Carg22607 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22607
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Gamma-secretase subunit
Location	Cucurbita_argyrosperma_scaffold_093 : 192887 .. 200699 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTGGATTTACACGGTGCCACTGAAGCTTCTTCAACCTTCAACTATCCGAATATCGGTCTCCAACAAAAGGTCACAGGGCCGGGTTCGAAGGAAGAAGGCGATGACTGTAGCAGCAGGGATCGGCTACACCTTGATAGCGTTGGGCCCTTCTCTCTCCCTTTTCATCTCCGTCATTGCTCACAAGCCTTTCTTGATTCTCACTCTCCTCTCCAGGTACTTCTCCGTTTCCAATTTGATTTCTGCTATCATTCCGCCTCAATAATCTTCAATAATGGCCTTCTCTCGGTCTTCATGCTATTGTTTTGCTTGATCATTTTCTTTTGTTCTATTCTGATCGCGCCTTTTCTAGTTCATTTTTCCCTTCGCTTTCTTAGCTATCAATTAGGATCGCAGGTAAGCTGTGTGAGTTGTGTAATCGGCAGAGGAAATGAAGGCTGTTGCAGATTGTATTTTAATTTTTTTTTATTGTTTATAGATTTTCTTTCGCTAGTAAGCTTCACGTATTTTGTTCGAGCTTTTTAGGTTGGATAGGTTGCCAATTTAACCACTCGACTTCTGGATTTTAAAAACTTTTAAGTTTAGTTCTATGCGACACAGTCTATTAAAAGATGTGATGAGTTGGTTTGGAAAAGAGATGTAGCAATTGTCACTTTATTTTATCGAATTTCCGGTTTATTTCTATAATTTGTTCCCAACTTTGTGTTGAATCGACTAATTTTTGTCCAATACACAGTTTATGCCATCGTTTAGACAACTGTGTTGTTAATAGCAGTGAATAAGTCGAATTACAATTCAAAGTTTAGAATGAAATTGAAACTTGTTAAAGTTTGAATTATATAGGCACAAATATCAAAATTTAGCTATTACATTCTTAATTTAACCTCTAGATCCTCTTTTGAAGTTGCTAAGCGGTATCTGCAGGGGGAGCACGAGTAGTTTGATTGGAAAATGAACTTTTTGTTGGCCGCCATTTTGTTTAATCAGATGATATTTCATGGTTATTATTGTTCGTGTGTGCAGCACCCTGTTATGGCTCATTAGTTTGATACTGCTGTCTGCGTTATGGAGGGGCTTTCTTCCACTGAACTCAACAATATTGTGGCCTTATGCAACTCTTATATTGACATCAGTCATTTTTCAAGAAGCTCTACGGGTTCTTTTCTGGAAAGTCTACAGGTGAGTTAATATTAACATCTCAATATCACTTGGAGAGTCTAGGAAGTAATGATTGAAGGGCTGAATCCCACAATTCAAAATCATCTCTAAGTACTTGCAATTGTCATCTGGAGCTGAAGCTTAAAGTAGAAAGGAAAGTCACACTTTAGGAAGATAATAATAGTAATAACAATAGCTGTATTCATTGGAAATTGTAGTATTATTAGTAATTAGGTTTGAAAAAAATTTAGAAGGAAGGTTCTTCTAAAATGTAGGTGTTATGCAACATACCTTGAAAAAGTTTGATGGCCTGCACCTCTTTGAGCGCTGAGGTGTGATGCCTCACCTTCTTAGTATGAACACTGTTTAAAATCTGTTATAATAACTTGCTATAGACTATGGGAATTGAAAATATGTAGGTTAGATTGGGTTTATTGAGGAAGACTCAAATTTAAATGATTTGTGTCAATGCATCAAGAGGAAGAGTCTACGAAGCAGTGAAGAAATTGCTAAAATGTTTATTATTATAGATAACCATGTTTGGGCTTTTTATGCATGAGCTGCTGCTTAAAACTTAACCAGTAGCCAACTGATCACCGAACTTTCAAGCCTTATTACCATTGAACCAACATATTACACATACTAGTATATATGAAGACAGAGTTCAAGGTTTTTTTACTAAGCTATGAAGGAGTTATCTTTAGGTTTTATTAGATGATTAATATGTGATATATTGATACTCTTTTAGTGGAAAATTAGGCCAAAATTGGAAAAAGGGTGCCTTTTGACTTCGATAGATAAGTGATGGATTCATTGATTAAATTTCTCCATTAGTTCAGTGTTTAGGTTGAGCAGCCATTATTGTACATCTTTTAATTTTTTGTTCTATTGTTAATGCTTACGGTTACAGTCCTTTTTATTATCACCTTTTATTTTTAGAATATTATATCATATGTGAGGTGGAGTATGGACCCCTTAGAGACTGAGATATCTTAACTGCTGAGTTATTCTTATATTGGCCCTTTTTTATGTAGTTTTTTTTTTCTTTGGGAGATAAAAAAAACAAAAAAAATTAGTTAATACATATATATGCACATATTTTTTAATCTCCATATTTACATTTACTAGTGTCTACAAAGAAATCAAAACACAATCATCTTCTTATTCATTCTAGAGTTTAAATTAGAACTGCCCAACTCTCCTAGAATTGGTAGATCTATTTGGCCTTTACTATTAGGTTTTATCTGATTGGGGGAGTAGCAATCCACAATCCAGGATCATTTTTTTTCTTCCTTCCATGTCTGTAGGTTACTAATTGGAGTCCTCTTACAAGTACTAATATCTTTCTGAAATATTGCAGCCTGCTCACTTTTGGCTATTTTTCGTACCCTTCGTGTCTGCTACTTGAAAATTGTCATTGATTTATTTATTTTTTCTTTTATAATATACGTGGACTATCAATTAGATTCTAAACTAAAGTAACAGTTTCCTATAGAGTTTGTAATTGTTTAGCTATAAACAATGATATACCTACGATGTCTCTGCTATTGAATTTTATAGGAAATTAGAAGACATGTTAGATGCTTTCGCTGACAGAGTTTCAAAGCCGCGTCTATATTTGACAGATAAGATGCAGATTGCTCTAGGTAAACTTTGATCACCCATGATTTAACTTATAACCTTTTGTTTCATTACAATTAGTTTCTATATAGCAAGATTTTAAAACTTTGGTAGTACGTTCTTCCTATATAAATTAAAACCATGCAAAATGAGAAAAACCATGAGGCAGAATGGTAAGTCCTGCTTCAAAATACAAGAAAATATGCAAGAGAAAGAACCAATGTAATCTCCATTCCCAATTCTCTTATTAAAGGAAGCTGAAGACGGAACTTAATCGAGAAATAAATTCAACCCAAATCACTTAGGTTTAAGGTGTGCGATGCTCCAAGTCACTTATTTGCAAGAAACATCTTCAAACATCCTTGTGATTTGCTCCAACCAAATACTCCATGCAATAACCGAACAGCCTACTCCACCAGATCTTACTGAACAGCCAACTTCTAACAGATAACTAATAACTCAAACCATCCCCACAGACCAAGTTACATGCAAAGACAAACCCTATCTGAAAACATTTGGGCTATATGCACACTGCAGAAGAACAATGCACCAGTATACAGTTGTGTCGTGAGAGCCCCTTTACTCAGAATGCTACAGGGGGATGAAGATCAATAGAAACATTTCTTTGGGTGATGACAATAGTATTACTTCTCCCGACTGTAAAGTTACAGCCTGATTTTAAAAAATATGGAATCTTAAATTCTGACAAGAATTCTAATTGTGGAAACTTAGATTTAGACACCGAGCACATTGAAAAAAAGACCTTCCTAAAAGTTGCAGCCTTACTCAAGCGTCTTATTGAGTGAGGCAGACAAGAGTTGTCTCTGTATTGGAGGTAATCAGACTAACTGCACAGTCAAATGTCCTAAAGTTGAATGACATTTATAATTGCTCTCCCCTACCTTGAAAAGACAATAATTTGTGAACTGAGGGCCCAGTGATTTTAGCATTTTACCAAGTTTCCCAACCGTCTTCATTTTCTAATCTTACATGAGCTCTAACGTGCACTTCTTAATTGCTTGCAGCTGGGGGCTTAGGTCATGGTGTAGCTCATGCCGTGTTTTTCTGTCTTAGCCTTCTAACACCATCATTTGGTCCAGCCACTTACTTTGTTGATCGGTGCTCCCAGCTACCATTTTTTCTCGTCTCTGGTGAGTTCTTACTCATATTATTTGTGTAAATACTTTGTATACCTCTGTGAGCTATATATTGTCCAAAAAATTAGGTCATTATTGTCATTCTCTACTTTTCAAAAAGCCTTGCATTCGATTCCAGCTATTCTGAGAGTTCATTTGTTCCCATGGCATATTTCTGATCGTTAATTTCTTGAACATTTTAAGAGTTGCAAATGGATCACTATTATTCTACTTTTTTTCACTTAACGTTTTTCACTGAAGGCGACTTATCTAGCTGTATTTTGCTGATAACCCTGCAGCTATCATTGCTCTTGCATTTGTCACTATCCATACTTTCTCTATGGTCATTGCATTCAATGGATATTCAGAGGGGAAGAAAGTGGACCAGTATTTTGTTCCAGTCATCCATCTTGCCGCAGGAATGGTGGTAAAACCCCAATCTTATTCTGGATCGTTATTTTTTTTTCCACGTCTAGTTTATTTATATGAAGAAAAGTAGCGCTTTCACCTTAGTGCTCATCGTGTAGATTTTACAATCAAGCCCTTTCTACTTGGATTTTTTTATTTTTTATTTTTTATTTATTTTTAGTAAGAGAACATATTTCAAAGGGAAAAACAAGAAACAACCTAATGGCCGACGAAGAGAGACTAATGGCCGACGAAGAGAGAACCACCACCAACAAAAGCTACAATATTGCATCCCCAACTAACTTTTACAAGAATAATTTTGATTACAAACGATTTTGTGAAGAGAACTCCATTTCGAGGCCGAATACTTTGTTCAAAATCACAAATATTATCCTTGTGTTTGTGTTTCTAGCTATCAGCATAAAAATTTATAGTTTCGTGCAATCCTCAAGGAGAATAACAAGAGGGCCATCTGCGCATCTCCATGAAACCCCATCTCTTTCATTTGACCACCACCCTTCAAGAATATCATCTGGAAAACAACAAATCTAGCTAAAATTCTGCCGGAGAAAATGCCACCCCTCATATAAGTACAATGGATGAGTAGTTGATCAAAAGGGTTCCTCATCCTTATAGCATTAATAGCGAACTCTGAGAGACTGAGCTCCTTGACTATGAGCGTTTCTTCTTTGCAATCTTTCCTGAGTGCCTAAATTTCTGCAACCAGGACTGGGGAATAAAATTTTCTTTAGCACCCTTACTTCTCAGTAAGCGTATCATCGGTGATCACGGAGTTTTCAGCTTAGGCGCTCTAGAAATTAACTGAAAATAGGCAGATTCACAACTAAAAGAGCCCTAATTGTCGAAGCACCAAACCAGCCAGTGTCTTCCTAGTCAAACCTAGTCATATGAACCTTGTCTCGTGGCCATTTAGGGTGCTAAGTGAAATTATTAAGTTTAAAGTTGTTCAGTCTGTGAAGTTAAATAATCTGTGTTTGGGATGTATAGAGTTTTTTGGTTTGAGTTTGAAATTTCGTGTTTAGGATGCAAAGTTGTTATATATGGAGTTATGAACTTTGTGTTTATGCGTGCTATTTTTTTCTACATTTTTTGTTGTCCTGTACAATTAGAGCTATATTAGATACCAATTTTCCAAAATTTAAATAATAATTGATATAAAAGATTGTTGAGAAAAATCTTTTATTCCAATTTTAACTCCAACTCCATTGCACATCTAGAAATTTAGCATTTTGTGGTTAAACTTGGTACCATATTGTAACTTCATTTTTTTATGACTGTTCTATTTATCTATGATTTCAAAACCTAATAAATTTTAAGCAAAATTTGTTGTTTACTATCCTATGAAGTTAAATTATATTTTTATATAAGAAAAATCATGACATGGACGGTTATATTTTGCTAATTTTCTAATAATTTTACAATTATCATTTAAACACAAATTTTAAAAATCTATGTGCAAGTATTCATCATTGTTGTATTCACTAGTGACACATCCTCTCCATCTTTGTACTTCAAACTTATTGAAAGTTGAATACCTATTAGAAATATTAAGTTTAGGGACTAAATTTGTTATTTAATATTTATTTATTTATTATTTTTTCTAATAGGGGTTGGTATCCAGCCAAATCTTTTCAATCAATTGTTTAGTTTACTGGAAATATTTGTAGTTGCCATAAAAAGGCTCAAGGTTCTCAACATCATTGTCGTAGCATAGTTACTAATGAAGCCTTGAATATTCTTGATTGTTAATGATCTTCTTGAAAGATATTCATTATGATTCAAAACTTTATTTCCATTCTGCCAATATTGCACTCTTGTCCTCTCCTTTGCACTCGTAGCTGTCAGCTTAAGCCGACACGTTTTGCCTTTAAACTCACCCCAAGAAATGTTCTGTACTTCAAGCATTTGAAATTCATACATTAAGATCAGTACATCGTGGATCATATGTTTATGCCTCCTAATCTTTGAAGCATTTTTAGAATTCCTCAGCCTTCATATAATTTAGTAATTGTTGAATTTAAGACAAATAACACGGCCCTCTTACTTTGATCCAGCATTTCAGAAACTAGTAAACAACCAGCCAATTCCATTACTTGGTTATGCCGTATTATATCCGATCTGATATTTCACCTGATCATCATTTCTTAGTTTAGTGTTTCTTTGGGAGGAAAAATCAAGTTGACCCCTAAACTTGTAAAGTTGTATCAATTTTTTTTCTTAAAATTTTCGAACCTTAAACTTTCTATTTCATCAAATTGCACCTCAAACTTAGATGAGTGTTGCCATCTTAACTTTAACCTTTAACAAATTCTTGCTCCAAATATTGTTAACCTTTAGTTTTAACTTTTTTCTTCTTTTTTTTTTTTTTGGCTAAAATTAGTAGGGCTGGTGAAAATTGAACTACAGATAAAAATAGCAGACTCTTGGTTAAGCTTTAGATCCAAATTGATAAGATTGAAATCTTTTAGTGTTCAAATTGATAGAGGTCAAAATAGGTTTGCCCCTTTTCTTTATTATAATTCTAATTCATATTTCTCTTTTTGTTTCCAGACGCTGGTAAACTTTGCATCTGGAGGTTGTGTAATTGGTATCCCTCTGCTATATATAATGGCAAGTCTAACCTTGATTCACAGTGGGAAAATGGTTTGGAGAAGATTGATGGAAAGCCGAAGTAGCCAAGGTAGTCGGTAACATCGTTAACCCTTCTTCTGCAGTAATATTGCTAACTCAGCATCTTGAAGAAGGTATCTTCGAGAGAACATCTATTCCCCATGTTTGTTCGTCTATTATTCATTCGGGAATCTGCAAGTGAAAACACCCGTATTTTTCGATGAACACGGCAAACTCGACTTCATAGCCTATGGAAATGTCATTTGTTTCTTCTGAACAAGAATCCAGCATTAACATGATAACACATTTCTTAAAAGTACTGATTACATTTCTGTATTACTTATGGTTTCTTCAACTGTCGACTCAGATTTTGTGCTGAAGGCAAAGGGTATTGGCTGCAGCCTTCACTCAAAAGGTGAATGATTCTGCTATGGTCATAAACGAGACAACCGAACAATGCTTAAATGGATAAATACTTGAAACCACATGTAATAGACTCACAATGGTTTTTTGATTTAGAAATTCTTTTTTGTTAAATGACCTAACACCACAAAATTGGTCTATAAATCAAAAAATAGACATTACATTGGAGAACGTGTTGAGATAAATATTTGAAAGTTGAAGGACTAAACTGAAAATTAATACAAATTTGGACCTAAATAGGTTCTTAAGCTAAACTTTACAAGGTTTTAACATATATTGACAGGTGAACAAATCACAAACAGTGTACTTGGCAGGATGGTCATATACATTTCTAGTTCTAGTCTGGGGAACAAGGTGTGAGGTTAGGTGATCTTGTCTGAGAAAAAAAGGAAATATACTTGACAAAAAAAATTAAATGTTACAAATATCAATAAAGT

