Carg22365 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22365
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	bromodomain-containing protein 9-like
Location	Cucurbita_argyrosperma_scaffold_155 : 16665 .. 18097 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGGAGACCATCGAAGGCAGATCTGGCACGGCGGTCCGGTGGAGGACTGACATCATCGGAATCTGAACCGCGACGGAGCCTCCGCAGCCGGAATGTGCGGTACAACATCGATTACGACGATTTTCTTGAAGAAGACGACGAGGATGAGGAAGAGAACGAGAGAAGAAGAGAGAAGAAGCTCAAGCTTGTTGTGAAGCTGAACCAGAGCAGAGACGGAGAGCATCTGTCGCCGGTGGCCAGACTTTCTAGGTCAGGAGCGCGTGGAGAGGACGCGGCGGAGTACGGTTCGTCGGCGTCGGAAGGGGAAGATGAACCAGAGAGGAAGCCATTGAAGAAGAGGAGGATTGGCGGAGGTGAAGAAGAGGATGAAGATGAAGATGGAGATGAAAATGAAGATGATGACATTGATGAGGTACTTGAATACAAACAAGATTGATGAACAAGAGACGCATGAGGGCAGAAAGATCACTGAGATGTTTACGCCATTGGCCCAGACTTCAAAATTAGTGTTACCTCTTTTCCATTTCTCAAGCATCCGTTTCACTCTCTCTCTCTCTCTAGGTCTTTTGAGAGGTTTTAAGGATTTTGGGGTCAACTGTCAAAAACTAACACCCCTACAGAATCTGATCACGCTCTCCCACCTTTCTCTCTCCACCACTCACTCACTCACATATCATTCTCTCTCTTTCCTTGTTGTCTGCCTTATCTGTCTCTGTTTCTGTCTCTTTCTCGACTTGTTTATCACTCGTGCTGTATTGCGAATTTATGAGTTTGTTTATATGCCCTTTTATTTGACACAATGGGTTTTGACAGGAAAGGGGAAGGAAGGTGGGCTCGAAGGGGTCCGACTCTGTTACAGGTTTGTGTTCTTTTCAATTCAATTTGTGATTCTAGTTTGCAGGTTTATTCCAATTTTGTCTTCTTTTGATCTTTGAGGTTAGTATTTGATTTGGGTTTGTTTAATTTGTGGTGTTCCTTTGATCAGGGACTCCCTCAGATCGATCATCCGGGTTGCCATTACCTGATAAGAAGACATTGGAGTTGATTCTTGACAAACTTCAGAAGTACGGGGAGGAATTGAATCTCTTTTTCTTTTTGATTTTGTTATGATGTGAAATTCCAAGTTCTTAGAATTAATATCTGAAATGATGGCAGGAAGGATACTTATGGTGTCTATGCTGAACCAGTTGATCCTGAAGAGGTCTGCAATTTCCCCCTCTTTAAGTGGTTGTTTCAAGTGTTCTTCGGCATCCAAATTTGAAATAATGTTTGTTGTTGTAGCTTCCTGACTATCACGATGTCATTGAGCATCCTATGGACTTTGCTACCGTTAGGAACAAGTTGGCTAACGGATCATATTCAACTTTGGAGCAGTTTGAGGTGGGTGTCCAATTCTTTGGTTGA

