Carg22264 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGAGGAACACTGAGCCTTAAACTGATTTCCAATCCTAAAAGTCGAAGAACAACGTTTCAGAAGAGGAAGAAAAGTCTGATGAAGAAAGCTTATGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTGTAATCGCTTCTGAGGAATTCGAAACCTGGCCTTCCGATCGTACCCAAGTTGAGGCTATGATCCGTTCTTATAAATCCCAATCTTTCTGTAAACAGTCCGCTAAGTCTTCTTATGATTTGAACCAATTCTTCTCTGATCGCAAGAACAAAATCGTAACAGAAACGTCCAAATTGCGAGAGAAAGTTCAGAAAAGTAAGGACACCAACAGTGATCACTGCCTTGATTCACTGTCGGAACATCAATTGAAGGCGTTAATGGTCACTTTAGATTCCAAAATTGGAGTCGCTGACAGTATGATTGAGTTCATGGAGGCTGATTATGATTACTTAATCGAGGGAGCCGTTGAAATTTCAAGCATTGATAAACAAACATTCAGTCCTTTGGAAACAGAGGCATCCCCGAAATTAAACATCCCAGAGTTAGGCATGGAAGCTAACTACGATTACTTGATTAGGGGAGACACTGAAATTTTAAGCGTTGATACACAAACATTAAGTCCTTTCGAAACAGAGTTATCCACTGAATTCGATGTCTCAGAAATGTTCATGGAATCTAATTACGATCCCTTGATCAAGGGAGACGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTCGAAACAGAGGCATCCCCTGAATTCGATGTCTCAGAGATGTTAATGGAGGCTAATAACGATCACCTGATCGAGGGAGCTGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTAGAAATAGAGGCATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATCCCTTGATCGAGGGAGCCGCCGAAATTGTAAGCATTGATACACAAACATTCAGTCCCTTCGAAACAGACGTATCCTCTGAATTCAATGTCTCAGAGATGTTCATGGAGGCTAATAACGATCACTTGATCGAGGTAGCCGCTGAAATTACAAACATTGATACACAAACATCGAGATCCAATCCTTTGGAAACAGAGTCATCCCCTGAATTAAACTTTTCAGAGACTTTCAGGGAGGGTATTTACGATGACATGATCGAGGAACCCACTGAAATTCCAACATTAAATGCTTTGGAAACAGAGGTATTCTCTGAATTAGACATCTCGGAATTACTGGCCGGGTCAGATGAGTTTGAATTCAATGTCGAGGGTTTTCAATCACTATTGGAGGACGAAGATCAGCAAACCCTAGCTGAGAATCATTCCTTTATCTTCCAATCTTAA ATGGGGAGAGGAACACTGAGCCTTAAACTGATTTCCAATCCTAAAAGTCGAAGAACAACGTTTCAGAAGAGGAAGAAAAGTCTGATGAAGAAAGCTTATGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTGTAATCGCTTCTGAGGAATTCGAAACCTGGCCTTCCGATCGTACCCAAGTTGAGGCTATGATCCGTTCTTATAAATCCCAATCTTTCTGTAAACAGTCCGCTAAGTCTTCTTATGATTTGAACCAATTCTTCTCTGATCGCAAGAACAAAATCGTAACAGAAACGTCCAAATTGCGAGAGAAAGTTCAGAAAAGTAAGGACACCAACAGTGATCACTGCCTTGATTCACTGTCGGAACATCAATTGAAGGCGTTAATGGTCACTTTAGATTCCAAAATTGGAGTCGCTGACAGTATGATTGAGTTCATGGAGGCTGATTATGATTACTTAATCGAGGGAGCCGTTGAAATTTCAAGCATTGATAAACAAACATTCAGTCCTTTGGAAACAGAGGCATCCCCGAAATTAAACATCCCAGAGTTAGGCATGGAAGCTAACTACGATTACTTGATTAGGGGAGACACTGAAATTTTAAGCGTTGATACACAAACATTAAGTCCTTTCGAAACAGAGTTATCCACTGAATTCGATGTCTCAGAAATGTTCATGGAATCTAATTACGATCCCTTGATCAAGGGAGACGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTCGAAACAGAGGCATCCCCTGAATTCGATGTCTCAGAGATGTTAATGGAGGCTAATAACGATCACCTGATCGAGGGAGCTGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTAGAAATAGAGGCATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATCCCTTGATCGAGGGAGCCGCCGAAATTGTAAGCATTGATACACAAACATTCAGTCCCTTCGAAACAGACGTATCCTCTGAATTCAATGTCTCAGAGATGTTCATGGAGGCTAATAACGATCACTTGATCGAGGTAGCCGCTGAAATTACAAACATTGATACACAAACATCGAGATCCAATCCTTTGGAAACAGAGTCATCCCCTGAATTAAACTTTTCAGAGACTTTCAGGGAGGGTATTTACGATGACATGATCGAGGAACCCACTGAAATTCCAACATTAAATGCTTTGGAAACAGAGGTATTCTCTGAATTAGACATCTCGGAATTACTGGCCGGGTCAGATGAGTTTGAATTCAATGTCGAGGGTTTTCAATCACTATTGGAGGACGAAGATCAGCAAACCCTAGCTGAGAATCATTCCTTTATCTTCCAATCTTAA ATGGGGAGAGGAACACTGAGCCTTAAACTGATTTCCAATCCTAAAAGTCGAAGAACAACGTTTCAGAAGAGGAAGAAAAGTCTGATGAAGAAAGCTTATGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTGTAATCGCTTCTGAGGAATTCGAAACCTGGCCTTCCGATCGTACCCAAGTTGAGGCTATGATCCGTTCTTATAAATCCCAATCTTTCTGTAAACAGTCCGCTAAGTCTTCTTATGATTTGAACCAATTCTTCTCTGATCGCAAGAACAAAATCGTAACAGAAACGTCCAAATTGCGAGAGAAAGTTCAGAAAAGTAAGGACACCAACAGTGATCACTGCCTTGATTCACTGTCGGAACATCAATTGAAGGCGTTAATGGTCACTTTAGATTCCAAAATTGGAGTCGCTGACAGTATGATTGAGTTCATGGAGGCTGATTATGATTACTTAATCGAGGGAGCCGTTGAAATTTCAAGCATTGATAAACAAACATTCAGTCCTTTGGAAACAGAGGCATCCCCGAAATTAAACATCCCAGAGTTAGGCATGGAAGCTAACTACGATTACTTGATTAGGGGAGACACTGAAATTTTAAGCGTTGATACACAAACATTAAGTCCTTTCGAAACAGAGTTATCCACTGAATTCGATGTCTCAGAAATGTTCATGGAATCTAATTACGATCCCTTGATCAAGGGAGACGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTCGAAACAGAGGCATCCCCTGAATTCGATGTCTCAGAGATGTTAATGGAGGCTAATAACGATCACCTGATCGAGGGAGCTGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTAGAAATAGAGGCATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATCCCTTGATCGAGGGAGCCGCCGAAATTGTAAGCATTGATACACAAACATTCAGTCCCTTCGAAACAGACGTATCCTCTGAATTCAATGTCTCAGAGATGTTCATGGAGGCTAATAACGATCACTTGATCGAGGTAGCCGCTGAAATTACAAACATTGATACACAAACATCGAGATCCAATCCTTTGGAAACAGAGTCATCCCCTGAATTAAACTTTTCAGAGACTTTCAGGGAGGGTATTTACGATGACATGATCGAGGAACCCACTGAAATTCCAACATTAAATGCTTTGGAAACAGAGGTATTCTCTGAATTAGACATCTCGGAATTACTGGCCGGGTCAGATGAGTTTGAATTCAATGTCGAGGGTTTTCAATCACTATTGGAGGACGAAGATCAGCAAACCCTAGCTGAGAATCATTCCTTTATCTTCCAATCTTAA MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASEEFETWPSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDHCLDSLSEHQLKALMVTLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTFSPLETEASPKLNIPELGMEANYDYLIRGDTEILSVDTQTLSPFETELSTEFDVSEMFMESNYDPLIKGDAEIVSIDTQTFSPFETEASPEFDVSEMLMEANNDHLIEGAAEIVSIDTQTFSPLEIEASTEFDVSEMFMESNYDPLIEGAAEIVSIDTQTFSPFETDVSSEFNVSEMFMEANNDHLIEVAAEITNIDTQTSRSNPLETESSPELNFSETFREGIYDDMIEEPTEIPTLNALETEVFSELDISELLAGSDEFEFNVEGFQSLLEDEDQQTLAENHSFIFQS
BLAST of Carg22264 vs. NCBI nr
Match: XP_022934582.1 (agamous-like MADS-box protein AGL6 [Cucurbita moschata]) HSP 1 Score: 347.4 bits (890), Expect = 7.2e-92 Identity = 447/459 (97.39%), Postives = 448/459 (97.60%), Query Frame = 0
BLAST of Carg22264 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89 Identity = 176/186 (94.62%), Postives = 180/186 (96.77%), Query Frame = 0
BLAST of Carg22264 vs. NCBI nr
Match: XP_004145650.1 (PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus] >KGN57712.1 hypothetical protein Csa_3G258140 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 4.3e-44 Identity = 113/191 (59.16%), Postives = 133/191 (69.63%), Query Frame = 0
BLAST of Carg22264 vs. NCBI nr
Match: XP_023528957.1 (agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 144.8 bits (364), Expect = 7.1e-31 Identity = 96/206 (46.60%), Postives = 122/206 (59.22%), Query Frame = 0
BLAST of Carg22264 vs. NCBI nr
Match: XP_022935361.1 (agamous-like MADS-box protein AGL14 [Cucurbita moschata]) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-30 Identity = 95/206 (46.12%), Postives = 122/206 (59.22%), Query Frame = 0
BLAST of Carg22264 vs. TAIR10
