 vs. Swiss-Prot
Match: sp|Q9FIG7|DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.8e-24
Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 40  TNIVIYVHDYFTGEDASAIAVGGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQG 99
           T++  Y HD  +G+  +A+ V   +   S+ + FG +++ DDP+TEGP   S+E+GRAQG
Sbjct: 43  THLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQG 102

Query: 100 MYINSQSDGKGLYMVFSVIFTGGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGF 159
           MY  +        MVF++ FT GEF GS++ + G +    K RE  ++ GTG FRF +G+
Sbjct: 103 MYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGY 162

Query: 160 GIMQTENMDLVHLRAVIKLNITVKH 185
              Q +   +V L AV++ N+ + H
Sbjct: 163 A--QAKTYKVVGLDAVVEYNVFIWH 185

[Close]

BLAST of Carg23734 vs. Swiss-Prot
Match: sp|Q9SS03|DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.8e-22
Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 13  LLLAILAILALLCSNSFPNLFK------PQSNQTNIVIYVHDYFTGEDASAIAVGGRKGL 72
           L LA++    +  S SF    K           T++  Y HD  +G+  +++ V      
Sbjct: 12  LFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTT 71

Query: 73  ESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGGEFRG 132
            S+   FG + VVDD +T GP I S E+GRAQGMY ++  +  GL M F+++FT G+F  
Sbjct: 72  NSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSD 131

Query: 133 SSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITVKH 185
           S++ + G +    K RE  ++ GTG FRF +G+ + +T   ++    AV++ N+ + H
Sbjct: 132 STVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

[Close]

BLAST of Carg23734 vs. Swiss-Prot
Match: sp|Q9SKQ2|DIR4_ARATH (Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-20
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 40  TNIVIYVHDYFTGEDASAIAVG----GRKGLESNVLEFGTLIVVDDPVTEGPRIESREIG 99
           TN+  + HD  T  + SAI +      R   +S+   FG+L  +DDP+T GP  +S +IG
Sbjct: 37  TNLHFFFHDTLTAPNPSAILIAKPTHTRGDNDSSPSPFGSLFALDDPLTVGPDPKSEKIG 96

Query: 100 RAQGMYINSQSDGKGLYMVFSVIFTGGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRF 159
            A+GMY++S      L M     FT G+F GSS+ +   +  T KERE  VV G G FR 
Sbjct: 97  NARGMYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREVAVVGGRGRFRM 156

Query: 160 VKGFGIMQTENMDLVHLRAVIKLNITVKHY 186
            +G   + T  ++L +  A+++ N+T+ HY
Sbjct: 157 ARGVAQLNTYYVNLTNGDAIVEYNVTLYHY 186

[Close]

BLAST of Carg23734 vs. TrEMBL
Match: tr|A0A1S3AXK3|A0A1S3AXK3_CUCME (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103483893 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.2e-81
Identity = 159/185 (85.95%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MA+S LLTFTN LL   L+ILAL  SN FPNLF PQ NQTN+V+YVHDYFTGEDASAI V
Sbjct: 1   MAVSGLLTFTNFLL---LSILALYFSNGFPNLFNPQPNQTNLVVYVHDYFTGEDASAITV 60

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ES+VLEFGT+IVVDDPVTEGP+IESREIGRAQGMYINSQSDGKGLYMVFS+IF+
Sbjct: 61  GGRKGPESSVLEFGTVIVVDDPVTEGPKIESREIGRAQGMYINSQSDGKGLYMVFSLIFS 120

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEF GSSLEIQGSDLFT+KEREFGV SGTGFFRFVKGFGIMQTE+MDLV+LRAVIKLNI
Sbjct: 121 GGEFGGSSLEIQGSDLFTMKEREFGVASGTGFFRFVKGFGIMQTESMDLVNLRAVIKLNI 180

Query: 181 TVKHY 186
           TVKHY
Sbjct: 181 TVKHY 182

[Close]

BLAST of Carg23734 vs. TrEMBL
Match: tr|A0A0A0L5X2|A0A0A0L5X2_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_3G166330 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 6.4e-80
Identity = 156/185 (84.32%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MAISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAV 60
           MA+S+ LTFTN LL   L+I+AL  SN FPNLF PQ NQTN+V+YVHDYFTGEDASAI V
Sbjct: 1   MAVSDRLTFTNFLL---LSIIALYFSNGFPNLFNPQPNQTNLVVYVHDYFTGEDASAITV 60

Query: 61  GGRKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFT 120
           GGRKG ES+VLEFGT +VVDD VTEGP+I+SREIGRAQGMYINSQSDGKGLYMVFSVIF+
Sbjct: 61  GGRKGPESSVLEFGTQMVVDDLVTEGPKIDSREIGRAQGMYINSQSDGKGLYMVFSVIFS 120

