Carg23097 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23097
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MADS box transcription factor AGAMOUS
Location	Cucurbita_argyrosperma_scaffold_215 : 143012 .. 147602 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACACACCTCCCTCTTTGGCTACCTTACTTCTATTTCCCTCTTCTCTTCCCCTAACCTTTTAGAACACAAGCTGTGTGCATTGATCTTCCTTAAACACAGCAAACAGCCCTTCTTTTTGTTCTGTCTTGGGAGTTCCGTCTTCAACCAGCTCAGGTTAGTGATCGAAATAAAACAAAGCTTTGATTCAGCTTCTGATTGTGTTGCTTATTCACATGTAAATCCACAAAAAAAGGAGATTAGAAGTGATAGAGCAAGTTTTTTAGCCTCAAAATCTGCATCTCACAATATATCTTCTCTATTCTTCTACCTCTTTTGGGATCATCAGAAGAGGGGAAGCTGAAAAATGAAGATTTGGGGTTTGATTGATGACTGATCTGCTTGGATTTGGTTTAGGTAAGAAGCTAATAAAGGGTTCCAGAATCAACAAGAGAGGAGAGGATGTCTGATTCACCTCAGAGGAAGATGGGAAGAGGAAAGATTGAGATTAAGAGGATCGAAAATACAACAAACCGTCAAGTCACTTTCTGTAAGAGACGAAATGGACTTCTCAAAAAGGCTTATGAGCTTTCTGTTCTGTGTGATGCTGAAGTTGCTCTCATCGTTTTCTCAACCCGTGGCCGCCTCTATGAGTATGCTAACAACAGGTAAACAACAACACTCCTAACCTCGTACATTATTTTCTTCAAATGTTCCTTTCTCCGCTTGATTTGTGTTTTTTCTCCTCAAACTTGTTGCTGATATGGATCCTGGAAGGTTTTAACTCAGCTTTTAGGAAGACCAAGATTTTGGGAATCTGGGTTGCGTTAAGAATATAGTCTTTTTTTGAAAGATTTGAGTTTTATGATATCAAAACTTACCAAATTTCTTTGATTTTTCTGAGTTTTTTTTGCTATAATTGATGAGTTCGATGGTTTTTGGCGTGGTGGATACATAGATCTGGTATAACAGATGAAAGATAGGGCATATTATGGAAGGTTCAAATGAGTAAGGGTTTTGGTAAGCTTATGGTTATATCTGAGCTCAGCTCTTTACCTTCCACCATTAGTCCAATCCCACTTCATCTCCTTCACATTTCCTCACAACAAACGTCAGTTGAACATAAAGAAACAGAAAGTAAGACCATATTAGGGTTTCAAACTTGTGGGTTTCCTTGAAACATGCTAAAACACCCTTTTCCAACCAATCACCTCCAACTCAAGATTGAACTACCTAATAGGTTTCCATTCAAACTCTGAAATAAAAATCTCATTAGATCTTCAAATATGAACTAATCAATCAATCTTTGTCCGGATTATTAGGGGTAACCCTCTGATTAAACTTGTATTAAACAAACCGAGCTAATTGCAAGTCAGAAACTTTACACAAGTTTAATCCTTGTCCCCATTGTTTGGGAAATGGGGTGTCTGGTTTCAGATTTTTGGTCTAGGGCTTCAAGAATCAGCCAAAACAGAGAATGGTAATCCGATTCAAAAAGAAACTAAACTGGGGCTTCTTGATTTTAACAAAAAAAATTGAATCTTTGTAAAAAAAAAAAAACGTATTTTTAGAGAGAGAGAGATTAGGGTATTGAATCACGTAGAACCAAGGTGAGGCCTTTAGCATTAATCTTAATAGGACAGCTGCTGTAGCCACCGATGGAAATGGACGGCTGTGATGTACACAGTGTTTGAGACAAAGGGCTTTTACCGCCACTTATGTTTTCCAAGAGTTCTTTTTTTTTAGTTCTTGTGTTGTATCGAGGTGGATAAGAGGGTGGAGTTAAGTTGATTAACCACTATACAAATGCGTGTATGACACTTGGCAAATTCTCATCCCTTTGATTGGATTAAGGCAATCATAATTCGAGATCTCTGTTGGATGTTTCAGACATAGCCAATCACCAGCTCGACGAAATTAAGGTATCAGTGCATCGGTAAAGGAAATCATGGATAAGTTTTGGATAAAAAAGAGTACTTAAATGTGGGAACTTTTTTCTTACCCTTCAAATTCCGTCACATCCATTGAGAAGCAGCTGACCCTTTGATGTGATTTCTATCATTCATTTTGCTTTTTATGGGATTTCGTAAAGGACTGAGTCAACTTGAGAGAGTTGGGTTAATGTGACAGTAAAAAACTTAAAACACGTAGCTTCTTGAGAATAAAAAACATGTTTTAATGCTTTGTTTTTTTGCAAGTGGAAGAACATGATAATTGTAATGATTAAGGAGGTTAATCAGCATGATATGATGTTAATTGCAGCGTGAAGACAACAATTGATAGATACAAAAAGGCATCTTCAAATTCTCCAAACACAGGATCTACTTCTGAAACTAACACTCAGGTACACTTCAATTTCAATTTCGTTACATGTGGAGAAATGGGTCTATAAGAAAACTTAATGCATCAAACAATTGAGTTCAAATATAAATGGTCGTGAAAAGGGATTCGCTCACTAAAACTGACTTGTTCTAAAGATTTTCGATAAGTTTAAGGTTTTGTTCTTCAATATGGAATATTAATTAGTCTATTGAGCTTTTACTGACATCGACACGAACCAATAATAGGTGTACTAGCTACATATTTGATAATGAATTCTGATTTGCTGGTGTTCCTTTATCTTATTAAATAACACCAAATTTTCATACCTAACCCTAACATTTTGTGCTCAATATTTGATATAAGTGGATCATGTTGTGAACCCTCAAAATGGGTGTAACCTTTTATGTTGGGTATCAATCCAAGCTTAAGGATATAAAACTTACTATTGAATGACATGCTAGTTTTACCAACAAGAAGCTGCCAAACTGCGTGTTCAGATTGGTAATTTGCAGAACTCAAACAGGTATGTTAACACGAAATTTATGCAAGCATGTGTTCATCACTTGTTCATCTTCTGAAGGGGATGTTGTTTCCAGGAACATGCTTGGTGATTCTCTAAGTTCTTTGAGTGTAAAAGATCTGAAAAGTCTTGAGAGCAAACTTGAGAAAGGAATTAGCAGAATTAGATCCAAAAAGGTTGGTTTTCTTCCTTATTTCTTAAGTTTCTTCTCTTAAAATAAAAACACTTTCTTTTGCTCTCTCTCTTCCAGAATGAACTCCTCTTTGCTGAAATCGAGTACATGCGGAAAAGGGTAAGCTTAATATCTTTTAGTTTTTCTTTTTTTTTTTTAAATGTAATCTAGTGCCGTAGACTTTCTACATATACTAGTGGTGAACTTTGGCGAACTTTGACGGTTACAAATGGTATTAGAGCCAGATATTGGTAGGTGTGCTAGCGAGGGCGCTGGGCTCCCAAAAAATGTATTGCGAGGGGAACGAAACATTTGAAACCTCTTCCTAGTAGACGATTTTTAAAACTATGAGACTGATAGCTATACGTAATTGGCCAAAATAGACAATATCTATTCCAACTAAACAACTTTCGAAATGGGTTGTTTAAAAGTTGAATTTCCCGATCAGGGTTTCAATGATTTTCCTCCAAATCGTAGAAAAGGCCAATCTTTTGAAGTTTTTGTTGCAAGAACTGTATAATGAATGATGTGAGTATATATTTGTAGAATGAAGTGATTATATATCCTTGAATTGAATGAAAAAAGTTGATCATTACAGGAGTTTGATTTGCACAACAACAATCAGCTGCTTCGAGCAAAGGTCCCCTTTTTTCTTTTTCAATCTCTCTGTCTGTCTCTTAATGAGCAGTTGACATTGAAATTGTAGAAATTGATGCAGATAGCTGAGAGTGAAAGAAATGTCAACATGATGGAAGGAGGAGAATTTGAGCTGATGCAATCTCATCCCTACGATCCAAGAGACTTCTTCCAAGTCAACGGCTTACAACACAATCAACAGTATCCACGTCAAGACAACATGTCTCTCCAGTTAGTATAAGGTTCTGTTTTTACAGTTAAATAAGAAGCCATTCTGCCTCTCTGTCTCTCCCATTATCTAACAGAATCCCAACCAAACATTTCGATGCAGTTAATAATAATATGATTTGAAGCACTCTGATTGTCGGATTACCATAAAAGAGTGCCCCATCTGCTGGTTGAAAGGTACTCCAAGGAAGTTGGAGATTAACCAAGTCTTAGCTTCTGGACTCAAAAAAGACTTATTCTAATATATTAGTATATCTATAATGTTGTTGTATGCTATGAATCCAAACATTAATAACCTTTCTTTGTCTTAAATCTATGTCTGTGATACAAACGACTAACATCTTTTCTCGTACTTACTGCTGTTTTGTTACTGTTTCACTGTCTCAACTTTCTCTGCTTCTAATTATGATACATTGAAGTTAGCTTTGAATGCGAAGAACAAGATGCTGGAAGTGTTGTTCAGCTAATATATATAATACATTTCATTCTCATTGATTGAAGGAAAGGACTTATAAGCAATTAAAGGAAAGGGCAGACTCTTCCAACTTAGATTGCATAAATTATATAAGTTTGGATTTAAGCTAGAGTTGAACGAGGCGACGAATGTCGATCGGGTAAGCGTCGGAGGGTCTTTGAGCGCTGTAAGCTCTTCTTCCAATAACGGTGTTTCCAGCCTCAGTTGGATGAAAGGCATCCCAAAATAGATACTCTCTTCTGTTAGGACATGGGGTTTGG

