Carg22646 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22646
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF668 family protein
Location	Cucurbita_argyrosperma_scaffold_148 : 153506 .. 154974 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAAGGCTATAATGGAGAGATTGAAGCTTCAAAATTTGTCGACATATGTTTTGTGGTAATTGGGTTCATCAGGGGTTTAGATTGTCAATGTTTGCTGAAGTTCAGTTTGGGAAAGGCCAAGTTTGTGAAAATTAATTAAGGCAGGATTTATGTGCGGATGTATTTAGTGTTCTACTTCATTGAGGGCTTGTAGAGGAAAATATTTGGCTTTTGTTTATGGAAATTGTGGACGCAGGAGAATTATAATTTGTTTTTGTACACAATGGGTGGAGTTTGTTCAAGAACGAGAAGAACTACTTCAGCTGTTATTGGTGGGCATACTGGTGTAGTAGGGGGTTCCACGCATGAAAATGGTCATTCTAACAATGAGTCGGGGATGGTTTATCGGTCTCGTGAACTGCCATCGAAAATTAGTGACTCCATACCGTCTGCTGTTGACGATGGCGTCAATAAGCCGTTGCGAGAACCGTTTTCGTTCCCTGAGGTGAATGTGGTTCCATATGGACTGGATGATATCAATGATGGAATTCCTCGCTTGTCTAGAACGTTATCTCAGAAATCTAGATCAACGAAGTCCAGACAAGCTGTTGCGAAGGTAAAAGCACCTAGGTTTTACTTGCAACTAGAACAGTTTAAGTAAATACTTTTAATTTTTATGAAATTCTGTTTACAGATTAGCAAAAATATTCACAAGGACTGTTTCTTGTATCTTTGTTAAAAAAAATGACTACAAAGAGCGGAACATTTTCGTATGGTTTTTCTTTTTATAGGACAATTTTCATAAAAATTTTCCTCATGAATTTAAACCAAACATCTTATCAAAGGAAAGATAAAGTCGAATATTCTCAATGCGACGCAATGAAGTGTCAAGGTTTATAAGAATTGTTTAATTATGGTGATACCCTTCTTACTCTACCAAGTGTATTTATTTCTTCTGAAATATTCATGCACATGACCTTAATAATTTTCTAACTACCAGAAGGGAGAGTTTACTTTTTGTCTTATGTGCTAGATTTAAATTTGAACCTATGATTTTGTTCTTCCAGGGAACTAGAATCTGATAGACAAATCAACATTATCACATCATTTTTTCTATGTCAACTCAAAAAAATTATATTTGTAATATAGGTATCAGAAATGAGCTCTCTTATAGGCAGAGCAGGTACCGTTGGGCTTGGAAAGGCTGTTGATGTTTTGGATACACTTGGTAGTAGTGTGACGAGTTTGAACCTTGGTAGTGGTTTCACCTCGGGGGTGGCAACGAAAGGGAACAAAATTTTAATCTTAGCTTTTGAAGTTGCCAACACCATTGTGAAGGGTTCTAGTCTAATGCATTCTCTCTCAGAGCATAACATTAGAGTTTTAAAGGAGGAAGTGCTTCCATCAGAAGGGGTCCAAAATTTAATATCAAGAGACATGGATGAACTCTTGAGAATTGCAGCAGCAGACAAGAGGTGGATAGTTTAG