Query: 121 GGEFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNI 180
           GGEFRGSSLEIQG DLFT+KEREFGVVSGTGFFRFVKGFGIMQTE+MDLVHLRAVIKLNI
Sbjct: 121 GGEFRGSSLEIQGPDLFTMKEREFGVVSGTGFFRFVKGFGIMQTESMDLVHLRAVIKLNI 180

Query: 181 TVKHY 186
           TV HY
Sbjct: 181 TVNHY 182

[Close]

BLAST of Carg23734 vs. TrEMBL
Match: tr|A0A0L9TSA5|A0A0L9TSA5_PHAAN (Dirigent protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g298600 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 9.7e-60
Identity = 118/183 (64.48%), Postives = 150/183 (81.97%), Query Frame = 0


Query: 3   ISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGG 62
           ++N L  T++L   I  +  L  + +F + F+P+  QTN++ YVHD+FTG+ ++AI V G
Sbjct: 1   MNNPLNLTSNLFFFIFNLTILYAAYTF-STFQPK--QTNLIFYVHDHFTGDHSTAITVAG 60

Query: 63  RKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGG 122
           + G  SN+L FGT+ +VDDPVTEGP I+SR IGRAQGMYINSQ DGKGLYMVFSVIF+GG
Sbjct: 61  KTGAVSNILNFGTVAIVDDPVTEGPNIDSRLIGRAQGMYINSQLDGKGLYMVFSVIFSGG 120

Query: 123 EFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITV 182
           EF+GSSLEIQGSD+FT+KEREFGVVSGTG+FRFVKG+GIM+TE MD+  LRA +KLN+T+
Sbjct: 121 EFKGSSLEIQGSDIFTMKEREFGVVSGTGYFRFVKGYGIMETEFMDIATLRATLKLNVTL 180

Query: 183 KHY 186
           KHY
Sbjct: 181 KHY 180

[Close]

BLAST of Carg23734 vs. TrEMBL
Match: tr|A0A0S3R992|A0A0S3R992_PHAAN (Dirigent protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G513600 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 9.7e-60
Identity = 118/183 (64.48%), Postives = 150/183 (81.97%), Query Frame = 0


Query: 3   ISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGG 62
           ++N L  T++L   I  +  L  + +F + F+P+  QTN++ YVHD+FTG+ ++AI V G
Sbjct: 1   MNNPLNLTSNLFFFIFNLTILYAAYTF-STFQPK--QTNLIFYVHDHFTGDHSTAITVAG 60

Query: 63  RKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGG 122
           + G  SN+L FGT+ +VDDPVTEGP I+SR IGRAQGMYINSQ DGKGLYMVFSVIF+GG
Sbjct: 61  KTGAVSNILNFGTVAIVDDPVTEGPNIDSRLIGRAQGMYINSQLDGKGLYMVFSVIFSGG 120

Query: 123 EFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITV 182
           EF+GSSLEIQGSD+FT+KEREFGVVSGTG+FRFVKG+GIM+TE MD+  LRA +KLN+T+
Sbjct: 121 EFKGSSLEIQGSDIFTMKEREFGVVSGTGYFRFVKGYGIMETEFMDIATLRATLKLNVTL 180

Query: 183 KHY 186
           KHY
Sbjct: 181 KHY 180

[Close]

BLAST of Carg23734 vs. TrEMBL
Match: tr|A0A2I4EAI4|A0A2I4EAI4_9ROSI (Dirigent protein OS=Juglans regia OX=51240 GN=LOC108987835 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59
Identity = 116/183 (63.39%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 3   ISNLLTFTNSLLLAILAILALLCSNSFPNLFKPQSNQTNIVIYVHDYFTGEDASAIAVGG 62
           +SN L+ T +    I  +  L  S +FP L   Q  QTN+V YVHDYFTG D SAI V G
Sbjct: 1   MSNPLSLTPNFFFIIFTLTILYVSYTFPRL---QPKQTNLVFYVHDYFTGHDTSAITVAG 60

Query: 63  RKGLESNVLEFGTLIVVDDPVTEGPRIESREIGRAQGMYINSQSDGKGLYMVFSVIFTGG 122
           + G  SN+L+FGTL+ VDD VT+GP IES++IGRAQG+YINSQ DGKGL++VFSVIFT G
Sbjct: 61  KSGPTSNILQFGTLVAVDDLVTDGPSIESKQIGRAQGLYINSQLDGKGLHLVFSVIFTDG 120