mRNA sequence

ACACACACCTCCCTCTTTGGCTACCTTACTTCTATTTCCCTCTTCTCTTCCCCTAACCTTTTAGAACACAAGCTGTGTGCATTGATCTTCCTTAAACACAGCAAACAGCCCTTCTTTTTGTTCTGTCTTGGGAGTTCCGTCTTCAACCAGCTCAGGTAAGAAGCTAATAAAGGGTTCCAGAATCAACAAGAGAGGAGAGGATGTCTGATTCACCTCAGAGGAAGATGGGAAGAGGAAAGATTGAGATTAAGAGGATCGAAAATACAACAAACCGTCAAGTCACTTTCTGTAAGAGACGAAATGGACTTCTCAAAAAGGCTTATGAGCTTTCTGTTCTGTGTGATGCTGAAGTTGCTCTCATCGTTTTCTCAACCCGTGGCCGCCTCTATGAGTATGCTAACAACAGCGTGAAGACAACAATTGATAGATACAAAAAGGCATCTTCAAATTCTCCAAACACAGGATCTACTTCTGAAACTAACACTCAGTTTTACCAACAAGAAGCTGCCAAACTGCGTGTTCAGATTGGTAATTTGCAGAACTCAAACAGGAACATGCTTGGTGATTCTCTAAGTTCTTTGAGTGTAAAAGATCTGAAAAGTCTTGAGAGCAAACTTGAGAAAGGAATTAGCAGAATTAGATCCAAAAAGAATGAACTCCTCTTTGCTGAAATCGAGTACATGCGGAAAAGGGAGTTTGATTTGCACAACAACAATCAGCTGCTTCGAGCAAAGATAGCTGAGAGTGAAAGAAATGTCAACATGATGGAAGGAGGAGAATTTGAGCTGATGCAATCTCATCCCTACGATCCAAGAGACTTCTTCCAAGTCAACGGCTTACAACACAATCAACAGTATCCACGTCAAGACAACATGTCTCTCCAGTTAGTATAAGTTAATAATAATATGATTTGAAGCACTCTGATTGTCGGATTACCATAAAAGAGTGCCCCATCTGCTGGTTGAAAGGTACTCCAAGGAAGTTGGAGATTAACCAAGTCTTAGCTTCTGGACTCAAAAAAGACTTATTCTAATATATTAGTATATCTATAATGTTGTTGTATGCTATGAATCCAAACATTAATAACCTTTCTTTGTCTTAAATCTATGTCTGTGATACAAACGACTAACATCTTTTCTCGTACTTACTGCTGTTTTGTTACTGTTTCACTGTCTCAACTTTCTCTGCTTCTAATTATGATACATTGAAGTTAGCTTTGAATGCGAAGAACAAGATGCTGGAAGTGTTGTTCAGCTAATATATATAATACATTTCATTCTCATTGATTGAAGGAAAGGACTTATAAGCAATTAAAGGAAAGGGCAGACTCTTCCAACTTAGATTGCATAAATTATATAAGTTTGGATTTAAGCTAGAGTTGAACGAGGCGACGAATGTCGATCGGGTAAGCGTCGGAGGGTCTTTGAGCGCTGTAAGCTCTTCTTCCAATAACGGTGTTTCCAGCCTCAGTTGGATGAAAGGCATCCCAAAATAGATACTCTCTTCTGTTAGGACATGGGGTTTGG

Coding sequence (CDS)

ATGTCTGATTCACCTCAGAGGAAGATGGGAAGAGGAAAGATTGAGATTAAGAGGATCGAAAATACAACAAACCGTCAAGTCACTTTCTGTAAGAGACGAAATGGACTTCTCAAAAAGGCTTATGAGCTTTCTGTTCTGTGTGATGCTGAAGTTGCTCTCATCGTTTTCTCAACCCGTGGCCGCCTCTATGAGTATGCTAACAACAGCGTGAAGACAACAATTGATAGATACAAAAAGGCATCTTCAAATTCTCCAAACACAGGATCTACTTCTGAAACTAACACTCAGTTTTACCAACAAGAAGCTGCCAAACTGCGTGTTCAGATTGGTAATTTGCAGAACTCAAACAGGAACATGCTTGGTGATTCTCTAAGTTCTTTGAGTGTAAAAGATCTGAAAAGTCTTGAGAGCAAACTTGAGAAAGGAATTAGCAGAATTAGATCCAAAAAGAATGAACTCCTCTTTGCTGAAATCGAGTACATGCGGAAAAGGGAGTTTGATTTGCACAACAACAATCAGCTGCTTCGAGCAAAGATAGCTGAGAGTGAAAGAAATGTCAACATGATGGAAGGAGGAGAATTTGAGCTGATGCAATCTCATCCCTACGATCCAAGAGACTTCTTCCAAGTCAACGGCTTACAACACAATCAACAGTATCCACGTCAAGACAACATGTCTCTCCAGTTAGTATAA

