Carg22028 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22028
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein, putative
Location	Cucurbita_argyrosperma_scaffold_175 : 179717 .. 187543 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATGACCGAACTTAGACCCAAAATTTCTCATTGATCATAGAGTGGTGAGGGTGGGTGGTTCGTCTTTGTATCCGTCCAGCAGAAGAACTGAATTCAACTCTGGTCTTCGAATTTCACTTTCAGTAGTCCACTGAAAGGTTTGGAGATTGGAAGCCATGGAGAGAAGTGCTCGGAGGCGGATCAATTTGATTCATCGTCACCTTCTTTCGCCGCCATGTGAGTTCAACAACGCTCTTAATCCGGTTAGCGTCTCTTCACTCTTACAGTCTCTTTTCCTTCAATGTTCAAGCTGTTTTACAGAGGCGAGAGGTTCTTTTTTTCTTTTATGCGATCTTGATGATATTGTGTGTTTTAGGCGCCAACGAATAGTGGAAACCAATTGGAAATTGGTGTGGCTGAGCCTGTGATTGTTGGAGGTATGGTGCTGGATATTCACGCCATACCATCCATTTCCGCCGTTCCGAGGTCAACTACGCCCGGAAAGGTAATTTACTAATTGCTTTTTAAATATGAATTTTTTCAAAATTTGGGGAAATCATTTGTGGAGCTTGGAATAGTGTGGCTGTTTGTTGTAGAATATTATCGATATGAGAAGGAAATTACACCAGCCTATTTTGAATTTGTATATAATTTTTATTAGGGACATACAGATTTTGATGTTATCCAACTATTGTAGACCTCTTATGATATAATGCTTGAAAGTTTTTAACATTAATTGCTGGGGGATCATTAGGTTCCCCTAGAAGAAGCTGGAGCTAATGGTTGCATAAATCATGACTGTAAGTTGCCTTATATTCGAGTCGGTGAGCTATCTTGTGCTCGTTGAGTTTCACTTTCTCGTATTCTTCTATAACCAAGGACTCAAACTACCGGAAAACCTGGCAAATGGATTTATAGATGAAACGTATTCTTTATTTTAAAATGTTTAACACGCTCGATTTTCGAAGAAAGTAAGAAATATTAGAAATGAATTAGAGGTTGTGTTTTATTGTCTTTCTTAGTGATTATTATATCTTTAGAATCGTTTATGATATGCTTAATTTTAGCTTCAGTAGGTAACTTCATCTGAAAATTCCGTTTGAAAGACTTAGAGAAATACTCGCAACTAGGATATGGATGAAAGTATAACGACAAATCTATCCATTTTTGGGTTCAGTCCAGTAAGTAAGATGGCACCGTGACTGCCACAAACCCTCATTTTCATTGGCTTGTTGGTATTTGGTGTTTTTGTTTTCTGGCCAGTGTTCTATATTTTGCAATAAGTTGAGCTCATTGGTCATCTGTATCGTCATAATGACAATATTTTCTTAGTGAATCTATTGTTAGTTTCTATATTTCCACTCTTACCTTTGAGAATATGCCTTTTCAGATCAACTATATATTAGGAGGCGTAGCACGGAATGTTGCTGAATGCATGTCAAAGCTTGGGAGCAACCCTTTTATGATTAGTGTGGTGGGACATGACATGGCAGGTTCTTAACTGATCTTGTGTCGTTTTGTTTTTGTACGTCTACTGTGATATGTGACATTCTAGAGTGGCAGATTGGTTTTCTTCACATTCATGTCTTTCTTGGTTCAATGTAACTCAGATGGATTCACAGTTCATTATTTATGGTCTCCTCCCTCGAATTTTGGAAAATATTTTATACAGATATTACGAAGAAAAAAGACGTTTTACATTTTTTTTTCTAACTCTTTTTCCTCCCCTGAAATAGGGAATCTCTTGTTTGAGAATTGGAGATTGGCAGGGTTATCAACAGAAGGTAAATCTGTCTATCCATATAATTGCCATCTATACTAGCTAGTATCAGTTAATGAAATATGGTACTTCATTTTATGTTTTTCCAAATTTTCTTCTATTCTGGTGTTCACCATATGTGGTATTATCCCGCAACTGTTATTTAGTGTTCCAACGTAAACGGTTTTTTGGAGCATTCTATGTGCGTGAGTTGGGATGGAACTATTTAAACCTTAAATAGAATCTACCACAAGTTCTGATGAAATATAACAATTTTTATTTCACTTTTGAATTGACTGTTTTTAGAATGTCCCCATAACAATCACGACAACAAATCTGTAGTCGATTGTGCCTTGGATTGTGAATCATTCAGAAGTTACAATCTAGATTTGGTTGTTCCTTTTGAGCAATCTATTAACAACAAATCAGCTGGTAGAACTCAGTAACGTGGTGCAAGTTGCATAAACAGCATAATGAGCAATCTGCTTTGAGATCTTTTCTTGAAATGAACTCTTGCATTAGGATATCACTGGCCGCTGAGTGAATTTTACAACTTCCTAACAATAAACCATATTTATCCTTCTGACTTCCTTATCTTTGAATCCTTGATGGAAGTTAATGAAGTGAAAAAAAAAAAAGTATCAAACTAGGTTGAAAGAAAATTATTACTTGGTTATTAAACATATACTTAGTGAAGATAGAAATGATACACTTTCTAGAACAATTTCATGTTTGAATAGGCATTCGGAAGCACCAAGACATCAGCACTGCTGTTGTGTGTGCCGTAGTTGATGTCCATGGAGAATTGGCAGCTGCTGTGGCTAGTGTGGAAGCTATTGTAAGTGGACGTTTATAAATAGATTTATATTCTTCCAAGTATTTAGTATTGTGAATCTTGTATAAGATTGATGGTAGTACCACAAGGAACTGAGACCGCATTACACAGGAAAAATTTCTCACACCTGATTGGATTGAGAAATTCAAGTGCAATATTCGTGCTGCACCGGTGGTTATGGTTGATGCAAATCTAAATCCACATGCTCTGAAAGTCTCTTGCCAAAGTATACTCTTTTTCTTTATAGCTTCCTCTGCTTGTCTTTGTTGGTCTGTGTTAACATCTCTGTATATCTTTTCCTGCATCTTTTTCTTAGTTGCTGCCGAGTATGATACTCCAGTGTGGTTTGAGCCTGTGTCAGTTGCTAAATCAAGAAGGGTTGCTTCAGTTGCCAAGTATGTGAGTTCACATCTCCTCATGCAAATATTTTCTCTTAAAGTTTGAGGAGTTTTTCACTTGCGAGAAATTTTTTATTTGTCATTTCTTTCCTTACTGAGGTGGTTTGATTTCCCTGTTTTTTTTTTTCGAATGAAAATGGCGACAAAAAAATTCTGAGGTGGTTTTGCATTGGAATTGTAACAAAATTCTGACTTGCCTGCTCATAATTGGAGATCAATTGAACTTTAGTTCAGTTTGTCTAAAAGTTAATGAAAAACGGGAAAGGATAAACGATGTTCACAGGTATAAATCATTATAGCTTCCTTGTTGTTCATTCGTTTTCAGGAAAAAAAAAAAAAAAGATCTGAAAATTGGATCTGCCAGTAAATATTATATAAATTTGTCATCAGGGGGATCAGTAGATTCGTAGTCTATTTGCCTTTCCTCTGTCTACAACTTCATTAACATCATGTTCGCATTGTATGAGTTTCTGATGCTTCTTGCAACAATATTTACTTGCCATATTGTTTTCATAATCTAGAGATTTAGCACCTGATCGTATGTCTCACATTTGAAAAGTTTTTCTAATTTACAGCCATTTGATTTTCTACATTTTCTTTAATAATGCATAACTTCTCGTTTTTGCAGATAAGTTTCACTTCCCCTAATGAAGATGAACTTATCGCCATGGCCAATGCATTATCTGGTCAAGATTTGTTTTCTCCTATCAAACGAGATAATACCATTACTAGTTCAATTGAATCTTTTTTCGAACAACTGAAATCTGCTGTATGGGTTTTGCTTGAGAAAGGTATCAAGGTCGTCATTCTGACCGTTGGTTCTCGCGGGGTATTCGTCTGTTCTAAAGGCGGGCCAAGCTTCGTGAAAAAAATTTCAAAAGAAATCAACAATTATGGGTCCAGCAGCCAACTATTTAGAACCTTAGCTACGAGTTGTCCACCAAACATGTTCTCAGTTTCTCCTGAAACAGAGAAAAACTCTGTTCTTTTTGCAATGCACTTCCCTGCCCTTCCTGCATCAGTAGTGAGGCTTACAGGCTGCGGAGATTGCTTGGTTGGTGGCATGCTTGCTTCCTTTTGCGCTGGCTTAAATATCTACCAAAGTACAGCCATTGGAATTGCAGCTGCCAAAGCTGCTGTCGAGACCGAAAACAACGTACCCCGTGAATTTCATTCAAACGAAATTGCAGGTACGAGTGTCACTTCACCTTTTGTCAACGACTTTACTATACTAATTTGGTTCATTTAGTTTAGGGTCCATCTGATTACAACCATGCAGTTGAGAAATGTAGTTCCAACTCCGAAGTTTTATTGACAAAACATTAGTTGGTGTATAGAACTTACCGAGACCTTAAATCTTATCTACCTTTACTTTTGAAATAAAAGAGTTCAAATGTAAGATCCCACGTCAGTTGAAGAGGGAAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACTCTGAGGGGAAGCCCAAAAGTGAAAGTCCAAAGGGAACAATATCTGCTGATGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGCCAGACACCAACCGGTGTGCGAGCGAGGACACTGAGCTCCAAAGGGGGTGGATTGTGAGATCCCCCATCGATTGGAGAGTAGAACAAAACATTTCTTGTAACGGTGTAGAAACCTCTTCGTAGTAGACGCTTTTTAAAAATCTTGAGGGAAAGCCCAAAAATGACAGTATCGGCTAGCGGTGGGCTTGAGCACACGAAAAAAGATAGTTTTTTTTTTTTTTTTTTCGGAAAATCAAACTAAAAGATTGGTTGTTTCTTTTAGTATTTACTGCCCGTCATCTCACCTTCTTTTTGTAATGCAGATGATGCCAGGTTAGTGTACACAGCAGGCAGAATTGTGTTCCATGGCCCCATGCCCTGAAACATTTATTTGGACTTCAACGCAAACACTGTAAACCTTAAATACCATGGTTTTGTCTTCAATTGTGAGGGTTGTAGCTGCGATAATGGTTTTCCATTACAAATGAGTTCACAATTTATTTGGAGTGTAGCCAAAATAACCCTTATAATTTCGGGTATTTTTTTTATTCATTTACTAAATTTAATAGGTCTTTCTAGTTTAACTACATACGGGGGAGATTCGAACTTTCAACCGTTGTTAAAATCGAACTTTCAACCGTTGTTAAAAATACATGATTTATGTCAGCTGAGTTATGTTCACATTGGTTTAAACTAAGAAACATGTCAATACATCCTTGGTTTCTAAATTTTATTATGCTTTAAAAAAAAAACTTAAAAAAAAAAACTTTAGTATATAACAATTTAGCAATGTAGTTAAATTTTGTCCTTAAACTTTCATAAATTTCATCCTTAAACTTTTATATGCAATTAAATTTCGTCCTTAAACTTTCATAAATTTCGTCCTTAAACTTTCATATGCAATGCAAATTTATAATTTTCGTTTTCATATCTCGAAATTTTGTTACCCATTTATATAATAATTTTCATGTAATTTTAAATTATTAAAACAAAATTGTTATAAATTTTGAAATAAATTATAATAAATTTTAAACGACCAAAATTTTACCATTTTACAATTTTAAATATTAAAAATTAAAATTTAAAATCGAGGAGCCCACATGTTCTTTGATATGGCAGCTGGAGTATAAAGGCGAACACAACACAGACAAACCTTCGTAGCTATGAAGCTTCTAAAGTTGCTGTTTTGTATAGCTTCTTCTTCTTGTTCATCTGCCCAATGAAACCCTGACCTCGATTCAATCTACTGCCCGTTCTTTCAGTTTGGCAGTATATTTATATGCAAATGAGGCATCTGAAACATGGGTTACTATGCCATGTCCAAGCCATCAAATCCGGGTTTACGCCCACCATTTTCACGTCGAATCAACTCATAAGTTTGTATGCGAAACATGGTCTTCTTGGCGATGCCCACAAAGTGTTCGACGAAATGCCTGAACGGAATGTCTTCTCATGGAATGCGATAATTGCAGCGTATATCAAGTCTCAGAACTTGAGAAAAGCGCGGGAATTATTTGACTCCGCTCACTATAGAGATTTGGTTACTTACAACTCAATGTTGTCTGGTTATGTTAGCTCTGATGGGTATGAGTCTCAAGCACTTGGGCTTTTTGTGGAAATGCAAACAGCCCCTGATATGATTAGAATTGATGAGTTTAGTCTTACAATCATGCTTAATTTAACTGCTAAGTTATGTGTGCTGTCTTATGGTAAACAGTTACATACCTTCATGTTGAAGACTGCTAATGATTTAAGCGTTTTTGCTGCTAGTTCCTTAATTGATATGTACTCTAAGTGTGGATGTTTTAAAGAAGCTTGTAGAGTTTATGATGGATGTGGTGAGGTTATTGATTTGGTCTCTAGAAATGCCATGGTAGCAGCTTGTTGTAGAGCAGGGGAGATAGATTTGGCTGTGGATCTTTTCTCGAGGGAACGGGATCGAAATGATGTTGTAGCATGGAACACGATGATATCGGGTTTTGTTCAGAACGGTTACGACGAAGAGTCATTAAAGTTATTCGTTAATATGGCAGATGAAAATGTTAGGTGGAATGAACACACTTTTGCAAGTGTCTTGAGTGCTTGCTCCAATCTAAAGAGCTTGAAGCTTGGAAAGGAAATCCATGCTTATGTTTTGAAGAATGGGTTGATTGTTAATCCCTTCATTGGCAGTGGCCTTGTTGATGTATACTGCAAGTGCAATAACATGAGGTATGCCGAGTCGGTTCATTCGGAATTGACAACACGAAATGTATACTCGATCACTTCAATGATTGTTGGCTATTCTTCTCAAGGTAACATGGTAGAAGCCAGAAGGCTTTTTGATTCCTTGGATGAAAAGAATTCTGTCGTGTGGACTGCTTTATTTACTGAATATGTCAAATCACAGCAATTTGAAGCAGTTTTTGAACTTTTAAGTGAATATAGGAAGGAGGCAGCTGTTCCTGATGTGCTGATTCTTGTCAGCATAATTGGTGCTTGTGCTAGACAAGCTGCTCTGGCTCCCGGGAAGCAGATACACGGTTACATGCTCCGAGCAGGCATCGAATTCGACGTGAAACTAGCCAGTTCATTGGTTGATATGTACTCAAAATGTGGAAGTATCATTTATGCAGAGAGAATTTTCAGAGAAGTTCTTGACAAGGATTCTATTCTTTACAACATTATGATAGCTGGCTATGCTCACCATGGGTGGGAAAATGAAGCAGTTCATCTTTTCAAGGAAATGACGGAAAACGATCTCAAACCAGATGCAATCACTTTCATTGCACTACTTTCTGCATGTCGACACAGCGGTTTAGTCGAACTAGGTGAGCGTTTTTTCAACTCTATGACTAATGATTACAATATTAGTCCCGAAATCGATCATTATGCTTGTATGATCGATTTGTACGGAAGGGCTAATGAACTAGACAAGGCATTGGCATTCATGAAAAGGATTCCCATAGAGTTGGATGCTGTCATATGGGGAGCATTTCTGAATGCTTGTAGGATCAATGGGAATACTGAACTTGCTAGAGAAGCAGAAGACGAACTGTTGATGATCGAAGGAGAAAACAGCGCTCGATATGTGCAGTTAGCGAATGTTTATGCTGCAGAAGGGAATTGGGAGGAGATGGGGCGAATAAGGAAGAAGATGAAAGGAAAGGATGTTAAGAAGAATGCTGGTTTTAGTTGGGTTTTTGTGGAAAATAAGTTCCATGTGTTCATTTCTGGTGATAGGTTTCACTTACAAAATGAGGCTATATATTCAACCTTAGCCTCCTTGACTGATGAGTTGCTTGCAGGAGAGGAAGCATTTTGTTAA