Query: 123 EFRGSSLEIQGSDLFTLKEREFGVVSGTGFFRFVKGFGIMQTENMDLVHLRAVIKLNITV 182
           EF GS+LEIQG+D+F++KEREFG+VSGTG+FRFVKG+GIM+TE MD+ +LRA++KLN+T+
Sbjct: 121 EFIGSTLEIQGADIFSMKEREFGIVSGTGYFRFVKGYGIMETEFMDIANLRAILKLNVTL 180

Query: 183 KHY 186
           KHY
Sbjct: 181 KHY 180

The following BLAST results are available for this feature:

BLAST of Carg23734 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540783.1	2.4e-94	97.84	dirigent protein 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938344.1	1.1e-91	96.76	dirigent protein 11-like [Cucurbita moschata]	[more]
XP_022972023.1	4.7e-90	94.59	dirigent protein 11-like [Cucurbita maxima]	[more]
XP_008438952.1	1.8e-81	85.95	PREDICTED: dirigent protein 11-like [Cucumis melo]	[more]
XP_004134245.1	9.7e-80	84.32	PREDICTED: dirigent protein 11-like [Cucumis sativus] >KGN57168.1 hypothetical p...	[more]

BLAST of Carg23734 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22900.1	8.1e-28	35.96	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G42510.1	2.9e-25	34.08	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G42500.1	3.7e-25	37.24	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G65870.1	2.7e-23	32.58	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT2G21110.1	8.6e-22	36.67	Disease resistance-responsive (dirigent-like protein) family protein	[more]

BLAST of Carg23734 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q67YM6\|DIR11_ARATH	1.5e-26	35.96	Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1	[more]
sp\|Q9FIG6\|DIR1_ARATH	5.2e-24	34.08	Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1	[more]
sp\|Q9FIG7\|DIR2_ARATH	6.8e-24	37.24	Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1	[more]
sp\|Q9SS03\|DIR21_ARATH	4.8e-22	32.58	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]
sp\|Q9SKQ2\|DIR4_ARATH	1.6e-20	36.67	Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1	[more]

BLAST of Carg23734 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXK3\|A0A1S3AXK3_CUCME	1.2e-81	85.95	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103483893 PE=3 SV=1	[more]
tr\|A0A0A0L5X2\|A0A0A0L5X2_CUCSA	6.4e-80	84.32	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_3G166330 PE=3 SV=1	[more]
tr\|A0A0L9TSA5\|A0A0L9TSA5_PHAAN	9.7e-60	64.48	Dirigent protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g298600 PE=3 SV=1	[more]
tr\|A0A0S3R992\|A0A0S3R992_PHAAN	9.7e-60	64.48	Dirigent protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G513600 ...	[more]
tr\|A0A2I4EAI4\|A0A2I4EAI4_9ROSI	1.3e-59	63.39	Dirigent protein OS=Juglans regia OX=51240 GN=LOC108987835 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004265	Dirigent

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23734-RA	Carg23734-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 40..182 e-value: 2.7E-38 score: 131.1
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 2..185
None	No IPR available	PANTHER	PTHR21495:SF78	SUBFAMILY NOT NAMED	coord: 2..185

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23734	Cla021796	Watermelon (97103) v1	carwmB0953
Carg23734	Csa3G166330	Cucumber (Chinese Long) v2	carcuB0967
Carg23734	MELO3C006716	Melon (DHL92) v3.5.1	carmeB0934
Carg23734	CSPI03G14990	Wild cucumber (PI 183967)	carcpiB0989
Carg23734	Cucsa.252530	Cucumber (Gy14) v1	carcgyB1072
Carg23734	CmaCh06G015630	Cucurbita maxima (Rimu)	carcmaB1307
Carg23734	Lsi05G015960	Bottle gourd (USVL1VR-Ls)	carlsiB869
Carg23734	Cp4.1LG08g05350	Cucurbita pepo (Zucchini)	carcpeB1321
Carg23734	CsGy3G015110	Cucumber (Gy14) v2	carcgybB0939
Carg23734	MELO3C006716.2	Melon (DHL92) v3.6.1	carmedB0940
Carg23734	CsaV3_3G015180	Cucumber (Chinese Long) v3	carcucB0995
Carg23734	Cla97C05G088170	Watermelon (97103) v2	carwmbB1003
Carg23734	Bhi01G000782	Wax gourd	carwgoB1105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23734	Silver-seed gourd	carcarB318
Carg23734	Cucurbita maxima (Rimu)	carcmaB1304
Carg23734	Cucurbita maxima (Rimu)	carcmaB1305
Carg23734	Cucurbita moschata (Rifu)	carcmoB1273
Carg23734	Cucurbita moschata (Rifu)	carcmoB1276
Carg23734	Cucurbita pepo (Zucchini)	carcpeB1320
Carg23734	Watermelon (Charleston Gray)	carwcgB0929