Protein sequence

MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV

Homology

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BLAST of Carg23097 vs. NCBI nr
Match: XP_023518205.1 (floral homeotic protein AGAMOUS-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 1.0e-118
Identity = 228/230 (99.13%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQ+KMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG
Sbjct: 1   MSDSPQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA
Sbjct: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV
Sbjct: 181 ESERNVNMMGGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 230

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BLAST of Carg23097 vs. NCBI nr
Match: XP_023003146.1 (floral homeotic protein AGAMOUS-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 433.7 bits (1114), Expect = 3.9e-118
Identity = 227/230 (98.70%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG
Sbjct: 19  MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 78

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 79  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 138

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKI 
Sbjct: 139 GESLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIV 198

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV
Sbjct: 199 ESERNVNMMGGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 248

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BLAST of Carg23097 vs. NCBI nr
Match: XP_022926903.1 (floral homeotic protein AGAMOUS-like [Cucurbita moschata])

HSP 1 Score: 433.3 bits (1113), Expect = 5.0e-118
Identity = 227/230 (98.70%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDS Q+KMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG
Sbjct: 1   MSDSAQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA
Sbjct: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSL LV
Sbjct: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLHLV 230

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BLAST of Carg23097 vs. NCBI nr
Match: XP_023518206.1 (floral homeotic protein AGAMOUS-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 3.3e-117
Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQ+KMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG
Sbjct: 1   MSDSPQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA
Sbjct: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSL 228
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSL
Sbjct: 181 ESERNVNMMGGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSL 227

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BLAST of Carg23097 vs. NCBI nr
Match: XP_022925702.1 (floral homeotic protein AGAMOUS [Cucurbita moschata] >XP_023544246.1 floral homeotic protein AGAMOUS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 2.4e-112
Identity = 219/230 (95.22%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RG
Sbjct: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 60

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVK TIDRYKKASS+S NTGSTSE NTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 61  RLYEYANNSVKATIDRYKKASSDSSNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNML 120

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKRE DLHNNNQLLRAKIA
Sbjct: 121 GESLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREIDLHNNNQLLRAKIA 180

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERN NMM GGEFELMQSHPYDPRDFFQVNGLQHN QYPRQDNM+LQLV
Sbjct: 181 ESERNANMM-GGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALQLV 229

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BLAST of Carg23097 vs. TAIR10
Match: AT4G18960.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 291.2 bits (744), Expect = 5.6e-79
Identity = 161/241 (66.80%), Postives = 198/241 (82.16%), Query Frame = 0


Query: 4   SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 63
           SP RK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12  SPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71

Query: 64  EYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDS 123
           EY+NNSVK TI+RYKKA S++ NTGS +E N Q+YQQE+AKLR QI ++QNSNR ++G++
Sbjct: 72  EYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGET 131

Query: 124 LSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESE 183
           + S+S K+L++LE +LE+ I+RIRSKKNELLF+EI+YM+KRE DLHN+NQ+LRAKIAE+E
Sbjct: 132 IGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENE 191

Query: 184 RN---VNMMEGGE--FELM-----QSHPYDPRDFFQVNGLQHNQQY----PRQDNMSLQL 231
           RN   +++M GG    +LM     QS P+D R++FQV  LQ N  +     RQD  +LQL
Sbjct: 192 RNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQL 251

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BLAST of Carg23097 vs. TAIR10
Match: AT3G58780.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 257.3 bits (656), Expect = 9.0e-69
Identity = 152/261 (58.24%), Postives = 183/261 (70.11%), Query Frame = 0


Query: 7   RKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 66
           +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYA
Sbjct: 14  KKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA 73

Query: 67  NNS-------------------------VKTTIDRYKKASSNSPNTGSTSETNTQFYQQE 126
           NNS                         V+ TI+RYKKA S++ N  S +E NTQ+YQQE
Sbjct: 74  NNSXXXXXXXXXXXXXXXXXLWIYSSHVVRGTIERYKKACSDAVNPPSVTEANTQYYQQE 133