mRNA sequence

GATTTGGATTTACACGGTGCCACTGAAGCTTCTTCAACCTTCAACTATCCGAATATCGGTCTCCAACAAAAGGTCACAGGGCCGGGTTCGAAGGAAGAAGGCGATGACTGTAGCAGCAGGGATCGGCTACACCTTGATAGCGTTGGGCCCTTCTCTCTCCCTTTTCATCTCCGTCATTGCTCACAAGCCTTTCTTGATTCTCACTCTCCTCTCCAGCACCCTGTTATGGCTCATTAGTTTGATACTGCTGTCTGCGTTATGGAGGGGCTTTCTTCCACTGAACTCAACAATATTGTGGCCTTATGCAACTCTTATATTGACATCAGTCATTTTTCAAGAAGCTCTACGGGTTCTTTTCTGGAAAGTCTACAGGAAATTAGAAGACATGTTAGATGCTTTCGCTGACAGAGTTTCAAAGCCGCGTCTATATTTGACAGATAAGATGCAGATTGCTCTAGCTGGGGGCTTAGGTCATGGTGTAGCTCATGCCGTGTTTTTCTGTCTTAGCCTTCTAACACCATCATTTGGTCCAGCCACTTACTTTGTTGATCGGTGCTCCCAGCTACCATTTTTTCTCGTCTCTGCTATCATTGCTCTTGCATTTGTCACTATCCATACTTTCTCTATGGTCATTGCATTCAATGGATATTCAGAGGGGAAGAAAGTGGACCAGTATTTTGTTCCAGTCATCCATCTTGCCGCAGGAATGGTGACGCTGGTAAACTTTGCATCTGGAGGTTGTGTAATTGGTATCCCTCTGCTATATATAATGGCAAGTCTAACCTTGATTCACAGTGGGAAAATGGTTTGGAGAAGATTGATGGAAAGCCGAAGTAGCCAAGGTAGTCGGTAACATCGTTAACCCTTCTTCTGCAGTAATATTGCTAACTCAGCATCTTGAAGAAGGTATCTTCGAGAGAACATCTATTCCCCATGTTTGTTCGTCTATTATTCATTCGGGAATCTGCAAGTGAAAACACCCGTATTTTTCGATGAACACGGCAAACTCGACTTCATAGCCTATGGAAATGTCATTTGTTTCTTCTGAACAAGAATCCAGCATTAACATGATAACACATTTCTTAAAAGTACTGATTACATTTCTGTATTACTTATGGTTTCTTCAACTGTCGACTCAGATTTTGTGCTGAAGGCAAAGGGTATTGGCTGCAGCCTTCACTCAAAAGGTGAATGATTCTGCTATGGTCATAAACGAGACAACCGAACAATGCTTAAATGGATAAATACTTGAAACCACATGTAATAGACTCACAATGGTTTTTTGATTTAGAAATTCTTTTTTGTTAAATGACCTAACACCACAAAATTGGTCTATAAATCAAAAAATAGACATTACATTGGAGAACGTGTTGAGATAAATATTTGAAAGTTGAAGGACTAAACTGAAAATTAATACAAATTTGGACCTAAATAGGTTCTTAAGCTAAACTTTACAAGGTTTTAACATATATTGACAGGTGAACAAATCACAAACAGTGTACTTGGCAGGATGGTCATATACATTTCTAGTTCTAGTCTGGGGAACAAGGTGTGAGGTTAGGTGATCTTGTCTGAGAAAAAAAGGAAATATACTTGACAAAAAAAATTAAATGTTACAAATATCAATAAAGT