mRNA sequence

AAAAAATGACCGAACTTAGACCCAAAATTTCTCATTGATCATAGAGTGGTGAGGGTGGGTGGTTCGTCTTTGTATCCGTCCAGCAGAAGAACTGAATTCAACTCTGGTCTTCGAATTTCACTTTCAGTAGTCCACTGAAAGGTTTGGAGATTGGAAGCCATGGAGAGAAGTGCTCGGAGGCGGATCAATTTGATTCATCGTCACCTTCTTTCGCCGCCATGTGAGTTCAACAACGCTCTTAATCCGGCGCCAACGAATAGTGGAAACCAATTGGAAATTGGTGTGGCTGAGCCTGTGATTGTTGGAGGTATGGTGCTGGATATTCACGCCATACCATCCATTTCCGCCGTTCCGAGGTCAACTACGCCCGGAAAGATCAACTATATATTAGGAGGCGTAGCACGGAATGTTGCTGAATGCATGTCAAAGCTTGGGAGCAACCCTTTTATGATTAGTGTGGTGGGACATGACATGGCAGGGAATCTCTTGTTTGAGAATTGGAGATTGGCAGGGTTATCAACAGAAGGCATTCGGAAGCACCAAGACATCAGCACTGCTGTTGTGTGTGCCGTAGTTGATGTCCATGGAGAATTGGCAGCTGCTGTGGCTAGTGTGGAAGCTATTGAAAAATTTCTCACACCTGATTGGATTGAGAAATTCAAGTGCAATATTCGTGCTGCACCGGTGGTTATGGTTGATGCAAATCTAAATCCACATGCTCTGAAAGTCTCTTGCCAAATTGCTGCCGAGTATGATACTCCAGTGTGGTTTGAGCCTGTGTCAGTTGCTAAATCAAGAAGGGTTGCTTCAGTTGCCAAGTATATAAGTTTCACTTCCCCTAATGAAGATGAACTTATCGCCATGGCCAATGCATTATCTGGTCAAGATTTGTTTTCTCCTATCAAACGAGATAATACCATTACTAGTTCAATTGAATCTTTTTTCGAACAACTGAAATCTGCTGTATGGGTTTTGCTTGAGAAAGGTATCAAGGTCGTCATTCTGACCGTTGGTTCTCGCGGGGTATTCGTCTGTTCTAAAGGCGGGCCAAGCTTCGTGAAAAAAATTTCAAAAGAAATCAACAATTATGGGTCCAGCAGCCAACTATTTAGAACCTTAGCTACGAGTTGTCCACCAAACATGTTCTCAGTTTCTCCTGAAACAGAGAAAAACTCTGTTCTTTTTGCAATGCACTTCCCTGCCCTTCCTGCATCAGTAGTGAGGCTTACAGGCTGCGGAGATTGCTTGGTTGGTGGCATGCTTGCTTCCTTTTGCGCTGGCTTAAATATCTACCAAAGTACAGCCATTGGAATTGCAGCTGCCAAAGCTGCTGTCGAGACCGAAAACAACGTACCCCGTGAATTTCATTCAAACGAAATTGCAGTTTGGCAGTATATTTATATGCAAATGAGGCATCTGAAACATGGGTTACTATGCCATGTCCAAGCCATCAAATCCGGAGATTTGGTTACTTACAACTCAATGTTGTCTGGTTATGTTAGCTCTGATGGGTATGAGTCTCAAGCACTTGGGCTTTTTGTGGAAATGCAAACAGCCCCTGATATGATTAGAATTGATGAGTTTAGTCTTACAATCATGCTTAATTTAACTGCTAAGTTATGTGTGCTGTCTTATGGTAAACAGTTACATACCTTCATGTTGAAGACTGCTAATGATTTAAGCGTTTTTGCTGCTAGTTCCTTAATTGATATGTACTCTAAGTGTGGATGTTTTAAAGAAGCTTGTAGAGTTTATGATGGATGTGGTGAGGTTATTGATTTGGTCTCTAGAAATGCCATGGTAGCAGCTTGTTGTAGAGCAGGGGAGATAGATTTGGCTGTGGATCTTTTCTCGAGGGAACGGGATCGAAATGATGTTGTAGCATGGAACACGATGATATCGGGTTTTGTTCAGAACGGTTACGACGAAGAGTCATTAAAGTTATTCGTTAATATGGCAGATGAAAATGTTAGGTGGAATGAACACACTTTTGCAAGTGTCTTGAGTGCTTGCTCCAATCTAAAGAGCTTGAAGCTTGGAAAGGAAATCCATGCTTATGTTTTGAAGAATGGGTTGATTGTTAATCCCTTCATTGGCAGTGGCCTTGTTGATGTATACTGCAAGTGCAATAACATGAGGTATGCCGAGTCGGTTCATTCGGAATTGACAACACGAAATGTATACTCGATCACTTCAATGATTGTTGGCTATTCTTCTCAAGGTAACATGGTAGAAGCCAGAAGGCTTTTTGATTCCTTGGATGAAAAGAATTCTGTCGTGTGGACTGCTTTATTTACTGAATATGTCAAATCACAGCAATTTGAAGCAGTTTTTGAACTTTTAAGTGAATATAGGAAGGAGGCAGCTGTTCCTGATGTGCTGATTCTTGTCAGCATAATTGGTGCTTGTGCTAGACAAGCTGCTCTGGCTCCCGGGAAGCAGATACACGGTTACATGCTCCGAGCAGGCATCGAATTCGACGTGAAACTAGCCAGTTCATTGGTTGATATGTACTCAAAATGTGGAAGTATCATTTATGCAGAGAGAATTTTCAGAGAAGTTCTTGACAAGGATTCTATTCTTTACAACATTATGATAGCTGGCTATGCTCACCATGGGTGGGAAAATGAAGCAGTTCATCTTTTCAAGGAAATGACGGAAAACGATCTCAAACCAGATGCAATCACTTTCATTGCACTACTTTCTGCATGTCGACACAGCGGTTTAGTCGAACTAGGTGAGCGTTTTTTCAACTCTATGACTAATGATTACAATATTAGTCCCGAAATCGATCATTATGCTTGTATGATCGATTTGTACGGAAGGGCTAATGAACTAGACAAGGCATTGGCATTCATGAAAAGGATTCCCATAGAGTTGGATGCTGTCATATGGGGAGCATTTCTGAATGCTTGTAGGATCAATGGGAATACTGAACTTGCTAGAGAAGCAGAAGACGAACTGTTGATGATCGAAGGAGAAAACAGCGCTCGATATGTGCAGTTAGCGAATGTTTATGCTGCAGAAGGGAATTGGGAGGAGATGGGGCGAATAAGGAAGAAGATGAAAGGAAAGGATGTTAAGAAGAATGCTGGTTTTAGTTGGGTTTTTGTGGAAAATAAGTTCCATGTGTTCATTTCTGGTGATAGGTTTCACTTACAAAATGAGGCTATATATTCAACCTTAGCCTCCTTGACTGATGAGTTGCTTGCAGGAGAGGAAGCATTTTGTTAA

Coding sequence (CDS)

ATGGAGAGAAGTGCTCGGAGGCGGATCAATTTGATTCATCGTCACCTTCTTTCGCCGCCATGTGAGTTCAACAACGCTCTTAATCCGGCGCCAACGAATAGTGGAAACCAATTGGAAATTGGTGTGGCTGAGCCTGTGATTGTTGGAGGTATGGTGCTGGATATTCACGCCATACCATCCATTTCCGCCGTTCCGAGGTCAACTACGCCCGGAAAGATCAACTATATATTAGGAGGCGTAGCACGGAATGTTGCTGAATGCATGTCAAAGCTTGGGAGCAACCCTTTTATGATTAGTGTGGTGGGACATGACATGGCAGGGAATCTCTTGTTTGAGAATTGGAGATTGGCAGGGTTATCAACAGAAGGCATTCGGAAGCACCAAGACATCAGCACTGCTGTTGTGTGTGCCGTAGTTGATGTCCATGGAGAATTGGCAGCTGCTGTGGCTAGTGTGGAAGCTATTGAAAAATTTCTCACACCTGATTGGATTGAGAAATTCAAGTGCAATATTCGTGCTGCACCGGTGGTTATGGTTGATGCAAATCTAAATCCACATGCTCTGAAAGTCTCTTGCCAAATTGCTGCCGAGTATGATACTCCAGTGTGGTTTGAGCCTGTGTCAGTTGCTAAATCAAGAAGGGTTGCTTCAGTTGCCAAGTATATAAGTTTCACTTCCCCTAATGAAGATGAACTTATCGCCATGGCCAATGCATTATCTGGTCAAGATTTGTTTTCTCCTATCAAACGAGATAATACCATTACTAGTTCAATTGAATCTTTTTTCGAACAACTGAAATCTGCTGTATGGGTTTTGCTTGAGAAAGGTATCAAGGTCGTCATTCTGACCGTTGGTTCTCGCGGGGTATTCGTCTGTTCTAAAGGCGGGCCAAGCTTCGTGAAAAAAATTTCAAAAGAAATCAACAATTATGGGTCCAGCAGCCAACTATTTAGAACCTTAGCTACGAGTTGTCCACCAAACATGTTCTCAGTTTCTCCTGAAACAGAGAAAAACTCTGTTCTTTTTGCAATGCACTTCCCTGCCCTTCCTGCATCAGTAGTGAGGCTTACAGGCTGCGGAGATTGCTTGGTTGGTGGCATGCTTGCTTCCTTTTGCGCTGGCTTAAATATCTACCAAAGTACAGCCATTGGAATTGCAGCTGCCAAAGCTGCTGTCGAGACCGAAAACAACGTACCCCGTGAATTTCATTCAAACGAAATTGCAGTTTGGCAGTATATTTATATGCAAATGAGGCATCTGAAACATGGGTTACTATGCCATGTCCAAGCCATCAAATCCGGAGATTTGGTTACTTACAACTCAATGTTGTCTGGTTATGTTAGCTCTGATGGGTATGAGTCTCAAGCACTTGGGCTTTTTGTGGAAATGCAAACAGCCCCTGATATGATTAGAATTGATGAGTTTAGTCTTACAATCATGCTTAATTTAACTGCTAAGTTATGTGTGCTGTCTTATGGTAAACAGTTACATACCTTCATGTTGAAGACTGCTAATGATTTAAGCGTTTTTGCTGCTAGTTCCTTAATTGATATGTACTCTAAGTGTGGATGTTTTAAAGAAGCTTGTAGAGTTTATGATGGATGTGGTGAGGTTATTGATTTGGTCTCTAGAAATGCCATGGTAGCAGCTTGTTGTAGAGCAGGGGAGATAGATTTGGCTGTGGATCTTTTCTCGAGGGAACGGGATCGAAATGATGTTGTAGCATGGAACACGATGATATCGGGTTTTGTTCAGAACGGTTACGACGAAGAGTCATTAAAGTTATTCGTTAATATGGCAGATGAAAATGTTAGGTGGAATGAACACACTTTTGCAAGTGTCTTGAGTGCTTGCTCCAATCTAAAGAGCTTGAAGCTTGGAAAGGAAATCCATGCTTATGTTTTGAAGAATGGGTTGATTGTTAATCCCTTCATTGGCAGTGGCCTTGTTGATGTATACTGCAAGTGCAATAACATGAGGTATGCCGAGTCGGTTCATTCGGAATTGACAACACGAAATGTATACTCGATCACTTCAATGATTGTTGGCTATTCTTCTCAAGGTAACATGGTAGAAGCCAGAAGGCTTTTTGATTCCTTGGATGAAAAGAATTCTGTCGTGTGGACTGCTTTATTTACTGAATATGTCAAATCACAGCAATTTGAAGCAGTTTTTGAACTTTTAAGTGAATATAGGAAGGAGGCAGCTGTTCCTGATGTGCTGATTCTTGTCAGCATAATTGGTGCTTGTGCTAGACAAGCTGCTCTGGCTCCCGGGAAGCAGATACACGGTTACATGCTCCGAGCAGGCATCGAATTCGACGTGAAACTAGCCAGTTCATTGGTTGATATGTACTCAAAATGTGGAAGTATCATTTATGCAGAGAGAATTTTCAGAGAAGTTCTTGACAAGGATTCTATTCTTTACAACATTATGATAGCTGGCTATGCTCACCATGGGTGGGAAAATGAAGCAGTTCATCTTTTCAAGGAAATGACGGAAAACGATCTCAAACCAGATGCAATCACTTTCATTGCACTACTTTCTGCATGTCGACACAGCGGTTTAGTCGAACTAGGTGAGCGTTTTTTCAACTCTATGACTAATGATTACAATATTAGTCCCGAAATCGATCATTATGCTTGTATGATCGATTTGTACGGAAGGGCTAATGAACTAGACAAGGCATTGGCATTCATGAAAAGGATTCCCATAGAGTTGGATGCTGTCATATGGGGAGCATTTCTGAATGCTTGTAGGATCAATGGGAATACTGAACTTGCTAGAGAAGCAGAAGACGAACTGTTGATGATCGAAGGAGAAAACAGCGCTCGATATGTGCAGTTAGCGAATGTTTATGCTGCAGAAGGGAATTGGGAGGAGATGGGGCGAATAAGGAAGAAGATGAAAGGAAAGGATGTTAAGAAGAATGCTGGTTTTAGTTGGGTTTTTGTGGAAAATAAGTTCCATGTGTTCATTTCTGGTGATAGGTTTCACTTACAAAATGAGGCTATATATTCAACCTTAGCCTCCTTGACTGATGAGTTGCTTGCAGGAGAGGAAGCATTTTGTTAA