mRNA sequence

TTGAAAGGCTATAATGGAGAGATTGAAGCTTCAAAATTTGTCGACATATGTTTTGTGGAGAATTATAATTTGTTTTTGTACACAATGGGTGGAGTTTGTTCAAGAACGAGAAGAACTACTTCAGCTGTTATTGGTGGGCATACTGGTGTAGTAGGGGGTTCCACGCATGAAAATGGTCATTCTAACAATGAGTCGGGGATGGTTTATCGGTCTCGTGAACTGCCATCGAAAATTAGTGACTCCATACCGTCTGCTGTTGACGATGGCGTCAATAAGCCGTTGCGAGAACCGTTTTCGTTCCCTGAGGTGAATGTGGTTCCATATGGACTGGATGATATCAATGATGGAATTCCTCGCTTGTCTAGAACGTTATCTCAGAAATCTAGATCAACGAAGTCCAGACAAGCTGTTGCGAAGGTATCAGAAATGAGCTCTCTTATAGGCAGAGCAGGTACCGTTGGGCTTGGAAAGGCTGTTGATGTTTTGGATACACTTGGTAGTAGTGTGACGAGTTTGAACCTTGGTAGTGGTTTCACCTCGGGGGTGGCAACGAAAGGGAACAAAATTTTAATCTTAGCTTTTGAAGTTGCCAACACCATTGTGAAGGGTTCTAGTCTAATGCATTCTCTCTCAGAGCATAACATTAGAGTTTTAAAGGAGGAAGTGCTTCCATCAGAAGGGGTCCAAAATTTAATATCAAGAGACATGGATGAACTCTTGAGAATTGCAGCAGCAGACAAGAGGTGGATAGTTTAG

Coding sequence (CDS)

TTGAAAGGCTATAATGGAGAGATTGAAGCTTCAAAATTTGTCGACATATGTTTTGTGGAGAATTATAATTTGTTTTTGTACACAATGGGTGGAGTTTGTTCAAGAACGAGAAGAACTACTTCAGCTGTTATTGGTGGGCATACTGGTGTAGTAGGGGGTTCCACGCATGAAAATGGTCATTCTAACAATGAGTCGGGGATGGTTTATCGGTCTCGTGAACTGCCATCGAAAATTAGTGACTCCATACCGTCTGCTGTTGACGATGGCGTCAATAAGCCGTTGCGAGAACCGTTTTCGTTCCCTGAGGTGAATGTGGTTCCATATGGACTGGATGATATCAATGATGGAATTCCTCGCTTGTCTAGAACGTTATCTCAGAAATCTAGATCAACGAAGTCCAGACAAGCTGTTGCGAAGGTATCAGAAATGAGCTCTCTTATAGGCAGAGCAGGTACCGTTGGGCTTGGAAAGGCTGTTGATGTTTTGGATACACTTGGTAGTAGTGTGACGAGTTTGAACCTTGGTAGTGGTTTCACCTCGGGGGTGGCAACGAAAGGGAACAAAATTTTAATCTTAGCTTTTGAAGTTGCCAACACCATTGTGAAGGGTTCTAGTCTAATGCATTCTCTCTCAGAGCATAACATTAGAGTTTTAAAGGAGGAAGTGCTTCCATCAGAAGGGGTCCAAAATTTAATATCAAGAGACATGGATGAACTCTTGAGAATTGCAGCAGCAGACAAGAGGTGGATAGTTTAG

Protein sequence

LKGYNGEIEASKFVDICFVENYNLFLYTMGGVCSRTRRTTSAVIGGHTGVVGGSTHENGHSNNESGMVYRSRELPSKISDSIPSAVDDGVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIGRAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMHSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKRWIV

Homology

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BLAST of Carg22646 vs. NCBI nr
Match: XP_022932530.1 (uncharacterized protein LOC111439029 [Cucurbita moschata])

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD
Sbjct: 1   MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
           GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG
Sbjct: 61  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 220

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BLAST of Carg22646 vs. NCBI nr
Match: XP_022976913.1 (uncharacterized protein LOC111477140 [Cucurbita maxima])

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVY+SRELPSKISDSIPSAVDD
Sbjct: 1   MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYQSRELPSKISDSIPSAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
           GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG
Sbjct: 61  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLG GFTSGVATKGNKILILAFEVANTIVKGSSLMH
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGGGFTSGVATKGNKILILAFEVANTIVKGSSLMH 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 220

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BLAST of Carg22646 vs. NCBI nr
Match: XP_023535280.1 (uncharacterized protein LOC111796758 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVY+SR+LPSKISDSIPSAVDD
Sbjct: 1   MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYQSRDLPSKISDSIPSAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
           GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG
Sbjct: 61  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLG GFTSGVATKGNKILILAFEVANTIVKGSSLMH
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGGGFTSGVATKGNKILILAFEVANTIVKGSSLMH 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 220