Coding sequence (CDS)

ATGACTGTAGCAGCAGGGATCGGCTACACCTTGATAGCGTTGGGCCCTTCTCTCTCCCTTTTCATCTCCGTCATTGCTCACAAGCCTTTCTTGATTCTCACTCTCCTCTCCAGCACCCTGTTATGGCTCATTAGTTTGATACTGCTGTCTGCGTTATGGAGGGGCTTTCTTCCACTGAACTCAACAATATTGTGGCCTTATGCAACTCTTATATTGACATCAGTCATTTTTCAAGAAGCTCTACGGGTTCTTTTCTGGAAAGTCTACAGGAAATTAGAAGACATGTTAGATGCTTTCGCTGACAGAGTTTCAAAGCCGCGTCTATATTTGACAGATAAGATGCAGATTGCTCTAGCTGGGGGCTTAGGTCATGGTGTAGCTCATGCCGTGTTTTTCTGTCTTAGCCTTCTAACACCATCATTTGGTCCAGCCACTTACTTTGTTGATCGGTGCTCCCAGCTACCATTTTTTCTCGTCTCTGCTATCATTGCTCTTGCATTTGTCACTATCCATACTTTCTCTATGGTCATTGCATTCAATGGATATTCAGAGGGGAAGAAAGTGGACCAGTATTTTGTTCCAGTCATCCATCTTGCCGCAGGAATGGTGACGCTGGTAAACTTTGCATCTGGAGGTTGTGTAATTGGTATCCCTCTGCTATATATAATGGCAAGTCTAACCTTGATTCACAGTGGGAAAATGGTTTGGAGAAGATTGATGGAAAGCCGAAGTAGCCAAGGTAGTCGGTAA

Protein sequence

MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLNSTILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAGGLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFNGYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLMESRSSQGSR

Homology

[Close]

BLAST of Carg22607 vs. NCBI nr
Match: XP_023549211.1 (gamma-secretase subunit APH1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.0 bits (1203), Expect = 2.0e-128
Identity = 247/249 (99.20%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           STILWPYA LILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STILWPYAILILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIH GKMVWRRLM
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHCGKMVWRRLM 240

Query: 241 ESRSSQGSR 250
           ESRSSQGSR
Sbjct: 241 ESRSSQGSR 249

[Close]

BLAST of Carg22607 vs. NCBI nr
Match: XP_022929902.1 (gamma-secretase subunit APH1-like [Cucurbita moschata])

HSP 1 Score: 467.6 bits (1202), Expect = 2.6e-128
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGYTLIALGPSL+LFISVI HKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVAAGIGYTLIALGPSLALFISVIGHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIH GKMVWRRLM
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHCGKMVWRRLM 240

Query: 241 ESRSSQGSR 250
           ESRSSQGSR
Sbjct: 241 ESRSSQGSR 249

[Close]

BLAST of Carg22607 vs. NCBI nr
Match: XP_022992373.1 (gamma-secretase subunit APH1-like [Cucurbita maxima])

HSP 1 Score: 464.9 bits (1195), Expect = 1.7e-127
Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           STILWPYA LILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STILWPYAILILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSE KKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIH GKMVWRRLM
Sbjct: 181 GYSEKKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHCGKMVWRRLM 240

Query: 241 ESRSSQGSR 250
           ESRSSQGSR
Sbjct: 241 ESRSSQGSR 249

[Close]

BLAST of Carg22607 vs. NCBI nr
Match: XP_008445715.1 (PREDICTED: gamma-secretase subunit APH1-like [Cucumis melo])

HSP 1 Score: 454.1 bits (1167), Expect = 3.0e-124
Identity = 236/249 (94.78%), Postives = 243/249 (97.59%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTV+AGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVSAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           ST+LWPY  LILTSVIFQE LRVLFWKVYR+LEDMLDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STVLWPYVILILTSVIFQEVLRVLFWKVYRRLEDMLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHG++HAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGISHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMA LTLIH GKMVWRRLM
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMAILTLIHCGKMVWRRLM 240

Query: 241 ESRSSQGSR 250
           E+RS QG+R
Sbjct: 241 ENRSRQGNR 249

[Close]

BLAST of Carg22607 vs. NCBI nr
Match: XP_022150431.1 (gamma-secretase subunit APH1-like isoform X1 [Momordica charantia])

HSP 1 Score: 451.4 bits (1160), Expect = 1.9e-123
Identity = 235/249 (94.38%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGYTLIALGPSLSLF+SVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVAAGIGYTLIALGPSLSLFVSVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           STILWP+A LI TSV+FQEALRVLFWKVYRKLED LDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STILWPHAVLISTSVVFQEALRVLFWKVYRKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFF VSAI+ALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFFVSAIVALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMA LTLIH GKMVWRRLM
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMAILTLIHCGKMVWRRLM 240

Query: 241 ESRSSQGSR 250
           E+R+ QG+R
Sbjct: 241 ENRNRQGNR 249

[Close]

BLAST of Carg22607 vs. TAIR10
Match: AT2G31440.1 (INVOLVED IN: positive regulation of catalytic activity, protein processing)

