Carg22367 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCGCATAAAAGTTATCCAAACGCACACAGCGAATAGAAACCCCAAAATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGGTGCGCTACTTTCTCATTCTTTTAGATTCGAAAATCGAGCCAATCTGAGATTAATCTCCTCAATTTCTGTTTTCTTTTGGCAATCTGTGTAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAGCGAAAATTGAAGGTAAAGCCATTGAACTTTTTTCGTGTTCTGTACAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGAAAAAGGAAATTCTTGTTGTTTGTTTGAAAATATTGTAAGATCACTTCTGAGAAATGGAATCTGGTAATGAATGAAGTTTTAGATTATTCGTTTATCACTGAACAATGTTAAAAAAAAATCATCCACTCGTGCACATAAAATCGATCATAAAATTCTTCATTGAACATCTAATGAAACGATTGATGTCAAGGATTTTAACCAGAATTTTGAATATTGATTTGAATTCTAGGTAGGGTCGTTACTAATGGTATTAGAGCAGTATGATGTGGTTCGAAAACAAACAAAAATCACTGTTAGACGATCTAATTCCAAAGAAACGGAAGATAACACAACTAAAGGAGAGGAAGAGAATTGAG AATTTCGCATAAAAGTTATCCAAACGCACACAGCGAATAGAAACCCCAAAATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAGCGAAAATTGAAGGTAAAGCCATTGAACTTTTTTCGTGTTCTGTACAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGAAAAAGGAAATTCTTGTTGTTTGTTTGAAAATATTGTAAGATCACTTCTGAGAAATGGAATCTGGTAATGAATGAAGTTTTAGATTATTCGTTTATCACTGAACAATGTTAAAAAAAAATCATCCACTCGTGCACATAAAATCGATCATAAAATTCTTCATTGAACATCTAATGAAACGATTGATGTCAAGGATTTTAACCAGAATTTTGAATATTGATTTGAATTCTAGGTAGGGTCGTTACTAATGGTATTAGAGCAGTATGATGTGGTTCGAAAACAAACAAAAATCACTGTTAGACGATCTAATTCCAAAGAAACGGAAGATAACACAACTAAAGGAGAGGAAGAGAATTGAG ATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAG MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNRFASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALMEDDEKGASERRKKQGFGGNKR
BLAST of Carg22367 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata]) HSP 1 Score: 282.7 bits (722), Expect = 7.1e-73 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Carg22367 vs. NCBI nr
Match: XP_023525256.1 (uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.3 bits (695), Expect = 9.6e-70 Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Carg22367 vs. NCBI nr
Match: XP_022981640.1 (uncharacterized protein LOC111480699 [Cucurbita maxima]) HSP 1 Score: 269.2 bits (687), Expect = 8.1e-69 Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Carg22367 vs. NCBI nr
Match: KGN45072.1 (hypothetical protein Csa_7G420170 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 2.2e-18 Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Carg22367 vs. NCBI nr
Match: XP_002529916.2 (uncharacterized protein LOC8266243 [Ricinus communis]) HSP 1 Score: 69.7 bits (169), Expect = 9.5e-09 Identity = 56/139 (40.29%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of Carg22367 vs. TAIR10
Match: AT1G50732.1 (unknown protein.) HSP 1 Score: 44.7 bits (104), Expect = 5.9e-05 Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A0A0K9M2|A0A0A0K9M2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18 Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Carg22367 vs. TrEMBL
Match: tr|B9SV97|B9SV97_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07 Identity = 54/132 (40.91%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A1R3KBC6|A0A1R3KBC6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09684 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.4e-07 Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A067KSN4|A0A067KSN4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00909 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.5e-06 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A1U8KL37|A0A1U8KL37_GOSHI (uncharacterized protein LOC107918147 OS=Gossypium hirsutum OX=3635 GN=LOC107918147 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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