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BLAST of Carg22646 vs. NCBI nr
Match: XP_008461473.1 (PREDICTED: uncharacterized protein LOC103500062 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 3.2e-86
Identity = 185/220 (84.09%), Postives = 189/220 (85.91%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTS  IGGH+                  MVY+SR LPSKI+DS   AVDD
Sbjct: 1   MGGVCSRTRRTTSDDIGGHS-GEGGLTNANGHSNNESGMVYQSRGLPSKITDSTLPAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
             NK LREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG
Sbjct: 61  --NKSLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLG GFTSGVATKGNKI ILAFEVANTIVKGSSLM 
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGGGFTSGVATKGNKISILAFEVANTIVKGSSLMQ 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLS+ NIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSKRNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 217

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BLAST of Carg22646 vs. NCBI nr
Match: XP_004139704.1 (PREDICTED: uncharacterized protein LOC101220504 [Cucumis sativus] >KGN44425.1 hypothetical protein Csa_7G290480 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 182/220 (82.73%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTS  IGGH                   MVY+S  L SK +DS P AVDD
Sbjct: 1   MGGVCSRTRRTTSDDIGGH-IGEGGFTNANGHSNNESGMVYQSHGLTSKNTDSTPPAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
             NK LREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSR AVAKVSEMSSLIG
Sbjct: 61  --NKSLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRHAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLG GFTSGVATKGNKI ILAFEVANTIVKGSSLM 
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGGGFTSGVATKGNKISILAFEVANTIVKGSSLMQ 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLS+ NIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSKRNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 217

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BLAST of Carg22646 vs. TAIR10
Match: AT1G34320.1 (Protein of unknown function (DUF668))

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-40
Identity = 109/221 (49.32%), Postives = 130/221 (58.82%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGG+CSR+    +A  G                          ++ PS ++++    VDD
Sbjct: 1   MGGLCSRSSSVNNAPGGTFAHVNGHHLNNNASDLNSHSGESGLKDDPSPVTEN----VDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQK-SRSTKSRQAVAKVSEMSSLI 148
             NK   E FSFP V+   +   +I DGIPRLSR LSQK                     
Sbjct: 61  --NKHTSESFSFPIVSSGSHP-QNIEDGIPRLSRVLSQKXXXXXXXXXXXXXXXXXXXXX 120

Query: 149 GRAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLM 208
                 GLGKAVDVLDTLGSS+T+LNL  GF+S    KGNKI IL+FEVANTIVKG++LM
Sbjct: 121 XXXXXXGLGKAVDVLDTLGSSMTNLNLSGGFSSATTVKGNKISILSFEVANTIVKGANLM 180

Query: 209 HSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           HSLS+ +I  LKE VLPSEGVQNLIS+DMDELLRIAAADKR
Sbjct: 181 HSLSKDSITHLKEVVLPSEGVQNLISKDMDELLRIAAADKR 214

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BLAST of Carg22646 vs. TAIR10
Match: AT5G08660.1 (Protein of unknown function (DUF668))

HSP 1 Score: 151.8 bits (382), Expect = 5.8e-37
Identity = 95/156 (60.90%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 94  LREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQ-AVAKVSEMSSLIGRAGT 153
           L++ FSF E        D+  DGIP  +   SQK RS KS Q AV+KV+E S L+G+A  
Sbjct: 61  LKDVFSFREREAE----DNFYDGIPTYTMAPSQKIRSAKSTQTAVSKVTEASKLLGKA-- 120

Query: 154 VGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMHSLSE 213
            GLG+A DVLDTLGSS+T L+ G GFTSGVATKGN++ ILAFEVANTIVK S+L+ SLS+
Sbjct: 121 -GLGRAKDVLDTLGSSMTDLSSG-GFTSGVATKGNELGILAFEVANTIVKSSNLIESLSK 180

Query: 214 HNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
            NI  LK  +L SEGVQNL+S D DELLR+ AADKR
Sbjct: 181 RNIEHLKGTILYSEGVQNLVSNDFDELLRLVAADKR 208