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-91
Identity = 172/248 (69.35%), Postives = 204/248 (82.26%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGY L+ALGPSLSLF+SVI+ KPFLILT+LSST                     
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
                  A L++TSV FQE LR LFWKVY++LED+LD+FADR+S+PRL+LTDK+QIALAG
Sbjct: 61  XXXXXXXALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++V+RCS++PFFL+SAIIALAFVTIHTFSMVIAF 
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GY++G KVDQ  VPVIHL AGM+TLVNFAS GCVIG+PLLY++ASLTL+H GKMVW+RL+
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240

Query: 241 ESRSSQGS 249
           ESR+   +
Sbjct: 241 ESRNQSSA 248

[Close]

BLAST of Carg22607 vs. Swiss-Prot
Match: sp|Q8L9G7|APH1_ARATH (Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana OX=3702 GN=At2g31440 PE=2 SV=2)

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-90
Identity = 172/248 (69.35%), Postives = 204/248 (82.26%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGY L+ALGPSLSLF+SVI+ KPFLILT+LSST                     
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
                  A L++TSV FQE LR LFWKVY++LED+LD+FADR+S+PRL+LTDK+QIALAG
Sbjct: 61  XXXXXXXALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++V+RCS++PFFL+SAIIALAFVTIHTFSMVIAF 
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GY++G KVDQ  VPVIHL AGM+TLVNFAS GCVIG+PLLY++ASLTL+H GKMVW+RL+
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240

Query: 241 ESRSSQGS 249
           ESR+   +
Sbjct: 241 ESRNQSSA 248

[Close]

BLAST of Carg22607 vs. Swiss-Prot
Match: sp|Q9VQG2|APH1_DROME (Gamma-secretase subunit Aph-1 OS=Drosophila melanogaster OX=7227 GN=aph-1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.0e-19
Identity = 71/208 (34.13%), Postives = 110/208 (52.88%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MT+    G T IA GP  +LF+  IA+ P  I+ L+++   WL+SL L+S+LW   +PL 
Sbjct: 1   MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSL-LISSLWYALIPLK 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQI-ALA 120
             +    A  ++ SV FQEA R + +++ R  E  L A A+        +TD   I A  
Sbjct: 61  EFL----AFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 120

Query: 121 GGLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAF 180
            GLG G+   +F  +++L    GP T  +   ++L FF+ SA  AL+ + +HTF  VI F
Sbjct: 121 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 180

Query: 181 NGYSEGKKVDQYFVPVIHLAAGMVTLVN 208
           N +     +   +V   HL   ++TL+N
Sbjct: 181 NAFDTNNYIHIGYVVFSHLFVSLITLLN 197

[Close]

BLAST of Carg22607 vs. Swiss-Prot
Match: sp|Q8JHE9|APH1B_DANRE (Gamma-secretase subunit Aph-1b OS=Danio rerio OX=7955 GN=aph1b PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-13
Identity = 69/238 (28.99%), Postives = 113/238 (47.48%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPL- 60
           MTVA   G T IA GP+++LF+  IA  P  ++ L++    WL+SL+L S +W   + + 
Sbjct: 1   MTVAVFFGCTFIAFGPAIALFMFTIARDPLRVIFLIAGAFFWLVSLLLSSLVWFITVQIS 60

Query: 61  --NSTILWPYATL--ILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQ 120
             NS        +  ++ SV+ QEA R  ++++ +K  + L A +   + P        Q
Sbjct: 61  NKNSATQQRGLLIFGVVLSVLLQEAFRYGYYRLLKKANEGLLALSQEDTMP----ISMRQ 120

Query: 121 IALAGGLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSM 180
           +A   GLG G     F  +++L+ S GP T  +   SQ  +F+ SA + LA + +H F  
Sbjct: 121 LAYVSGLGFGFMSGAFSVVNILSDSLGPGTVGIHGESQ-HYFISSAFMTLAIILLHMFWG 180

Query: 181 VIAFNGYSEGKKVDQYFVPVIHLAAGMVTLVN-FASGGCVIGIPLLYIMASLTLIHSG 233
           V+ F      +      V   HL    +T VN    G  +    +L +MA    + +G
Sbjct: 181 VVFFEACERQRWWALGAVVASHLVVSCLTFVNPHYQGSLIPTYIILSVMAVWAYLCAG 233

[Close]

BLAST of Carg22607 vs. Swiss-Prot
Match: sp|Q55FS3|APH1_DICDI (Gamma-secretase subunit Aph-1 OS=Dictyostelium discoideum OX=44689 GN=aph1 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.0e-06
Identity = 31/87 (35.63%), Postives = 43/87 (49.43%), Query Frame = 0


Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           G+G GVA+      S+L  S GP T F   C  +  F++S+II L    +H    V+AF 
Sbjct: 202 GVGSGVAYGFIMFGSILWESTGPGTLFSPACPSVNLFMLSSIITLFMTLLHVVYNVLAFQ 261

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVN 208
           GY   K     FV + H     +TL+N
Sbjct: 262 GYRSKKYHLVAFVIITHFVTTYLTLLN 288

[Close]

