Carg22367 (gene) Silver-seed gourd

NameCarg22367
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGlutathione transport system permease gsiD
LocationCucurbita_argyrosperma_scaffold_155 : 25544 .. 26662 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTCGCATAAAAGTTATCCAAACGCACACAGCGAATAGAAACCCCAAAATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGGTGCGCTACTTTCTCATTCTTTTAGATTCGAAAATCGAGCCAATCTGAGATTAATCTCCTCAATTTCTGTTTTCTTTTGGCAATCTGTGTAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAGCGAAAATTGAAGGTAAAGCCATTGAACTTTTTTCGTGTTCTGTACAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGAAAAAGGAAATTCTTGTTGTTTGTTTGAAAATATTGTAAGATCACTTCTGAGAAATGGAATCTGGTAATGAATGAAGTTTTAGATTATTCGTTTATCACTGAACAATGTTAAAAAAAAATCATCCACTCGTGCACATAAAATCGATCATAAAATTCTTCATTGAACATCTAATGAAACGATTGATGTCAAGGATTTTAACCAGAATTTTGAATATTGATTTGAATTCTAGGTAGGGTCGTTACTAATGGTATTAGAGCAGTATGATGTGGTTCGAAAACAAACAAAAATCACTGTTAGACGATCTAATTCCAAAGAAACGGAAGATAACACAACTAAAGGAGAGGAAGAGAATTGAG

mRNA sequence

AATTTCGCATAAAAGTTATCCAAACGCACACAGCGAATAGAAACCCCAAAATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAGCGAAAATTGAAGGTAAAGCCATTGAACTTTTTTCGTGTTCTGTACAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGAAAAAGGAAATTCTTGTTGTTTGTTTGAAAATATTGTAAGATCACTTCTGAGAAATGGAATCTGGTAATGAATGAAGTTTTAGATTATTCGTTTATCACTGAACAATGTTAAAAAAAAATCATCCACTCGTGCACATAAAATCGATCATAAAATTCTTCATTGAACATCTAATGAAACGATTGATGTCAAGGATTTTAACCAGAATTTTGAATATTGATTTGAATTCTAGGTAGGGTCGTTACTAATGGTATTAGAGCAGTATGATGTGGTTCGAAAACAAACAAAAATCACTGTTAGACGATCTAATTCCAAAGAAACGGAAGATAACACAACTAAAGGAGAGGAAGAGAATTGAG

Coding sequence (CDS)

ATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAG

Protein sequence

MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNRFASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALMEDDEKGASERRKKQGFGGNKR
BLAST of Carg22367 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata])

HSP 1 Score: 282.7 bits (722), Expect = 7.1e-73
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0

Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGNKR 150
           ESEGKALMEDDEKGASERRKKQGFGGNKR
Sbjct: 121 ESEGKALMEDDEKGASERRKKQGFGGNKR 149

BLAST of Carg22367 vs. NCBI nr
Match: XP_023525256.1 (uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 9.6e-70
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0

Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQSLYLPPPVKSVF MNCITSAIELP+LRSH KPNRRQR+QNNSQSQPR+YISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFPMNCITSAIELPILRSHLKPNRRQRQQNNSQSQPRMYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVY IANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYFIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGNKR 150
           ESEGKALMED+EKGASERRKKQGFGGNKR
Sbjct: 121 ESEGKALMEDEEKGASERRKKQGFGGNKR 149

BLAST of Carg22367 vs. NCBI nr
Match: XP_022981640.1 (uncharacterized protein LOC111480699 [Cucurbita maxima])

HSP 1 Score: 269.2 bits (687), Expect = 8.1e-69
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 0

Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 10  MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 69

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 70  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 129

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGNKR 150
           ESEGKALMED+E GASERRKKQGFGGNKR
Sbjct: 130 ESEGKALMEDEEIGASERRKKQGFGGNKR 157

BLAST of Carg22367 vs. NCBI nr
Match: KGN45072.1 (hypothetical protein Csa_7G420170 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.2e-18
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQ-SNRFASLTANAI-PNSLVL 77
           MN I S+I+  +L S   PN RQ  Q+N     +IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60

Query: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 126
            NSTIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107

BLAST of Carg22367 vs. NCBI nr
Match: XP_002529916.2 (uncharacterized protein LOC8266243 [Ricinus communis])

HSP 1 Score: 69.7 bits (169), Expect = 9.5e-09
Identity = 56/139 (40.29%), Postives = 74/139 (53.24%), Query Frame = 0

Query: 11  PVKSVFSMNCITSAIEL-PVLRSHFKPN-RRQRKQNNSQSQPRIYISPQSNRFASLTANA 70
           P   +F+M CI     L P L SH K    ++ K  N  S  ++       R  S+  NA
Sbjct: 24  PEVQIFTMKCIVHFQSLFPSLHSHPKQKLMKKHKWLNPCSLVKL-----DQRVLSVRTNA 83

Query: 71  IPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDES------ 130
           +PN L+LA ST  P+Q GD+SVLL T G+LL VY IANF+VP FI KS+ +D+       
Sbjct: 84  VPNPLILAEST-SPAQGGDISVLLPTGGLLLFVYGIANFVVPFFISKSFESDKETEDSGP 143

Query: 131 EGKALMEDDEKGASERRKK 142
           E +    D+   A  R KK
Sbjct: 144 EYEGSFNDEASKAKLRTKK 156

BLAST of Carg22367 vs. TAIR10
Match: AT1G50732.1 (unknown protein.)

