Carg21713 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21713
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Location	Cucurbita_argyrosperma_scaffold_132 : 311701 .. 322910 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTAGAAGAAGGAGGAGCAGCAGAAGCAGCGAATCACCGCGGCTGCCCTTCTCGTCTCTTCAGCGGAGGAAACTGTAAGCCATGGAAGACATAGAAGACTTGCTCATCGGCGGCGGCGGCGGTGGAGCTCCCCCTGGTTACCGACTTCCAATATCCGCAGTCGGTGTAAAGCCGAAGAAAAAGAATAAGCTGAAATCTAATCCTGATGCTGATGATTCCAGCAGCGGGCTTTTTCCAACCCAAAATCTACTTGCACCTAAGATTCCAGGCACTCAGGTCTCTCTCTTCATATCTTCTTCTATCGCCTTGAGTGTTTTTTGTTTGATGTTCGCATTTCTCTTGCGGATACTGATAACTTTATGCGTCGATGTATTTTGGCAGACAATTTATGTTAAAACCTTTGGATGTTCTCACAACCAGGTTTGTCCTTCACACCTCGCGTGTTAAATTGATTTCTATTGTTTCCTTGGCTTAAATGTATGGCTGAGTCTTTAATCCCGTTGGAGTTTGTTTATTGTATAGTAATCCAAATAGAGGATGATTGGTTATTAGTTTTTATCCTTGTAATTTGTTGTGACATGAAACTGGATTTTACTATTTCCACTGTGCATTCCATCATTGTTTCATCTTTTATGCGTTTTATCTAAGGCTTCCAGTTGTTGTAAATTGATTTTAGAGTAAAAGTTTTCAGTGCAATGTGATAAATGTAAAACTAGAACTTTTTGCGAGTAGATAAAATGCGTGACACAGACACATCATATATTAAATCTATTATTATATTTTCTTTTCCTAATAAAGATCGGAAAAAGCTATCAATGATCCTATTTTTCAAGAGGACTAGTCCTATTTAGAGGAGAAATATAAGCAATACTACAAGCTCAATGGAATAAAGTTGGAATCGTCAAATTATATTAATTTTTTGCTCGAGTGAGAATCTCCACACACTGCCTAGATGTTCATCATAGAAAGCTCTTTGACAGCATTAGAAGTGTAAAAGAAACAGCAGTGTCCAAGTGCATTATTCATGAGATATCTTTCTTTTCGTTCTTTATGGTCTGCAATGGAAAAAAGCTTGATGTGAGATAGGTATCACAAGTTTCTCCTGTTTTGGACGAACCCAAGAAATTCTTGTTGCAAAAGCACAAATATTTAATAGATGATTTATGTTCATGTTATCACTTTTATGTAGAATGCATCTGTCATGAGGGAGGAAAGATACTGATGAGGTCTTCTCTTGTATCATTGGTGATTAATTTTAAATAATTTAATGAAAGTTTGAGGTTAGTATTTTGGATTGGAGAAGAAACTTACCAAACCTGAATGTACTATGGATAAATGTGGTTATCTTATGTCGTGGTTGGGAGGAATGAAATAATTTTCAATAATAAACAACCTTCTTGGGCTGATAGTTTTTGAATCTCCAAGATTAAAGGCTTCATCATGATGTTCTCTCTCCAAGTATTTTGCTGTTCTTTTTTACAAGATATATGTTTAAATTGAGATGTTTTTAGTTTTCCATTTTAATTGTCTATTTATTTACTACTTTTCTTCTCTCAATGGTGCGTTCTGTGTCACCATTGCTAAAATAAAAAATGGATACAACTTTCATCATTGTTTTTTATTTCAACATCAGAGTGACAGTGAATATATGGCTGGTCAGCTTTCAGCATTTGGTTATTTGTTAAGCGAGAATCCTGAAGAGGCAGACTTGTGGCTCATAAATACGTATGATCTGTTCCTTCAAATGTTACCGTTTCTTATTTTGTCTTAATTTTATAGAAATGTTCAGTGAAAATTTCTTTCTTAGTTGCCAGAAAACATAAGTTGCCTGTGAATACTTTCTAATGGTTTTTTGTGCCTCTAATGTGCCTTGTTGGCCTTAAGTGTACCATTTGTCTCTGCATCATTTATTCAGTAAACTGTTCTCTTTCCCAGGTTGGTTATTACATCTTCTTAAGGGCATTAACCTTTAGCTAACCTACCTAGTGTCTTCTCTTCATTATTGTTCTTTGATGTAGATAGCTGTGCATATATGCGCTTTGACACAGATATATATTTTTGCATAGACAGTTATGAATTTTTTTCCCTTTCTCCACTTATAAAAGAGACAATATTTGGAATTCTGAACTAATAGCCGGATAACTATTTTTTCAGTTGCACAGTTAAATCCCCTAGTCAGTCTGCTATGGACACTCTAATAACAAAATGCAAAAATGCAAAGAAGCCTCTTGTGGTAGCTGGGTGTGTACCACAAGGTAGTCGAGATTTAAAGGAGCTAGAAGGGGTCAGTATAGTAGGAGTCCAGCAGATTGACCGTGTGGTAGAAGTTGTGGAAGAGACACTGAAGGGTCATGAAGTAAGGCTATTGAATCGCAAGACACTGCCAGCGCTTGACCTCCCAAAAGTGCGAATTGTTTCCTGTTCTAGCCTTTTGAGTCTTCTATTTGAGTTTGATTTAAGAAGCTTCTTTAACATACATTATCTTTGTCTTACCCTTTCTCTAACTATTAAAGAAGTTTATTTTGATTTTGAATTTTGAACAGGTGAGAAAGAACAAGTTCATCGAAATACTACCAATCAATGTTGGCTGTTTAGGTGCTTGCACTTATTGCAAGACAAAACATGCTCGTGGTCACTTGGGAAGTTACACAGTAGATAGCCTTGTAAGAACTTTAAACTAATGTATGGTTTTTGTTAAACATATGTCCCTTTTTTTTCAGTTAGAAACTTAATGTTGTTCGATCTGAAGAAACATCTGATAAAACTGTATTTGCAGGTAAATCGTGTAAGAACTGTCATCAATGAAGGAGTCCGGGAAATATGGTTGAGCAGTGAAGATACTGGGGCATATGGTACTTTACTCTACTTCCATATAAATATATATAGTGTTGATTGATTTATTTTATCAGAAGAGAACATTGAATCCATAGAAATATATAGAGTAGGATTTTCAAAAAATGTCAATATCAATTAAGATTTATGGCCCAAAACCATCAAAATTTTGAATGAAACTTATATTCTTCATCACTATGGACATCTCAATCTTTCCAATTATCATTTTTTAATGGATATGCATTATAAAAAATAGTTTAAAATTTTTTGAGGAATTAATTGCTTGCTTTTATTGTTGAGGAATATTCTCTCTTGGGGTCGAGGGGACCAATTATGGTTCTTTTTATGAAAATTAAAGTGTGCTCTCTCCCTCCCTCACTCACCTCCTTGTGGGGTTGGTGGACCAATTATGTTTCTTTCCTCCTCTCTCTTTCGGGAGACGTCTCTTTCTTTATTCTTAGGTTGCTATACTTGAATCGATGATGATTTCGTAAGCTTCTTTCAATGCTGATTCTCTCCCTCTCTCCCCCAATCCACCACCTGACCCCCATCAAAAACCATGGCCAAACTCACACCACCCGTCCCTGACCATGGCAATAGACCCACCATTGTAGAAGAAAATTGTTACTATCAAAAGGAAGAAGTACTCTTAGAGTTAGACAATAGATATCAAACGAATAGAGTAAAGGTCTCAGAATTTACGCAAGAAAGGCTTTCTTCATACCTTTACATTGGGAACCTTTGAAATGGTTGTTACTATCACACATACGTGTGCTCCTTTAAATGGGAAGTTCTTTAGGGAAGAGTGGTTTACCCAATGGGTTATCTGAGTTGAAAAAATTGCAAACAAGAAAGATACTCTTGTCGAGGTTGTCCTTCTACATACCAAGGAGGGTTAAACAAACTCTTTGTACCTATTGATGCAGAATGAAAAGGCTGGGATGTTTTTTATAATCTCATAGCTAACTACCCTGCCCTACCATTAAAGGTGGTTTACCAACCTAAAATCCTTCATTCTTCAACAAGACTACTAATGAACCTGCTCTTAAACCCTTTTACCTACCAAAGACTACTAATGAACCTACTCTTAAACCCTTTTACCTACCGAAAATTCTTCCCCCGCTCCACTGTCATTAAATGGTAGTCTTGTTGAAGGGGATTGAGGGTTTAGGTTGGTCTTATTATTGGGATTTTGCTATGATGGTCACTAGAAGAAACTTTCATGATAGTTTGTACAAGATTTTTAATGGCCCTATTTTTCTTAATAAAATAGTGATGTGATATGCCTAATATGTGCAAAAATTCATTAGAACAATCACAAGTAAACGTTTCCATGGACTTAAACGTTTGCAAAATTCATTTAAAATGAAGGTAAAAGTGATGTTAACAATAATAACAGAAATCAAAATAGCAAGAAATTCAAATGAATGGAAACACCCTGATCTAATCTGAAGGCTACAATGTTAAATGTAAATGCGACTACCCTAACTTCATTCCCATGGCCTCCACAACTACGCTATCATTCGTACAAAGGTGCCTTACCTTTACCTGAGAAAGATGTAGCACATGACTTGAGTATTTATAGGAATACTCAGTAAGTAGCCTTATTGTTGAGGTCGTGAAATATAATCACATGTGATCATGTTGGGACCTATTTTTTCATAAAAACATCATGGTCTTGAACTCTACTTTTCAGTTCGGATGAAAGTGGATGTGTAGTATTTCTCCACACGGCCCACCACGCGCACATGGACCCTCCAAGCGGGCTTGTATACATACCTCTTGGGTTTGGCCTTTGACTAGCACACGCTCACTCTGTCGAAGCCACAAAGGAAAAATAGCTTGCATAATATCATGGGGTACATAAATATCGTAATGTACGCACTCATACAAATCATAACGGGGAAGCATCTTGATGCACGTGACATACAAAATGCATGAGGTTCCATAGTATCAAATCATGACATATACTTATCATGTAAGTTGTACCTCCATTCTTTTCATAACATAGCATTCTTATGAGACATGCAATGTATACTAAGCATATCTTTCATGGTTAACATATATGGTTTATCAATTTCTCGTAGGCATAGAGTGAACATGTTAACATAATATATGGTATGACATATGGAGGTTCATGCATCATATAATGTAATTAGGCAGAGTCAGTTGAGGGTTCAACAATCACAATGTGGATGAGTTGTCAAACTAAAAAGTCAAGGAAAAGCCAAGCAGTAACACTACAACTAAACCAGGAATCATGCCAAAGAGAGGTTGAGAGACCATTACCAAGACTTCTCTGAGCACGATTAGCTAGGTCAATAGATGAACAAATAAAACCAAGATACGAACTAAACCCCTCCAAATATGTCGAGACAAAAAACAATTGTTCTCTGAAGAATAATTATTTTGTTATTCTTCTTTCCCTTGCTTTTCAGTGCTTTTATTTGTATTTTAATATTTCAACAATAGGTTGGTCTAATGATCAAAACAAAAACTTTCCATTGAGATACAATCGAAGTCATATATAATCTTCAATATATCTCTAAGTCTAGATCTTGTATATTTGTTTGGGTGGTCGTTTGTAAGATTAGCAAAAACACGACATAGTGATCTATAGGTTGAAGAGAACCAATGATTGGTTTTGTATCATGAATACTATGATAATTTTCAATATTGGATACATTTTTTCTAATAATATGAAATTTGAACCTTGAAATAAGGCATACATATTATCCAAGGATCTCTAAGATCGTAAAATATTTGTCCTTGGCTATAAAGTATCATCACTTGTAAAAGGGCCAAGTATTGATGTCAGACTTATATCGCACTTCTGTCGACACATGTTTTTCTAATAATATGAAATTTGAACCTTGAAATAAGGCATGCTATTATTGTTTTTTATATTATTTTTCATTTTTTGGCATGGCAAGGACATGCTCGGACACAGCTAGGGACACACAAAGACACGGTTAAGACATGTAATGCCAATTTTTTTCAAGTTTCAAGTCTTTTAAGATCATTTAAAAGAAAGCCCACTCCGCATATAAACCTCAAAGTATTAGAGTTTCTTACCATCATCTTCCAACCTCAAATCTTGCATCCACGACATGAAAAAAAAGTCTTCACAACTGCTCATCAACGACAACAATGAATGACAGTTGTCGGTTGTCGTTGATCACTAGTGACCATTGGTGAAGAGGACAAGGATGGGGAAAATATGTAGTATGTAGAAGACTTGTTTTGTTTGATTCTATCTTGTAGTTTTCTGTGTAAGACTTGTTGAACATTGAATATTGTTGATGTTGAAGTTTTTTGTGTAAGACTTGTTGAATATTGGATATAGTTGATGTTTTTTGTTGATTGTTATCTTATCATTATCTTTTTAATGAATTTTATGGATGTTCTTTTGATGTTTAAATGTAGAACGTTACATTAGAAGTAAAAAATATTCATAACATGTCGAATTATACACATTTTAAAAAATAAAACAAATGTTTCCCCAATCTGTTGTGTCCTACTTTTTTGGAAATTGATGTGTCGCATGTTCATGTCAAGTTGTATCCACGTTACATGTTCTTTCCTGTGTTTTTTTTTTGTCCTTCCTAATATCATATGATGAAATTTCAGGCCGTGACATTGGGGTCAATCTTCCAATTTTGTTAAATGCAATTGTTGCCGAGCTTCCTCCTGATGCAAGCACAATGCTTCGGATTGGGATGACAAATCCTCCTTTCATTCTTGAGCATTTGAAAGAGATAGCTAATGTTTTGTGTCATCCATGTGTATACTCCTTTTTGCATGTGCCAGTTCAATCTGGGAGTGACACAATCTTAAGTGTAAGTATTGTCTATACCCAAATTTTCTTAGATTACTTGAGGCCAGTACAGTTTTAAGGAAGGAAATTACTTGTAGTCCTAATCATTACATTTTCTCTCAGGCAATGAATCGAGAATATACAGTCAGTGAGTTCAGGACTGTAGTAGATACCTTAACTGAGCTTGTTCCTGGGATGCAGGTCGCAACTGATATAATATGTGGATTTCCTGGTTAGTAAGTGGGTTTGAGGCGATTGATTGATCCCTATACTTCTATTGTTGTCTCTCTATTGGTTTGCATGGATTTTTATTCTTTGCATACTGTTTTGGATGGGAAATGAAACTTTCACCTTCATTGATTTCCTTGTTGCAAAACACCAACTGCTGAAACAGTGTAATCTATAAAATTATTGTTCTCCTCAAAGATGCAATATTTGATCTATTACTTACAAACATTTTAAAATATTGATTTTCATAATGGTCAACTATATTGATTATTATGAAAATGTAACCCTTTGGCCTTGTGGGATACCTCATCTCCCCCTCTTTTTGTAATAGTTCCTCTTGTTATTTTTACTGTCTCGTTTCCTTGTTCAATTTTTTTTTAATTTTTTATTATTATTATTATTTTTTTTTATCAAGAAAACAACTGAAAAATACTAAAGTTCAAGTATGAGTGGTTTGTTTTGGTCGCTATGCGGCAGTGTGAAGATTATTTCTGTTAGGTTTGTCAGGGCCTTTATCCCCCATTTTTTGCTTTGTATCATCTTGAATGTTTATCTCCTCCAATGTTGTATACAACATTAATTCGCATTTTTCCGAGCATAATATCTTAAAATTTTATTACATGTGAATGATTGCCGAACTTTTGTTAATTCTGTGGCTTTTCAGGGGAAACGGATGAAGATTTTTGTGAAACTATCAACCTTATTAAAGAGTACAAATTACCCCAAGTTCATATCTCACAGTTCTATCCTCGACCAGGTATGGCATCATGTTCAAGCCTCCTTATTTCTTTGCATAGACTTTAACTAAAGAAGGTAACAGTTAGACTTGAATGATAATGACTAGCTTAATAATCCTCTTATCTCAAATTAGTATGAACCTTGTGCTATTCCTTGTGTATTATTCAGGAGACACATCACATGCTTAAAATGTTTATTTCCCAGGATGTGGCAATAAGATTACCTAGGAAGCATCTATATATATATATATATATATTTGGTTAATCCAAACACTTTTATATCCCTTCTCATTTAGTTTTCTTGTTGTTGCTTGCAACTTATTAGGACCAAGGTTTTTTAATTTATTAATTTGTCTAATTTTTTTTTCTTAACATGACTGAGAAAAATAGAAGAAAGCAAAAGGGCATCAAAAAACAACCTAGAAAAAAATCCTGAAAAAAAAAAACCTAACTAAACATGAAGGGATTCAAACCAAAAGAATAAAGCCAAAGAGACATTGAACGAAGAATCACATTCGTTTTGTTTGGAAGGTTTTTTTTTTGTTAGGATGGTAGAAACAAAACATTTCTTTGTCTAATTTTAAAGAGCAACTGCTACTTATGGATCCCTCTATCATACAAACAACCTATTTTATACTTATTCAGATGAAACAGTGTGATACTAGCCTCAACAAATGATTGAATGACTGAGATGAATTATTCATGCATGTGCAAAATCCAGCAATCAAACTGTTTGCCCATGTTACCTTAGAAGAACCCTGGCTGTAGCAATTTCTTTCATTAAATTGATTGTCTTGGATTTATCTGGCTAGACTAGGTTTTGGAACTTCTTTGATTCCAAGTAAATAGAATGTGATTACTTAAAACTAATATTTCCAGCCGTCAACTATTTAAAATGAAAAAAACAGTATTCTTCCCTCTTGTCCTTCAGGGACACCTGCTGCTAGGATGAAGAAAGTTCCAAGTGCTATTGTCAAGAAACGAAGCCGTGAGTTGACTTCAGTTTTTGAAGCTTTTACTCCATATAATGGAGTGGAGGGCAGAGTGGAAAGAATTTGGATTACAGAAATTGCAGCTGATGGAATTCACTTGGTAAGAAAGCGATGCTGTCTAGTGTATTTGTTTCTAATTCTTCCATGTATTTGCCTACAGTTGTTTCAGGTGGCTGCTTCTACACAAAATAGTTAGGACAATGGTGAGAAAAACTGTTTGGATCAGTTTTAGGCCCAAATTTGAGACATCAAGGCTGTTTAATTGACCTTTTAGCTAGTGTAAATGAAATTGTGTTTACAGTAACACAAACAAGAAAAGGGAGAAAATAGGATTAAAAAAAAACTGGTAAAATTCACTGTTGACATATTGAGAATCCATATAAAATTTTAGACTCAGGCTGCATGCTTAACAAATTATAGAAAATATTTATTGGAAAGAGTAAAAAGAAAGATAGAAAATATCTACTGGCGGAGTTATCAATCAATAAACATTTTAATTCACCATGTTCTACACGAGGAAAAACCCAGCTGTACCATCTGTTGGCCTTTAAGTGAAATAGAATTAGATACCCTGACCAAAATTAGGATTTCAAGACATTAAGGACTTTTGCATTTCTACCTAGCATTTATAACTAAGTTATTTTTTCTTTTTAACAAGAAACAAAATATTTCATTGAATTAATTAAAAGAGTCTAGCAAATATCTTGACCATTGAGAAACCCTCCATCATTCCATCTCAAAACAATCAACCCAATATTTAAATATAAGTAGGCTCTATTAATCTTAGTTAATTTTAAACATTCTTCAAAAAAAGGATTTTCTTCAAACATGTCTTATTTGACGTTGCTTCTTTAGACAATATGTAATTGGCTTGTTCATGAGCGGAGTTAAATTTTATTCATTGTTTCATATACGTATATAAAATATACTATTTACATTAGCTTAGACCATTCCTAACCCAAGGCCTGGGCTGTGGAATGCCTGTTCTCTGTTCGCAGTTAAGACCATCCAAGTTAACACTATCTTGTGGTGAACTTGGATAGGAATAAATAGTAAACCTTTAGAAGGTAAGCTTAGATCGTGAGCTGAAGTATGGGCTGAAGTCTTTGGTTATGTTAAGTTTGTGATGTAGTAGATTAGCCGACTAGGGATAATCTTGTAATTTTTGGCTGAGCTTGTTAATTGTTAGTTGTTAGTTGGGTTTAGGTAAAGGGTTTTGGTAGTTGAATTAGTTTGTTAATTGATTGCTTTGTTTGTAACTGGGTTTTACTTAGCTTGTCAGTTGGCATCCAGAGGATAGTCTCTTGTAAAGACTTCGGAATAGTAATTAAAAAAAAAAAGGTTATCCTTGGGTTCTATTTTTTGGTTGCGAGGTTGCATCATTTTTTGTATAGTAACTTTTAGAAAAGGGCCAAATTCTCTCGGACAATTGATTGAAGAAAATGTTATTAGTTATGGATCTAGGTTTGGAGAGATCTTGGGAGGAAACTTGTGGTAGGCTAGAAAGGGACAACATAATTTTTAGCGAGCGGAGAGATTTTGAAGGAAGTTTGGGAGGTTGCTTGGTTTGCCTTCCCGTGGAAATCCTTCCATTGGAGTTTCTTTTATTGTTAGCTTTGTTTCATTCCTTTGAATTGGAATACCATCCTGTTGTTAATTGTTAACTGGTTCTTAATCAATTTCAATTCTCATATGCATTTTAGTGCATCATGGAAGGGAACTTCCTTTTCTGAGCCATCTCATAAAACTTCTGTTTTTATATGCTTTTGATCATCTAATGTTTCAAAGAACTGTTGTGTCTTTTTCGATAAAAGCTCAATTTATATTGCTCCCCCAGGTTGGCCATACCAAGGGATACATACAGGTGCTAGTAATTGGTCCTGAAGCTATGCTGGGAACTTCTGCTTTGGTGAAGATAACATCCGTTGGAAGATGGTCTGTTTTCGGGGAAGTGATTGAAACCATCGTCACCAAACATCATAAAACAACTGCTCTCGAAGACGTGCCGATTCAAGCCAAGGTTCCTCCCTGCTCTAATTCTCATGAAACATGTGCATGTTCTGTGGAACCCGAAGCTTGCGCTTGTGGAGCAGAAAGCTGCTGCAAAGGACCAGTTGCTTTGGATGAGAAAGATGATTCTTCAAGAAATATGCCATTGCCTGAAGAGCCCAAGCGGAAGAATCTGGTTGAGTGGCTGCTATTGCGGAAACGGAAGAGCCACGCGCCCAAAAGGGAGGAAAGGGAAAGTCCGGTAGTGTCCGAGAGAAAGCAGGCATCGGCTGGAGGAAGCATGAATGAGTGGGGCGTCGTCGATAGGATTCTTGTTGGAGGAATACTAATCAGTATCTTCACAATTGTTGGTCTGCTGTTTCATCTTGGATCCAGGACACTCTCCTCCAGTTGATGATATTAATGATATTATACAATGCTAATTTGTATTGAACCATATATTTAAGAAAGTTTGTAATGAGAGCTATAATCCATCATATCTTCATGTTCCTTTTTCAACTTTCATCTATGTAGATCGTGTTTTGACGGTCACAATTTCAGAAGTACATGGAATAATCGAATTAACCAATTTTGGAGGGATGATAATCTAAAG