Protein sequence

MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPSISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLSTEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVDANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALSGQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSFVKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGCGDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIAVWQYIYMQMRHLKHGLLCHVQAIKSGDLVTYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDELLAGEEAFC

Homology

[Close]

BLAST of Carg22028 vs. NCBI nr
Match: XP_023511614.1 (putative pentatricopeptide repeat-containing protein At3g18840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1921.0 bits (4975), Expect = 0.0e+00
Identity = 990/1101 (89.92%), Postives = 1003/1101 (91.10%), Query Frame = 0


Query: 1    MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60
            ME SARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS
Sbjct: 1    MESSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60

Query: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120
            ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS
Sbjct: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120

Query: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180
            TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD
Sbjct: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180

Query: 181  ANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALS 240
            ANLNP ALKVSCQIAAEYDTPVWFEPVSVAKSRRVASV KYISFTSPNEDELIAMANALS
Sbjct: 181  ANLNPLALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVVKYISFTSPNEDELIAMANALS 240

Query: 241  GQDLFSPIKRDNTITS-SIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSF 300
            GQDLFSPIKRDNTIT+ SIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVF+CSKGGPSF
Sbjct: 241  GQDLFSPIKRDNTITTCSIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFICSKGGPSF 300

Query: 301  VKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360
            VKKISKEIN Y SSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC
Sbjct: 301  VKKISKEINKYSSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360

Query: 361  GDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIA----------- 420
            GDCLVGGMLAS CAGLNIYQSTAIGIAAAKAAVETE NVP EFHSNEIA           
Sbjct: 361  GDCLVGGMLASICAGLNIYQSTAIGIAAAKAAVETEINVPHEFHSNEIADDARFNLLPAL 420

Query: 421  -VWQYIYMQMRHLKHGLLCHVQAIKSG---DLVTYNSMLSGYVS---------------- 480
             VWQYIYMQM+HLKHGLLCHVQAIKSG    + T N ++S Y                  
Sbjct: 421  SVWQYIYMQMKHLKHGLLCHVQAIKSGFTPTIFTSNQLISLYAKHGLLGDAHKVFDEMPE 480

Query: 481  ----------------------------------------------SDGYESQALGLFVE 540
                                                             YE+QALGLFVE
Sbjct: 481  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEAQALGLFVE 540

Query: 541  MQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKC 600
            MQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKC
Sbjct: 541  MQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKC 600

Query: 601  GCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISG 660
            GCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTM+SG
Sbjct: 601  GCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMVSG 660

Query: 661  FVQNGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVN 720
            FVQNGYD+ESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVN
Sbjct: 661  FVQNGYDKESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVN 720

Query: 721  PFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDE 780
            PFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEAR+LFDSLDE
Sbjct: 721  PFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARKLFDSLDE 780

Query: 781  KNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQI 840
            KNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQI
Sbjct: 781  KNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQI 840

Query: 841  HGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWE 900
            HGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWE
Sbjct: 841  HGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWE 900

Query: 901  NEAVHLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYAC 960
            NEAVHLFKEM ENDL+PDAITFIALLSACRHSGLVELGERFF+SMTNDYNISPEIDHYAC
Sbjct: 901  NEAVHLFKEMMENDLEPDAITFIALLSACRHSGLVELGERFFDSMTNDYNISPEIDHYAC 960

Query: 961  MIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGEN 1020
            MIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAE+ELLMIEGEN
Sbjct: 961  MIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEEELLMIEGEN 1020

Query: 1021 SARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQN 1024
            SARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQN
Sbjct: 1021 SARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQN 1080

[Close]

BLAST of Carg22028 vs. NCBI nr
Match: XP_022953024.1 (putative pentatricopeptide repeat-containing protein At3g18840 [Cucurbita moschata])

HSP 1 Score: 1917.9 bits (4967), Expect = 0.0e+00
Identity = 987/1099 (89.81%), Postives = 1001/1099 (91.08%), Query Frame = 0


Query: 1    MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60
            ME SARRRINLIHRHLLSPP EFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS
Sbjct: 1    MESSARRRINLIHRHLLSPPREFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60

Query: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120
            ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS
Sbjct: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120

Query: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180
            TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD
Sbjct: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180

Query: 181  ANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALS 240
            ANLNP ALK+SCQIAAEYDTPVWFEPVSVAKSRRVASV KYISFTSPNEDELIAMAN LS
Sbjct: 181  ANLNPLALKISCQIAAEYDTPVWFEPVSVAKSRRVASVVKYISFTSPNEDELIAMANTLS 240

Query: 241  GQDLFSPIKRDNTITS-SIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSF 300
            GQDLFSPIKRDNTIT+ SIESFFEQLKSAVWVLLEKGIKV+ILTVGSRGVFVCSKGGPSF
Sbjct: 241  GQDLFSPIKRDNTITTCSIESFFEQLKSAVWVLLEKGIKVIILTVGSRGVFVCSKGGPSF 300

Query: 301  VKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360
            VKK SKE NNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC
Sbjct: 301  VKKTSKEFNNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360

Query: 361  GDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIA---------VW 420
            GDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVP EFHSNEIA         VW
Sbjct: 361  GDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPHEFHSNEIAGFNLLPVLSVW 420

Query: 421  QYIYMQMRHLKHGLLCHVQAIKSG---DLVTYNSMLSGYVS------------------- 480
            QYIYMQM+HLKHGLLCHVQAIKSG    + T N ++S Y                     
Sbjct: 421  QYIYMQMKHLKHGLLCHVQAIKSGFTPTIFTSNQLISLYAKHGLLGDAHKVFDEMPERXX 480

Query: 481  -------------------------------------------SDGYESQALGLFVEMQT 540
                                                          YE+QALGLFVEMQT
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEAQALGLFVEMQT 540

Query: 541  APDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCF 600
            A DMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCF
Sbjct: 541  ASDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCF 600

Query: 601  KEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQ 660
            KEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQ
Sbjct: 601  KEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQ 660

Query: 661  NGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFI 720
            NGYD+ESLKLFVN ADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFI
Sbjct: 661  NGYDKESLKLFVNTADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFI 720

Query: 721  GSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNS 780
            GSG+VDVYCKCNNMRYAESVH ELTTRNVYSITSMIVGYSSQGNMVEAR+LFDSLDEKNS
Sbjct: 721  GSGVVDVYCKCNNMRYAESVHLELTTRNVYSITSMIVGYSSQGNMVEARKLFDSLDEKNS 780

Query: 781  VVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGY 840
            VVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGY
Sbjct: 781  VVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGY 840

Query: 841  MLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEA 900
            MLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEA
Sbjct: 841  MLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEA 900

Query: 901  VHLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMID 960
            VHLFKEM ENDL+PDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMID
Sbjct: 901  VHLFKEMMENDLEPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMID 960

Query: 961  LYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSAR 1020
            LYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSAR
Sbjct: 961  LYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSAR 1020

Query: 1021 YVQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAI 1025
            YVQLANVYAA+GNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHL+NEAI
Sbjct: 1021 YVQLANVYAAKGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLENEAI 1080

[Close]

BLAST of Carg22028 vs. NCBI nr
Match: XP_022972403.1 (putative pentatricopeptide repeat-containing protein At3g18840 [Cucurbita maxima])

HSP 1 Score: 1909.8 bits (4946), Expect = 0.0e+00
Identity = 986/1098 (89.80%), Postives = 999/1098 (90.98%), Query Frame = 0


Query: 1    MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60
            ME SARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS
Sbjct: 1    MESSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60

Query: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120
            ISAVPRSTTPGKINYILGGVARNVAECMSKLGS PFMISVVGHDMAGNLLFENWRLAGLS
Sbjct: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSTPFMISVVGHDMAGNLLFENWRLAGLS 120

Query: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180
            TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD
Sbjct: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180

Query: 181  ANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALS 240
            ANL+PHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASV KYISFTSPNEDELIAMANALS
Sbjct: 181  ANLSPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVVKYISFTSPNEDELIAMANALS 240

Query: 241  GQDLFSPIKRDNTITS-SIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSF 300
            GQDLFSPIKRDNTIT+ SIESFFEQLKSAVWVLLEKG+KVVILTVGSRGVFVCSKG PSF
Sbjct: 241  GQDLFSPIKRDNTITTCSIESFFEQLKSAVWVLLEKGVKVVILTVGSRGVFVCSKGCPSF 300

Query: 301  VKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360
            VKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC
Sbjct: 301  VKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360

Query: 361  GDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIA--------VWQ 420
            GDCLVGGMLAS CAGLNIYQSTAIGIAAAKAAVETENNVP EFHSNEIA        VWQ
Sbjct: 361  GDCLVGGMLASICAGLNIYQSTAIGIAAAKAAVETENNVPHEFHSNEIAVNLLPALSVWQ 420

Query: 421  YIYMQMRHLKHGLLCHVQAIKSG---DLVTYNSMLSGYVS-------------------- 480
            Y YMQM+HLKHGLLCHVQAIKSG    + T N ++S Y                      
Sbjct: 421  Y-YMQMKHLKHGLLCHVQAIKSGFTPTIFTSNQLISLYAKHGLLGDAHKVFDEMPERXXX 480

Query: 481  ------------------------------------------SDGYESQALGLFVEMQTA 540
                                                         YE+QALGLFVEMQTA
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEAQALGLFVEMQTA 540

Query: 541  PDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCFK 600
             DMIR+DEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCFK
Sbjct: 541  SDMIRLDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCFK 600

Query: 601  EACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQN 660
            EACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQN
Sbjct: 601  EACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQN 660

Query: 661  GYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIG 720
            GYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIG
Sbjct: 661  GYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIG 720

Query: 721  SGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNSV 780
            SGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEAR+LFDSLDEKNSV
Sbjct: 721  SGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARKLFDSLDEKNSV 780

Query: 781  VWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGYM 840
            VWTALF EYVKSQQFEAVFELLSEYRKEAAV DVLILVSIIGACARQAALAPGKQIHGYM
Sbjct: 781  VWTALFIEYVKSQQFEAVFELLSEYRKEAAVLDVLILVSIIGACARQAALAPGKQIHGYM 840

Query: 841  LRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAV 900
            LRAGIEF VKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAV
Sbjct: 841  LRAGIEFKVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAV 900

Query: 901  HLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMIDL 960
            HLFKEM END +PDAITFIALLSACRHSGLVELGERFF+SMTNDYNISPEIDHYACMIDL
Sbjct: 901  HLFKEMIENDFEPDAITFIALLSACRHSGLVELGERFFDSMTNDYNISPEIDHYACMIDL 960

Query: 961  YGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSARY 1020
            YGRANEL+KALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGEN ARY
Sbjct: 961  YGRANELNKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENGARY 1020

Query: 1021 VQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIY 1025
            VQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIY
Sbjct: 1021 VQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIY 1080

[Close]

BLAST of Carg22028 vs. NCBI nr
Match: XP_011659068.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18840 [Cucumis sativus])

HSP 1 Score: 1674.1 bits (4334), Expect = 0.0e+00
Identity = 861/1099 (78.34%), Postives = 932/1099 (84.80%), Query Frame = 0