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BLAST of Carg22646 vs. TAIR10
Match: AT1G30755.1 (Protein of unknown function (DUF668))

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24
Identity = 60/116 (51.72%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 134 RQAVAKVSEMSSLIGRAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGV-ATKGNKILIL 193
           R    K  + +S +GRAG +GL KAV+VLDTLGSS+T +N  + + SGV +++G K+ IL
Sbjct: 78  RNDSTKFMQRNSFMGRAGVMGLEKAVEVLDTLGSSMTRMNPSNAYLSGVTSSRGGKVTIL 137

Query: 194 AFEVANTIVKGSSLMHSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           AFEVANTI KG++L+ SLSE N++ +K+++L SE V+ L+S D  EL  +AA+DKR
Sbjct: 138 AFEVANTIAKGAALLQSLSEENLKFMKKDMLHSEEVKKLVSTDTTELQILAASDKR 193

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BLAST of Carg22646 vs. TAIR10
Match: AT3G23160.1 (Protein of unknown function (DUF668))

HSP 1 Score: 48.9 bits (115), Expect = 5.3e-06
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 191 ILAFEVANTIVKGSSLMHSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADK 248
           IL+FEVAN + K   L  SLS+  I  LK EV  SEGV+ L+S D + LL ++ ++K
Sbjct: 45  ILSFEVANVMSKTIHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEK 101

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BLAST of Carg22646 vs. TrEMBL
Match: tr|A0A1S3CG34|A0A1S3CG34_CUCME (uncharacterized protein LOC103500062 OS=Cucumis melo OX=3656 GN=LOC103500062 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.1e-86
Identity = 185/220 (84.09%), Postives = 189/220 (85.91%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTS  IGGH+                  MVY+SR LPSKI+DS   AVDD
Sbjct: 1   MGGVCSRTRRTTSDDIGGHS-GEGGLTNANGHSNNESGMVYQSRGLPSKITDSTLPAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
             NK LREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG
Sbjct: 61  --NKSLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLG GFTSGVATKGNKI ILAFEVANTIVKGSSLM 
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGGGFTSGVATKGNKISILAFEVANTIVKGSSLMQ 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLS+ NIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSKRNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 217

[Close]

BLAST of Carg22646 vs. TrEMBL
Match: tr|A0A0A0K402|A0A0A0K402_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290480 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.0e-84
Identity = 182/220 (82.73%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGGVCSRTRRTTS  IGGH                   MVY+S  L SK +DS P AVDD
Sbjct: 1   MGGVCSRTRRTTSDDIGGH-IGEGGFTNANGHSNNESGMVYQSHGLTSKNTDSTPPAVDD 60

Query: 89  GVNKPLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRQAVAKVSEMSSLIG 148
             NK LREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSR AVAKVSEMSSLIG
Sbjct: 61  --NKSLREPFSFPEVNVVPYGLDDINDGIPRLSRTLSQKSRSTKSRHAVAKVSEMSSLIG 120

Query: 149 RAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSSLMH 208
           RAGTVGLGKAVDVLDTLGSSVTSLNLG GFTSGVATKGNKI ILAFEVANTIVKGSSLM 
Sbjct: 121 RAGTVGLGKAVDVLDTLGSSVTSLNLGGGFTSGVATKGNKISILAFEVANTIVKGSSLMQ 180

Query: 209 SLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           SLS+ NIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 SLSKRNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 217

[Close]

BLAST of Carg22646 vs. TrEMBL
Match: tr|A0A067KHV5|A0A067KHV5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11970 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 152/223 (68.16%), Postives = 173/223 (77.58%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKISDSIPSAVDD 88
           MGG+CSR+    +A  GG                    +VY+SREL    + +    V++
Sbjct: 1   MGGLCSRSSNVDNAPGGG---------FPHVNGHYASGLVYQSRELKISTNTAPSPVVEN 60