mRNA sequence

GTAGTAGAAGAAGGAGGAGCAGCAGAAGCAGCGAATCACCGCGGCTGCCCTTCTCGTCTCTTCAGCGGAGGAAACTGTAAGCCATGGAAGACATAGAAGACTTGCTCATCGGCGGCGGCGGCGGTGGAGCTCCCCCTGGTTACCGACTTCCAATATCCGCAGTCGGTGTAAAGCCGAAGAAAAAGAATAAGCTGAAATCTAATCCTGATGCTGATGATTCCAGCAGCGGGCTTTTTCCAACCCAAAATCTACTTGCACCTAAGATTCCAGGCACTCAGACAATTTATGTTAAAACCTTTGGATGTTCTCACAACCAGAGTGACAGTGAATATATGGCTGGTCAGCTTTCAGCATTTGGTTATTTGTTAAGCGAGAATCCTGAAGAGGCAGACTTGTGGCTCATAAATACTTGCACAGTTAAATCCCCTAGTCAGTCTGCTATGGACACTCTAATAACAAAATGCAAAAATGCAAAGAAGCCTCTTGTGGTAGCTGGGTGTGTACCACAAGGTAGTCGAGATTTAAAGGAGCTAGAAGGGGTCAGTATAGTAGGAGTCCAGCAGATTGACCGTGTGGTAGAAGTTGTGGAAGAGACACTGAAGGGTCATGAAGTAAGGCTATTGAATCGCAAGACACTGCCAGCGCTTGACCTCCCAAAAGTGAGAAAGAACAAGTTCATCGAAATACTACCAATCAATGTTGGCTGTTTAGGTGCTTGCACTTATTGCAAGACAAAACATGCTCGTGGTCACTTGGGAAGTTACACAGTAGATAGCCTTGTAAATCGTGTAAGAACTGTCATCAATGAAGGAGTCCGGGAAATATGGTTGAGCAGTGAAGATACTGGGGCATATGGCCGTGACATTGGGGTCAATCTTCCAATTTTGTTAAATGCAATTGTTGCCGAGCTTCCTCCTGATGCAAGCACAATGCTTCGGATTGGGATGACAAATCCTCCTTTCATTCTTGAGCATTTGAAAGAGATAGCTAATGTTTTGTGTCATCCATGTGTATACTCCTTTTTGCATGTGCCAGTTCAATCTGGGAGTGACACAATCTTAAGTGCAATGAATCGAGAATATACAGTCAGTGAGTTCAGGACTGTAGTAGATACCTTAACTGAGCTTGTTCCTGGGATGCAGGTCGCAACTGATATAATATGTGGATTTCCTGGGGAAACGGATGAAGATTTTTGTGAAACTATCAACCTTATTAAAGAGTACAAATTACCCCAAGTTCATATCTCACAGTTCTATCCTCGACCAGGGACACCTGCTGCTAGGATGAAGAAAGTTCCAAGTGCTATTGTCAAGAAACGAAGCCGTGAGTTGACTTCAGTTTTTGAAGCTTTTACTCCATATAATGGAGTGGAGGGCAGAGTGGAAAGAATTTGGATTACAGAAATTGCAGCTGATGGAATTCACTTGGTTGGCCATACCAAGGGATACATACAGGTGCTAGTAATTGGTCCTGAAGCTATGCTGGGAACTTCTGCTTTGGTGAAGATAACATCCGTTGGAAGATGGTCTGTTTTCGGGGAAGTGATTGAAACCATCGTCACCAAACATCATAAAACAACTGCTCTCGAAGACGTGCCGATTCAAGCCAAGGTTCCTCCCTGCTCTAATTCTCATGAAACATGTGCATGTTCTGTGGAACCCGAAGCTTGCGCTTGTGGAGCAGAAAGCTGCTGCAAAGGACCAGTTGCTTTGGATGAGAAAGATGATTCTTCAAGAAATATGCCATTGCCTGAAGAGCCCAAGCGGAAGAATCTGGTTGAGTGGCTGCTATTGCGGAAACGGAAGAGCCACGCGCCCAAAAGGGAGGAAAGGGAAAGTCCGGTAGTGTCCGAGAGAAAGCAGGCATCGGCTGGAGGAAGCATGAATGAGTGGGGCGTCGTCGATAGGATTCTTGTTGGAGGAATACTAATCAGTATCTTCACAATTGTTGGTCTGCTGTTTCATCTTGGATCCAGGACACTCTCCTCCAGTTGATGATATTAATGATATTATACAATGCTAATTTGTATTGAACCATATATTTAAGAAAGTTTGTAATGAGAGCTATAATCCATCATATCTTCATGTTCCTTTTTCAACTTTCATCTATGTAGATCGTGTTTTGACGGTCACAATTTCAGAAGTACATGGAATAATCGAATTAACCAATTTTGGAGGGATGATAATCTAAAG

Coding sequence (CDS)