mRNA sequence

ATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGGAGACCATCGAAGGCAGATCTGGCACGGCGGTCCGGTGGAGGACTGACATCATCGGAATCTGAACCGCGACGGAGCCTCCGCAGCCGGAATGTGCGGTACAACATCGATTACGACGATTTTCTTGAAGAAGACGACGAGGATGAGGAAGAGAACGAGAGAAGAAGAGAGAAGAAGCTCAAGCTTGTTGTGAAGCTGAACCAGAGCAGAGACGGAGAGCATCTGTCGCCGGTGGCCAGACTTTCTAGGTCAGGAGCGCGTGGAGAGGACGCGGCGGAGTACGGTTCGTCGGCGTCGGAAGGGGAAGATGAACCAGAGAGGAAGCCATTGAAGAAGAGGAGGATTGGCGGAGGTGAAGAAGAGGATGAAGATGAAGATGGAGATGAAAATGAAGATGATGACATTGATGAGGAAAGGGGAAGGAAGGTGGGCTCGAAGGGGTCCGACTCTGTTACAGGGACTCCCTCAGATCGATCATCCGGGTTGCCATTACCTGATAAGAAGACATTGGAGTTGATTCTTGACAAACTTCAGAAGAAGGATACTTATGGTGTCTATGCTGAACCAGTTGATCCTGAAGAGCTTCCTGACTATCACGATGTCATTGAGCATCCTATGGACTTTGCTACCGTTAGGAACAAGTTGGCTAACGGATCATATTCAACTTTGGAGCAGTTTGAGGTGGGTGTCCAATTCTTTGGTTGA

Coding sequence (CDS)

ATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGGAGACCATCGAAGGCAGATCTGGCACGGCGGTCCGGTGGAGGACTGACATCATCGGAATCTGAACCGCGACGGAGCCTCCGCAGCCGGAATGTGCGGTACAACATCGATTACGACGATTTTCTTGAAGAAGACGACGAGGATGAGGAAGAGAACGAGAGAAGAAGAGAGAAGAAGCTCAAGCTTGTTGTGAAGCTGAACCAGAGCAGAGACGGAGAGCATCTGTCGCCGGTGGCCAGACTTTCTAGGTCAGGAGCGCGTGGAGAGGACGCGGCGGAGTACGGTTCGTCGGCGTCGGAAGGGGAAGATGAACCAGAGAGGAAGCCATTGAAGAAGAGGAGGATTGGCGGAGGTGAAGAAGAGGATGAAGATGAAGATGGAGATGAAAATGAAGATGATGACATTGATGAGGAAAGGGGAAGGAAGGTGGGCTCGAAGGGGTCCGACTCTGTTACAGGGACTCCCTCAGATCGATCATCCGGGTTGCCATTACCTGATAAGAAGACATTGGAGTTGATTCTTGACAAACTTCAGAAGAAGGATACTTATGGTGTCTATGCTGAACCAGTTGATCCTGAAGAGCTTCCTGACTATCACGATGTCATTGAGCATCCTATGGACTTTGCTACCGTTAGGAACAAGTTGGCTAACGGATCATATTCAACTTTGGAGCAGTTTGAGGTGGGTGTCCAATTCTTTGGTTGA

Protein sequence

MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEEDDEDEEENERRREKKLKLVVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSASEGEDEPERKPLKKRRIGGGEEEDEDEDGDENEDDDIDEERGRKVGSKGSDSVTGTPSDRSSGLPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFEVGVQFFG

Homology

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BLAST of Carg22365 vs. NCBI nr
Match: XP_022940779.1 (uncharacterized protein LOC111446273 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 4.3e-83
Identity = 235/237 (99.16%), Postives = 235/237 (99.16%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXXX 120
           XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDKKTL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKVGSKGSDSV GTPSDRSSGLPLPDKKTL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKVGSKGSDSVPGTPSDRSSGLPLPDKKTL 180

Query: 181 ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 238
           ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE
Sbjct: 181 ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 237

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BLAST of Carg22365 vs. NCBI nr
Match: XP_023523976.1 (uncharacterized protein LOC111788062 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 4.7e-82
Identity = 232/237 (97.89%), Postives = 233/237 (98.31%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNID+DDFLEXXXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDFDDFLEXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXXX 120
           XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSA XXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSASXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDKKTL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKVGSKGSDSV GTP DRSSGLPLPDKKTL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKVGSKGSDSVPGTPPDRSSGLPLPDKKTL 180