BLAST of Carg22607 vs. TrEMBL
Match: tr|A0A1S3BDD6|A0A1S3BDD6_CUCME (gamma-secretase subunit APH1-like OS=Cucumis melo OX=3656 GN=LOC103488662 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 2.0e-124
Identity = 236/249 (94.78%), Postives = 243/249 (97.59%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTV+AGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVSAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           ST+LWPY  LILTSVIFQE LRVLFWKVYR+LEDMLDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STVLWPYVILILTSVIFQEVLRVLFWKVYRRLEDMLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHG++HAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGISHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMA LTLIH GKMVWRRLM
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMAILTLIHCGKMVWRRLM 240

Query: 241 ESRSSQGSR 250
           E+RS QG+R
Sbjct: 241 ENRSRQGNR 249

[Close]

BLAST of Carg22607 vs. TrEMBL
Match: tr|A0A0A0KB01|A0A0A0KB01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041790 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.7e-121
Identity = 231/244 (94.67%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTV+AGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN
Sbjct: 1   MTVSAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           ST+ WPYA LILTSVIFQE LRVLFWKVYR+LEDMLDAFADRVSKPRLYL DKMQIALAG
Sbjct: 61  STVSWPYAILILTSVIFQEVLRVLFWKVYRRLEDMLDAFADRVSKPRLYLADKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHG++HAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGISHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVI IPLLYIMA LTLIH GKMVWRRLM
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVISIPLLYIMAILTLIHCGKMVWRRLM 240

Query: 241 ESRS 245
           E+RS
Sbjct: 241 ENRS 244

[Close]

BLAST of Carg22607 vs. TrEMBL
Match: tr|A0A2P4IVG8|A0A2P4IVG8_QUESU (Gamma-secretase subunit aph1-like OS=Quercus suber OX=58331 GN=CFP56_33839 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 2.3e-109
Identity = 201/248 (81.05%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MT+AAGIGY L+ALGPSLSLF+SVI+ KPFLILT+LSSTLLWLISLI+LS LWRGFLPLN
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGLWRGFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           ST  WPY  L+ TS+ FQE LR+LFW+VY++LEDMLD FAD+VSKPRL++TDKMQI+LAG
Sbjct: 61  STTWWPYGLLLFTSIAFQEGLRLLFWRVYKRLEDMLDTFADKVSKPRLFMTDKMQISLAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT+FVDRCSQ+PFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GY+EG KVDQ FVPV+HLAAG+VTLVNFASGGC++ IPLLY +A LTLIH GKMVWRRL 
Sbjct: 181 GYAEGNKVDQLFVPVVHLAAGLVTLVNFASGGCIVSIPLLYFIAILTLIHCGKMVWRRLK 240

Query: 241 ESRSSQGS 249
           E +S+QG+
Sbjct: 241 EHQSTQGN 248

[Close]

BLAST of Carg22607 vs. TrEMBL
Match: tr|A0A2I4DH01|A0A2I4DH01_9ROSI (gamma-secretase subunit APH1-like OS=Juglans regia OX=51240 GN=LOC108980061 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 8.9e-109
Identity = 205/248 (82.66%), Postives = 226/248 (91.13%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGY L+ALGPSLSLF+SVI+ KPFLILT+LSSTLLWL SLI+LS +WR FLPL 
Sbjct: 1   MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTVLSSTLLWLTSLIVLSGVWRVFLPLK 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           ST  WPY  LI TS+ FQE LRVLFWKVY++LED+LD FAD+VSKPRL+ TDKMQIALAG
Sbjct: 61  STSWWPYGLLIFTSIAFQEGLRVLFWKVYKRLEDLLDNFADKVSKPRLFQTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT+FVDRCSQ+PFFLVSAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GY+EG KVDQ FVPV+HL AGMVTLVNFASGGC+IGIPLLY +ASLTLIH GKMVWRRL 
Sbjct: 181 GYAEGNKVDQVFVPVVHLVAGMVTLVNFASGGCIIGIPLLYFIASLTLIHCGKMVWRRLT 240

Query: 241 ESRSSQGS 249
           E+RS QG+
Sbjct: 241 ENRSRQGN 248

[Close]

BLAST of Carg22607 vs. TrEMBL
Match: tr|A0A0B0PPT5|A0A0B0PPT5_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_15904 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.0e-108
Identity = 201/248 (81.05%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
           MTVAAGIGY L+ALGPSLSLFI+VI+ KPFLILTLLSSTL+WLISLI+LS +WR FLPLN
Sbjct: 1   MTVAAGIGYALVALGPSLSLFIAVISKKPFLILTLLSSTLVWLISLIILSGIWRAFLPLN 60

Query: 61  STILWPYATLILTSVIFQEALRVLFWKVYRKLEDMLDAFADRVSKPRLYLTDKMQIALAG 120
           ST  WP+A LI TS+ FQE LR+LFWKVY++LED+LDAFADRVSKPRLYLTDKMQIALAG
Sbjct: 61  STTWWPFAILIFTSIAFQEGLRLLFWKVYKRLEDILDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPATYFVDRCSQ+PFFLVSAIIALAFVT+HTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATYFVDRCSQIPFFLVSAIIALAFVTVHTFSMVIAFN 180