ATGGAAGACATAGAAGACTTGCTCATCGGCGGCGGCGGCGGTGGAGCTCCCCCTGGTTACCGACTTCCAATATCCGCAGTCGGTGTAAAGCCGAAGAAAAAGAATAAGCTGAAATCTAATCCTGATGCTGATGATTCCAGCAGCGGGCTTTTTCCAACCCAAAATCTACTTGCACCTAAGATTCCAGGCACTCAGACAATTTATGTTAAAACCTTTGGATGTTCTCACAACCAGAGTGACAGTGAATATATGGCTGGTCAGCTTTCAGCATTTGGTTATTTGTTAAGCGAGAATCCTGAAGAGGCAGACTTGTGGCTCATAAATACTTGCACAGTTAAATCCCCTAGTCAGTCTGCTATGGACACTCTAATAACAAAATGCAAAAATGCAAAGAAGCCTCTTGTGGTAGCTGGGTGTGTACCACAAGGTAGTCGAGATTTAAAGGAGCTAGAAGGGGTCAGTATAGTAGGAGTCCAGCAGATTGACCGTGTGGTAGAAGTTGTGGAAGAGACACTGAAGGGTCATGAAGTAAGGCTATTGAATCGCAAGACACTGCCAGCGCTTGACCTCCCAAAAGTGAGAAAGAACAAGTTCATCGAAATACTACCAATCAATGTTGGCTGTTTAGGTGCTTGCACTTATTGCAAGACAAAACATGCTCGTGGTCACTTGGGAAGTTACACAGTAGATAGCCTTGTAAATCGTGTAAGAACTGTCATCAATGAAGGAGTCCGGGAAATATGGTTGAGCAGTGAAGATACTGGGGCATATGGCCGTGACATTGGGGTCAATCTTCCAATTTTGTTAAATGCAATTGTTGCCGAGCTTCCTCCTGATGCAAGCACAATGCTTCGGATTGGGATGACAAATCCTCCTTTCATTCTTGAGCATTTGAAAGAGATAGCTAATGTTTTGTGTCATCCATGTGTATACTCCTTTTTGCATGTGCCAGTTCAATCTGGGAGTGACACAATCTTAAGTGCAATGAATCGAGAATATACAGTCAGTGAGTTCAGGACTGTAGTAGATACCTTAACTGAGCTTGTTCCTGGGATGCAGGTCGCAACTGATATAATATGTGGATTTCCTGGGGAAACGGATGAAGATTTTTGTGAAACTATCAACCTTATTAAAGAGTACAAATTACCCCAAGTTCATATCTCACAGTTCTATCCTCGACCAGGGACACCTGCTGCTAGGATGAAGAAAGTTCCAAGTGCTATTGTCAAGAAACGAAGCCGTGAGTTGACTTCAGTTTTTGAAGCTTTTACTCCATATAATGGAGTGGAGGGCAGAGTGGAAAGAATTTGGATTACAGAAATTGCAGCTGATGGAATTCACTTGGTTGGCCATACCAAGGGATACATACAGGTGCTAGTAATTGGTCCTGAAGCTATGCTGGGAACTTCTGCTTTGGTGAAGATAACATCCGTTGGAAGATGGTCTGTTTTCGGGGAAGTGATTGAAACCATCGTCACCAAACATCATAAAACAACTGCTCTCGAAGACGTGCCGATTCAAGCCAAGGTTCCTCCCTGCTCTAATTCTCATGAAACATGTGCATGTTCTGTGGAACCCGAAGCTTGCGCTTGTGGAGCAGAAAGCTGCTGCAAAGGACCAGTTGCTTTGGATGAGAAAGATGATTCTTCAAGAAATATGCCATTGCCTGAAGAGCCCAAGCGGAAGAATCTGGTTGAGTGGCTGCTATTGCGGAAACGGAAGAGCCACGCGCCCAAAAGGGAGGAAAGGGAAAGTCCGGTAGTGTCCGAGAGAAAGCAGGCATCGGCTGGAGGAAGCATGAATGAGTGGGGCGTCGTCGATAGGATTCTTGTTGGAGGAATACTAATCAGTATCTTCACAATTGTTGGTCTGCTGTTTCATCTTGGATCCAGGACACTCTCCTCCAGTTGA

Protein sequence

MEDIEDLLIGGGGGGAPPGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPKIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAMDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGRWSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETCACSVEPEACACGAESCCKGPVALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSMNEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS

Homology

[Close]

BLAST of Carg21713 vs. NCBI nr
Match: XP_023524910.1 (threonylcarbamoyladenosine tRNA methylthiotransferase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 615/636 (96.70%), Postives = 620/636 (97.48%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           MEDIEDLL          GYRLPISAVGVKPKKKNKLK NPDADDSSSGLFPTQNLLAPK
Sbjct: 1   MEDIEDLL--IGGGGAPPGYRLPISAVGVKPKKKNKLKPNPDADDSSSGLFPTQNLLAPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
           NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI
Sbjct: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
           NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE
Sbjct: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC
Sbjct: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF
Sbjct: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR
Sbjct: 421 EAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480

Query: 481 WSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGP 540
           WSVFGEVIETIVTKHHKTTALED+PIQAKVPPCSN+HET XXXXXXXXXXXXXX CCKGP
Sbjct: 481 WSVFGEVIETIVTKHHKTTALEDMPIQAKVPPCSNAHETCXXXXXXXXXXXXXXSCCKGP 540

Query: 541 VALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSM 600
           VALDEKDDSSRN+PLPEEPKRKNLVEW LLRKRKSH PKREERESPVVSERKQASAGGSM
Sbjct: 541 VALDEKDDSSRNIPLPEEPKRKNLVEW-LLRKRKSHVPKREERESPVVSERKQASAGGSM 600

Query: 601 NEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
           +EWGVVDRILVGGILISIFTIVGLLFHLGS TLSSS
Sbjct: 601 SEWGVVDRILVGGILISIFTIVGLLFHLGSTTLSSS 633

[Close]

BLAST of Carg21713 vs. NCBI nr
Match: XP_022949069.1 (threonylcarbamoyladenosine tRNA methylthiotransferase [Cucurbita moschata])

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 619/636 (97.33%), Postives = 625/636 (98.27%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK
Sbjct: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
           NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI
Sbjct: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
           NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE
Sbjct: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC
Sbjct: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF
Sbjct: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVIG E MLGTSALVKITSVGR
Sbjct: 421 EAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGHETMLGTSALVKITSVGR 480

Query: 481 WSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGP 540
           WSVFGEVIETIVTKHHKTTALED+PIQAKVPPCS++HE XXXXXXXXXXXXXXXX     
Sbjct: 481 WSVFGEVIETIVTKHHKTTALEDMPIQAKVPPCSDAHEXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 VALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSM 600
            ALDEKDDSSRN+PLPEEPKRKNLVEW LLRKRKSHAPKREERESPVVSERKQASAGGSM
Sbjct: 541 XALDEKDDSSRNIPLPEEPKRKNLVEW-LLRKRKSHAPKREERESPVVSERKQASAGGSM 600

Query: 601 NEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
           +EWGVVDRILVGGILISIFTIVGLLFHLGS TLSSS
Sbjct: 601 DEWGVVDRILVGGILISIFTIVGLLFHLGSTTLSSS 635

[Close]

BLAST of Carg21713 vs. NCBI nr
Match: XP_022997808.1 (threonylcarbamoyladenosine tRNA methylthiotransferase [Cucurbita maxima])

HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 607/637 (95.29%), Postives = 611/637 (95.92%), Query Frame = 0


Query: 1   MEDIEDL-LXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAP 60
           MEDIEDL  XXXXXXXXXXGYRLPISAVGVK KK        DADDSSSGLFPTQNLLAP
Sbjct: 1   MEDIEDLXXXXXXXXXXXXGYRLPISAVGVKSKKXXXXXXXXDADDSSSGLFPTQNLLAP 60

Query: 61  KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSA 120
           KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSA
Sbjct: 61  KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSA 120

Query: 121 MDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRL 180
           MDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRL
Sbjct: 121 MDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRL 180

Query: 181 LNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTV 240
           LNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTV
Sbjct: 181 LNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTV 240

Query: 241 INEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLK 300
           INEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLK
Sbjct: 241 INEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLK 300

Query: 301 EIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDII 360
           EIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDII
Sbjct: 301 EIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDII 360

Query: 361 CGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSV 420
           CGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSV
Sbjct: 361 CGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSV 420

Query: 421 FEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVG 480
           FEAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVIG EAMLGTSALVKITSVG
Sbjct: 421 FEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGHEAMLGTSALVKITSVG 480

Query: 481 RWSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKG 540
           RWSVFGEVIETIVTKHHKTTALED+PIQAKVPPCSNSH  XXXXXXXXXXXXXXXX    
Sbjct: 481 RWSVFGEVIETIVTKHHKTTALEDMPIQAKVPPCSNSHXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 PVALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGS 600
              LDEKDDSSRN+PLPEEPKRKNLVEW LLRKRKSH PKREE ESPVVS RKQASAGGS
Sbjct: 541 XXXLDEKDDSSRNIPLPEEPKRKNLVEW-LLRKRKSHVPKREEGESPVVSGRKQASAGGS 600

Query: 601 MNEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
           M+EWGVVDRILVGGILISIFTIVGLLFHLGS TLSSS
Sbjct: 601 MSEWGVVDRILVGGILISIFTIVGLLFHLGSTTLSSS 636

[Close]

BLAST of Carg21713 vs. NCBI nr
Match: XP_008459673.1 (PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 [Cucumis melo])

HSP 1 Score: 1069.3 bits (2764), Expect = 5.0e-309
Identity = 558/636 (87.74%), Postives = 584/636 (91.82%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           MEDIEDLL          GYRLPI+AVGVKPKKKN  KSNP ADDSS+   PTQN L PK
Sbjct: 1   MEDIEDLL--IGGGGAPPGYRLPITAVGVKPKKKNLFKSNPSADDSSNQPSPTQNPLVPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLS+NPE+ADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
           NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV RVR+VI
Sbjct: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVKRVRSVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
           NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE
Sbjct: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IA VL HPCVYSFLHVPVQSGSD ILSAMNREYTVSEFRTVVDTLTELVPGMQ+ATDIIC
Sbjct: 301 IAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGETDEDFCETINLIKEY LPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF
Sbjct: 361 GFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVI PE MLGTSA+ KITS+GR
Sbjct: 421 EAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSAMAKITSIGR 480

Query: 481 WSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGP 540
           WSVFGEVIETI TKHHKTT LED   + KV PCSN+HET XXXXXXXXXXXXXX  CKG 
Sbjct: 481 WSVFGEVIETISTKHHKTT-LEDTLTRDKVSPCSNTHET-XXXXXXXXXXXXXXGSCKGA 540

Query: 541 VALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSM 600
           V++ ++ DSSRN+PLPEEPKRKNL+EW+L R++    PKREE E+P+V+ERKQ  AGG +
Sbjct: 541 VSVGDEVDSSRNIPLPEEPKRKNLIEWVLRRRKSQVMPKREETENPIVTERKQTLAGGRL 600

Query: 601 NEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
           +EWGVVD ILVGGILIS FTI GLLFH+GS TLSSS
Sbjct: 601 DEWGVVDMILVGGILISTFTIFGLLFHVGSTTLSSS 632

[Close]

BLAST of Carg21713 vs. NCBI nr
Match: XP_022155234.1 (threonylcarbamoyladenosine tRNA methylthiotransferase [Momordica charantia])

HSP 1 Score: 1061.6 bits (2744), Expect = 1.0e-306
Identity = 554/635 (87.24%), Postives = 577/635 (90.87%), Query Frame = 0


Query: 1   MEDIEDL-LXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAP 60
           MEDIEDL  XXXXXXXXXXGYRLP++AVG+KPKKKNKLKSNPDADDSS+ L PTQN L P
Sbjct: 4   MEDIEDLXXXXXXXXXXXXGYRLPLTAVGLKPKKKNKLKSNPDADDSSNQLSPTQNPLVP 63

Query: 61  KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSA 120
           KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLS+NPEEADLWLINTCTVKSPSQSA
Sbjct: 64  KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEEADLWLINTCTVKSPSQSA 123

Query: 121 MDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRL 180
           MDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRL
Sbjct: 124 MDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRL 183

Query: 181 LNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTV 240
           LNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV RVRTV
Sbjct: 184 LNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVKRVRTV 243

Query: 241 INEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLK 300
           INEGV+E+WLSSEDTGAYGRDIGVNLP LLNAIVAELPPDASTMLRIGMTNPPFILEHLK
Sbjct: 244 INEGVKEVWLSSEDTGAYGRDIGVNLPSLLNAIVAELPPDASTMLRIGMTNPPFILEHLK 303

Query: 301 EIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDII 360
           EIANVLCHPCVYSFLHVPVQSGSD ILSAMNREYTV EFRTVVDTLTELVPGMQ+ATDII
Sbjct: 304 EIANVLCHPCVYSFLHVPVQSGSDAILSAMNREYTVDEFRTVVDTLTELVPGMQIATDII 363

Query: 361 CGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSV 420
           CGFPGETDEDFC+TINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSV
Sbjct: 364 CGFPGETDEDFCQTINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSV 423

Query: 421 FEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVG 480
           FEAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVI PE MLGTSA+VK+TSVG
Sbjct: 424 FEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSAMVKVTSVG 483

Query: 481 RWSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKG 540
           RWSVFG+VIETI T+HHKTT LE++PIQ KV PC N+HE                  CK 
Sbjct: 484 RWSVFGDVIETISTRHHKTTTLEEMPIQDKV-PCCNTHE-KCSSSTEPEPCACGPESCKA 543

Query: 541 PVALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESP-VVSERKQASAGG 600
           PV LD KDDSS N+ L EEPKRKN++EW L R+RK H  KREERES  + SERKQAS   
Sbjct: 544 PVTLDNKDDSSSNISLAEEPKRKNVIEW-LPRRRKRHVAKREERESSGIASERKQAS--- 603

Query: 601 SMNEWGVVDRILVGGILISIFTIVGLLFHLGSRTL 634
              EWG VDRILVGGILISIF IVG+LFHLGS TL
Sbjct: 604 --GEWGFVDRILVGGILISIFAIVGVLFHLGSTTL 630

[Close]

BLAST of Carg21713 vs. TAIR10
Match: AT1G72090.1 (Methylthiotransferase)

HSP 1 Score: 818.9 bits (2114), Expect = 2.1e-237
Identity = 449/640 (70.16%), Postives = 507/640 (79.22%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPK--KKNKLKSNPDADDSSSGLFPTQNLLA 60
           MEDIEDLL          G+RLP++AVG+ PK  K  ++ S PD   +S+     ++ LA
Sbjct: 1   MEDIEDLL-AGGVGGAPPGFRLPLNAVGINPKTNKSKRISSKPDQITASN-----RDSLA 60

Query: 61  P---KIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSP 120
           P   KIPGTQTIY+KTFGCSHNQSDSEYMAGQLSAFGY L+E PEEADLWLINTCTVKSP
Sbjct: 61  PPSMKIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALTEVPEEADLWLINTCTVKSP 120

Query: 121 SQSAMDTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGH 180
           SQSAM TLIT+ ++ KKPLV+AGCVPQGSRDLKELEGVS+VGVQQIDRVVE+VEETLKGH
Sbjct: 121 SQSAMSTLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGH 180

Query: 181 EVRLLNRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNR 240
           EVRLL RKTLPALDLPKVR+N FIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV R
Sbjct: 181 EVRLLTRKTLPALDLPKVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVER 240

Query: 241 VRTVINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFIL 300
           VRTVI+EGV+EIWLSSEDTGAYGRDIGVNLPILLNAIV ELP D STMLRIGMTNPPFIL
Sbjct: 241 VRTVISEGVKEIWLSSEDTGAYGRDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFIL 300

Query: 301 EHLKEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVA 360
           EHLKEIA VL HPCVY+FLHVPVQSGSD++L+AMNREYT SEFRTVVDTLTELVPGMQ+A
Sbjct: 301 EHLKEIAAVLRHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIA 360

Query: 361 TDIICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRE 420
           TDIICGFPGETDEDF +T+ LIK+YK PQVHISQFYPRPGTPAA+MKKV S IVK+RSRE
Sbjct: 361 TDIICGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKVQSKIVKQRSRE 420

Query: 421 LTSVFEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKI 480
           LTSVFEAF PY G+E R ERIWITE+A DGIHLVGHTKGY+QVLV GPE+MLGTSA+ +I
Sbjct: 421 LTSVFEAFAPYTGMECREERIWITEVATDGIHLVGHTKGYVQVLVTGPESMLGTSAMARI 480

Query: 481 TSVGRWSVFGEVIETIVTKHHKTTALED--VPIQAKVPPCSNSHETXXXXXXXXXXXXXX 540
           TSVGRWSVFGEVIET  + + +T + E+  +P  + V  C    ET XXXXXXXXXXXXX
Sbjct: 481 TSVGRWSVFGEVIETFSSANRETKSREETKLPCSSNVSTC----ETCXXXXXXXXXXXXX 540

Query: 541 XXCCKGPVALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQ 600
           X C           + S N+   ++ K K+               K+EE+E   V     
Sbjct: 541 XAC-----------NISGNISGQDDNKGKS---------------KKEEKEVQEV----- 599

Query: 601 ASAGGSMNEWGVVDRILVGGILISIFTIVGLLFHLGSRTL 634
              G S+  WG +D+ LV G+ +S  TI+ LL  +  R L
Sbjct: 601 VVPGSSVANWGFIDKALVCGVFVSSVTILVLLISIACRVL 599

[Close]

BLAST of Carg21713 vs. TAIR10
Match: AT4G36390.1 (Methylthiotransferase)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-28
Identity = 116/503 (23.06%), Postives = 211/503 (41.95%), Query Frame = 0


Query: 53  TQNLLAPKIPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYL-LSENPEEADLWLINTCT 112
           +++ L   I     IY +T+GC  N +D E +   +   GY  +  +PE A++  +NTC 
Sbjct: 117 SESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCA 176

Query: 113 VKSPSQS----------------AMDTLITKCKNAKKP-LVVAGCVPQGSRDLKELEGVS 172
           ++  ++                  ++    + K+ K P +VV GC+ +  +D K L+   
Sbjct: 177 IRENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKD-KILDSDK 236

Query: 173 IVGV-------QQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKNKFIEILPINVG 232
           +V V       + + R++E V+   KG    L   +T   +   ++ +N     + +  G
Sbjct: 237 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRG 296

Query: 233 CLGACTYCKTKHARGHLGSYTVDSLVNRVRTVINEGVREIWLSSEDTGAYGRD------- 292
           C   C +C     RG   S  V+S++  V  +   GV+E+ L  ++  +Y  D       
Sbjct: 297 CNNMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESG 356

Query: 293 -----------------IGVNLPILLNAIVAELPPDASTMLRIGMTNP-----PFILEHL 352
                            +G+    LL+ +  E P      +R   T+P     P  L +L
Sbjct: 357 ANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPE-----MRFRFTSPHPKDYPDELLYL 416

Query: 353 KEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDI 412
               + +C     + +H+P QSG+  IL  M R YT   +  +V  +  ++P + + +D 
Sbjct: 417 MRDRHNIC-----NLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDF 476

Query: 413 ICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAAR--MKKVPSAIVKKRSREL 472
           I GF GET+E+  ET++L++       ++  +  R  T A R     VP  + ++R  EL
Sbjct: 477 ITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTEL 536

Query: 473 TSVFEAFTP--YNGVEGRVERIWI--TEIAADGIHLVGHT-KGYIQVLVIGPEAMLGTSA 495
              F   T   Y+   G  + + +      A    L+G T KG+    V  P  +   + 
Sbjct: 537 IDAFRETTGPCYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKP--LFDKAC 596

[Close]

BLAST of Carg21713 vs. Swiss-Prot
Match: sp|Q291H5|CDKAL_DROPS (Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA19679 PE=3 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 4.7e-141
Identity = 261/496 (52.62%), Postives = 341/496 (68.75%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           ++DIEDL+                 +V V+ KK+ ++K   DA++  +   P   +    
Sbjct: 13  IDDIEDLISAEDVKPQERYQNK--KSVTVRAKKRVQIKPETDAEEKPT---PRPTIYESV 72

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQ ++VKT+GC+HN SDSEYMAGQL+A+GY LS   +EADLWL+N+CTVK+PS+   
Sbjct: 73  IPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYKLS-GKDEADLWLLNSCTVKNPSEDTF 132

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
              I    +  K +VVAGCVPQG+     L G+S++GVQQIDRVVEVVEETLKGH VRLL
Sbjct: 133 RNEIESGMSNGKHIVVAGCVPQGAPKSDYLRGLSVIGVQQIDRVVEVVEETLKGHSVRLL 192

Query: 181 NRKTL-------PALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV 240
             K +         L LPKVRKN  IEI+ IN GCL  CTYCKTKHARG L SY  + +V
Sbjct: 193 QNKKVHGRRVAGAPLSLPKVRKNPLIEIISINTGCLNQCTYCKTKHARGDLASYPPEEIV 252

Query: 241 NRVRTVINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPF 300
           +R R    EG  EIWL+SEDTGAYGRDIG +LP LL  +V  +P     MLR+GMTNPP+
Sbjct: 253 DRARQSFAEGCCEIWLTSEDTGAYGRDIGSSLPELLWKLVEVIPEHC--MLRVGMTNPPY 312

Query: 301 ILEHLKEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQ 360
           ILEHL+E+A VL HP VY+FLHVPVQSGSD++L  M REY   +F  VVD L E VPG+ 
Sbjct: 313 ILEHLEEVAKVLQHPRVYAFLHVPVQSGSDSVLGEMKREYCRKDFEHVVDFLRERVPGVT 372

Query: 361 VATDIICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRS 420
           +ATDIICGFP ET+EDF ET+ L   Y+ P + I+QF+PRPGTPAA+M+++P+ +VKKR+
Sbjct: 373 IATDIICGFPTETEEDFEETMTLCGRYRFPSLFINQFFPRPGTPAAKMERIPANLVKKRT 432

