Carg22099 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22099
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Remorin like
Location	Cucurbita_argyrosperma_scaffold_229 : 91950 .. 92932 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACGATGAGCCCAAGAAGATGGAATCTAAACCTCCGTCCGAGCCCTCTCCGCCGCAAGCGGCGGAGCTGGTGGAGGAGCCGACTAAAAACGTGGCGGAGGAGAAATCAATCATCCAGTTAACCCCGCCGGAGAAGATGCCGGCTGACGACTCCAAACCTCTGCTTATCATTGAAAGTAATTTACAGACATAAAGCTCTTAACTTTTTCATTTGTTTTCATTCTTTTTTGCTTTTTGGAGCTGTTTGGTTGATGGGAAAAAAAATTAAAAGGAAAAAAGAATAAAAAAAGGGATTGAACTTTGGAATTCATCTTGCTCTGTTTTGACAGAGACTGAAGCAAAAATAGAGGAGAAACAGAGTAGCTCAATTAATAGAGGTAATTAACTAGCCATATGAAGTGATTAATGTCAATAATTTAATACCCAAATGAAAAATTGAATAAATTTCTTTGTTTTTATGGCTCTTAGATGCTGAGCTTGCAAGAGTAGCAACAGAGAAGAGACACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAGAACAGAGAACAGGTACCCATAATTTTGGTTGTTGAGTATTAAAGAGATCTAAGGTAGATAGCTAATGGAGTTCATTGAGCAGAGCTCACAAAAAGCTATCAGAAATTGGGTCATGGGAGAGCAGCAAGAAAGCGGCGGTGGAGGCTGAGCTAAAACAGATTGAGGTAAGCAATATGAACATGGAATCTGTTTGGATGCCGAGAAAATTTTGGTGTGAAAATATATGTTTGTGTTTGAGAACAGGAAAAGTTTGAGAAGAAGAAAGCGGAATATGTTGAGAAAATGAAGAACAAAATAGCATTGATTCATAAAGCAGCAGAAGAGAAGAAGGCAGTGATTGAAGCGAAACGTGGAGAAGAGAAGCTTAAAGCAGAGGAAATTGCTGCAAAATACAGAGCCACTGGAACTGCTCCAAAGAAGATTCTTGGTTGTTTCTAA

mRNA sequence

ATGGCTGACGATGAGCCCAAGAAGATGGAATCTAAACCTCCGTCCGAGCCCTCTCCGCCGCAAGCGGCGGAGCTGGTGGAGGAGCCGACTAAAAACGTGGCGGAGGAGAAATCAATCATCCAGTTAACCCCGCCGGAGAAGATGCCGGCTGACGACTCCAAACCTCTGCTTATCATTGAAAAGACTGAAGCAAAAATAGAGGAGAAACAGAGTAGCTCAATTAATAGAGATGCTGAGCTTGCAAGAGTAGCAACAGAGAAGAGACACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAGAACAGAGAACAGCTCACAAAAAGCTATCAGAAATTGGGTCATGGGAGAGCAGCAAGAAAGCGGCGGTGGAGGCTGAGCTAAAACAGATTGAGGAAAAGTTTGAGAAGAAGAAAGCGGAATATGTTGAGAAAATGAAGAACAAAATAGCATTGATTCATAAAGCAGCAGAAGAGAAGAAGGCAGTGATTGAAGCGAAACGTGGAGAAGAGAAGCTTAAAGCAGAGGAAATTGCTGCAAAATACAGAGCCACTGGAACTGCTCCAAAGAAGATTCTTGGTTGTTTCTAA

Coding sequence (CDS)

ATGGCTGACGATGAGCCCAAGAAGATGGAATCTAAACCTCCGTCCGAGCCCTCTCCGCCGCAAGCGGCGGAGCTGGTGGAGGAGCCGACTAAAAACGTGGCGGAGGAGAAATCAATCATCCAGTTAACCCCGCCGGAGAAGATGCCGGCTGACGACTCCAAACCTCTGCTTATCATTGAAAAGACTGAAGCAAAAATAGAGGAGAAACAGAGTAGCTCAATTAATAGAGATGCTGAGCTTGCAAGAGTAGCAACAGAGAAGAGACACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAGAACAGAGAACAGCTCACAAAAAGCTATCAGAAATTGGGTCATGGGAGAGCAGCAAGAAAGCGGCGGTGGAGGCTGAGCTAAAACAGATTGAGGAAAAGTTTGAGAAGAAGAAAGCGGAATATGTTGAGAAAATGAAGAACAAAATAGCATTGATTCATAAAGCAGCAGAAGAGAAGAAGGCAGTGATTGAAGCGAAACGTGGAGAAGAGAAGCTTAAAGCAGAGGAAATTGCTGCAAAATACAGAGCCACTGGAACTGCTCCAAAGAAGATTCTTGGTTGTTTCTAA