Query: 127 AAKLRVQIGNLQNSNRNMLGDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYM 186
           A+KLR QI ++QNSNR+++G+SL SL+ K+LK+LE +LEKGISR+RSKKNELL AEIEYM
Sbjct: 134 ASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYM 193

Query: 187 RKREFDLHNNNQLLRAKIAESER------------NVNMMEGGEFELMQSHPYDPRDFFQ 231
           +KRE +L +NN  LRAKIAE  R               + E G     QS  Y+ R++  
Sbjct: 194 QKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQHYN-RNYIP 253

[Close]

BLAST of Carg23097 vs. TAIR10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 255.0 bits (650), Expect = 4.4e-68
Identity = 148/236 (62.71%), Postives = 182/236 (77.12%), Query Frame = 0


Query: 7   RKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 66
           +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYA
Sbjct: 14  KKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA 73

Query: 67  NNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDSLSS 126
           NNSV+ TI+RYKKA S++ N  + +E NTQ+YQQEA+KLR QI ++QN NR++LG+SL S
Sbjct: 74  NNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGS 133

Query: 127 LSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKR--EFDLHNNNQLLRAKIAE--- 186
           L+ K+LK+LES+LEKGISR+RSKK+E+L AEIEYM+KR  E +L N+N  LR+KI E   
Sbjct: 134 LNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKEIELQNDNMYLRSKITERTG 193

Query: 187 ---SERNV----NMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
               E +V     + E G     QS  Y+ R++  VN L+ NQ    QD   LQLV
Sbjct: 194 LQQQESSVIHQGTVYESGVTSSHQSGQYN-RNYIAVNLLEPNQNSSNQDQPPLQLV 248

[Close]

BLAST of Carg23097 vs. TAIR10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.1e-66
Identity = 134/196 (68.37%), Postives = 161/196 (82.14%), Query Frame = 0


Query: 8   KMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN 67
           +MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN
Sbjct: 26  RMGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN 85

Query: 68  NSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDSLSSL 127
           N++++TI+RYKKA S+S NT +  E N  +YQQE+AKLR QI  +QNSNRN++GDSLSSL
Sbjct: 86  NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 145

Query: 128 SVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESER--- 187
           SVK+LK +E++LEK ISRIRSKK+ELL  EIE  +KRE +L N N  LR K+AE ER   
Sbjct: 146 SVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQ 205

Query: 188 -NVNMMEGGEFELMQS 200
            +  M+ G E   +++
Sbjct: 206 HHHQMVSGSEINAIEA 221

[Close]

BLAST of Carg23097 vs. TAIR10
Match: AT2G45650.1 (AGAMOUS-like 6)

HSP 1 Score: 158.3 bits (399), Expect = 5.7e-39
Identity = 85/170 (50.00%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 9   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 68
           MGRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 69  SVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDSLSSLS 128
            +++TI+RY +  + S +     ET TQ + QE  KL+ +  +L  +NRN+LG+ L  + 
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEET-TQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 129 VKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAK 179
           VK+L++LE +LE  ++  R +K +++  E+E +RK+E  L + N+ L+ K
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIK 169

[Close]

BLAST of Carg23097 vs. Swiss-Prot
Match: sp|Q40872|AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.4e-87
Identity = 172/231 (74.46%), Postives = 199/231 (86.15%), Query Frame = 0


Query: 4   SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 63
           SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY
Sbjct: 12  SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 71

Query: 64  EYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDS 123
           EYANNSVK TI+RYKKA ++SPNT S SE N QFYQQEA+KLR +I ++Q +NRNM+G+S
Sbjct: 72  EYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGES 131

Query: 124 LSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESE 183
           L SL+V+DLK LE+KLEKGISRIRSKKNELLFAEIEYM+K+E DLHNNNQ LRAKIAE+E
Sbjct: 132 LGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENE 191

Query: 184 R---NVNMMEG-GEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           R   ++N+M G  ++EL     +D R++ Q+NGLQ N  Y RQD  +LQLV
Sbjct: 192 RAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTALQLV 242

[Close]

BLAST of Carg23097 vs. Swiss-Prot
Match: sp|Q40885|AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.1e-87
Identity = 171/231 (74.03%), Postives = 200/231 (86.58%), Query Frame = 0


Query: 4   SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 63
           SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12  SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71

Query: 64  EYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDS 123
           EYANNSVK TI+RYKKA S+S NTGS +E N Q+YQQEA+KLR QIGNLQN NRN LG+S
Sbjct: 72  EYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGES 131

Query: 124 LSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESE 183
           L++L+++DL++LE K+EKGIS+IR+KKNELLFAEIEYM+KRE DLHNNNQ LRAKIAE+E
Sbjct: 132 LAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETE 191

Query: 184 RN--VNMMEG-GEFELM-QSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           R+  +N+M G   ++L+     +D R++ QVNGLQ N  YPRQD   LQLV
Sbjct: 192 RSQQMNLMPGSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQDQPPLQLV 242