Query: 1    MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60
            ME SA+RRINLIHRH  +PP +F N LN A TN GNQL+ GVA+PVIVGGMVLDIHAIPS
Sbjct: 1    MENSAQRRINLIHRHFHTPPSQFINTLNLAQTNGGNQLQTGVAQPVIVGGMVLDIHAIPS 60

Query: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120
            ISAVPRSTTPGKINYILGGVARNVAECMSKLG+NPF+ISVVGHDMAGNLLFENWRLAGLS
Sbjct: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGANPFLISVVGHDMAGNLLFENWRLAGLS 120

Query: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180
            T+GIRKH+DI TAVVCAVVD HGELAAAVASVEAIEKFLTP+WIE+FKCNIR APV+MVD
Sbjct: 121  TQGIRKHKDIGTAVVCAVVDFHGELAAAVASVEAIEKFLTPEWIEQFKCNIRDAPVLMVD 180

Query: 181  ANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALS 240
            ANLN  AL+VSCQ+AAEY+TPVWFEPVSVAKSRR+ASV KYISFTSPNEDELIAMANALS
Sbjct: 181  ANLNALALEVSCQMAAEYNTPVWFEPVSVAKSRRIASVVKYISFTSPNEDELIAMANALS 240

Query: 241  GQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSFV 300
            GQDLFSPIK+DN+IT  IESFFE+LKSAVWVLLEKGIKVV+LTVGSRGVFVCSKG PSF 
Sbjct: 241  GQDLFSPIKQDNSIT--IESFFEELKSAVWVLLEKGIKVVVLTVGSRGVFVCSKGQPSFT 300

Query: 301  KKIS-KEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGC 360
            K  S +E+N Y SSSQLFRTLATSCPPNMF VSP TEK+SVLFA+HFPALPASVVRLTGC
Sbjct: 301  KISSEEELNKYKSSSQLFRTLATSCPPNMFPVSPVTEKSSVLFAIHFPALPASVVRLTGC 360

Query: 361  GDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIA-----VWQ--- 420
            GDCLVGGML S CAGLNIYQSTAIGIA AKA VETE+NVP EFH+ +IA     V+    
Sbjct: 361  GDCLVGGMLTSICAGLNIYQSTAIGIATAKATVETEHNVPHEFHAAKIADDARLVYTAGR 420

Query: 421  -YIYMQMRHLKHGLLCHVQAIKSGDLVTY---NSMLSGYVS------------------- 480
             YI+M M+HLKHGLLCH+Q IKSG   T    N +++ Y                     
Sbjct: 421  LYIHMXMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNX 480

Query: 481  -------------------------------------------SDGYESQALGLFVEMQT 540
                                                          Y+ QALG F+EMQT
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQGQALGFFMEMQT 540

Query: 541  APDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCF 600
            APDMIRIDEF+L  MLNLTAKLCV+SYGKQLH+FMLKTANDL+VFAASSLIDMYSKCG F
Sbjct: 541  APDMIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFF 600

Query: 601  KEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQ 660
            KEACRVY GCGEV+D VSRNAMVAACCR GEID+A+DLF +E ++NDVVAWNTMISGFVQ
Sbjct: 601  KEACRVYYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQ 660

Query: 661  NGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFI 720
            NGY+EESLKLFV MADE V WNEHTFASVLSACSNL+SLKLGKE+HAYVLKN LI NPFI
Sbjct: 661  NGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFI 720

Query: 721  GSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNS 780
             SGLVDVYCKCNNMRYA+SV+SEL  +NVYSITSMIVGYSSQGNM EAR+LFDSLDEKNS
Sbjct: 721  CSGLVDVYCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNS 780

Query: 781  VVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGY 840
             VWTALF  YVK QQ EAVFELLSEYRKEA VPDVLIL+SIIGACA QAAL PGKQIH Y
Sbjct: 781  AVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSY 840

Query: 841  MLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEA 900
            MLRAGI+ D KL SSLVDMYSKCGSIIYAERIFREV DKDSI+YNIMIAGYAHHGWENEA
Sbjct: 841  MLRAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEA 900

Query: 901  VHLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMID 960
            V LFKEM ++  KPDAITF+ALLSACRH GLVELGE FF+SM+NDYNI PEIDHYACMID
Sbjct: 901  VQLFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMID 960

Query: 961  LYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSAR 1020
            LYGRAN+LDKAL FM++IPI+LDAVIWGAFLNACRINGN ELAR+AEDELL+IEGEN +R
Sbjct: 961  LYGRANQLDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSR 1020

Query: 1021 YVQLANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAI 1025
            YVQLANVYAAEGNWEEMGRIRKKMKGK+VKKNAG SWVFVE+KFHVFISGDRFH +NEAI
Sbjct: 1021 YVQLANVYAAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAI 1080

[Close]

BLAST of Carg22028 vs. NCBI nr
Match: XP_018836916.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18840 [Juglans regia])

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 639/1094 (58.41%), Postives = 778/1094 (71.12%), Query Frame = 0


Query: 1    MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60
            ME S +RR+  I RHLL      N  L+P     G  +  G AEPVI+GGMVLDIHA PS
Sbjct: 1    MESSVQRRVEAISRHLLL--TRPNPVLSPILLKGGQPIN-GEAEPVIIGGMVLDIHATPS 60

Query: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120
            + A PR+TTPGK+ Y+LGGVARNVAECMSKLG+ P+MIS VG DMAGNLL ++W+ AGLS
Sbjct: 61   MPANPRTTTPGKVRYVLGGVARNVAECMSKLGTKPYMISAVGLDMAGNLLIQHWKSAGLS 120

Query: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180
            TEGIRK QD+ T VVC ++DV+GELAAAVASVEAIE+FLTP+WI++FK NI  AP++MVD
Sbjct: 121  TEGIRKQQDVVTPVVCNILDVNGELAAAVASVEAIEEFLTPEWIQQFKDNICTAPILMVD 180

Query: 181  ANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALS 240
            ANL+P AL+ SCQIAAE + PVWFEPVSV+KSRR+ASVAKY+S  SPNEDELIAMANALS
Sbjct: 181  ANLSPLALEASCQIAAESNIPVWFEPVSVSKSRRIASVAKYVSIASPNEDELIAMANALS 240

Query: 241  GQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSFV 300
              ++F PI+R N    S ES F++LK A+W+LLEKGI++V+LT+GS GVF+CS+GGP+  
Sbjct: 241  CANVFPPIERGNKY--SAESLFQKLKPAIWLLLEKGIRMVVLTLGSDGVFLCSRGGPTVK 300

Query: 301  KKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGCG 360
            +   + I  + SS QL++ + +SCPP+    + + E++S LFA+HFPALPASVVRLTG G
Sbjct: 301  RANLERIKAFDSSGQLYKVVTSSCPPHWHDAT-DLERDSHLFAVHFPALPASVVRLTGAG 360

Query: 361  DCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIAVW-QYIY----- 420
            DCLVGG LAS CAGLNI QS A+GIAAAKAAVE E NVP  F    IA   + +Y     
Sbjct: 361  DCLVGGTLASICAGLNIMQSVAVGIAAAKAAVEAEANVPGAFSLATIADGARSVYSAAKV 420

Query: 421  -----MQMRHLKHGLLCHVQAIKSG---DLVTYNSMLSGY-------------------- 480
                 M MR L HGL+ HVQAIK+G    + T N ++  Y                    
Sbjct: 421  LFNQPMLMRSLNHGLIYHVQAIKAGLIPTIFTSNQVIHLYSKHGLMREARRLFDEMPEKN 480

Query: 481  ------------------------------------------VSSDGYESQALGLFVEMQ 540
                                                          GYE+ AL LF++MQ
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYEAHALKLFIDMQ 540

Query: 541  TAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGC 600
            +  + IRIDEF+LT MLNL AKL V+SYG+QLH++M+K+ANDLS FA SSLIDMYSKCGC
Sbjct: 541  SECEGIRIDEFTLTTMLNLIAKLGVVSYGRQLHSYMVKSANDLSGFAVSSLIDMYSKCGC 600

Query: 601  FKEACRVYDGCGE-VIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGF 660
            F+ A  V+ G    V+DLVS+NAMVAACCR G+++LA D+F  E + ND V+WNT+ISG+
Sbjct: 601  FEGAWWVFSGFDHGVVDLVSKNAMVAACCREGKLELASDIFWTEAELNDTVSWNTLISGY 660

Query: 661  VQNGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNP 720
             Q GY EE+L+LFV M     RWNE+TFASVLSACS LKSLKLG+E+HA+VLKNGL +NP
Sbjct: 661  AQIGYGEETLRLFVLMEKSGFRWNEYTFASVLSACSGLKSLKLGREVHAWVLKNGLCLNP 720

Query: 721  FIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEK 780
            FI SG+VDVYCKC N++YAESVHS + +RN                              
Sbjct: 721  FISSGIVDVYCKCGNIKYAESVHSAIESRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781  NSVVWTALFTEYVKSQQFEAVFELLSEYR-KEAAVPDVLILVSIIGACARQAALAPGKQI 840
                        ++SQQ EAVFELL E++ KE  VPD LILVS++ ACA QA L PGKQI
Sbjct: 781  XXXXXXXXXXXXIRSQQCEAVFELLREFQAKEGTVPDALILVSLLSACAIQADLGPGKQI 840

Query: 841  HGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWE 900
            H Y+LRAGIE D KL ++LVDMYSKCGSI +AE+I + V D+DS+LYN+MI+ YAHHG E
Sbjct: 841  HAYLLRAGIEMDEKLVTALVDMYSKCGSITFAEKIVQRVTDRDSVLYNVMISSYAHHGHE 900

Query: 901  NEAVHLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYAC 960
             EA+ LFKEM E  ++PDA+TF+ALLSACRH GLVE GE+FF+SM  DYNI PEIDHYAC
Sbjct: 901  TEAIQLFKEMVERSVRPDAVTFLALLSACRHCGLVEQGEQFFHSMRTDYNILPEIDHYAC 960

Query: 961  MIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGEN 1017
            MIDLYGRAN+L+KA+A MK IPIELDAVIWGAFLNACR NGNT  AREAE++LL  EG +
Sbjct: 961  MIDLYGRANQLEKAVALMKMIPIELDAVIWGAFLNACRTNGNTAFAREAEEKLLESEGVD 1020

[Close]

BLAST of Carg22028 vs. TAIR10
Match: AT3G18840.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 552.7 bits (1423), Expect = 4.6e-157
Identity = 292/641 (45.55%), Postives = 400/641 (62.40%), Query Frame = 0


Query: 383  IGIAAAKAAVETENNVPREFHSNEIAVWQYI---YMQMRHLKHGLLCHVQAIKSGDLVTY 442
            + + +    +    NV  E     +  W  +   Y++  ++K             DL+TY
Sbjct: 30   VNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITY 89

Query: 443  NSMLSGYVSSDGYESQALGLFVEM-QTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHT 502
            N++LSG+  +DG ES+A+ +F EM +   D I ID+F++T M+ L+AKL  + YG+QLH 
Sbjct: 90   NTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHG 149

Query: 503  FMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDG-CGEVIDLVSRNAMVAACCRAGEI 562
             ++KT ND + FA SSLI MYSKCG FKE C +++G C E +D V+RNAM+AA CR G+I
Sbjct: 150  VLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDI 209

Query: 563  DLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSA 622
            D A+ +F R  + ND                 EE+LK+ V+M +  ++W+EH+F +VL+ 
Sbjct: 210  DKALSVFWRNPELNDXXXXXXXXXXXXXXXXXEEALKMAVSMEENGLKWDEHSFGAVLNV 269

Query: 623  CSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSI 682
             S+LKSLK+GKE+HA VLKNG   N F+ SG+VDVYCKC NM+YAES H      N+YS 
Sbjct: 270  LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329

Query: 683  TSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEY-RKEAA 742
            +SMIVGYSSQG MVEA+RLFDSL EKN VVWTA+F  Y+  +Q ++V EL   +   E  
Sbjct: 330  SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN 389

Query: 743  VPDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAER 802
             PD L++VS++GAC+ QA + PGK+IHG+ LR GI  D KL ++ VDMYSKCG++ YAER
Sbjct: 390  TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAER 449

Query: 803  IFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRHSGL 862
            IF    ++D+++YN MIAG AHHG E                                  
Sbjct: 450  IFDSSFERDTVMYNAMIAGCAHHGHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 509

Query: 863  VELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRI-PIELDAVIWGAF 922
                          YNISPE  HY CMIDLYG+A  LDKA+  M+ I  +E DAVI GAF
Sbjct: 510  XXXXXXXXXXXXXAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAF 569

Query: 923  LNACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKDVK 982
            LNAC  N NTEL +E E++LL+IEG N +RY+Q+AN YA+ G W+EM RIR +M+GK+++
Sbjct: 570  LNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE 629

Query: 983  KNAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDEL 1017
              +G SW  ++ +FH+F S D  H + EAIY+ L  +T +L
Sbjct: 630  IFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDL 670

[Close]

BLAST of Carg22028 vs. TAIR10
Match: AT1G49350.1 (pfkB-like carbohydrate kinase family protein)

HSP 1 Score: 363.6 bits (932), Expect = 4.0e-100
Identity = 185/359 (51.53%), Postives = 256/359 (71.31%), Query Frame = 0


Query: 44  EPVIVGGMVLDIHAIPSISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGH 103
           EPVI+G ++LD+HA PS + +  +T PG++ +  GGVARNVA+C+ KLG  PFMI  +G 
Sbjct: 2   EPVIIGALILDVHAKPSTTPISGTTVPGQVLFAPGGVARNVADCIFKLGITPFMIGTLGL 61

Query: 104 DMAGNLLFENWRLAGLSTEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDW 163
           D   N+L + W+   LS +GI + +DIST +V  V D +GE+AA VA V+A+E FLTP+W
Sbjct: 62  DGPANVLLKEWK---LSMKGILRREDISTPIVSLVYDTNGEVAAGVAGVDAVENFLTPEW 121