Protein sequence

MADDEPKKMESKPPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEKMPADDSKPLLIIEKTEAKIEEKQSSSINRDAELARVATEKRHSLKLGKRVKNQEQRTAHKKLSEIGSWESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPKKILGCF

Homology

[Close]

BLAST of Carg22099 vs. NCBI nr
Match: XP_022968544.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 157.1 bits (396), Expect = 5.9e-35
Identity = 112/197 (56.85%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 1   MADDEPKKMESKPPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEKMPADDSKPLLIIE 60
           MADDEPKK+ES+PPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEK PADDSKPLLI E
Sbjct: 1   MADDEPKKLESEPPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEKTPADDSKPLLIFE 60

Query: 61  KTEAKIEEKQSSSINRDAELARVATEKRHSL--KLGKRVKNQEQRTAHKKLSEIGSWESS 120
           KTEAK EEKQSSSINRDAELARVATEKR +L     +  K++ +  A             
Sbjct: 61  KTEAKTEEKQSSSINRDAELARVATEKRLTLIKAWEESEKSRTENRAXXXXXXXXXXXXX 120

Query: 121 KKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAEEIA 180
                                                              EKLKAEEIA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLKAEEIA 180

Query: 181 AKYRATGTAPKKILGCF 196
           AKYRATGTAPKKILGCF
Sbjct: 181 AKYRATGTAPKKILGCF 197

[Close]

BLAST of Carg22099 vs. NCBI nr
Match: XP_022944819.1 (remorin [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33
Identity = 109/197 (55.33%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 1   MADDEPKKMESKPPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEKMPADDSKPLLIIE 60
           MADDEPK+++S+PPSE SPPQ AELVEEPTKNVAEEKSIIQLTPPEK PADDSKPLLIIE
Sbjct: 1   MADDEPKRLDSEPPSESSPPQVAELVEEPTKNVAEEKSIIQLTPPEKTPADDSKPLLIIE 60

Query: 61  KTEAKIEEKQSSSINRDAELARVATEKRHSL--KLGKRVKNQEQRTAHKKLSEIGSWESS 120
           KTEAK EEKQSSSINRDAELARVATEKR +L     +  K++ +  A             
Sbjct: 61  KTEAKTEEKQSSSINRDAELARVATEKRLTLIKAWEESEKSRTENRAXXXXXXXXXXXXX 120

Query: 121 KKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAEEIA 180
                                                              EKLKAEEIA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLKAEEIA 180

Query: 181 AKYRATGTAPKKILGCF 196
           AKYRATGTAPKKILGCF
Sbjct: 181 AKYRATGTAPKKILGCF 197

[Close]

BLAST of Carg22099 vs. NCBI nr
Match: PPS03461.1 (hypothetical protein GOBAR_AA17213 [Gossypium barbadense])

HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30
Identity = 90/146 (61.64%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 72  SSINRDAELARVATEKRHSL----KLGKRVKNQEQRTAH------------------KKL 131
           S+++RDA LARVATEKR SL    +  +R K + +                      KKL
Sbjct: 62  STVDRDAVLARVATEKRISLIKAWEESERSKAENKYELFFTLFFFSLKSLRKLGELIKKL 121

Query: 132 SEIGSWESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGE 191
           S I +WE+SKKAA+EAELK+IEEK EK+KAEYVEKMKNKIALIHK AEEKKA++EAKRGE
Sbjct: 122 SSIEAWENSKKAALEAELKKIEEKLEKQKAEYVEKMKNKIALIHKEAEEKKAMVEAKRGE 181

Query: 192 EKLKAEEIAAKYRATGTAPKKILGCF 196
           + LKAEEIAAKYRATGT P K+LGCF
Sbjct: 182 DLLKAEEIAAKYRATGTTPNKVLGCF 207

[Close]