Query: 181 ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 238
           ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE
Sbjct: 181 ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 237

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BLAST of Carg22365 vs. NCBI nr
Match: XP_022981385.1 (uncharacterized protein LOC111480522 [Cucurbita maxima] >XP_022981386.1 uncharacterized protein LOC111480522 [Cucurbita maxima])

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXXX 120
           XXXXXXXXXXXXXVKLNQSRDGE+LSPVARLSRSGAR EDAAEYGSSAXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXVKLNQSRDGENLSPVARLSRSGARREDAAEYGSSAXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDKKTL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKVGSKGSDSV GTPSDRSSGLPLPDKKTL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKVGSKGSDSVPGTPSDRSSGLPLPDKKTL 180

Query: 181 ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 238
           ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE
Sbjct: 181 ELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 237

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BLAST of Carg22365 vs. NCBI nr
Match: XP_008465638.1 (PREDICTED: bromodomain-containing protein 9-like [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 4.4e-72
Identity = 221/252 (87.70%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLR RNVRYNIDYD    XXXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSA--------XXXX 120
           XXXXXXXXXXX  VKLNQ RDG HLSPV  +SR  AR   A EYGSSA        XXXX
Sbjct: 61  XXXXXXXXXXXLVVKLNQGRDGTHLSPVDGVSRLEARDVHAPEYGSSASEXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSV GTPSDRSSGL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVPGTPSDRSSGL 180

Query: 181 PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYST 240
           PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVI+HPMDFATVRNKL NGSYST
Sbjct: 181 PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRNKLTNGSYST 240

Query: 241 LEQFEVGVQFFG 245
           LEQF+VGV FFG
Sbjct: 241 LEQFQVGVLFFG 252

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BLAST of Carg22365 vs. NCBI nr
Match: XP_022936175.1 (uncharacterized protein LOC111442853 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 217/254 (85.43%), Postives = 222/254 (87.40%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLR RNVRYN+D+D    XXXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNVDFDXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSA------------ 120
           XXXXXXXXXXX  VKLNQ RDG HLSP++RL+RSGAR   A EYGSSA            
Sbjct: 61  XXXXXXXXXXXLVVKLNQGRDGTHLSPMSRLARSGARDAHAPEYGSSASEWEXXXXXXXX 120

Query: 121 --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPS 180
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKVGSKGSDSV GTPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKVGSKGSDSVPGTPS 180

Query: 181 DRSSGLPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLA 240
           DRSSGLPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLA
Sbjct: 181 DRSSGLPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLA 240

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BLAST of Carg22365 vs. TAIR10
Match: AT5G55040.1 (DNA-binding bromodomain-containing protein)

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28
Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 169 SSGLPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANG 228
           S   P+ DKK+LELILDKLQKKD YGVYAEPVDPEELPDYHD+IEHPMDF+TVR KLANG
Sbjct: 180 SETTPILDKKSLELILDKLQKKDIYGVYAEPVDPEELPDYHDMIEHPMDFSTVRKKLANG 239

Query: 229 SYSTLEQFEVGV 241
           SYSTLE+ E  V
Sbjct: 240 SYSTLEELESDV 251

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BLAST of Carg22365 vs. TAIR10
Match: AT1G20670.1 (DNA-binding bromodomain-containing protein)

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-27
Identity = 54/83 (65.06%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 155 SKGSDSVTGTPSDRSSGLPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEH 214
           SK +D + G+P +     PLPDKK L  ILD+LQKKDTYGVY++PVDPEELPDY ++I++
Sbjct: 155 SKATDILQGSPVESGPTTPLPDKKLLLFILDRLQKKDTYGVYSDPVDPEELPDYFEIIKN 214

Query: 215 PMDFATVRNKLANGSYSTLEQFE 238
           PMDF+T+RNKL +G+YSTLEQFE
Sbjct: 215 PMDFSTLRNKLDSGAYSTLEQFE 237

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BLAST of Carg22365 vs. TAIR10
Match: AT1G76380.2 (DNA-binding bromodomain-containing protein)