Match: AT5G58890.1 (AGAMOUS-like 82) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-13 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of Carg22264 vs. TAIR10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-10 Identity = 40/130 (30.77%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Carg22264 vs. TAIR10
Match: AT2G45650.1 (AGAMOUS-like 6) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-09 Identity = 51/180 (28.33%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of Carg22264 vs. TAIR10
Match: AT4G18960.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 59.7 bits (143), Expect = 5.5e-09 Identity = 44/165 (26.67%), Postives = 82/165 (49.70%), Query Frame = 0
BLAST of Carg22264 vs. TAIR10
Match: AT5G55690.1 (MADS-box transcription factor family protein) HSP 1 Score: 59.7 bits (143), Expect = 5.5e-09 Identity = 46/147 (31.29%), Postives = 72/147 (48.98%), Query Frame = 0
BLAST of Carg22264 vs. Swiss-Prot
Match: sp|Q9FIM0|AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.3e-12 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of Carg22264 vs. Swiss-Prot
Match: sp|Q2QW53|MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS13 PE=1 SV=2) HSP 1 Score: 68.2 bits (165), Expect = 2.8e-10 Identity = 52/173 (30.06%), Postives = 90/173 (52.02%), Query Frame = 0
BLAST of Carg22264 vs. Swiss-Prot
Match: sp|Q40885|AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-09 Identity = 53/189 (28.04%), Postives = 95/189 (50.26%), Query Frame = 0
BLAST of Carg22264 vs. Swiss-Prot
Match: sp|Q38836|AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.1e-09 Identity = 40/130 (30.77%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Carg22264 vs. Swiss-Prot
Match: sp|Q40872|AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.1e-09 Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 0
BLAST of Carg22264 vs. TrEMBL
Match: tr|A0A0A0LAL9|A0A0A0LAL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.9e-44 Identity = 113/191 (59.16%), Postives = 133/191 (69.63%), Query Frame = 0
BLAST of Carg22264 vs. TrEMBL
Match: tr|A0A0A0LME6|A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27 Identity = 81/173 (46.82%), Postives = 108/173 (62.43%), Query Frame = 0
BLAST of Carg22264 vs. TrEMBL
Match: tr|A0A1S3CDG6|A0A1S3CDG6_CUCME (MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26 Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 0
BLAST of Carg22264 vs. TrEMBL
Match: tr|M5X3X5|M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G110900 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.1e-22 Identity = 62/145 (42.76%), Postives = 95/145 (65.52%), Query Frame = 0
BLAST of Carg22264 vs. TrEMBL
Match: tr|A0A2I4EBE1|A0A2I4EBE1_9ROSI (agamous-like MADS-box protein AGL80 OS=Juglans regia OX=51240 GN=LOC108988069 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-22 Identity = 67/162 (41.36%), Postives = 98/162 (60.49%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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