BLAST of Carg22099 vs. NCBI nr
Match: KCW46422.1 (hypothetical protein EUGRSUZ_K00253 [Eucalyptus grandis])

HSP 1 Score: 135.2 bits (339), Expect = 2.4e-28
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 50  ADDSKPLLIIEK-TEAKIEEKQSSSINRDAELARVATEKRHSL----------------- 109
           ADD+K L ++EK  E  + + +  S NRD ELARV T+K+ SL                 
Sbjct: 51  ADDTKALAVVEKPIETPVVKSKDGSGNRDVELARVETDKKLSLIRAWEENEKSKAENNTF 110

Query: 110 ----KLGKRVKNQEQRTAHKKLSEIGSWESSKKAAVEAELKQIEEKFEKKKAEYVEKMKN 169
               KL  +V  +    A KK S IG+WE+SKKA++ ++LK  EEK EKKKAEY E MKN
Sbjct: 111 ERGRKLHAKVPRRSLNRAQKKFSTIGAWENSKKASIGSDLKNFEEKMEKKKAEYAETMKN 170

Query: 170 KIALIHKAAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPKKILGCF 196
           KIA +HK AEEK+A++EAK+GE+ LKAEE+AAKYRA+G  PKK+L CF
Sbjct: 171 KIASVHKLAEEKRAIVEAKKGEDLLKAEEMAAKYRASGLVPKKLLLCF 218

[Close]

BLAST of Carg22099 vs. NCBI nr
Match: XP_010035130.1 (PREDICTED: remorin isoform X2 [Eucalyptus grandis])

HSP 1 Score: 134.8 bits (338), Expect = 3.1e-28
Identity = 85/169 (50.30%), Postives = 110/169 (65.09%), Query Frame = 0


Query: 50  ADDSKPLLIIEK-TEAKIEEKQSSSINRDAELARVATEKRHSL----------------- 109
           ADD+K L ++EK  E  + + +  S NRD ELARV T+K+ SL                 
Sbjct: 51  ADDTKALAVVEKPIETPVVKSKDGSGNRDVELARVETDKKLSLIRAWEENEKSKAENNST 110

Query: 110 -----KLGKRVKNQEQRTAHKKLSEIGSWESSKKAAVEAELKQIEEKFEKKKAEYVEKMK 169
                KL  +V  +    A KK S IG+WE+SKKA++ ++LK  EEK EKKKAEY E MK
Sbjct: 111 FERGRKLHAKVPRRSLNRAQKKFSTIGAWENSKKASIGSDLKNFEEKMEKKKAEYAETMK 170

Query: 170 NKIALIHKAAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPKKILGCF 196
           NKIA +HK AEEK+A++EAK+GE+ LKAEE+AAKYRA+G  PKK+L CF
Sbjct: 171 NKIASVHKLAEEKRAIVEAKKGEDLLKAEEMAAKYRASGLVPKKLLLCF 219

[Close]

BLAST of Carg22099 vs. TAIR10
Match: AT3G48940.1 (Remorin family protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 164 EAKRGEEKLKAEEIAAKYRATGTAPKKILGCF 196
           EAKRGE+ LKAEE+AAKYRATGTAP K+ G F
Sbjct: 144 EAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of Carg22099 vs. TrEMBL
Match: tr|A0A2N9GSE5|A0A2N9GSE5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30474 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 105/201 (52.24%), Postives = 130/201 (64.68%), Query Frame = 0


Query: 1   MADDEPKKMESKPPSEPSPPQAAELVEEPTKNVAEEKSII-QLTPPEKMPADDSKPLLII 60
           MA++EPKK+E++ PSEP PP A E V+ P K+V EEKS+I   TPP +    +SK L I+
Sbjct: 1   MANEEPKKVETETPSEP-PPPAPEYVQGPPKDVTEEKSVIPPSTPPAEEKPVESKALAIV 60

Query: 61  EKT-EAKIEEKQSSSINRDAELARVATEKRHSLKLGKRVKNQEQRTAHKK----LSEIGS 120
           EK  E + E+    S+NRDA L RV T+KR  + L K  +  E+  A  K          
Sbjct: 61  EKAPEYEAEKSTEGSVNRDAVLERVETQKR--ISLIKAWEESEKSKAENKXXXXXXXXXX 120