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 173 PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYST 232
           PLPDKK L  ILD++QKKDTYGVY++P DPEELPDY+++I++PMDF T+R KL +G+Y+T
Sbjct: 143 PLPDKKLLFFILDRVQKKDTYGVYSDPADPEELPDYYEIIKNPMDFTTLRKKLESGAYTT 202

Query: 233 LEQFEVGV 241
           LEQFE  V
Sbjct: 203 LEQFEQDV 210

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BLAST of Carg22365 vs. TAIR10
Match: AT1G32750.1 (HAC13 protein (HAC13))

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-07
Identity = 24/58 (41.38%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 180  LELILDKLQ-KKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQF 237
            LE I+D L+ K++   ++ +PV  +E PDY D++E+PMD +T+R+K+    Y   EQF
Sbjct: 1807 LERIVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQF 1864

[Close]

BLAST of Carg22365 vs. TAIR10
Match: AT5G14270.2 (bromodomain and extraterminal domain protein 9)

HSP 1 Score: 52.0 bits (123), Expect = 6.1e-07
Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 178 KTLELILDKLQKKDTYGVYAEPVDPEELP--DYHDVIEHPMDFATVRNKLANGSYSTLEQ 237
           K  E +L +L       V+  PVD  +L   DY +VIEHPMD  TV+NKL +G+YS   +
Sbjct: 139 KQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSE 198

Query: 238 FEVGVQ 242
           F   V+
Sbjct: 199 FAADVR 204

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BLAST of Carg22365 vs. Swiss-Prot
Match: sp|O95696|BRD1_HUMAN (Bromodomain-containing protein 1 OS=Homo sapiens OX=9606 GN=BRD1 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 180 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 238
           L  +LD+LQ KD   ++A+PV  +E+PDY D I+HPMDFAT+R +L    Y  L +FE
Sbjct: 571 LRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFE 628

[Close]

BLAST of Carg22365 vs. Swiss-Prot
Match: sp|Q9ULD4|BRPF3_HUMAN (Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens OX=9606 GN=BRPF3 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 174 LPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTL 233
           +P    L   LD LQ+KD   ++AEPV+  E+PDY + I  PMDF+T+R KL +  Y TL
Sbjct: 592 MPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTL 651

Query: 234 EQFE 238
           E+FE
Sbjct: 652 EEFE 655

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BLAST of Carg22365 vs. Swiss-Prot
Match: sp|B7ZS37|BAZ2A_XENLA (Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus laevis OX=8355 GN=baz2a PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-08
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 175  PDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLE 234
            PD    E+IL +L+  +    + EPV+P  +P Y  +I++PMDF+T+R+KL NG+YS  E
Sbjct: 1589 PDLTFCEIILMELESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLNGNYSRCE 1648

Query: 235  QF 237
            +F
Sbjct: 1649 EF 1650

[Close]

BLAST of Carg22365 vs. Swiss-Prot
Match: sp|Q7ZUF2|BRD9_DANRE (Bromodomain-containing protein 9 OS=Danio rerio OX=7955 GN=brd9 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 175 PDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLE 234
           P ++ LE  L  LQ+KD +G +A PV     P Y  +I+HPMDF+T+++K+A   Y T+ 
Sbjct: 170 PHQQLLEHFLRLLQRKDAHGFFAFPVTDAIAPGYSMIIKHPMDFSTMKDKIAANEYKTIT 229

Query: 235 QFE 238
           +F+
Sbjct: 230 EFK 232

[Close]

BLAST of Carg22365 vs. Swiss-Prot
Match: sp|Q9UUK2|GCN5_SCHPO (Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gcn5 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 173 PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYST 232
           P P    LE++  ++Q   +   + +PV  E++PDY++VIEHPMD +T+  +L N  Y +
Sbjct: 345 PKPFFAVLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYES 404