Query: 421 RELTSVFEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALV 480
           + LT +F ++ PY    G +  + +TEI+ D +H VGH K Y QVL+   + +LGT   V
Sbjct: 433 KRLTDLFYSYEPYAQRVGEMYTVLVTEISHDKLHYVGHNKSYEQVLLPMRDNLLGTRVHV 492

Query: 481 KITSVGRWSVFGEVIE 490
           +ITSV ++S+ GE+++
Sbjct: 493 RITSVSKFSMVGEILD 500

[Close]

BLAST of Carg21713 vs. Swiss-Prot
Match: sp|Q6P4Y0|CDKAL_XENTR (Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus tropicalis OX=8364 GN=cdkal1 PE=2 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.8e-140
Identity = 252/496 (50.81%), Postives = 339/496 (68.35%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           ++DIED++                     + + KNK++      DS+             
Sbjct: 9   LDDIEDIVSATDPKPHDRQNARQNIVPRARKRNKNKIQEEEPPADST------------- 68

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQ I+++T+GCSHN SD EYMAGQL+A+GY ++E PE+ADLWL+N+CTVKSP++   
Sbjct: 69  IPGTQKIWIRTWGCSHNNSDGEYMAGQLAAYGYSITEQPEQADLWLLNSCTVKSPAEDHF 128

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
              I K + A K +V++GCVPQ     + ++G+SI+GVQQIDRVVEVVEET+KGH VRLL
Sbjct: 129 RNSIKKAQEANKKVVLSGCVPQAQPRQEYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLL 188

Query: 181 NRKT-------LPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV 240
            +K           LDLPK+RKN  IEI+ IN GCL ACTYCKTKHARG L SY V+ LV
Sbjct: 189 GQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELV 248

Query: 241 NRVRTVINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPF 300
           +R      EGV EIWL+SEDTGAYGRDIG +LP LL  +V  +P  A  MLR+GMTNPP+
Sbjct: 249 DRAAQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGA--MLRLGMTNPPY 308

Query: 301 ILEHLKEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQ 360
           ILEHL+E+A +L HP VY+FLH+PVQS SD++L  M REY +++F+ VVD L E VPG+ 
Sbjct: 309 ILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIADFKRVVDFLKERVPGIT 368

Query: 361 VATDIICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRS 420
           +ATDIICGFPGETDEDF ET+ L++EYK P + I+QFYPRPGTPAA+M++VP+ + K+R+
Sbjct: 369 IATDIICGFPGETDEDFKETLKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRT 428

Query: 421 RELTSVFEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALV 480
           +EL+ +F +++PY+   G  + + +TE + D  + V H + Y QVLV    A +G    V
Sbjct: 429 KELSQLFHSYSPYDHKIGEEQHVLVTEESFDSQYYVSHNRFYEQVLVPKDPAFVGKMVEV 488

Query: 481 KITSVGRWSVFGEVIE 490
           KI   G+  + G+ ++
Sbjct: 489 KIFEAGKHFMKGQPVQ 489

[Close]

BLAST of Carg21713 vs. Swiss-Prot
Match: sp|Q6NS26|CDKAL_XENLA (Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus laevis OX=8355 GN=cdkal1 PE=2 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-138
Identity = 250/476 (52.52%), Postives = 332/476 (69.75%), Query Frame = 0


Query: 24  ISAVGVKPKKKNKLKSN--PDADDSSSGLFPTQNLLAPK-IPGTQTIYVKTFGCSHNQSD 83
           +SA   KP  +   + N  P A   +      +   A   IPGTQ I+++T+GCSHN SD
Sbjct: 16  VSATDPKPHDRQSARKNIVPRARKRNKNNIQEEEPPADSTIPGTQKIWIRTWGCSHNNSD 75

Query: 84  SEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAMDTLITKCKNAKKPLVVAGCV 143
            EYMAGQL+A+GY ++E PE+ADLWL+N+CTVKSP++      I K + A K +VV+GCV
Sbjct: 76  GEYMAGQLAAYGYSITEQPEKADLWLLNSCTVKSPAEDHFRNSIKKAQEANKKVVVSGCV 135

Query: 144 PQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKT-------LPALDLPKV 203
           PQ       ++G+SI+GVQQIDRVVEVVEET+KGH VRLL +K           LDLPK+
Sbjct: 136 PQAQPRQDYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKI 195

Query: 204 RKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVINEGVREIWLSSED 263
           RKN  IEI+ IN GCL ACTYCKTKHARG L SY V+ LV+R      EGV EIWL+SED
Sbjct: 196 RKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRATQSFQEGVCEIWLTSED 255

Query: 264 TGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKEIANVLCHPCVYSF 323
           TGAYGRDIG +LP LL  +V  +P  A  MLR+GMTNPP+ILEHL+E+A +L HP VY+F
Sbjct: 256 TGAYGRDIGTDLPTLLWKLVEVIPEGA--MLRLGMTNPPYILEHLEEMAKILNHPRVYAF 315

Query: 324 LHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIICGFPGETDEDFCET 383
           LH+PVQS SD++L  M REY +++F+ VVD L E VPG+ +ATDIICGFPGETDEDF ET
Sbjct: 316 LHIPVQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATDIICGFPGETDEDFKET 375

Query: 384 INLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGVEGRV 443
           + L++EYK P + I+QFYPRPGTPAA+M++V + + K+R++EL+ +F ++ PY+   G+ 
Sbjct: 376 LKLVEEYKFPSLFINQFYPRPGTPAAKMEQVLAHVKKRRTKELSQLFHSYDPYDHKIGQK 435

Query: 444 ERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGRWSVFGEVIE 490
           +++ +TE + D  + V H + Y QVLV      +G    VKI   G+  + G+ ++
Sbjct: 436 QQVLVTEESFDSQYYVAHNRFYEQVLVPKDPDFMGKMVEVKIFEAGKHFMKGQPVQ 489

[Close]

BLAST of Carg21713 vs. Swiss-Prot
Match: sp|Q5VV42|CDKAL_HUMAN (Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo sapiens OX=9606 GN=CDKAL1 PE=1 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 6.3e-138
Identity = 241/435 (55.40%), Postives = 317/435 (72.87%), Query Frame = 0


Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPG Q I+++T+GCSHN SD EYMAGQL+A+GY ++EN  +ADLWL+N+CTVK+P++   
Sbjct: 60  IPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHF 119

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
              I K +   K +V+AGCVPQ       L+G+SI+GVQQIDRVVEVVEET+KGH VRLL
Sbjct: 120 RNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLL 179

Query: 181 NRKT-------LPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV 240
            +K           LDLPK+RKN  IEI+ IN GCL ACTYCKTKHARG+L SY +D LV
Sbjct: 180 GQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELV 239

Query: 241 NRVRTVINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPF 300
           +R +    EGV EIWL+SEDTGAYGRDIG NLP LL  +V  +P  A  MLR+GMTNPP+
Sbjct: 240 DRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEVIPEGA--MLRLGMTNPPY 299

Query: 301 ILEHLKEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQ 360
           ILEHL+E+A +L HP VY+FLH+PVQS SD++L  M REY V++F+ VVD L E VPG+ 
Sbjct: 300 ILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGIT 359

Query: 361 VATDIICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRS 420
           +ATDIICGFPGETD+DF ET+ L++EYK P + I+QFYPRPGTPAA+M++VP+ + K+R+
Sbjct: 360 IATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRT 419

Query: 421 RELTSVFEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALV 480
           ++L+ VF +++PY+   G  +++ +TE + D    V H + Y QVLV    A +G    V
Sbjct: 420 KDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEV 479

Query: 481 KITSVGRWSVFGEVI 489
            I   G+  + G+ +
Sbjct: 480 DIYESGKHFMKGQPV 492

[Close]

BLAST of Carg21713 vs. Swiss-Prot
Match: sp|Q7K4W1|CDKAL_DROME (Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila melanogaster OX=7227 GN=CG6550 PE=2 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 8.3e-138
Identity = 254/459 (55.34%), Postives = 325/459 (70.81%), Query Frame = 0


Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQ ++VKT+GC+HN SDSEYMAGQL+A+GY LS   EEADLWL+N+CTVK+PS+   
Sbjct: 67  IPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYRLS-GKEEADLWLLNSCTVKNPSEDTF 126

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
              I       K +VVAGCVPQG+     L G+S++GVQQIDRVVEVVEETLKGH V+LL
Sbjct: 127 RNEIESGMRNGKHVVVAGCVPQGAPKSDYLNGLSVIGVQQIDRVVEVVEETLKGHSVQLL 186

Query: 181 -NRKTL-------PALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSL 240
            N+K +         L LPKVRKN  IEI+ IN GCL  CTYCKTKHARG L SY  + +
Sbjct: 187 QNKKKVHGRRVAGAPLSLPKVRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEV 246

Query: 241 VNRVRTVINEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPP 300
           V R R    EG  EIWL+SEDTGAYGRDIG +LP LL  +V  +P     MLR+GMTNPP
Sbjct: 247 VERARQSFAEGCCEIWLTSEDTGAYGRDIGSSLPELLWQLVEVIPEHC--MLRVGMTNPP 306

Query: 301 FILEHLKEIANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGM 360
           +ILEHL+E+ANVL HP VYSFLHVPVQSGSD++L  M REY   +F  VVD L E VPG+
Sbjct: 307 YILEHLEEVANVLQHPRVYSFLHVPVQSGSDSVLGEMKREYCRQDFEHVVDFLRERVPGV 366

Query: 361 QVATDIICGFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKR 420
            +ATDIICGFP ET++DF ET+ L  +Y+ P + I+QF+PRPGTPAA+M ++P+ +VKKR
Sbjct: 367 TIATDIICGFPTETEDDFEETMTLCAKYRFPSLFINQFFPRPGTPAAKMDRIPANLVKKR 426

Query: 421 SRELTSVFEAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSAL 480
           ++ LT +F ++ PY    G +  + +TE++ D +H VGH K Y QVL+   + +LGT   
Sbjct: 427 TKRLTDLFYSYEPYADRVGEIYTVLVTEVSHDKLHYVGHNKSYEQVLLPMRDNLLGTRVH 486

Query: 481 VKITSVGRWSVFGEVI--ETIVTKHHKTTALEDVPIQAK 510
           V+ITS  ++S+ GE++  E   T+  K   L +V +Q +
Sbjct: 487 VRITSASKFSMVGEILDDERDWTRCAKNQELPNVQVQTR 522