Query: 121 WESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKA 180
                       LKQIEE+ EKKKA+YV    NK+ALIHKAAEEK+A+IEAKRGE+ LKA
Sbjct: 121 XXXXXXXXXXXXLKQIEEQLEKKKAQYVXXXXNKVALIHKAAEEKRALIEAKRGEDLLKA 180

Query: 181 EEIAAKYRATGTAPKKILGCF 196
           EE AAKYRATGTAPKK+L CF
Sbjct: 181 EETAAKYRATGTAPKKLLTCF 198

[Close]

BLAST of Carg22099 vs. TrEMBL
Match: tr|A0A2P5XJF2|A0A2P5XJF2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17213 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.9e-30
Identity = 90/146 (61.64%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 72  SSINRDAELARVATEKRHSL----KLGKRVKNQEQRTAH------------------KKL 131
           S+++RDA LARVATEKR SL    +  +R K + +                      KKL
Sbjct: 62  STVDRDAVLARVATEKRISLIKAWEESERSKAENKYELFFTLFFFSLKSLRKLGELIKKL 121

Query: 132 SEIGSWESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGE 191
           S I +WE+SKKAA+EAELK+IEEK EK+KAEYVEKMKNKIALIHK AEEKKA++EAKRGE
Sbjct: 122 SSIEAWENSKKAALEAELKKIEEKLEKQKAEYVEKMKNKIALIHKEAEEKKAMVEAKRGE 181

Query: 192 EKLKAEEIAAKYRATGTAPKKILGCF 196
           + LKAEEIAAKYRATGT P K+LGCF
Sbjct: 182 DLLKAEEIAAKYRATGTTPNKVLGCF 207

[Close]

BLAST of Carg22099 vs. TrEMBL
Match: tr|A0A058ZXC0|A0A058ZXC0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00253 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 50  ADDSKPLLIIEK-TEAKIEEKQSSSINRDAELARVATEKRHSL----------------- 109
           ADD+K L ++EK  E  + + +  S NRD ELARV T+K+ SL                 
Sbjct: 51  ADDTKALAVVEKPIETPVVKSKDGSGNRDVELARVETDKKLSLIRAWEENEKSKAENNTF 110

Query: 110 ----KLGKRVKNQEQRTAHKKLSEIGSWESSKKAAVEAELKQIEEKFEKKKAEYVEKMKN 169
               KL  +V  +    A KK S IG+WE+SKKA++ ++LK  EEK EKKKAEY E MKN
Sbjct: 111 ERGRKLHAKVPRRSLNRAQKKFSTIGAWENSKKASIGSDLKNFEEKMEKKKAEYAETMKN 170

Query: 170 KIALIHKAAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPKKILGCF 196
           KIA +HK AEEK+A++EAK+GE+ LKAEE+AAKYRA+G  PKK+L CF
Sbjct: 171 KIASVHKLAEEKRAIVEAKKGEDLLKAEEMAAKYRASGLVPKKLLLCF 218

[Close]

BLAST of Carg22099 vs. TrEMBL
Match: tr|A0A067JEJ1|A0A067JEJ1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26117 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.6e-28
Identity = 100/191 (52.36%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 28  EPTKNVAEEKSIIQLTPPEKMPADDSKPLLIIEKTEAKIEEKQS-SSINRDAELARVATE 87
           EP K+VAEEKSII            SK L+ +EKT    E K S  S+NRDA LARV T+
Sbjct: 35  EPPKDVAEEKSII--XXXXXXXXXXSKELVPVEKTPEPAETKSSEGSVNRDAVLARVETQ 94

Query: 88  KRHSLKLGKRVKNQEQRTAHKKLSEIGSWESSKKAAVE---------------------- 147
           KR                    LS I +WE S+K+  E                      
Sbjct: 95  KR--------------------LSLIRAWEESEKSKAEXXXXXXXXXXXXXXXXXXXXXX 154

Query: 148 AELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAEEIAAKYRAT 196
            ELKQIEEK EK+KAEY EKMKNKIALIHKAAEEK+A+IEAKRGE+ LKAEE AAK RAT
Sbjct: 155 XELKQIEEKLEKQKAEYAEKMKNKIALIHKAAEEKRAIIEAKRGEDLLKAEETAAKCRAT 203

[Close]

BLAST of Carg22099 vs. TrEMBL
Match: tr|I3T094|I3T094_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 94/175 (53.71%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 27  EEPTKNVAEEKSII-QLTPPEKMPADDSKPLLIIEKTEAKIEEKQ-SSSINRDAELARVA 86
           + P ++VAEEKSII Q +PPE  P DDSK ++ +EKT+   EEK    SINRDA L RVA
Sbjct: 43  DAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKVEKTQEAAEEKPLEGSINRDAVLTRVA 102