Query: 233 LEQF 237
           +E+F
Sbjct: 405 VEEF 408

[Close]

BLAST of Carg22365 vs. TrEMBL
Match: tr|A0A1S3CPQ8|A0A1S3CPQ8_CUCME (bromodomain-containing protein 9-like OS=Cucumis melo OX=3656 GN=LOC103503278 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.9e-72
Identity = 221/252 (87.70%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLR RNVRYNIDYD    XXXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSA--------XXXX 120
           XXXXXXXXXXX  VKLNQ RDG HLSPV  +SR  AR   A EYGSSA        XXXX
Sbjct: 61  XXXXXXXXXXXLVVKLNQGRDGTHLSPVDGVSRLEARDVHAPEYGSSASEXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSV GTPSDRSSGL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVPGTPSDRSSGL 180

Query: 181 PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYST 240
           PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVI+HPMDFATVRNKL NGSYST
Sbjct: 181 PLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRNKLTNGSYST 240

Query: 241 LEQFEVGVQFFG 245
           LEQF+VGV FFG
Sbjct: 241 LEQFQVGVLFFG 252

[Close]

BLAST of Carg22365 vs. TrEMBL
Match: tr|A0A0A0K3T1|A0A0A0K3T1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212100 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61
Identity = 205/243 (84.36%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 6   KRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXXXXXXX 65
           KR++  R  + +LARRSGGGLTSSESEPRRSLR RNVRYNIDYD    XXXXXXXXXXXX
Sbjct: 17  KRERNDREIRENLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDXXXXXXXXXXXXXXXX 76

Query: 66  XXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSA--------XXXXXXXXX 125
           XXXXXXX VKLNQ RDG HLSPV  +SR  AR   A EYGSSA        XXXXXXXXX
Sbjct: 77  XXXXXXXVVKLNQGRDGTHLSPVDGVSRLEARDLHAPEYGSSASEXXXXXXXXXXXXXXX 136

Query: 126 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDK 185
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSV GTPSDRSSGLPLPDK
Sbjct: 137 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVPGTPSDRSSGLPLPDK 196

Query: 186 KTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 241
           KTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVI+HPMDFATVRNKLANGSYSTLEQFE
Sbjct: 197 KTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRNKLANGSYSTLEQFE 256

[Close]

BLAST of Carg22365 vs. TrEMBL
Match: tr|A0A2I4EYI3|A0A2I4EYI3_9ROSI (uncharacterized protein LOC108993865 isoform X1 OS=Juglans regia OX=51240 GN=LOC108993865 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 167/238 (70.17%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLE-XXXXXX 60
           MGQIVKRKKKGRPSKADLARR+     + E + RRSLR RNVRYNIDYDD+L+ XXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRAVESAAAPEPDIRRSLRRRNVRYNIDYDDYLDXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXX 120
           XXXXXXXXXXXXX VKLNQ    E  S    ++R     ED  E                
Sbjct: 61  XXXXXXXXXXXXXVVKLNQG--SESPSRAHTVARDSHASEDECE-----------RKPLK 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDKKT 180
                  XXXXXXXXXXXXXXXXXXXXXXX RKV  K  DS  GTP+D  SG+PLPDKKT
Sbjct: 121 KRSISNGXXXXXXXXXXXXXXXXXXXXXXXGRKVDLKELDSAPGTPTDPRSGVPLPDKKT 180

Query: 181 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 238
           LELILDKLQKKDTYGVYAEPVDPEELPDYHDVI+HPMDFATVR KLANGSYSTLEQFE
Sbjct: 181 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRKKLANGSYSTLEQFE 225

[Close]