Query: 89  GVNKPLREPFSFPEVNVVPYGL--DDINDGIPRLSRTLSQKSRSTKSRQ-AVAKVSEMSS 148
             NKP+REPFSFPEVNVVPYG+  DDI+DGIPRLSR LS KSRSTKS+Q AVAKVSEMSS
Sbjct: 61  VENKPVREPFSFPEVNVVPYGMNPDDIDDGIPRLSRALSNKSRSTKSKQVAVAKVSEMSS 120

Query: 149 LIGRAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGSS 208
           L+GRAGTVG GKAV+VLDTLGSS+T+LNL SGFTSGV TKGNKI ILAFEVANTIVKG++
Sbjct: 121 LLGRAGTVGFGKAVEVLDTLGSSMTNLNLNSGFTSGVTTKGNKISILAFEVANTIVKGAN 180

Query: 209 LMHSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           LM SLS+ NI+ LKE VLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 LMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKR 214

[Close]

BLAST of Carg22646 vs. TrEMBL
Match: tr|W9QXD0|W9QXD0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016434 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.6e-65
Identity = 153/224 (68.30%), Postives = 173/224 (77.23%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKI-SDSIPSAVD 88
           MGG+CSRTRR++S                         +   S  LP K+ S+S PS+  
Sbjct: 1   MGGICSRTRRSSSI-----DNANVNNAPSGSYPHSNGHLGNGSYALPMKLDSNSTPSSAG 60

Query: 89  DGVNKPLREPFSFPEVNVVPY--GLDDINDGIPRLSRTLSQKSRSTKSRQ-AVAKVSEMS 148
           + ++  LR+PFSF EVNVVPY  GLDD NDGIP LSRTLSQKSRSTKS+Q AVAKVSE+S
Sbjct: 61  NSMDMQLRDPFSFQEVNVVPYKIGLDDTNDGIPHLSRTLSQKSRSTKSKQVAVAKVSEVS 120

Query: 149 SLIGRAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGS 208
           SL+GRAGTVGLGKAV+VLDTLGSS+T+LNL SGFTSGV TKGNKI ILAFEVANTIVKGS
Sbjct: 121 SLLGRAGTVGLGKAVEVLDTLGSSMTNLNLSSGFTSGVTTKGNKISILAFEVANTIVKGS 180

Query: 209 SLMHSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           +LM SLS+ NIR LKEEVL SEGVQNLISRDMDELLRIAA+DKR
Sbjct: 181 NLMESLSKDNIRRLKEEVLISEGVQNLISRDMDELLRIAASDKR 219

[Close]

BLAST of Carg22646 vs. TrEMBL
Match: tr|A0A1U8K6Z7|A0A1U8K6Z7_GOSHI (uncharacterized protein LOC107914054 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107914054 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.7e-64
Identity = 146/224 (65.18%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 29  MGGVCSRTRRTTSAVIGGHTXXXXXXXXXXXXXXXXXXMVYRSRELPSKI-SDSIPSAVD 88
           MGG+CSR     +A  GG                    +V+++RELP+KI + S P   +
Sbjct: 1   MGGLCSRRSTVDNAPCGG-------FPHVNGHIGQRTGLVFQTRELPAKINAKSNPPPAE 60

Query: 89  DGVNKPLREPFSFPEVNVVPYG--LDDINDGIPRLSRTLSQKSRSTKSRQ-AVAKVSEMS 148
           D  +K   EPFSFPE++  PYG   DDINDGIPRLSR LS KSRSTKS+Q   AKVSE+ 
Sbjct: 61  DNADKVSGEPFSFPEISTAPYGTSADDINDGIPRLSRVLSDKSRSTKSKQVTAAKVSEVG 120

Query: 149 SLIGRAGTVGLGKAVDVLDTLGSSVTSLNLGSGFTSGVATKGNKILILAFEVANTIVKGS 208
           SL+GRAGT GLGKAV+VLDTLGSS+T+LNL SGFTSGV TKGNKI ILAFEVANTIVKG+
Sbjct: 121 SLLGRAGTAGLGKAVEVLDTLGSSMTNLNLSSGFTSGVTTKGNKIAILAFEVANTIVKGA 180