[Close]

BLAST of Carg23097 vs. Swiss-Prot
Match: sp|Q43585|AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.5e-86
Identity = 174/237 (73.42%), Postives = 195/237 (82.28%), Query Frame = 0


Query: 4   SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 63
           SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12  SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71

Query: 64  EYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDS 123
           EYANNSVK TI+RYKKA S+S NTGS SE N Q+YQQEA+KLR QIGNLQN NRNMLG+S
Sbjct: 72  EYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGES 131

Query: 124 LSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESE 183
           L++LS++DLK+LE K+EKGIS+IRSKKNELLFAEIEYM+KRE DLHNNNQ LRAKIAE+E
Sbjct: 132 LAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETE 191

Query: 184 ---------RNVNMMEGGEFELM-QSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
                              +EL+   H +D R++ QVNGLQ N  Y RQD  SLQLV
Sbjct: 192 XXXXXXXXXXXXXXXXXXXYELVPPPHQFDTRNYLQVNGLQTNNHYTRQDQPSLQLV 248

[Close]

BLAST of Carg23097 vs. Swiss-Prot
Match: sp|Q40168|AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum OX=4081 GN=AG1 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-85
Identity = 168/237 (70.89%), Postives = 194/237 (81.86%), Query Frame = 0


Query: 4   SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 63
           SPQRK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFS RGRLY
Sbjct: 12  SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLY 71

Query: 64  EYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDS 123
           EYANNSVK TI+RYKKA S+S NTGS SE N Q+YQQEA+KLR QIGNL N NRNM+G++
Sbjct: 72  EYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEA 131

Query: 124 LSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESE 183
           L+ + +K+LK+LE ++EKGIS+IRSKKNELLFAEIEYM+KRE DLHNNNQ LRAKIAE+E
Sbjct: 132 LAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETE 191

Query: 184 R------NVNMMEGGEFELMQSHP----YDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           R       +N+M G      +  P    +D R++ QVNGLQ N  YPRQD   +QLV
Sbjct: 192 RAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQDQPPIQLV 248

[Close]

BLAST of Carg23097 vs. Swiss-Prot
Match: sp|P17839|AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana OX=3702 GN=AG PE=1 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 1.0e-77
Identity = 161/241 (66.80%), Postives = 198/241 (82.16%), Query Frame = 0


Query: 4   SPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 63
           SP RK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12  SPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71

Query: 64  EYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGDS 123
           EY+NNSVK TI+RYKKA S++ NTGS +E N Q+YQQE+AKLR QI ++QNSNR ++G++
Sbjct: 72  EYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGET 131

Query: 124 LSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIAESE 183
           + S+S K+L++LE +LE+ I+RIRSKKNELLF+EI+YM+KRE DLHN+NQ+LRAKIAE+E
Sbjct: 132 IGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENE 191

Query: 184 RN---VNMMEGGE--FELM-----QSHPYDPRDFFQVNGLQHNQQY----PRQDNMSLQL 231
           RN   +++M GG    +LM     QS P+D R++FQV  LQ N  +     RQD  +LQL
Sbjct: 192 RNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQL 251

[Close]

BLAST of Carg23097 vs. TrEMBL
Match: tr|O64958|O64958_CUCSA (CUM1 OS=Cucumis sativus OX=3659 GN=CUM1 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.9e-111
Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RG
Sbjct: 34  MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 93

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVK TIDRYKKASS+S NTGSTSE NTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 94  RLYEYANNSVKATIDRYKKASSDSSNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNML 153

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSL+ KDLK LE+KLEKGISRIRSKKNELLFAEIEYMRKRE DLHNNNQ+LRAKIA
Sbjct: 154 GESLSSLTAKDLKGLETKLEKGISRIRSKKNELLFAEIEYMRKREIDLHNNNQMLRAKIA 213

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHN QYPRQDNM+LQLV
Sbjct: 214 ESERNVNMM-GGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALQLV 262

[Close]

BLAST of Carg23097 vs. TrEMBL
Match: tr|A0A0A0KID6|A0A0A0KID6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520410 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.9e-111
Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RG
Sbjct: 654 MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 713

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVK TIDRYKKASS+S NTGSTSE NTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 714 RLYEYANNSVKATIDRYKKASSDSSNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNML 773

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSL+ KDLK LE+KLEKGISRIRSKKNELLFAEIEYMRKRE DLHNNNQ+LRAKIA
Sbjct: 774 GESLSSLTAKDLKGLETKLEKGISRIRSKKNELLFAEIEYMRKREIDLHNNNQMLRAKIA 833

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHN QYPRQDNM+LQLV
Sbjct: 834 ESERNVNMM-GGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALQLV 882

[Close]