BLAST of Carg22365 vs. TrEMBL
Match: tr|A0A2I4EYI6|A0A2I4EYI6_9ROSI (uncharacterized protein LOC108993865 isoform X2 OS=Juglans regia OX=51240 GN=LOC108993865 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 167/238 (70.17%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLE-XXXXXX 60
           MGQIVKRKKKGRPSKADLARR+     + E + RRSLR RNVRYNIDYDD+L+ XXXXXX
Sbjct: 1   MGQIVKRKKKGRPSKADLARRAVESAAAPEPDIRRSLRRRNVRYNIDYDDYLDXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXVKLNQSRDGEHLSPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXX 120
           XXXXXXXXXXXXX VKLNQ    E  S    ++R     ED  E                
Sbjct: 61  XXXXXXXXXXXXXVVKLNQG--SESPSRAHTVARDSHASEDECE-----------RKPLK 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDKKT 180
                  XXXXXXXXXXXXXXXXXXXXXXX RKV  K  DS  GTP+D  SG+PLPDKKT
Sbjct: 121 KRSISNGXXXXXXXXXXXXXXXXXXXXXXXGRKVDLKELDSAPGTPTDPRSGVPLPDKKT 180

Query: 181 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFE 238
           LELILDKLQKKDTYGVYAEPVDPEELPDYHDVI+HPMDFATVR KLANGSYSTLEQFE
Sbjct: 181 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRKKLANGSYSTLEQFE 225

[Close]

BLAST of Carg22365 vs. TrEMBL
Match: tr|A5BEU9|A5BEU9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007685 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-45
Identity = 155/241 (64.32%), Postives = 167/241 (69.29%), Query Frame = 0


Query: 1   MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEXXXXXXX 60
           M QIVKRKKKGRPSK+DLARRS       E + RRS R R+VRYNIDYDDF+ XXXXXXX
Sbjct: 1   MVQIVKRKKKGRPSKSDLARRSTAEGAQPERDLRRSHRRRSVRYNIDYDDFVXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXVKLNQSRDGEHL-SPVARLSRSGARGEDAAEYGSSAXXXXXXXXXXX 120
           XXXXXXXXXXXXX        GE   S   R          ++EYG+         XXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXAGESAPSGTRRDENESGVSASSSEYGNKPLKKRRIDXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVGSKGSDSVTGTPSDRSSGLPLPDKKT 180
           XXXXXXXXXXXXXXX                RK  SKG DSV GTP++ SSG+PLPDKK+
Sbjct: 121 XXXXXXXXXXXXXXXVNDCTDLEAGKCEERGRKADSKGMDSVLGTPAEVSSGIPLPDKKS 180

Query: 181 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFEVG 240
           LELILDKLQKKD YGVYAEPVDPEELPDYHDVIEHPMDFATVR KL NGSY T E+FE  
Sbjct: 181 LELILDKLQKKDIYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLGNGSYRTFEEFESD 240

The following BLAST results are available for this feature:

BLAST of Carg22365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940779.1	4.3e-83	99.16	uncharacterized protein LOC111446273 [Cucurbita moschata]	[more]
XP_023523976.1	4.7e-82	97.89	uncharacterized protein LOC111788062 [Cucurbita pepo subsp. pepo]	[more]
XP_022981385.1	2.3e-81	98.31	uncharacterized protein LOC111480522 [Cucurbita maxima] >XP_022981386.1 uncharac...	[more]
XP_008465638.1	4.4e-72	87.70	PREDICTED: bromodomain-containing protein 9-like [Cucumis melo]	[more]
XP_022936175.1	1.9e-70	85.43	uncharacterized protein LOC111442853 [Cucurbita moschata]	[more]

BLAST of Carg22365 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55040.1	4.8e-28	80.56	DNA-binding bromodomain-containing protein	[more]
AT1G20670.1	5.3e-27	65.06	DNA-binding bromodomain-containing protein	[more]
AT1G76380.2	3.5e-23	67.65	DNA-binding bromodomain-containing protein	[more]
AT1G32750.1	4.6e-07	41.38	HAC13 protein (HAC13)	[more]
AT5G14270.2	6.1e-07	42.42	bromodomain and extraterminal domain protein 9	[more]