[Close]

BLAST of Carg21713 vs. TrEMBL
Match: tr|A0A1S3CA89|A0A1S3CA89_CUCME (threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498722 PE=4 SV=1)

HSP 1 Score: 1069.3 bits (2764), Expect = 3.3e-309
Identity = 558/636 (87.74%), Postives = 584/636 (91.82%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           MEDIEDLL          GYRLPI+AVGVKPKKKN  KSNP ADDSS+   PTQN L PK
Sbjct: 1   MEDIEDLL--IGGGGAPPGYRLPITAVGVKPKKKNLFKSNPSADDSSNQPSPTQNPLVPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLS+NPE+ADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
           NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV RVR+VI
Sbjct: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVKRVRSVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
           NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE
Sbjct: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IA VL HPCVYSFLHVPVQSGSD ILSAMNREYTVSEFRTVVDTLTELVPGMQ+ATDIIC
Sbjct: 301 IAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGETDEDFCETINLIKEY LPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF
Sbjct: 361 GFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVI PE MLGTSA+ KITS+GR
Sbjct: 421 EAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSAMAKITSIGR 480

Query: 481 WSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGP 540
           WSVFGEVIETI TKHHKTT LED   + KV PCSN+HET XXXXXXXXXXXXXX  CKG 
Sbjct: 481 WSVFGEVIETISTKHHKTT-LEDTLTRDKVSPCSNTHET-XXXXXXXXXXXXXXGSCKGA 540

Query: 541 VALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSM 600
           V++ ++ DSSRN+PLPEEPKRKNL+EW+L R++    PKREE E+P+V+ERKQ  AGG +
Sbjct: 541 VSVGDEVDSSRNIPLPEEPKRKNLIEWVLRRRKSQVMPKREETENPIVTERKQTLAGGRL 600

Query: 601 NEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
           +EWGVVD ILVGGILIS FTI GLLFH+GS TLSSS
Sbjct: 601 DEWGVVDMILVGGILISTFTIFGLLFHVGSTTLSSS 632

[Close]

BLAST of Carg21713 vs. TrEMBL
Match: tr|A0A0A0KSZ4|A0A0A0KSZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652200 PE=4 SV=1)

HSP 1 Score: 1060.1 bits (2740), Expect = 2.0e-306
Identity = 559/637 (87.76%), Postives = 583/637 (91.52%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           MEDIEDLL          GYRLPI+AVGVKPKKKN  KSN  ADDSS+   P QN L PK
Sbjct: 1   MEDIEDLL-IGGGGGAPPGYRLPITAVGVKPKKKNMFKSNASADDSSNEPSPIQNPLVPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLS+NPE+ADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
           NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV RVR+VI
Sbjct: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVRRVRSVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
           NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIV+ELP DASTMLRIGMTNPPFILEHLKE
Sbjct: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVSELPSDASTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IA VL HPCVYSFLHVPVQSGSD ILSAMNREYTVSEFRTVVDTLTELVPGMQ+ATDIIC
Sbjct: 301 IAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGETDEDFCETINLIKEY LPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF
Sbjct: 361 GFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG+EGRVERIWITEIAADGIHLVGHTKGYIQVLVI PE MLGTSA VKITS+GR
Sbjct: 421 EAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSATVKITSIGR 480

Query: 481 WSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGP 540
           WSVFGEVIE I TKHHKTT LED   Q KV PCSN+HE XXXXXXXXXXXXXXXX CKG 
Sbjct: 481 WSVFGEVIEIISTKHHKTTTLEDTLTQDKVSPCSNTHE-XXXXXXXXXXXXXXXXXCKGA 540

Query: 541 VALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHA-PKREERESPVVSERKQASAGGS 600
           VA+ ++ +SSRN+P PEEPKRKNL+EW +LR+RKSH  PKREE E+P+V+ERKQ  AGG 
Sbjct: 541 VAVGDEVNSSRNVPSPEEPKRKNLIEW-VLRRRKSHVLPKREETENPIVTERKQTLAGGR 600

Query: 601 MNEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
           ++EWGVVD+ILVGGILIS FTI GLLFHLGS T SSS
Sbjct: 601 LDEWGVVDKILVGGILISTFTIFGLLFHLGSTTFSSS 634

[Close]

BLAST of Carg21713 vs. TrEMBL
Match: tr|A0A1S3CAU3|A0A1S3CAU3_CUCME (threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498722 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 3.3e-277
Identity = 501/564 (88.83%), Postives = 526/564 (93.26%), Query Frame = 0


Query: 73  GCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAMDTLITKCKNAKK 132
           G   + SDSEYMAGQLSAFGYLLS+NPE+ADLWLINTCTVKSPSQSAMDTLITKCKNAKK
Sbjct: 15  GRKKSMSDSEYMAGQLSAFGYLLSDNPEDADLWLINTCTVKSPSQSAMDTLITKCKNAKK 74

Query: 133 PLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPK 192
           PLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPK
Sbjct: 75  PLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPK 134

Query: 193 VRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVINEGVREIWLSSE 252
           VRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLV RVR+VINEGVREIWLSSE
Sbjct: 135 VRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVKRVRSVINEGVREIWLSSE 194

Query: 253 DTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKEIANVLCHPCVYS 312
           DTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKEIA VL HPCVYS
Sbjct: 195 DTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKEIAKVLSHPCVYS 254

Query: 313 FLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIICGFPGETDEDFCE 372
           FLHVPVQSGSD ILSAMNREYTVSEFRTVVDTLTELVPGMQ+ATDIICGFPGETDEDFCE
Sbjct: 255 FLHVPVQSGSDAILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFCE 314

Query: 373 TINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGVEGR 432
           TINLIKEY LPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNG+EGR
Sbjct: 315 TINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGMEGR 374

Query: 433 VERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGRWSVFGEVIETIV 492
           VERIWITEIAADGIHLVGHTKGYIQVLVI PE MLGTSA+ KITS+GRWSVFGEVIETI 
Sbjct: 375 VERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSAMAKITSIGRWSVFGEVIETIS 434

Query: 493 TKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGPVALDEKDDSSRN 552
           TKHHKTT LED   + KV PCSN+HET XXXXXXXXXXXXXX  CKG V++ ++ DSSRN
Sbjct: 435 TKHHKTT-LEDTLTRDKVSPCSNTHET-XXXXXXXXXXXXXXGSCKGAVSVGDEVDSSRN 494

Query: 553 MPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSMNEWGVVDRILVG 612
           +PLPEEPKRKNL+EW+L R++    PKREE E+P+V+ERKQ  AGG ++EWGVVD ILVG
Sbjct: 495 IPLPEEPKRKNLIEWVLRRRKSQVMPKREETENPIVTERKQTLAGGRLDEWGVVDMILVG 554

Query: 613 GILISIFTIVGLLFHLGSRTLSSS 637
           GILIS FTI GLLFH+GS TLSSS
Sbjct: 555 GILISTFTIFGLLFHVGSTTLSSS 576

[Close]

BLAST of Carg21713 vs. TrEMBL
Match: tr|A0A2I4FPN1|A0A2I4FPN1_9ROSI (threonylcarbamoyladenosine tRNA methylthiotransferase OS=Juglans regia OX=51240 GN=LOC109000976 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 1.2e-263
Identity = 468/636 (73.58%), Postives = 527/636 (82.86%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           M+DIEDL+          G+RLP+S+VGV  KKK            S   + TQ+  +PK
Sbjct: 1   MDDIEDLV---VGAGAPPGFRLPLSSVGVNLKKKR-----------SDKFYQTQDSPSPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIY+KTFGCSHNQSDSEYMAGQLSAFGY LS+NP+EADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYSLSDNPQEADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DTLI KCK AKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTLIAKCKIAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
           NRKTLPALDLPKVR+NKF+EILPINVGCLGACTYCKTKHARGHLGSYT+DSLV RV++VI
Sbjct: 181 NRKTLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
            +GV+EIWLSSEDTGAYGRDIGVNLP LLN+IV+ELPPDASTMLRIGMTNPPFILEHLKE
Sbjct: 241 ADGVKEIWLSSEDTGAYGRDIGVNLPTLLNSIVSELPPDASTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IA VLCHPCVYSFLHVPVQSGSD +LSAMNREYT SEFRTVVDTL ELVPGMQ+ATDIIC
Sbjct: 301 IAEVLCHPCVYSFLHVPVQSGSDAVLSAMNREYTESEFRTVVDTLIELVPGMQIATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGET+EDF +T++LIK+Y  PQVHISQFYPRPGTPAARMKKVPSA+VKKRSRELTSVF
Sbjct: 361 GFPGETNEDFAQTVSLIKKYNFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG+EGR+ERIWITE+AADGIHLVGHTKGY+QVLV+ PE+MLG SA+VKITSVGR
Sbjct: 421 EAFTPYNGMEGRIERIWITEVAADGIHLVGHTKGYVQVLVVAPESMLGVSAIVKITSVGR 480

Query: 481 WSVFGEVIETIVTKHHKTTALEDVPIQAKVPPCSNSHETXXXXXXXXXXXXXXXXCCKGP 540
           WSVFGEV+ETI  K+HK+ + +D   +    PCSN+ E+                 C G 
Sbjct: 481 WSVFGEVMETINHKNHKSASRKDSG-EDIFSPCSNACESYECTREPEPCACCGPESCLGQ 540

Query: 541 VALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGGSM 600
             L+E+  +SRN   PE+   + L+ W LLRKRK+HA KR E E    S+RKQ    GS+
Sbjct: 541 TNLEEESAASRNSMFPEDLNNRYLIGW-LLRKRKNHANKRVEGEIASGSKRKQEWTQGSI 600

Query: 601 NEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSSS 637
            EW VVD+ L+GG+L+S F I+ LL  LG R+LSS+
Sbjct: 601 GEWSVVDKALLGGMLMSFFAIMALLILLGMRSLSSN 620

[Close]

BLAST of Carg21713 vs. TrEMBL
Match: tr|A0A2P5EHS5|A0A2P5EHS5_9ROSA (MiaB-like tRNA modifying enzyme, archaeal-type OS=Trema orientalis OX=63057 GN=TorRG33x02_191530 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 1.7e-257
Identity = 467/637 (73.31%), Postives = 519/637 (81.48%), Query Frame = 0