BLAST of Carg23097 vs. TrEMBL
Match: tr|Q9SBK1|Q9SBK1_CUCSA (Agamous-like putative transcription factor OS=Cucumis sativus OX=3659 GN=CAG3 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.9e-111
Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RG
Sbjct: 9   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 68

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVK TIDRYKKASS+S NTGSTSE NTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 69  RLYEYANNSVKATIDRYKKASSDSSNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNML 128

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSL+ KDLK LE+KLEKGISRIRSKKNELLFAEIEYMRKRE DLHNNNQ+LRAKIA
Sbjct: 129 GESLSSLTAKDLKGLETKLEKGISRIRSKKNELLFAEIEYMRKREIDLHNNNQMLRAKIA 188

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHN QYPRQDNM+LQLV
Sbjct: 189 ESERNVNMM-GGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALQLV 237

[Close]

BLAST of Carg23097 vs. TrEMBL
Match: tr|A0A1S3AZC2|A0A1S3AZC2_CUCME (floral homeotic protein AGAMOUS isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484417 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 8.8e-111
Identity = 214/230 (93.04%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RG
Sbjct: 34  MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 93

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVK TIDRYKKASS+S NTGSTSE NTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 94  RLYEYANNSVKATIDRYKKASSDSSNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNML 153

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSL+ KDLK LE+KLEKGISRIRSKKNELLFAEIEYMR+RE DLHNNNQ+LRAKIA
Sbjct: 154 GESLSSLTAKDLKGLETKLEKGISRIRSKKNELLFAEIEYMRRREIDLHNNNQMLRAKIA 213

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHN QYPRQDNM+LQLV
Sbjct: 214 ESERNVNMM-GGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALQLV 262

[Close]

BLAST of Carg23097 vs. TrEMBL
Match: tr|A0A1S3B000|A0A1S3B000_CUCME (floral homeotic protein AGAMOUS isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484417 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 8.8e-111
Identity = 214/230 (93.04%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 1   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 60
           MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RG
Sbjct: 9   MSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRG 68

Query: 61  RLYEYANNSVKTTIDRYKKASSNSPNTGSTSETNTQFYQQEAAKLRVQIGNLQNSNRNML 120
           RLYEYANNSVK TIDRYKKASS+S NTGSTSE NTQFYQQEAAKLRVQIGNLQNSNRNML
Sbjct: 69  RLYEYANNSVKATIDRYKKASSDSSNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNML 128

Query: 121 GDSLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIA 180
           G+SLSSL+ KDLK LE+KLEKGISRIRSKKNELLFAEIEYMR+RE DLHNNNQ+LRAKIA
Sbjct: 129 GESLSSLTAKDLKGLETKLEKGISRIRSKKNELLFAEIEYMRRREIDLHNNNQMLRAKIA 188

Query: 181 ESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQYPRQDNMSLQLV 231
           ESERNVNMM GGEFELMQSHPYDPRDFFQVNGLQHN QYPRQDNM+LQLV
Sbjct: 189 ESERNVNMM-GGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALQLV 237

The following BLAST results are available for this feature:

BLAST of Carg23097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518205.1	1.0e-118	99.13	floral homeotic protein AGAMOUS-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023003146.1	3.9e-118	98.70	floral homeotic protein AGAMOUS-like isoform X1 [Cucurbita maxima]	[more]
XP_022926903.1	5.0e-118	98.70	floral homeotic protein AGAMOUS-like [Cucurbita moschata]	[more]
XP_023518206.1	3.3e-117	99.12	floral homeotic protein AGAMOUS-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022925702.1	2.4e-112	95.22	floral homeotic protein AGAMOUS [Cucurbita moschata] >XP_023544246.1 floral home...	[more]

BLAST of Carg23097 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18960.1	5.6e-79	66.80	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.3	9.0e-69	58.24	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.2	4.4e-68	62.71	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.3	1.1e-66	68.37	K-box region and MADS-box transcription factor family protein	[more]
AT2G45650.1	5.7e-39	50.00	AGAMOUS-like 6	[more]

BLAST of Carg23097 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q40872\|AG_PANGI	2.4e-87	74.46	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]
sp\|Q40885\|AG_PETHY	9.1e-87	74.03	Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1	[more]
sp\|Q43585\|AG_TOBAC	4.5e-86	73.42	Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1	[more]
sp\|Q40168\|AG_SOLLC	2.9e-85	70.89	Floral homeotic protein AGAMOUS OS=Solanum lycopersicum OX=4081 GN=AG1 PE=2 SV=1	[more]
sp\|P17839\|AG_ARATH	1.0e-77	66.80	Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana OX=3702 GN=AG PE=1 SV=2	[more]