Query: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVIGIPLLYIMASLTLIHSGKMVWRRLM 240
           GY+EG KVDQ FVP +HLAAGM+TL+NFA GGCVIGIPLL++MA+LT++H G+MVWRRL 
Sbjct: 181 GYAEGNKVDQLFVPSVHLAAGMMTLINFAYGGCVIGIPLLFLMATLTVMHCGRMVWRRLS 240

Query: 241 ESRSSQGS 249
           E+++   S
Sbjct: 241 ENQTQVNS 248

The following BLAST results are available for this feature:

BLAST of Carg22607 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549211.1	2.0e-128	99.20	gamma-secretase subunit APH1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022929902.1	2.6e-128	98.80	gamma-secretase subunit APH1-like [Cucurbita moschata]	[more]
XP_022992373.1	1.7e-127	98.80	gamma-secretase subunit APH1-like [Cucurbita maxima]	[more]
XP_008445715.1	3.0e-124	94.78	PREDICTED: gamma-secretase subunit APH1-like [Cucumis melo]	[more]
XP_022150431.1	1.9e-123	94.38	gamma-secretase subunit APH1-like isoform X1 [Momordica charantia]	[more]

BLAST of Carg22607 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31440.1	1.1e-91	69.35	INVOLVED IN: positive regulation of catalytic activity, protein processing	[more]

BLAST of Carg22607 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L9G7\|APH1_ARATH	1.9e-90	69.35	Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana OX=3702 GN=At2g31440 P...	[more]
sp\|Q9VQG2\|APH1_DROME	3.0e-19	34.13	Gamma-secretase subunit Aph-1 OS=Drosophila melanogaster OX=7227 GN=aph-1 PE=1 S...	[more]
sp\|Q8JHE9\|APH1B_DANRE	3.2e-13	28.99	Gamma-secretase subunit Aph-1b OS=Danio rerio OX=7955 GN=aph1b PE=2 SV=1	[more]
sp\|Q55FS3\|APH1_DICDI	5.0e-06	35.63	Gamma-secretase subunit Aph-1 OS=Dictyostelium discoideum OX=44689 GN=aph1 PE=3 ...	[more]

BLAST of Carg22607 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDD6\|A0A1S3BDD6_CUCME	2.0e-124	94.78	gamma-secretase subunit APH1-like OS=Cucumis melo OX=3656 GN=LOC103488662 PE=4 S...	[more]
tr\|A0A0A0KB01\|A0A0A0KB01_CUCSA	2.7e-121	94.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041790 PE=4 SV=1	[more]
tr\|A0A2P4IVG8\|A0A2P4IVG8_QUESU	2.3e-109	81.05	Gamma-secretase subunit aph1-like OS=Quercus suber OX=58331 GN=CFP56_33839 PE=4 ...	[more]
tr\|A0A2I4DH01\|A0A2I4DH01_9ROSI	8.9e-109	82.66	gamma-secretase subunit APH1-like OS=Juglans regia OX=51240 GN=LOC108980061 PE=4...	[more]
tr\|A0A0B0PPT5\|A0A0B0PPT5_GOSAR	2.0e-108	81.05	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_15904 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016485	protein processing
GO:0043085	positive regulation of catalytic activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR009294	Aph-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0016485	protein processing
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22607-RA	Carg22607-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009294	Gamma-secretase subunit Aph-1	PFAM	PF06105	Aph-1	coord: 2..237 e-value: 2.4E-62 score: 210.2
IPR009294	Gamma-secretase subunit Aph-1	PANTHER	PTHR12889	GAMMA-SECRETASE SUBUNIT APH-1	coord: 1..247
None	No IPR available	PANTHER	PTHR12889:SF0	GAMMA-SECRETASE SUBUNIT APH-1	coord: 1..247

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22607	Csa6G041790	Cucumber (Chinese Long) v2	carcuB0248
Carg22607	MELO3C011641	Melon (DHL92) v3.5.1	carmeB0226
Carg22607	ClCG08G004470	Watermelon (Charleston Gray)	carwcgB0215
Carg22607	CSPI06G03540	Wild cucumber (PI 183967)	carcpiB0253
Carg22607	Cucsa.365050	Cucumber (Gy14) v1	carcgyB0263
Carg22607	CmaCh17G005970	Cucurbita maxima (Rimu)	carcmaB0302
Carg22607	CmoCh17G005780	Cucurbita moschata (Rifu)	carcmoB0306
Carg22607	Lsi08G003610	Bottle gourd (USVL1VR-Ls)	carlsiB197
Carg22607	Cp4.1LG12g05110	Cucurbita pepo (Zucchini)	carcpeB0310
Carg22607	CsGy6G003520	Cucumber (Gy14) v2	carcgybB0237
Carg22607	MELO3C011641.2	Melon (DHL92) v3.6.1	carmedB0233
Carg22607	CsaV3_6G003840	Cucumber (Chinese Long) v3	carcucB0252
Carg22607	Cla97C08G147600	Watermelon (97103) v2	carwmbB0224
Carg22607	Bhi04G001634	Wax gourd	carwgoB0273

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None