BLAST of Carg22365 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O95696\|BRD1_HUMAN	1.6e-09	50.00	Bromodomain-containing protein 1 OS=Homo sapiens OX=9606 GN=BRD1 PE=1 SV=1	[more]
sp\|Q9ULD4\|BRPF3_HUMAN	1.6e-09	48.44	Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens OX=9606 GN=BRPF3...	[more]
sp\|B7ZS37\|BAZ2A_XENLA	2.4e-08	43.55	Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus laevis OX=8355 ...	[more]
sp\|Q7ZUF2\|BRD9_DANRE	9.0e-08	41.27	Bromodomain-containing protein 9 OS=Danio rerio OX=7955 GN=brd9 PE=2 SV=1	[more]
sp\|Q9UUK2\|GCN5_SCHPO	9.0e-08	37.50	Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Carg22365 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CPQ8\|A0A1S3CPQ8_CUCME	2.9e-72	87.70	bromodomain-containing protein 9-like OS=Cucumis melo OX=3656 GN=LOC103503278 PE...	[more]
tr\|A0A0A0K3T1\|A0A0A0K3T1_CUCSA	3.0e-61	84.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212100 PE=4 SV=1	[more]
tr\|A0A2I4EYI3\|A0A2I4EYI3_9ROSI	2.3e-48	70.17	uncharacterized protein LOC108993865 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4EYI6\|A0A2I4EYI6_9ROSI	2.3e-48	70.17	uncharacterized protein LOC108993865 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A5BEU9\|A5BEU9_VITVI	6.8e-45	64.32	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007685 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036427	Bromodomain-like_sf
IPR001487	Bromodomain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22365-RA	Carg22365-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001487	Bromodomain	PRINTS	PR00503	BROMODOMAIN	coord: 221..239 score: 23.8 coord: 205..221 score: 48.34 coord: 191..204 score: 22.2
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 182..237 e-value: 1.2E-14 score: 54.1
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 188..244 score: 13.824
IPR036427	Bromodomain-like superfamily	GENE3D	G3DSA:1.20.920.10		coord: 174..242 e-value: 2.1E-21 score: 77.7
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	SSF47370	Bromodomain	coord: 158..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR22881:SF29	DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN	coord: 1..237
None	No IPR available	PANTHER	PTHR22881	BROMODOMAIN CONTAINING PROTEIN	coord: 1..237

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22365	ClCG09G010860	Watermelon (Charleston Gray)	carwcgB0860

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22365	Cucurbita pepo (Zucchini)	carcpeB1232
Carg22365	Cucurbita pepo (Zucchini)	carcpeB1233
Carg22365	Wild cucumber (PI 183967)	carcpiB0919
Carg22365	Cucumber (Chinese Long) v2	carcuB0899
Carg22365	Cucumber (Chinese Long) v3	carcucB0922
Carg22365	Bottle gourd (USVL1VR-Ls)	carlsiB802
Carg22365	Melon (DHL92) v3.5.1	carmeB0872
Carg22365	Melon (DHL92) v3.6.1	carmedB0880
Carg22365	Watermelon (97103) v1	carwmB0887
Carg22365	Watermelon (97103) v2	carwmbB0923
Carg22365	Wax gourd	carwgoB1030
Carg22365	Silver-seed gourd	carcarB638
Carg22365	Cucumber (Gy14) v2	carcgybB0870
Carg22365	Cucumber (Gy14) v1	carcgyB1003
Carg22365	Cucurbita maxima (Rimu)	carcmaB1223
Carg22365	Cucurbita maxima (Rimu)	carcmaB1224
Carg22365	Cucurbita moschata (Rifu)	carcmoB1193
Carg22365	Cucurbita moschata (Rifu)	carcmoB1194