BLAST of Carg23097 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|O64958\|O64958_CUCSA	3.9e-111	93.48	CUM1 OS=Cucumis sativus OX=3659 GN=CUM1 PE=2 SV=1	[more]
tr\|A0A0A0KID6\|A0A0A0KID6_CUCSA	3.9e-111	93.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520410 PE=4 SV=1	[more]
tr\|Q9SBK1\|Q9SBK1_CUCSA	3.9e-111	93.48	Agamous-like putative transcription factor OS=Cucumis sativus OX=3659 GN=CAG3 PE...	[more]
tr\|A0A1S3AZC2\|A0A1S3AZC2_CUCME	8.8e-111	93.04	floral homeotic protein AGAMOUS isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034844...	[more]
tr\|A0A1S3B000\|A0A1S3B000_CUCME	8.8e-111	93.04	floral homeotic protein AGAMOUS isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034844...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR033896	MADS_MEF2-like
IPR036879	TF_MADSbox_sf
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23097-RA	Carg23097-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 7..225
None	No IPR available	PANTHER	PTHR11945:SF187	FLORAL HOMEOTIC PROTEIN AGAMOUS	coord: 7..225
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 11..31 score: 72.99 coord: 46..67 score: 64.02 coord: 31..46 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 9..68 e-value: 9.4E-42 score: 154.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 18..65 e-value: 1.9E-26 score: 91.2
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 11..65
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 9..69 score: 33.964
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 91..179 e-value: 1.8E-28 score: 98.4
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 95..185 score: 14.851
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 21..104 e-value: 1.8E-29 score: 103.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 10..87
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 10..84 e-value: 5.48206E-45 score: 146.158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23097	Cla019630	Watermelon (97103) v1	carwmB0956
Carg23097	Cla009725	Watermelon (97103) v1	carwmB0957
Carg23097	Csa6G520410	Cucumber (Chinese Long) v2	carcuB0972
Carg23097	Csa1G467100	Cucumber (Chinese Long) v2	carcuB0971
Carg23097	MELO3C007181	Melon (DHL92) v3.5.1	carmeB0937
Carg23097	MELO3C002691	Melon (DHL92) v3.5.1	carmeB0936
Carg23097	ClCG03G007310	Watermelon (Charleston Gray)	carwcgB0932
Carg23097	ClCG01G024100	Watermelon (Charleston Gray)	carwcgB0931
Carg23097	CSPI01G21720	Wild cucumber (PI 183967)	carcpiB0992
Carg23097	CSPI06G35750	Wild cucumber (PI 183967)	carcpiB0993
Carg23097	Cucsa.047280	Cucumber (Gy14) v1	carcgyB1075
Carg23097	Cucsa.212720	Cucumber (Gy14) v1	carcgyB1076
Carg23097	CmaCh07G001520	Cucurbita maxima (Rimu)	carcmaB1312
Carg23097	CmaCh03G013550	Cucurbita maxima (Rimu)	carcmaB1311
Carg23097	CmaCh13G005750	Cucurbita maxima (Rimu)	carcmaB1310
Carg23097	CmoCh03G013520	Cucurbita moschata (Rifu)	carcmoB1280
Carg23097	CmoCh13G006040	Cucurbita moschata (Rifu)	carcmoB1279
Carg23097	Lsi01G002050	Bottle gourd (USVL1VR-Ls)	carlsiB871
Carg23097	Lsi02G008450	Bottle gourd (USVL1VR-Ls)	carlsiB872
Carg23097	Cp4.1LG19g06490	Cucurbita pepo (Zucchini)	carcpeB1326
Carg23097	Cp4.1LG20g04840	Cucurbita pepo (Zucchini)	carcpeB1327
Carg23097	Cp4.1LG10g05620	Cucurbita pepo (Zucchini)	carcpeB1325
Carg23097	CsGy1G021380	Cucumber (Gy14) v2	carcgybB0943
Carg23097	CsGy6G035210	Cucumber (Gy14) v2	carcgybB0944
Carg23097	MELO3C007181.2	Melon (DHL92) v3.6.1	carmedB0943
Carg23097	MELO3C002691.2	Melon (DHL92) v3.6.1	carmedB0942
Carg23097	CsaV3_6G051220	Cucumber (Chinese Long) v3	carcucB0999
Carg23097	CsaV3_1G032920	Cucumber (Chinese Long) v3	carcucB0998
Carg23097	Cla97C01G024020	Watermelon (97103) v2	carwmbB1005
Carg23097	Cla97C03G058570	Watermelon (97103) v2	carwmbB1006
Carg23097	Bhi03G000010	Wax gourd	carwgoB1108

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23097	Carg15373	Silver-seed gourd	carcarB510
Carg23097	Carg19905	Silver-seed gourd	carcarB623

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23097	Cucurbita moschata (Rifu)	carcmoB1281
Carg23097	Cucurbita pepo (Zucchini)	carcpeB1324
Carg23097	Wax gourd	carwgoB1109