HSP 1 Score: 44.7 bits (104), Expect = 5.9e-05
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 0

Query: 78  STIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKS 117
           S +PPS+SGD++  L  SG ++ +YL+ NF+VP  + KS
Sbjct: 67  SVLPPSESGDITTFLFVSGAMISMYLVTNFLVPSLLFKS 105

BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A0A0K9M2|A0A0A0K9M2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQ-SNRFASLTANAI-PNSLVL 77
           MN I S+I+  +L S   PN RQ  Q+N     +IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60

Query: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 126
            NSTIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107

BLAST of Carg22367 vs. TrEMBL
Match: tr|B9SV97|B9SV97_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 54/132 (40.91%), Postives = 70/132 (53.03%), Query Frame = 0

Query: 18  MNCITSAIEL-PVLRSHFKPN-RRQRKQNNSQSQPRIYISPQSNRFASLTANAIPNSLVL 77
           M CI     L P L SH K    ++ K  N  S  ++       R  S+  NA+PN L+L
Sbjct: 1   MKCIVHFQSLFPSLHSHPKQKLMKKHKWLNPCSLVKL-----DQRVLSVRTNAVPNPLIL 60

Query: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDES------EGKALME 137
           A ST  P+Q GD+SVLL T G+LL VY IANF+VP FI KS+ +D+       E +    
Sbjct: 61  AEST-SPAQGGDISVLLPTGGLLLFVYGIANFVVPFFISKSFESDKETEDSGPEYEGSFN 120

Query: 138 DDEKGASERRKK 142
           D+   A  R KK
Sbjct: 121 DEASKAKLRTKK 126

BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A1R3KBC6|A0A1R3KBC6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09684 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.4e-07
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0

Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQ---SQPRIYISPQS-NRFASLTANAIPNSL 77
           M C+        L S  KP ++   +         PR+ +  Q+ +   SL  NAI ++ 
Sbjct: 1   MGCLHCHSSFLPLHSQLKPKQKLVAKQQLWLFCKAPRLVLQQQNVHSIVSLRTNAISHNS 60

Query: 78  VLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE 122
           +   + IPPSQSGD++V LQTS +LL+VY +ANF+ P FI K +  D+
Sbjct: 61  LFVGANIPPSQSGDITVFLQTSALLLVVYFLANFVAPYFISKYFGFDK 108

BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A067KSN4|A0A067KSN4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00909 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.5e-06
Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 66  ANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGK 125
           A A    L+L   T P + +GD+SVLLQT G+LL VY IANF+ P FI KS   D+    
Sbjct: 47  ATATTTPLILVTDTFPANSNGDISVLLQTGGLLLFVYGIANFVFPAFISKSLEFDKETED 106

Query: 126 ALMED---------DEKGASER----RKKQGFGGNK 149
           ++ ED         DEK    +    RKK+GF G +
Sbjct: 107 SVPEDDGYVDDGDADEKATMPKTKPLRKKRGFQGTR 142

BLAST of Carg22367 vs. TrEMBL
Match: tr|A0A1U8KL37|A0A1U8KL37_GOSHI (uncharacterized protein LOC107918147 OS=Gossypium hirsutum OX=3635 GN=LOC107918147 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0

Query: 38  RRQRKQNNSQSQPRIYISPQSNRFASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGV 97
           +R  +  +++S P + +     R  +   NA  N L +A + +PPSQSGD++V LQTS +
Sbjct: 26  KRHLRLFSTESSPNLVL---QTRNVNSRTNATSNPLFIA-AKVPPSQSGDITVFLQTSAL 85

Query: 98  LLIVYLIANFIVPEFIMKSYSTDE--SEGKALMEDDEKG 135
           LL+VY +ANF+ P FI K +  D+   + K    +D+KG
Sbjct: 86  LLVVYFLANFVAPYFISKYFEFDKIGEDQKRNENNDDKG 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022940449.17.1e-73100.00uncharacterized protein LOC111446047 [Cucurbita moschata][more]
XP_023525256.19.6e-7095.30uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo][more]
XP_022981640.18.1e-6997.32uncharacterized protein LOC111480699 [Cucurbita maxima][more]
KGN45072.12.2e-1859.46hypothetical protein Csa_7G420170 [Cucumis sativus][more]
XP_002529916.29.5e-0940.29uncharacterized protein LOC8266243 [Ricinus communis][more]
Match NameE-valueIdentityDescription
AT1G50732.15.9e-0546.15unknown protein.[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K9M2|A0A0A0K9M2_CUCSA1.5e-1859.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1[more]
tr|B9SV97|B9SV97_RICCO2.0e-0740.91Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1[more]
tr|A0A1R3KBC6|A0A1R3KBC6_9ROSI3.4e-0736.11Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09684 PE=4 SV=1[more]
tr|A0A067KSN4|A0A067KSN4_JATCU8.5e-0641.67Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00909 PE=4 SV=1[more]
tr|A0A1U8KL37|A0A1U8KL37_GOSHI2.5e-0537.37uncharacterized protein LOC107918147 OS=Gossypium hirsutum OX=3635 GN=LOC1079181... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22367-RACarg22367-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..149
NoneNo IPR availablePANTHERPTHR37196FAMILY NOT NAMEDcoord: 25..133