Query: 164 IEKFKCNIRAAPVVMVDANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYIS 223
           I++F+ NI +A ++MVDANL+  AL+ SC++AAE   PVWFEPVSV KS+R+AS+AKY++
Sbjct: 122 IQRFEYNISSARLLMVDANLSSLALEASCKLAAESSVPVWFEPVSVTKSQRIASIAKYVT 181

Query: 224 FTSPNEDELIAMANALSGQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKGIKVVILT 283
             SPN+DELIAMANAL  ++LF P + D     SIE  F  LK A+ VLL+ G+KVVI+T
Sbjct: 182 IVSPNQDELIAMANALCAKNLFHPFRSDEN-KLSIEDMFRALKPAILVLLKNGVKVVIVT 241

Query: 284 VGSRGVFVCSKGGPSFVKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFA 343
           +GS G  +CSKG P     I ++   +  S ++F+ + + C PN FS    + ++  LFA
Sbjct: 242 LGSNGALLCSKGNPKKALNIDRK---FLRSGEVFKRVQSVCSPNRFS-ELGSNRSPSLFA 301

Query: 344 MHFPALPASVVRLTGCGDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREF 403
           MHFP +PA V +LTG GDCLVGG +AS   GL++ QS A+GIA+AKAAVE+++NVP EF
Sbjct: 302 MHFPTIPAKVKKLTGAGDCLVGGTVASLSDGLDLIQSLAVGIASAKAAVESDDNVPPEF 352

[Close]

BLAST of Carg22028 vs. TAIR10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 342.4 bits (877), Expect = 9.4e-94
Identity = 193/580 (33.28%), Postives = 307/580 (52.93%), Query Frame = 0


Query: 438  TYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLH 497
            +YN+M++GY S + +  +AL LF  + ++   +  DE SL+ +    A +  LS G Q++
Sbjct: 349  SYNAMITGY-SQEEHGFKALLLFHRLMSSG--LGFDEISLSGVFRACALVKGLSEGLQIY 408

Query: 498  TFMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEI 557
               +K++  L V  A++ IDMY KC    EA RV+D                        
Sbjct: 409  GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD------------------------ 468

Query: 558  DLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSA 617
                     E  R D V+WN +I+   QNG   E+L LFV+M    +  +E TF S+L A
Sbjct: 469  ---------EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 528

Query: 618  CSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSI 677
            C+   SL  G EIH+ ++K+G+  N  +G  L+D+Y KC  +  AE +HS    R     
Sbjct: 529  CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR----- 588

Query: 678  TSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAV 737
                   +                    V W ++ + YV  +Q E    L +   +    
Sbjct: 589  ------ANVXXXXXXXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 648

Query: 738  PDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERI 797
            PD     +++  CA  A+   GKQIH  +++  ++ DV + S+LVDMYSKCG +  +  +
Sbjct: 649  PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 708

Query: 798  FREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRHSGLV 857
            F + L +D + +N MI GYAHHG   EA+ LF+ M   ++KP+ +TFI++L AC H GL+
Sbjct: 709  FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 768

Query: 858  ELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWGAFLN 917
            + G  +F  M  DY + P++ HY+ M+D+ G++ ++ +AL  ++ +P E D VIW   L 
Sbjct: 769  DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 828

Query: 918  ACRIN-GNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKK 977
             C I+  N E+A EA   LL ++ ++S+ Y  L+NVYA  G WE++  +R+ M+G  +KK
Sbjct: 829  VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 880

Query: 978  NAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDEL 1017
              G SWV ++++ HVF+ GD+ H + E IY  L  +  E+
Sbjct: 889  EPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880

[Close]

BLAST of Carg22028 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 329.3 bits (843), Expect = 8.3e-90
Identity = 195/583 (33.45%), Postives = 309/583 (53.00%), Query Frame = 0


Query: 435  DLVTYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCV-LSYG 494
            DL+++NS+++G ++ +G E +A+ LF  MQ     ++ D++++T +L   + L   LS  
Sbjct: 380  DLISWNSVIAG-IAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 439

Query: 495  KQLHTFMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCR 554
            KQ+H   +K  N    F +++LID YS+  C KEA                         
Sbjct: 440  KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA------------------------- 499

Query: 555  AGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFAS 614
              EI     LF  ER   D+VAWN M++G+ Q+    ++LKLF  M  +  R ++ T A+
Sbjct: 500  --EI-----LF--ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 559

Query: 615  VLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRN 674
            V   C  L ++  GK++HAY +K+G  ++ ++ SG++D+Y KC                 
Sbjct: 560  VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC----------------- 619

Query: 675  VYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYRK 734
                          G+M  A+  FDS+   + V WT + +  +++ + E  F + S+ R 
Sbjct: 620  --------------GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 679

Query: 735  EAAVPDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIY 794
               +PD   + ++  A +   AL  G+QIH   L+     D  + +SLVDMY+KCGSI  
Sbjct: 680  MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 739

Query: 795  AERIFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRH 854
            A  +F+ +   +   +N M+ G A HG   E + LFK+M    +KPD +TFI +LSAC H
Sbjct: 740  AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 799

Query: 855  SGLVELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWG 914
            SGLV    +   SM  DY I PEI+HY+C+ D  GRA  + +A   ++ + +E  A ++ 
Sbjct: 800  SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 859

Query: 915  AFLNACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKD 974
              L ACR+ G+TE  +    +LL +E  +S+ YV L+N+YAA   W+EM   R  MKG  
Sbjct: 860  TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 894

Query: 975  VKKNAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDEL 1017
            VKK+ GFSW+ V+NK H+F+  DR + Q E IY  +  +  ++
Sbjct: 920  VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894

[Close]

BLAST of Carg22028 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-89
Identity = 195/608 (32.07%), Postives = 325/608 (53.45%), Query Frame = 0


Query: 413  IYMQMRHLKHGLLCHVQAIKSGDLVTYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRI 472
            IY  ++ L H  L   + +KS  ++ + S++  +     + S+AL  FVEM+ +      
Sbjct: 48   IYTNLK-LLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLF-SKALASFVEMRASGRC--P 107

Query: 473  DEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSK---CGCFKEAC 532
            D      +L     +  L +G+ +H F+++   D  ++  ++L++MY+K    G      
Sbjct: 108  DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 167

Query: 533  RVYDGCGE-VIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGY 592
             V+D   +   +    +     C     ID    +F     R DVV++NT+I+G+ Q+G 
Sbjct: 168  NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF-EVMPRKDVVSYNTIIAGYAQSGM 227

Query: 593  DEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSG 652
             E++L++   M   +++ +  T +SVL   S    +  GKEIH YV++ G+  + +IGS 
Sbjct: 228  YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 287

Query: 653  LVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVW 712
            LVD+Y K   +  +E V S L  R+  S  S++ GY   G   EA RLF           
Sbjct: 288  LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF----------- 347

Query: 713  TALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGYMLR 772
              + T  VK                    P  +   S+I ACA  A L  GKQ+HGY+LR
Sbjct: 348  RQMVTAKVK--------------------PGAVAFSSVIPACAHLATLHLGKQLHGYVLR 407

Query: 773  AGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAVHL 832
             G   ++ +AS+LVDMYSKCG+I  A +IF  +   D + +  +I G+A HG  +EAV L
Sbjct: 408  GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 467

Query: 833  FKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMIDLYG 892
            F+EM    +KP+ + F+A+L+AC H GLV+    +FNSMT  Y ++ E++HYA + DL G
Sbjct: 468  FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 527

Query: 893  RANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSARYVQ 952
            RA +L++A  F+ ++ +E    +W   L++C ++ N ELA +  +++  ++ EN   YV 
Sbjct: 528  RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 587

Query: 953  LANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIYST 1012
            + N+YA+ G W+EM ++R +M+ K ++K    SW+ ++NK H F+SGDR H   + I   
Sbjct: 588  MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 619

Query: 1013 LASLTDEL 1017
            L ++ +++
Sbjct: 648  LKAVMEQM 619

[Close]

BLAST of Carg22028 vs. Swiss-Prot
Match: sp|Q9LHN5|PP242_ARATH (Putative pentatricopeptide repeat-containing protein At3g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E92 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 8.3e-156
Identity = 292/641 (45.55%), Postives = 400/641 (62.40%), Query Frame = 0


Query: 383  IGIAAAKAAVETENNVPREFHSNEIAVWQYI---YMQMRHLKHGLLCHVQAIKSGDLVTY 442
            + + +    +    NV  E     +  W  +   Y++  ++K             DL+TY
Sbjct: 30   VNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITY 89

Query: 443  NSMLSGYVSSDGYESQALGLFVEM-QTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHT 502
            N++LSG+  +DG ES+A+ +F EM +   D I ID+F++T M+ L+AKL  + YG+QLH 
Sbjct: 90   NTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHG 149

Query: 503  FMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDG-CGEVIDLVSRNAMVAACCRAGEI 562
             ++KT ND + FA SSLI MYSKCG FKE C +++G C E +D V+RNAM+AA CR G+I
Sbjct: 150  VLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDI 209

Query: 563  DLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSA 622
            D A+ +F R  + ND                 EE+LK+ V+M +  ++W+EH+F +VL+ 
Sbjct: 210  DKALSVFWRNPELNDXXXXXXXXXXXXXXXXXEEALKMAVSMEENGLKWDEHSFGAVLNV 269

Query: 623  CSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSI 682
             S+LKSLK+GKE+HA VLKNG   N F+ SG+VDVYCKC NM+YAES H      N+YS 
Sbjct: 270  LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329

Query: 683  TSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEY-RKEAA 742
            +SMIVGYSSQG MVEA+RLFDSL EKN VVWTA+F  Y+  +Q ++V EL   +   E  
Sbjct: 330  SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN 389

Query: 743  VPDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAER 802
             PD L++VS++GAC+ QA + PGK+IHG+ LR GI  D KL ++ VDMYSKCG++ YAER
Sbjct: 390  TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAER 449

Query: 803  IFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRHSGL 862
            IF    ++D+++YN MIAG AHHG E                                  
Sbjct: 450  IFDSSFERDTVMYNAMIAGCAHHGHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 509

Query: 863  VELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRI-PIELDAVIWGAF 922
                          YNISPE  HY CMIDLYG+A  LDKA+  M+ I  +E DAVI GAF
Sbjct: 510  XXXXXXXXXXXXXAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAF 569

Query: 923  LNACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKDVK 982
            LNAC  N NTEL +E E++LL+IEG N +RY+Q+AN YA+ G W+EM RIR +M+GK+++
Sbjct: 570  LNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE 629

Query: 983  KNAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDEL 1017
              +G SW  ++ +FH+F S D  H + EAIY+ L  +T +L
Sbjct: 630  IFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDL 670

[Close]

BLAST of Carg22028 vs. Swiss-Prot
Match: sp|Q9FWA6|PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 1.7e-92
Identity = 193/580 (33.28%), Postives = 307/580 (52.93%), Query Frame = 0


Query: 438  TYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLH 497
            +YN+M++GY S + +  +AL LF  + ++   +  DE SL+ +    A +  LS G Q++
Sbjct: 349  SYNAMITGY-SQEEHGFKALLLFHRLMSSG--LGFDEISLSGVFRACALVKGLSEGLQIY 408

Query: 498  TFMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEI 557
               +K++  L V  A++ IDMY KC    EA RV+D                        
Sbjct: 409  GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD------------------------ 468

Query: 558  DLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSA 617
                     E  R D V+WN +I+   QNG   E+L LFV+M    +  +E TF S+L A
Sbjct: 469  ---------EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 528

Query: 618  CSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSI 677
            C+   SL  G EIH+ ++K+G+  N  +G  L+D+Y KC  +  AE +HS    R     
Sbjct: 529  CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR----- 588

Query: 678  TSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAV 737
                   +                    V W ++ + YV  +Q E    L +   +    
Sbjct: 589  ------ANVXXXXXXXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 648

Query: 738  PDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERI 797
            PD     +++  CA  A+   GKQIH  +++  ++ DV + S+LVDMYSKCG +  +  +
Sbjct: 649  PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 708

Query: 798  FREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRHSGLV 857
            F + L +D + +N MI GYAHHG   EA+ LF+ M   ++KP+ +TFI++L AC H GL+
Sbjct: 709  FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 768

Query: 858  ELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWGAFLN 917
            + G  +F  M  DY + P++ HY+ M+D+ G++ ++ +AL  ++ +P E D VIW   L 
Sbjct: 769  DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 828

Query: 918  ACRIN-GNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKK 977
             C I+  N E+A EA   LL ++ ++S+ Y  L+NVYA  G WE++  +R+ M+G  +KK
Sbjct: 829  VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 880

Query: 978  NAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDEL 1017
              G SWV ++++ HVF+ GD+ H + E IY  L  +  E+
Sbjct: 889  EPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880

[Close]

BLAST of Carg22028 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.5e-88
Identity = 195/583 (33.45%), Postives = 309/583 (53.00%), Query Frame = 0


Query: 435  DLVTYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCV-LSYG 494
            DL+++NS+++G ++ +G E +A+ LF  MQ     ++ D++++T +L   + L   LS  
Sbjct: 380  DLISWNSVIAG-IAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 439

Query: 495  KQLHTFMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCR 554
            KQ+H   +K  N    F +++LID YS+  C KEA                         
Sbjct: 440  KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA------------------------- 499

Query: 555  AGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFAS 614
              EI     LF  ER   D+VAWN M++G+ Q+    ++LKLF  M  +  R ++ T A+
Sbjct: 500  --EI-----LF--ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 559

Query: 615  VLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRN 674
            V   C  L ++  GK++HAY +K+G  ++ ++ SG++D+Y KC                 
Sbjct: 560  VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC----------------- 619