Query: 209 SLMHSLSEHNIRVLKEEVLPSEGVQNLISRDMDELLRIAAADKR 249
           +LM SLS  NIR LKE VLPSEGVQNLISRDMDELLRIAAADKR
Sbjct: 181 NLMQSLSNENIRHLKEVVLPSEGVQNLISRDMDELLRIAAADKR 217

The following BLAST results are available for this feature:

BLAST of Carg22646 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932530.1	1.4e-100	100.00	uncharacterized protein LOC111439029 [Cucurbita moschata]	[more]
XP_022976913.1	1.2e-99	99.09	uncharacterized protein LOC111477140 [Cucurbita maxima]	[more]
XP_023535280.1	2.6e-99	98.64	uncharacterized protein LOC111796758 [Cucurbita pepo subsp. pepo]	[more]
XP_008461473.1	3.2e-86	84.09	PREDICTED: uncharacterized protein LOC103500062 [Cucumis melo]	[more]
XP_004139704.1	3.0e-84	82.73	PREDICTED: uncharacterized protein LOC101220504 [Cucumis sativus] >KGN44425.1 hy...	[more]

BLAST of Carg22646 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34320.1	9.5e-40	49.32	Protein of unknown function (DUF668)	[more]
AT5G08660.1	5.8e-37	60.90	Protein of unknown function (DUF668)	[more]
AT1G30755.1	2.5e-24	51.72	Protein of unknown function (DUF668)	[more]
AT3G23160.1	5.3e-06	47.37	Protein of unknown function (DUF668)	[more]

BLAST of Carg22646 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22646 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CG34\|A0A1S3CG34_CUCME	2.1e-86	84.09	uncharacterized protein LOC103500062 OS=Cucumis melo OX=3656 GN=LOC103500062 PE=...	[more]
tr\|A0A0A0K402\|A0A0A0K402_CUCSA	2.0e-84	82.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290480 PE=4 SV=1	[more]
tr\|A0A067KHV5\|A0A067KHV5_JATCU	1.7e-67	68.16	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11970 PE=4 SV=1	[more]
tr\|W9QXD0\|W9QXD0_9ROSA	1.6e-65	68.30	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016434 PE=4 SV=1	[more]
tr\|A0A1U8K6Z7\|A0A1U8K6Z7_GOSHI	6.7e-64	65.18	uncharacterized protein LOC107914054 isoform X1 OS=Gossypium hirsutum OX=3635 GN...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021864	DUF3475

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22646-RA	Carg22646-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021864	Protein of unknown function DUF3475	PFAM	PF11961	DUF3475	coord: 191..247 e-value: 8.2E-26 score: 89.8
None	No IPR available	PANTHER	PTHR31730:SF2	SUBFAMILY NOT NAMED	coord: 29..248
None	No IPR available	PANTHER	PTHR31730	FAMILY NOT NAMED	coord: 29..248

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22646	Cla016370	Watermelon (97103) v1	carwmB0007
Carg22646	Csa7G290480	Cucumber (Chinese Long) v2	carcuB0006
Carg22646	ClCG09G010390	Watermelon (Charleston Gray)	carwcgB0005
Carg22646	CSPI07G12210	Wild cucumber (PI 183967)	carcpiB0006
Carg22646	Cucsa.079910	Cucumber (Gy14) v1	carcgyB0004
Carg22646	CmaCh09G011480	Cucurbita maxima (Rimu)	carcmaB0007
Carg22646	CmoCh09G011590	Cucurbita moschata (Rifu)	carcmoB0007
Carg22646	Lsi02G019470	Bottle gourd (USVL1VR-Ls)	carlsiB005
Carg22646	Cp4.1LG06g09170	Cucurbita pepo (Zucchini)	carcpeB0006
Carg22646	CsGy7G011370	Cucumber (Gy14) v2	carcgybB0005
Carg22646	CsaV3_7G024220	Cucumber (Chinese Long) v3	carcucB0006
Carg22646	Cla97C09G173110	Watermelon (97103) v2	carwmbB0005
Carg22646	Bhi09G001321	Wax gourd	carwgoB0007

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None