Query: 87  TEKRHSLKLGKRVKNQEQRTAHKK----LSEIGSWESSKKAAVEAELKQIEEKFEKKKAE 146
           TEKR  L L K  +  E+  A  K                     EL++IEE  EKKKA 
Sbjct: 103 TEKR--LSLIKAWEESEKSIADNKAXXXXXXXXXXXXXXXXXXXXELRKIEENLEKKKAV 162

Query: 147 YVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPKKILGCF 196
           YVEK+KNKIA++H+ AEEK+A IEAK+GE+ LKAEE+AAKYRATGTAPKK    F
Sbjct: 163 YVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF 215

The following BLAST results are available for this feature:

BLAST of Carg22099 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968544.1	5.9e-35	56.85	remorin-like [Cucurbita maxima]	[more]
XP_022944819.1	2.5e-33	55.33	remorin [Cucurbita moschata]	[more]
PPS03461.1	7.5e-30	61.64	hypothetical protein GOBAR_AA17213 [Gossypium barbadense]	[more]
KCW46422.1	2.4e-28	50.60	hypothetical protein EUGRSUZ_K00253 [Eucalyptus grandis]	[more]
XP_010035130.1	3.1e-28	50.30	PREDICTED: remorin isoform X2 [Eucalyptus grandis]	[more]

BLAST of Carg22099 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48940.1	1.8e-06	78.13	Remorin family protein	[more]

BLAST of Carg22099 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22099 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9GSE5\|A0A2N9GSE5_FAGSY	1.0e-30	52.24	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30474 PE=4 SV=1	[more]
tr\|A0A2P5XJF2\|A0A2P5XJF2_GOSBA	4.9e-30	61.64	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17213 PE=4 SV...	[more]
tr\|A0A058ZXC0\|A0A058ZXC0_EUCGR	1.6e-28	50.60	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00253 PE=4 SV...	[more]
tr\|A0A067JEJ1\|A0A067JEJ1_JATCU	4.6e-28	52.36	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26117 PE=4 SV=1	[more]
tr\|I3T094\|I3T094_LOTJA	2.3e-27	53.71	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005516	Remorin_C
IPR005518	Remorin_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22099-RA	Carg22099-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..115
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN FAMILY PROTEIN-RELATED	coord: 1..195
None	No IPR available	PANTHER	PTHR31775	FAMILY NOT NAMED	coord: 1..195
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 31..83 e-value: 8.1E-15 score: 54.5
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 103..190 e-value: 6.1E-24 score: 83.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22099	Cla006181	Watermelon (97103) v1	carwmB0736
Carg22099	Csa3G182080	Cucumber (Chinese Long) v2	carcuB0754
Carg22099	MELO3C006904	Melon (DHL92) v3.5.1	carmeB0732
Carg22099	ClCG05G008030	Watermelon (Charleston Gray)	carwcgB0715
Carg22099	CSPI03G16910	Wild cucumber (PI 183967)	carcpiB0771
Carg22099	Cucsa.107770	Cucumber (Gy14) v1	carcgyB0828
Carg22099	CmaCh18G012450	Cucurbita maxima (Rimu)	carcmaB1032
Carg22099	CmoCh18G012680	Cucurbita moschata (Rifu)	carcmoB1003
Carg22099	Lsi05G012280	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22099	CsGy3G016990	Cucumber (Gy14) v2	carcgybB0733
Carg22099	MELO3C006904.2	Melon (DHL92) v3.6.1	carmedB0743
Carg22099	Cla97C05G090070	Watermelon (97103) v2	carwmbB0772
Carg22099	Cla97C05G082020	Watermelon (97103) v2	carwmbB0773
Carg22099	Bhi01G000264	Wax gourd	carwgoB0872

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22099	Carg08416	Silver-seed gourd	carcarB583

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22099	Wax gourd	carwgoB0871
Carg22099	Silver-seed gourd	carcarB594
Carg22099	Cucurbita maxima (Rimu)	carcmaB1031
Carg22099	Cucurbita moschata (Rifu)	carcmoB1002
Carg22099	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22099	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22099	Cucumber (Chinese Long) v3	carcucB0774