Query: 675  VYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYRK 734
                          G+M  A+  FDS+   + V WT + +  +++ + E  F + S+ R 
Sbjct: 620  --------------GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 679

Query: 735  EAAVPDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIY 794
               +PD   + ++  A +   AL  G+QIH   L+     D  + +SLVDMY+KCGSI  
Sbjct: 680  MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 739

Query: 795  AERIFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRH 854
            A  +F+ +   +   +N M+ G A HG   E + LFK+M    +KPD +TFI +LSAC H
Sbjct: 740  AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 799

Query: 855  SGLVELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWG 914
            SGLV    +   SM  DY I PEI+HY+C+ D  GRA  + +A   ++ + +E  A ++ 
Sbjct: 800  SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 859

Query: 915  AFLNACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKD 974
              L ACR+ G+TE  +    +LL +E  +S+ YV L+N+YAA   W+EM   R  MKG  
Sbjct: 860  TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 894

Query: 975  VKKNAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDEL 1017
            VKK+ GFSW+ V+NK H+F+  DR + Q E IY  +  +  ++
Sbjct: 920  VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894

[Close]

BLAST of Carg22028 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.3e-88
Identity = 195/608 (32.07%), Postives = 325/608 (53.45%), Query Frame = 0


Query: 413  IYMQMRHLKHGLLCHVQAIKSGDLVTYNSMLSGYVSSDGYESQALGLFVEMQTAPDMIRI 472
            IY  ++ L H  L   + +KS  ++ + S++  +     + S+AL  FVEM+ +      
Sbjct: 48   IYTNLK-LLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLF-SKALASFVEMRASGRC--P 107

Query: 473  DEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSK---CGCFKEAC 532
            D      +L     +  L +G+ +H F+++   D  ++  ++L++MY+K    G      
Sbjct: 108  DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 167

Query: 533  RVYDGCGE-VIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGY 592
             V+D   +   +    +     C     ID    +F     R DVV++NT+I+G+ Q+G 
Sbjct: 168  NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF-EVMPRKDVVSYNTIIAGYAQSGM 227

Query: 593  DEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSG 652
             E++L++   M   +++ +  T +SVL   S    +  GKEIH YV++ G+  + +IGS 
Sbjct: 228  YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 287

Query: 653  LVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVW 712
            LVD+Y K   +  +E V S L  R+  S  S++ GY   G   EA RLF           
Sbjct: 288  LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF----------- 347

Query: 713  TALFTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGYMLR 772
              + T  VK                    P  +   S+I ACA  A L  GKQ+HGY+LR
Sbjct: 348  RQMVTAKVK--------------------PGAVAFSSVIPACAHLATLHLGKQLHGYVLR 407

Query: 773  AGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAVHL 832
             G   ++ +AS+LVDMYSKCG+I  A +IF  +   D + +  +I G+A HG  +EAV L
Sbjct: 408  GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 467

Query: 833  FKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMIDLYG 892
            F+EM    +KP+ + F+A+L+AC H GLV+    +FNSMT  Y ++ E++HYA + DL G
Sbjct: 468  FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 527

Query: 893  RANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSARYVQ 952
            RA +L++A  F+ ++ +E    +W   L++C ++ N ELA +  +++  ++ EN   YV 
Sbjct: 528  RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 587

Query: 953  LANVYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIYST 1012
            + N+YA+ G W+EM ++R +M+ K ++K    SW+ ++NK H F+SGDR H   + I   
Sbjct: 588  MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 619

Query: 1013 LASLTDEL 1017
            L ++ +++
Sbjct: 648  LKAVMEQM 619

[Close]

BLAST of Carg22028 vs. Swiss-Prot
Match: sp|Q0WSH6|PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX=3702 GN=LOI1 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.5e-85
Identity = 194/641 (30.27%), Postives = 329/641 (51.33%), Query Frame = 0


Query: 380  STAIGIAAAKAAVETENNVPREFHSNEIAVWQYIYMQMRHLKHGLLCHVQAIKSGDLVTY 439
            S  +G       V+T ++ P  F +N +     +Y ++ H +   L  ++   + ++V++
Sbjct: 21   SMRLGRVVHARIVKTLDSPPPPFLANYLI---NMYSKLDHPESARLV-LRLTPARNVVSW 80

Query: 440  NSMLSGYVSSDGYESQALGLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTF 499
             S++SG ++ +G+ S AL  F EM+   + +  ++F+        A L +   GKQ+H  
Sbjct: 81   TSLISG-LAQNGHFSTALVEFFEMRR--EGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 140

Query: 500  MLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDL 559
             +K    L VF   S  DMY K     +A +++D                          
Sbjct: 141  AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFD-------------------------- 200

Query: 560  AVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSACS 619
                   E    ++  WN  IS  V +G   E+++ F+     +   N  TF + L+ACS
Sbjct: 201  -------EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 260

Query: 620  NLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITS 679
            +   L LG ++H  VL++G   +  + +GL+D Y KC  +R +E + +E+ T        
Sbjct: 261  DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-------- 320

Query: 680  MIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYRKEAAVPD 739
                                   KN+V W +L   YV++ + E    L    RK+     
Sbjct: 321  -----------------------KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 380

Query: 740  VLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFR 799
              ++ S++ ACA  A L  G+ IH + ++A +E  + + S+LVDMY KCG I  +E+ F 
Sbjct: 381  DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 440

Query: 800  EVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDL--KPDAITFIALLSACRHSGLV 859
            E+ +K+ +  N +I GYAH G  + A+ LF+EM        P+ +TF++LLSAC  +G V
Sbjct: 441  EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 500

Query: 860  ELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWGAFLN 919
            E G + F+SM + Y I P  +HY+C++D+ GRA  +++A  F+K++PI+    +WGA  N
Sbjct: 501  ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQN 560

Query: 920  ACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEMGRIRKKMKGKDVKKN 979
            ACR++G  +L   A + L  ++ ++S  +V L+N +AA G W E   +R+++KG  +KK 
Sbjct: 561  ACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKG 590

Query: 980  AGFSWVFVENKFHVFISGDRFHLQNEAIYSTLASLTDELLA 1019
            AG+SW+ V+N+ H F + DR H+ N+ I +TLA L +E+ A
Sbjct: 621  AGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 590

[Close]

BLAST of Carg22028 vs. TrEMBL
Match: tr|A0A2I4FZ41|A0A2I4FZ41_9ROSI (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18840 OS=Juglans regia OX=51240 GN=LOC109003287 PE=4 SV=1)

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 639/1094 (58.41%), Postives = 778/1094 (71.12%), Query Frame = 0


Query: 1    MERSARRRINLIHRHLLSPPCEFNNALNPAPTNSGNQLEIGVAEPVIVGGMVLDIHAIPS 60
            ME S +RR+  I RHLL      N  L+P     G  +  G AEPVI+GGMVLDIHA PS
Sbjct: 1    MESSVQRRVEAISRHLLL--TRPNPVLSPILLKGGQPIN-GEAEPVIIGGMVLDIHATPS 60

Query: 61   ISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISVVGHDMAGNLLFENWRLAGLS 120
            + A PR+TTPGK+ Y+LGGVARNVAECMSKLG+ P+MIS VG DMAGNLL ++W+ AGLS
Sbjct: 61   MPANPRTTTPGKVRYVLGGVARNVAECMSKLGTKPYMISAVGLDMAGNLLIQHWKSAGLS 120

Query: 121  TEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLTPDWIEKFKCNIRAAPVVMVD 180
            TEGIRK QD+ T VVC ++DV+GELAAAVASVEAIE+FLTP+WI++FK NI  AP++MVD
Sbjct: 121  TEGIRKQQDVVTPVVCNILDVNGELAAAVASVEAIEEFLTPEWIQQFKDNICTAPILMVD 180

Query: 181  ANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAKYISFTSPNEDELIAMANALS 240
            ANL+P AL+ SCQIAAE + PVWFEPVSV+KSRR+ASVAKY+S  SPNEDELIAMANALS
Sbjct: 181  ANLSPLALEASCQIAAESNIPVWFEPVSVSKSRRIASVAKYVSIASPNEDELIAMANALS 240

Query: 241  GQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKGIKVVILTVGSRGVFVCSKGGPSFV 300
              ++F PI+R N    S ES F++LK A+W+LLEKGI++V+LT+GS GVF+CS+GGP+  
Sbjct: 241  CANVFPPIERGNKY--SAESLFQKLKPAIWLLLEKGIRMVVLTLGSDGVFLCSRGGPTVK 300

Query: 301  KKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSVLFAMHFPALPASVVRLTGCG 360
            +   + I  + SS QL++ + +SCPP+    + + E++S LFA+HFPALPASVVRLTG G
Sbjct: 301  RANLERIKAFDSSGQLYKVVTSSCPPHWHDAT-DLERDSHLFAVHFPALPASVVRLTGAG 360

Query: 361  DCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPREFHSNEIAVW-QYIY----- 420
            DCLVGG LAS CAGLNI QS A+GIAAAKAAVE E NVP  F    IA   + +Y     
Sbjct: 361  DCLVGGTLASICAGLNIMQSVAVGIAAAKAAVEAEANVPGAFSLATIADGARSVYSAAKV 420

Query: 421  -----MQMRHLKHGLLCHVQAIKSG---DLVTYNSMLSGY-------------------- 480
                 M MR L HGL+ HVQAIK+G    + T N ++  Y                    
Sbjct: 421  LFNQPMLMRSLNHGLIYHVQAIKAGLIPTIFTSNQVIHLYSKHGLMREARRLFDEMPEKN 480

Query: 481  ------------------------------------------VSSDGYESQALGLFVEMQ 540
                                                          GYE+ AL LF++MQ
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYEAHALKLFIDMQ 540

Query: 541  TAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGC 600
            +  + IRIDEF+LT MLNL AKL V+SYG+QLH++M+K+ANDLS FA SSLIDMYSKCGC
Sbjct: 541  SECEGIRIDEFTLTTMLNLIAKLGVVSYGRQLHSYMVKSANDLSGFAVSSLIDMYSKCGC 600

Query: 601  FKEACRVYDGCGE-VIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGF 660
            F+ A  V+ G    V+DLVS+NAMVAACCR G+++LA D+F  E + ND V+WNT+ISG+
Sbjct: 601  FEGAWWVFSGFDHGVVDLVSKNAMVAACCREGKLELASDIFWTEAELNDTVSWNTLISGY 660

Query: 661  VQNGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNP 720
             Q GY EE+L+LFV M     RWNE+TFASVLSACS LKSLKLG+E+HA+VLKNGL +NP
Sbjct: 661  AQIGYGEETLRLFVLMEKSGFRWNEYTFASVLSACSGLKSLKLGREVHAWVLKNGLCLNP 720

Query: 721  FIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEK 780
            FI SG+VDVYCKC N++YAESVHS + +RN                              
Sbjct: 721  FISSGIVDVYCKCGNIKYAESVHSAIESRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781  NSVVWTALFTEYVKSQQFEAVFELLSEYR-KEAAVPDVLILVSIIGACARQAALAPGKQI 840
                        ++SQQ EAVFELL E++ KE  VPD LILVS++ ACA QA L PGKQI
Sbjct: 781  XXXXXXXXXXXXIRSQQCEAVFELLREFQAKEGTVPDALILVSLLSACAIQADLGPGKQI 840

Query: 841  HGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWE 900
            H Y+LRAGIE D KL ++LVDMYSKCGSI +AE+I + V D+DS+LYN+MI+ YAHHG E
Sbjct: 841  HAYLLRAGIEMDEKLVTALVDMYSKCGSITFAEKIVQRVTDRDSVLYNVMISSYAHHGHE 900

Query: 901  NEAVHLFKEMTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYAC 960
             EA+ LFKEM E  ++PDA+TF+ALLSACRH GLVE GE+FF+SM  DYNI PEIDHYAC
Sbjct: 901  TEAIQLFKEMVERSVRPDAVTFLALLSACRHCGLVEQGEQFFHSMRTDYNILPEIDHYAC 960

Query: 961  MIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGEN 1017
            MIDLYGRAN+L+KA+A MK IPIELDAVIWGAFLNACR NGNT  AREAE++LL  EG +
Sbjct: 961  MIDLYGRANQLEKAVALMKMIPIELDAVIWGAFLNACRTNGNTAFAREAEEKLLESEGVD 1020

[Close]

BLAST of Carg22028 vs. TrEMBL
Match: tr|A0A1R3HTY7|A0A1R3HTY7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17148 PE=4 SV=1)

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 587/1074 (54.66%), Postives = 729/1074 (67.88%), Query Frame = 0


Query: 41   GVAEPVIVGGMVLDIHAIPSISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPFMISV 100
            G AEPV++GGMVLDI A  SI   PR+T PGK++Y+ GGVARN+AECM KLG++PFMIS 
Sbjct: 8    GEAEPVVIGGMVLDIQATSSIPPHPRTTCPGKVHYVRGGVARNIAECMWKLGADPFMISA 67

Query: 101  VGHDMAGNLLFENWRLAGLSTEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIEKFLT 160
            +G DMAGNLL E+W+ A L TEGIRKH+DI T  VC ++DV GE+AA VASVEA+E FLT
Sbjct: 68   LGFDMAGNLLLEHWKSAKLPTEGIRKHEDIKTPTVCHILDVTGEVAAGVASVEAVEMFLT 127

Query: 161  PDWIEKFKCNIRAAPVVMVDANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVASVAK 220
            P+WI+KFK  I +AP++MVDANL+P AL+ SCQIAAE D PVWFEPVSVAKS+R+  V K
Sbjct: 128  PEWIQKFKHKIHSAPILMVDANLSPPALEASCQIAAESDIPVWFEPVSVAKSKRIVPVVK 187

Query: 221  YISFTSPNEDELIAMANALSGQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKGIKVV 280
            YI+F SPNEDELIAMANALS  ++F PI+++     S ++ F++LK A+W+LLEKG+K++
Sbjct: 188  YITFASPNEDELIAMANALSSDNMFHPIEKNK---YSTDALFQKLKPAIWLLLEKGVKIL 247

Query: 281  ILTVGSRGVFVCSKGGPSFVKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETEKNSV 340
            +LT+GS GV +CSKG PS  + + ++   +G S QLF  + + CP N F  +   E+ S 
Sbjct: 248  VLTIGSDGVILCSKGEPSSWRIVPEKAKKHGFSGQLFEDVTSRCPSNQFPNAKILER-SH 307

Query: 341  LFAMHFPALPASVVRLTGCGDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETENNVPR 400
             +A+HFPALPASVVRLTG GDCLVGGMLAS CAGL++ QS AIGIAAAKA+VE ++NVP 
Sbjct: 308  FWAVHFPALPASVVRLTGAGDCLVGGMLASLCAGLDVMQSVAIGIAAAKASVEADSNVPS 367

Query: 401  EFHSNEIA-------------------VWQYIY-----------MQMRHLKHGLLCHVQA 460
            +F    IA                    W   Y           + MR+LK  L+ HVQA
Sbjct: 368  QFSLATIAGDARTVYSAARILSHQSKLQWALPYGLNFAKSPKCIVLMRYLKDSLVFHVQA 427

Query: 461  IKSG---DLVTYNSML-----SGYVSS--------------------------------- 520
            +K+G    ++TYN ++      G +                                   
Sbjct: 428  LKAGFTQSIITYNKLIHLHSKQGLIHEAQKLFDEMPEXXXXXXXXXXXXXXXXXXXXXXX 487

Query: 521  ------------------------DGYESQALGLFVEMQTA--PDMIRIDEFSLTIMLNL 580
                                     GYE+ AL LF +MQTA   D I+IDEF++T MLNL
Sbjct: 488  XXXXXXXXXXXXXXXXXXXXXXXXXGYETHALELFNDMQTARDDDNIKIDEFTVTTMLNL 547

Query: 581  TAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVS 640
            +AKL  LSYG QLH FM+KT N  + FA SSLIDMYSKCGCFK+A RV+   GE++DLVS
Sbjct: 548  SAKLSKLSYGTQLHCFMVKTGNAETGFAVSSLIDMYSKCGCFKQAFRVFKDGGELVDLVS 607

Query: 641  RNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADEN 700
            +NA                                                    M    
Sbjct: 608  KNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMGQNG 667

Query: 701  VRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAE 760
            +RWNEHTF SVLSACS LK+L  GKE+HA+VLKNGLI NP++ SG+VDVYCKC  M+YAE
Sbjct: 668  IRWNEHTFTSVLSACSILKNLNAGKEVHAWVLKNGLISNPYVSSGIVDVYCKCGKMKYAE 727

Query: 761  SVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEA 820
             +H      N +S+TSMIVGYSSQ NMVEAR+LFD L EKNSVVWTALF+ Y+KSQ  +A
Sbjct: 728  FMHQGSGRSNSFSVTSMIVGYSSQYNMVEARKLFDLLAEKNSVVWTALFSGYLKSQNCDA 787

Query: 821  VFELLSEY-RKEAAVPDVLILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLV 880
            VF+LL E+   EA +PD LIL++++GACA QAAL  GKQ HGYMLR GIE D KL S+++
Sbjct: 788  VFQLLGEFWDNEATIPDALILMNVLGACALQAALDQGKQTHGYMLRVGIEMDEKLFSAII 847

Query: 881  DMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAI 940
            DMYSKCG+I YAE++FR+   KDS++YN+ +AGYAHHG E++   LF+EM E  +KPD +
Sbjct: 848  DMYSKCGNISYAEKMFRKANVKDSVIYNVTMAGYAHHGHESKVFQLFEEMLEQGIKPDVV 907

Query: 941  TFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKR 1000
            TFIALLSACRH GLVELGE++FNSMT  Y I PE DHY CMIDLYGRAN+L+KA+AFMK 
Sbjct: 908  TFIALLSACRHCGLVELGEKYFNSMTESYKILPESDHYTCMIDLYGRANQLEKAVAFMKV 967

Query: 1001 IPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSARYVQLANVYAAEGNWEEM 1017
            IP++ DA I GAFLNACR+N N ELAREAE++LL IEG+N ARYVQLAN+YAAEGNWEEM
Sbjct: 968  IPVKKDAAIMGAFLNACRLNKNAELAREAEEKLLEIEGDNGARYVQLANIYAAEGNWEEM 1027

[Close]

BLAST of Carg22028 vs. TrEMBL
Match: tr|A0A061E1R3|A0A061E1R3_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_007296 PE=4 SV=1)

HSP 1 Score: 1072.0 bits (2771), Expect = 8.2e-310
Identity = 562/1022 (54.99%), Postives = 702/1022 (68.69%), Query Frame = 0


Query: 37   QLEIGVAEPVIVGGMVLDIHAIPSISAVPRSTTPGKINYILGGVARNVAECMSKLGSNPF 96
            Q + G AE VI+GGMVLDI A  SI   PR+T PGK++Y+ GGVARN+AECM KLG+ PF
Sbjct: 4    QRKDGEAEAVIIGGMVLDIQATSSIPPHPRTTCPGKVHYVQGGVARNIAECMWKLGAEPF 63

Query: 97   MISVVGHDMAGNLLFENWRLAGLSTEGIRKHQDISTAVVCAVVDVHGELAAAVASVEAIE 156
            MIS +G DMAGNLL E+W+ + L TEGIRKHQDI T  VC ++DV GE+AA VASVEA+E
Sbjct: 64   MISALGFDMAGNLLLEHWKSSKLPTEGIRKHQDIKTPTVCHILDVTGEVAAGVASVEAVE 123

Query: 157  KFLTPDWIEKFKCNIRAAPVVMVDANLNPHALKVSCQIAAEYDTPVWFEPVSVAKSRRVA 216
             FLTP+WI++FK  I +AP++MVDANL+P A++ SC+IAAE + PVWFEPVS+AKS+R+A
Sbjct: 124  MFLTPEWIQQFKQKIHSAPILMVDANLSPRAIEASCRIAAESNVPVWFEPVSIAKSKRIA 183

Query: 217  SVAKYISFTSPNEDELIAMANALSGQDLFSPIKRDNTITSSIESFFEQLKSAVWVLLEKG 276
            SV KYI+F SPNEDE+IAMANALS  ++F PI++      S ++ F+ LK A+W+LLEKG
Sbjct: 184  SVVKYITFASPNEDEVIAMANALSSDNMFRPIEKKK---CSTDTLFQMLKPAIWLLLEKG 243

Query: 277  IKVVILTVGSRGVFVCSKGGPSFVKKISKEINNYGSSSQLFRTLATSCPPNMFSVSPETE 336
            +K++++T+GS GV +C KG PS  +   ++  N+G S +LF T+  SCP + +S +   E
Sbjct: 244  VKILVVTIGSDGVILCFKGEPSSWRISPEKTKNHGFSGRLFETVTLSCPSSWYSDAKFLE 303

Query: 337  KNSVLFAMHFPALPASVVRLTGCGDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAVETEN 396
            ++     +H PALPASV+RLTG GDCLVGGMLAS CAGLN+ QS AIGIAAAKA+VE ++
Sbjct: 304  RSPYFLGVHLPALPASVIRLTGAGDCLVGGMLASLCAGLNVMQSVAIGIAAAKASVEVDS 363

Query: 397  NVPREFHSNEI---------AVWQYIYMQMRHLKHGLLCHVQAIKSG---DLVTYNSMLS 456
            NVP EF    I         A     +     LK GL+ HVQAIK+      +T N ++ 
Sbjct: 364  NVPSEFSLATIAGDARMVFSAAKVLPHQSKLSLKDGLILHVQAIKASFTPSTLTSNQLIH 423

Query: 457  GY---------------------------------------------------------- 516
             Y                                                          
Sbjct: 424  LYSKHGLIHEAQKLFDEMPERNVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 483

Query: 517  ----VSSDGYESQALGLFVEMQTA-PDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFML 576
                    G E+ A+ LF +MQ A  D I+IDEF++T ML+L+AKL  LSYG QLH FM+
Sbjct: 484  XXXXXXXXGSETHAVKLFYDMQAACDDKIKIDEFTVTTMLSLSAKLTNLSYGAQLHCFMV 543

Query: 577  KTANDLSVFAASSLIDMYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAV 636
            KT N+ + FA SSLIDMYSKCGCFKEA +VY G G ++DLVS+NAMVAA CR GE+    
Sbjct: 544  KTGNNKTGFAVSSLIDMYSKCGCFKEAFQVYKGGGGLVDLVSKNAMVAAFCREGEMXXXX 603

Query: 637  DLFSRERDRNDVVAWNTMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSACSNL 696
                                                 M +  VRWNEHTF SVLSACS L
Sbjct: 604  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGENGVRWNEHTFTSVLSACSIL 663

Query: 697  KSLKLGKEIHAYVLKNGLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMI 756
            K+LK GKE+H +VLKNGL +NPF+ SG+VDVYCKC  M+YAE +H      N +S+TSMI
Sbjct: 664  KNLKAGKEVHGWVLKNGLSLNPFVSSGIVDVYCKCGQMKYAELMHLGSGRSNTFSVTSMI 723

Query: 757  VGYSSQGNMVEARRLFDSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEY-RKEAAVPDV 816
            VGYSSQGNMVEARRLFDS DEKNSVVWTALF+ Y+KSQ  +AVF+LL E+  KEA +PD 
Sbjct: 724  VGYSSQGNMVEARRLFDSFDEKNSVVWTALFSGYLKSQNCDAVFQLLGEFWEKEATIPDG 783

Query: 817  LILVSIIGACARQAALAPGKQIHGYMLRAGIEFDVKLASSLVDMYSKCGSIIYAERIFRE 876
            LIL+ ++GA A QAAL PGKQ HGY+LR GIE D KL S+++DMYSKCG I YA ++F++
Sbjct: 784  LILMCVLGASALQAALDPGKQTHGYILRVGIEMDEKLFSAIIDMYSKCGHIAYAGKMFQK 843

Query: 877  VLDKDSILYNIMIAGYAHHGWENEAVHLFKEMTENDLKPDAITFIALLSACRHSGLVELG 936
            V  KDS++YN+M+AGYAHHG E++   LF+EM +  ++PD +TF+ALLSACRH G  ELG
Sbjct: 844  VNFKDSVIYNVMMAGYAHHGHESKVFQLFEEMLQQGIRPDVVTFVALLSACRHCGSAELG 903

Query: 937  ERFFNSMTNDYNISPEIDHYACMIDLYGRANELDKALAFMKRIPIELDAVIWGAFLNACR 983
            E++FNSMT  Y I PEIDHYACMIDLYGRAN+L+KA+ FMK IP+E DA I GAFLNACR
Sbjct: 904  EKYFNSMTESYKILPEIDHYACMIDLYGRANQLEKAVEFMKVIPVEQDAAIMGAFLNACR 963

[Close]

BLAST of Carg22028 vs. TrEMBL
Match: tr|A0A1S4DWI0|A0A1S4DWI0_CUCME (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18840 OS=Cucumis melo OX=3656 GN=LOC107990873 PE=4 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 1.9e-290
Identity = 515/672 (76.64%), Postives = 552/672 (82.14%), Query Frame = 0


Query: 417  MRHLKHGLLCHVQAIKSG---DLVTYNSMLSGYVS------------------------- 476
            M+HLKHGLLCHVQ IKSG    + T N +++ Y                           
Sbjct: 1    MKHLKHGLLCHVQGIKSGFTPTIFTSNQLINFYAKHGLLNDAQKLFDEMPERXXXXXXXX 60

Query: 477  -------------------------------------SDGYESQALGLFVEMQTAPDMIR 536
                                                    YE +ALG F+EMQTAPDMIR
Sbjct: 61   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEGKALGFFMEMQTAPDMIR 120

Query: 537  IDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLIDMYSKCGCFKEACRV 596
            IDEFSL IMLNLTAKLCV+SYGKQLH+FMLKTANDLSVFAASSLIDMYSKCG FKEACRV
Sbjct: 121  IDEFSLIIMLNLTAKLCVISYGKQLHSFMLKTANDLSVFAASSLIDMYSKCGFFKEACRV 180

Query: 597  YDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWNTMISGFVQNGYDEE 656
            Y GCGEV+D VSRNAMVAACCR GEID+A+DLF +E ++NDVVAWNTMISGFVQNGY+EE
Sbjct: 181  YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 240

Query: 657  SLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKNGLIVNPFIGSGLVD 716
            SLKLFV MADE V WNEHTFASVLSACSNL+SLKLGKE+H YVLKN LI NPFI SGLVD
Sbjct: 241  SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHTYVLKNRLIANPFICSGLVD 300

Query: 717  VYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLFDSLDEKNSVVWTAL 776
            VYCKCNNMRYAESVHSEL  +NVYSITSMIVGYSSQGNM EAR+LFDSLDEKNSVVWTAL
Sbjct: 301  VYCKCNNMRYAESVHSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTAL 360

Query: 777  FTEYVKSQQFEAVFELLSEYRKEAAVPDVLILVSIIGACARQAALAPGKQIHGYMLRAGI 836
            F  YVK QQ EAVFELLSEYRKEA VPDVLIL+SIIGACA QAALAPGKQIH YMLRAGI
Sbjct: 361  FFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALAPGKQIHSYMLRAGI 420

Query: 837  EFDVKLASSLVDMYSKCGSIIYAERIFREVLDKDSILYNIMIAGYAHHGWENEAVHLFKE 896
            + D KL SSLVDMYSKCGSIIYAERIF    DKDSI+YNIMIAGYAHHGWENEAV LF+E
Sbjct: 421  KLDTKLTSSLVDMYSKCGSIIYAERIFXRSSDKDSIIYNIMIAGYAHHGWENEAVQLFEE 480

Query: 897  MTENDLKPDAITFIALLSACRHSGLVELGERFFNSMTNDYNISPEIDHYACMIDLYGRAN 956
            M ENDLKPDAITF+ALLSACRH GLVELGE FF+SM+NDYNI+PEIDHYACMIDLYGRAN
Sbjct: 481  MVENDLKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNINPEIDHYACMIDLYGRAN 540

Query: 957  ELDKALAFMKRIPIELDAVIWGAFLNACRINGNTELAREAEDELLMIEGENSARYVQLAN 1016
            +LDKAL FM++IPI+LDAVIWGAFLNACRINGN ELAREAEDELL+IEGEN ARYVQLAN
Sbjct: 541  QLDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELAREAEDELLVIEGENGARYVQLAN 600

Query: 1017 VYAAEGNWEEMGRIRKKMKGKDVKKNAGFSWVFVENKFHVFISGDRFHLQNEAIYSTLAS 1024
            VYAAEGNWEEMGRIRKKMKGK+VKKNAG SWVFVE+KFHVFISGDRFH +NEAIYSTLAS
Sbjct: 601  VYAAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLAS 660

[Close]

BLAST of Carg22028 vs. TrEMBL
Match: tr|A0A1Q3C980|A0A1Q3C980_CEPFO (PfkB domain-containing protein/PPR domain-containing protein/PPR_2 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20260 PE=4 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 1.0e-288
Identity = 524/943 (55.57%), Postives = 656/943 (69.57%), Query Frame = 0


Query: 33  NSGNQLEIGVAEPVIVGGMVLDIHAIPSISAVPRSTTPGKINYILGGVARNVAECMSKLG 92
           + G QL+  + EPV++GGMVLDIHA PSI A PR+TTPG+INY LGGVARNVAECMSKLG
Sbjct: 38  SKGRQLKQEMGEPVVIGGMVLDIHATPSIPANPRTTTPGRINYALGGVARNVAECMSKLG 97

Query: 93  SNPFMISVVGHDMAGNLLFENWRLAGLSTEGIRKHQDISTAVVCAVVDVHGELAAAVASV 152
           + P+MIS +G DMAGNLL E+W+ AGL TEGIRKHQ I T V+C ++DV+GE+AA VA V
Sbjct: 98  TKPYMISALGLDMAGNLLLEHWKSAGLPTEGIRKHQYIETPVICNILDVNGEVAAGVAGV 157

Query: 153 EAIEKFLTPDWIEKFKCNIRAAPVVMVDANLNPHALKVSCQIAAEYDTPVWFEPVSVAKS 212
           EAIE FLTP+WI++FKC I ++ ++MVDANLNP AL+VSC++AAE +TPVWFEPVSVAKS
Sbjct: 158 EAIETFLTPEWIQQFKCKISSSSILMVDANLNPPALEVSCKMAAESNTPVWFEPVSVAKS 217

Query: 213 RRVASVAKYISFTSPNEDELIAMANALSGQDLFSPIKRDNTITSSIESFFEQLKSAVWVL 272
           RR+ASVAKYI+  SPNEDEL+AMAN LSG D+F PI+R++   +S E  F+ LK A+WVL
Sbjct: 218 RRIASVAKYITLASPNEDELVAMANTLSGGDIFHPIERNDGRDNSSEFLFQMLKPAIWVL 277

Query: 273 LEKGIKVVILTVGSRGVFVCSKGGPSFVKKISKEINNYGSSSQLFRTLATSCPPNMFSVS 332
           LEKGIK VI+T+GS GVF+CSKGG SF +    +    G S QL+  + +SCPPN FS  
Sbjct: 278 LEKGIKTVIVTLGSDGVFLCSKGGSSFKRSGLGQFKPTGFSRQLYEIMISSCPPNWFSGP 337

Query: 333 PETEKNSVLFAMHFPALPASVVRLTGCGDCLVGGMLASFCAGLNIYQSTAIGIAAAKAAV 392
            +++++S LFA+H PALPASVVRL G GDCLVGG +AS CAGL++ +S A+GIAAAKAAV
Sbjct: 338 MKSQRSSHLFAVHLPALPASVVRLIGAGDCLVGGTIASICAGLDVMRSVAVGIAAAKAAV 397

Query: 393 ETENNVPREFHSNEIAVWQYI--------------------------------------- 452
           E++ NVP EF    IA  Q                                         
Sbjct: 398 ESKTNVPPEFRLATIAEDQESPINSSITLKVKVTVLSRPLLNLLLLSLVAPSQFALSLVQ 457

Query: 453 -----------YMQMRHLKHGLLCHVQAIKSG---DLVTYNSMLSGY------------- 512
                      +  +R L+ GL+  VQ++K+G    ++T N ++  Y             
Sbjct: 458 FRIVMNFSESPFSSIRSLRDGLIYQVQSLKAGFTPTILTSNQLIHLYSKHGLLHEAHKLF 517

Query: 513 -------------------------------------------------VSSDGYESQAL 572
                                                                GYE+ AL
Sbjct: 518 DEMPLRNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYETHAL 577

Query: 573 GLFVEMQTAPDMIRIDEFSLTIMLNLTAKLCVLSYGKQLHTFMLKTANDLSVFAASSLID 632
            LFVEMQ   D IRIDEF+ T +LNL AKL + SYG+QLH FM+KTANDLS F+ SSL+D
Sbjct: 578 SLFVEMQKEHDHIRIDEFTATTILNLFAKLSMESYGRQLHAFMVKTANDLSGFSVSSLVD 637

Query: 633 MYSKCGCFKEACRVYDGCGEVIDLVSRNAMVAACCRAGEIDLAVDLFSRERDRNDVVAWN 692
           MYSKCGCFKEA  V+ GCG V+D V +NAMVAACCR GE+++A+DLF RE + ND  +WN
Sbjct: 638 MYSKCGCFKEAHNVFSGCGGVVDSVLKNAMVAACCREGEMEMALDLFWREPELNDAFSWN 697

Query: 693 TMISGFVQNGYDEESLKLFVNMADENVRWNEHTFASVLSACSNLKSLKLGKEIHAYVLKN 752
           T+ISG+  NGY E++L LFV+MA   VRWNE TFASVL+ACS LKS K+GKE+H +VLKN
Sbjct: 698 TLISGYAHNGYQEKALNLFVSMAKNGVRWNEQTFASVLNACSGLKSWKIGKEVHGWVLKN 757

Query: 753 GLIVNPFIGSGLVDVYCKCNNMRYAESVHSELTTRNVYSITSMIVGYSSQGNMVEARRLF 812
           G+  NPFI SG++DVYCKC NM+YAE +H     RN +SI S+IVG++SQGNM EAR+LF
Sbjct: 758 GMSSNPFISSGILDVYCKCGNMKYAELMHFACEIRNSFSICSLIVGHASQGNMAEARQLF 817

Query: 813 DSLDEKNSVVWTALFTEYVKSQQFEAVFELLSEYR-KEAAVPDVLILVSIIGACARQAAL 860
           ++L+EKNSVVWTALF+ YVK+QQ EAVFELL+EYR KEA  PD LIL+S++GACA QAAL
Sbjct: 818 NTLEEKNSVVWTALFSGYVKAQQSEAVFELLNEYRTKEAMTPDSLILISVLGACAIQAAL 877

The following BLAST results are available for this feature:

BLAST of Carg22028 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511614.1	0.0e+00	89.92	putative pentatricopeptide repeat-containing protein At3g18840 [Cucurbita pepo s...	[more]
XP_022953024.1	0.0e+00	89.81	putative pentatricopeptide repeat-containing protein At3g18840 [Cucurbita moscha...	[more]
XP_022972403.1	0.0e+00	89.80	putative pentatricopeptide repeat-containing protein At3g18840 [Cucurbita maxima...	[more]
XP_011659068.1	0.0e+00	78.34	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
XP_018836916.1	0.0e+00	58.41	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]

BLAST of Carg22028 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18840.2	4.6e-157	45.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G49350.1	4.0e-100	51.53	pfkB-like carbohydrate kinase family protein	[more]
AT3G02330.1	9.4e-94	33.28	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33170.1	8.3e-90	33.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G23330.1	2.4e-89	32.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg22028 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LHN5\|PP242_ARATH	8.3e-156	45.55	Putative pentatricopeptide repeat-containing protein At3g18840 OS=Arabidopsis th...	[more]
sp\|Q9FWA6\|PP207_ARATH	1.7e-92	33.28	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]
sp\|Q9SMZ2\|PP347_ARATH	1.5e-88	33.45	Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LW63\|PP251_ARATH	4.3e-88	32.07	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
sp\|Q0WSH6\|PP312_ARATH	1.5e-85	30.27	Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg22028 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4FZ41\|A0A2I4FZ41_9ROSI	0.0e+00	58.41	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18...	[more]
tr\|A0A1R3HTY7\|A0A1R3HTY7_COCAP	0.0e+00	54.66	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17148 PE=4 ...	[more]
tr\|A0A061E1R3\|A0A061E1R3_THECC	8.2e-310	54.99	Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=...	[more]
tr\|A0A1S4DWI0\|A0A1S4DWI0_CUCME	1.9e-290	76.64	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18...	[more]
tr\|A0A1Q3C980\|A0A1Q3C980_CEPFO	1.0e-288	55.57	PfkB domain-containing protein/PPR domain-containing protein/PPR_2 domain-contai...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016773	phosphotransferase activity, alcohol group as acceptor
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR029056	Ribokinase-like
IPR002173	Carboh/pur_kinase_PfkB_CS
IPR011611	PfkB_dom
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22028-RA	Carg22028-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 649..673 e-value: 0.89 score: 9.9 coord: 513..533 e-value: 0.067 score: 13.4 coord: 678..704 e-value: 0.0062 score: 16.6 coord: 542..565 e-value: 0.007 score: 16.5 coord: 437..464 e-value: 0.11 score: 12.7 coord: 880..902 e-value: 0.29 score: 11.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 804..851 e-value: 6.7E-11 score: 42.1 coord: 572..619 e-value: 1.7E-10 score: 40.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 545..565 e-value: 0.0032 score: 15.5 coord: 574..607 e-value: 2.1E-4 score: 19.2 coord: 675..704 e-value: 0.0025 score: 15.8 coord: 808..841 e-value: 3.4E-8 score: 31.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 739..773 score: 6.555
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 805..839 score: 12.101
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 572..606 score: 10.26
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 908..938 score: 5.305
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 508..538 score: 6.38
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 774..804 score: 7.202
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 942..976 score: 7.574
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 607..641 score: 7.202
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 876..906 score: 6.456
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 642..672 score: 6.226
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 673..707 score: 8.769
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 840..870 score: 7.552
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..466 score: 8.835
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 540..570 score: 8.769
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 708..738 score: 5.119
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 870..992 e-value: 2.0E-12 score: 49.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 490..632 e-value: 4.4E-24 score: 86.8 coord: 633..755 e-value: 4.0E-18 score: 67.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 756..869 e-value: 8.3E-27 score: 96.5
IPR011611	Carbohydrate kinase PfkB	PFAM	PF00294	PfkB	coord: 49..305 e-value: 8.9E-23 score: 80.9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 611..688 coord: 431..604
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 688..1006
None	No IPR available	PANTHER	PTHR24015:SF714	SUBFAMILY NOT NAMED	coord: 611..688 coord: 431..604
None	No IPR available	PANTHER	PTHR24015:SF714	SUBFAMILY NOT NAMED	coord: 688..1006
None	No IPR available	CDD	cd01941	YeiC_kinase_like	coord: 44..375 e-value: 3.11249E-58 score: 201.773
IPR002173	Carbohydrate/puine kinase, PfkB, conserved site	PROSITE	PS00583	PFKB_KINASES_1	coord: 78..102
IPR029056	Ribokinase-like	SUPERFAMILY	SSF53613	Ribokinase-like	coord: 46..304 coord: 344..397

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22028	Cla015951	Watermelon (97103) v1	carwmB0198
Carg22028	Csa7G253760	Cucumber (Chinese Long) v2	carcuB0234
Carg22028	MELO3C012560	Melon (DHL92) v3.5.1	carmeB0214
Carg22028	ClCG02G005220	Watermelon (Charleston Gray)	carwcgB0203
Carg22028	CSPI07G11330	Wild cucumber (PI 183967)	carcpiB0240
Carg22028	Cucsa.240300	Cucumber (Gy14) v1	carcgyB0252
Carg22028	CmaCh19G006510	Cucurbita maxima (Rimu)	carcmaB0288
Carg22028	CmoCh19G006610	Cucurbita moschata (Rifu)	carcmoB0293
Carg22028	Lsi11G010720	Bottle gourd (USVL1VR-Ls)	carlsiB186
Carg22028	Cp4.1LG15g05270	Cucurbita pepo (Zucchini)	carcpeB0295
Carg22028	CsGy7G010670	Cucumber (Gy14) v2	carcgybB0223
Carg22028	MELO3C012560.2	Melon (DHL92) v3.6.1	carmedB0219
Carg22028	CsaV3_7G023290	Cucumber (Chinese Long) v3	carcucB0238
Carg22028	Cla97C02G032240	Watermelon (97103) v2	carwmbB0212
Carg22028	Bhi05G001060	Wax gourd	carwgoB0260

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22028	Cucurbita moschata (Rifu)	carcmoB0292
Carg22028	Cucurbita pepo (Zucchini)	carcpeB0296
Carg22028	Bottle gourd (USVL1VR-Ls)	carlsiB185