Query: 1   MEDIEDLLXXXXXXXXXXGYRLPISAVGVKPKKKNKLKSNPDADDSSSGLFPTQNLLAPK 60
           MEDIEDLL          G+RLP++AVG+ PKK  K K   D  + ++       LLAPK
Sbjct: 1   MEDIEDLL-VGSSGGAPPGFRLPLTAVGLNPKKTKKKKPLIDYANINN----NNGLLAPK 60

Query: 61  IPGTQTIYVKTFGCSHNQSDSEYMAGQLSAFGYLLSENPEEADLWLINTCTVKSPSQSAM 120
           IPGTQTIY+KTFGCSHNQSDSEYMAGQLSAFGY LSENPEEADLWLINTCTVKSPSQSAM
Sbjct: 61  IPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYSLSENPEEADLWLINTCTVKSPSQSAM 120

Query: 121 DTLITKCKNAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 180
           DT+ITK K+AKKPLVVAGCVPQGSRDLKELEGVS+VGVQQIDRVVEVVEETLKGHEVRLL
Sbjct: 121 DTIITKGKSAKKPLVVAGCVPQGSRDLKELEGVSVVGVQQIDRVVEVVEETLKGHEVRLL 180

Query: 181 NRKTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVNRVRTVI 240
            RKTLPALDLPKVRKNKF+EILPINVGCLGACTYCKTKHARGHLGSYTVDSLV RVRTVI
Sbjct: 181 TRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVRTVI 240

Query: 241 NEGVREIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDASTMLRIGMTNPPFILEHLKE 300
            +GV+EIWLSSEDTGAYGRDIGVNLP LL AIVAELP DA TMLRIGMTNPPFILEHLKE
Sbjct: 241 LDGVKEIWLSSEDTGAYGRDIGVNLPTLLKAIVAELPSDAGTMLRIGMTNPPFILEHLKE 300

Query: 301 IANVLCHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQVATDIIC 360
           IA+VLCHPCVYSFLHVPVQSGSD +LSAMNREYTVSEFRTVVDTLTELVPGMQ+ATDIIC
Sbjct: 301 IADVLCHPCVYSFLHVPVQSGSDAVLSAMNREYTVSEFRTVVDTLTELVPGMQIATDIIC 360

Query: 361 GFPGETDEDFCETINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVF 420
           GFPGETDEDF +T++LI EYK PQVHISQFYPRPGTPAARMKKVPS +VKKRSRELT+VF
Sbjct: 361 GFPGETDEDFTQTVSLIDEYKFPQVHISQFYPRPGTPAARMKKVPSTVVKKRSRELTTVF 420

Query: 421 EAFTPYNGVEGRVERIWITEIAADGIHLVGHTKGYIQVLVIGPEAMLGTSALVKITSVGR 480
           EAFTPYNG++GRVERIWIT+IA DG+HLVGHTKGYIQVLV+  E++LGTSA+ KITSVGR
Sbjct: 421 EAFTPYNGMKGRVERIWITDIATDGVHLVGHTKGYIQVLVVASESLLGTSAIAKITSVGR 480

Query: 481 WSVFGEVIETIVTKHHKT-TALEDVPIQAKVPPCSNS-HETXXXXXXXXXXXXXXXXCCK 540
           WSVFGEVIETI     KT +++    I+ K  PCSN+  E                  C+
Sbjct: 481 WSVFGEVIETIKDTSCKTASSMGSSSIEEKYSPCSNTCGEACVSSRVQEKTCACGPGDCE 540

Query: 541 GPVALDEKDDSSRNMPLPEEPKRKNLVEWLLLRKRKSHAPKREERESPVVSERKQASAGG 600
           G + ++    +S N    E+   + L+ W LLRKRK+H  K+ E E     ++KQ  AG 
Sbjct: 541 GTIVVESA--ASTNTISQEDRSSRYLIGW-LLRKRKNHVHKKMESEITSGFKKKQEWAGE 600

Query: 601 SMNEWGVVDRILVGGILISIFTIVGLLFHLGSRTLSS 636
           S   W VVDR+L+GG+L+S   IV LL HLG RT S+
Sbjct: 601 SKASWNVVDRVLLGGMLVSFLIIVALLMHLGFRTSSN 629

The following BLAST results are available for this feature:

BLAST of Carg21713 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524910.1	0.0e+00	96.70	threonylcarbamoyladenosine tRNA methylthiotransferase [Cucurbita pepo subsp. pep...	[more]
XP_022949069.1	0.0e+00	97.33	threonylcarbamoyladenosine tRNA methylthiotransferase [Cucurbita moschata]	[more]
XP_022997808.1	0.0e+00	95.29	threonylcarbamoyladenosine tRNA methylthiotransferase [Cucurbita maxima]	[more]
XP_008459673.1	5.0e-309	87.74	PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 [Cuc...	[more]
XP_022155234.1	1.0e-306	87.24	threonylcarbamoyladenosine tRNA methylthiotransferase [Momordica charantia]	[more]

BLAST of Carg21713 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72090.1	2.1e-237	70.16	Methylthiotransferase	[more]
AT4G36390.1	3.3e-28	23.06	Methylthiotransferase	[more]

BLAST of Carg21713 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q291H5\|CDKAL_DROPS	4.7e-141	52.62	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila pseudoobscur...	[more]
sp\|Q6P4Y0\|CDKAL_XENTR	1.8e-140	50.81	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus tropicalis OX=8...	[more]
sp\|Q6NS26\|CDKAL_XENLA	1.3e-138	52.52	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus laevis OX=8355 ...	[more]
sp\|Q5VV42\|CDKAL_HUMAN	6.3e-138	55.40	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo sapiens OX=9606 GN...	[more]
sp\|Q7K4W1\|CDKAL_DROME	8.3e-138	55.34	Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila melanogaster...	[more]

BLAST of Carg21713 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CA89\|A0A1S3CA89_CUCME	3.3e-309	87.74	threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 OS=Cucumis melo...	[more]
tr\|A0A0A0KSZ4\|A0A0A0KSZ4_CUCSA	2.0e-306	87.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652200 PE=4 SV=1	[more]
tr\|A0A1S3CAU3\|A0A1S3CAU3_CUCME	3.3e-277	88.83	threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2 OS=Cucumis melo...	[more]
tr\|A0A2I4FPN1\|A0A2I4FPN1_9ROSI	1.2e-263	73.58	threonylcarbamoyladenosine tRNA methylthiotransferase OS=Juglans regia OX=51240 ...	[more]
tr\|A0A2P5EHS5\|A0A2P5EHS5_9ROSA	1.7e-257	73.31	MiaB-like tRNA modifying enzyme, archaeal-type OS=Trema orientalis OX=63057 GN=T...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0051539	4 iron, 4 sulfur cluster binding
GO:0003824	catalytic activity
GO:0051536	iron-sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006400	tRNA modification

Vocabulary: **INTERPRO**
Term	Definition
IPR002792	TRAM_dom
IPR020612	Methylthiotransferase_CS
IPR006466	MiaB-like_B
IPR023404	rSAM_horseshoe
IPR005839	Methylthiotransferase
IPR013848	Methylthiotransferase_N
IPR007197	rSAM
IPR038135	Methylthiotransferase_N_sf
IPR006638	Elp3/MiaB/NifB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006400	tRNA modification
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21713-RA	Carg21713-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 198..419 e-value: 2.6E-40 score: 149.9
IPR038135	Methylthiotransferase, N-terminal domain superfamily	GENE3D	G3DSA:3.40.50.12160		coord: 66..186 e-value: 1.0E-21 score: 79.0
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 206..377 e-value: 2.5E-19 score: 70.2
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 206..377 e-value: 7.4E-21 score: 69.8
IPR013848	Methylthiotransferase, N-terminal	PFAM	PF00919	UPF0004	coord: 67..145 e-value: 8.5E-20 score: 70.5
IPR013848	Methylthiotransferase, N-terminal	PROSITE	PS51449	MTTASE_N	coord: 65..173 score: 29.145
IPR005839	Methylthiotransferase	TIGRFAM	TIGR00089	TIGR00089	coord: 66..483 e-value: 2.0E-97 score: 324.7
IPR023404	Radical SAM, alpha/beta horseshoe	GENE3D	G3DSA:3.80.30.20		coord: 196..426 e-value: 4.8E-68 score: 231.1
IPR006466	MiaB-like tRNA modifying enzyme, archaeal-type	TIGRFAM	TIGR01578	TIGR01578	coord: 67..488 e-value: 9.6E-136 score: 450.8
None	No IPR available	SFLD	SFLDG01082	B12-binding_domain_containing	coord: 139..411 e-value: 9.9E-28 score: 91.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..596
None	No IPR available	PANTHER	PTHR11918	RADICAL SAM PROTEINS	coord: 3..492
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 202..407 e-value: 5.03805E-6 score: 45.4022
None	No IPR available	SUPERFAMILY	SSF102114	Radical SAM enzymes	coord: 188..422
IPR020612	Methylthiotransferase, conserved site	PROSITE	PS01278	MTTASE_RADICAL	coord: 202..222
IPR002792	TRAM domain	PROSITE	PS50926	TRAM	coord: 427..489 score: 9.966

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21713	Csa5G652200	Cucumber (Chinese Long) v2	carcuB0055
Carg21713	MELO3C022220	Melon (DHL92) v3.5.1	carmeB0051
Carg21713	ClCG08G000280	Watermelon (Charleston Gray)	carwcgB0057
Carg21713	CSPI05G31430	Wild cucumber (PI 183967)	carcpiB0059
Carg21713	Cucsa.061610	Cucumber (Gy14) v1	carcgyB0059
Carg21713	CmaCh01G008300	Cucurbita maxima (Rimu)	carcmaB0067
Carg21713	CmoCh01G008690	Cucurbita moschata (Rifu)	carcmoB0070
Carg21713	Lsi08G000210	Bottle gourd (USVL1VR-Ls)	carlsiB050
Carg21713	Cp4.1LG02g10610	Cucurbita pepo (Zucchini)	carcpeB0073
Carg21713	CsGy5G030720	Cucumber (Gy14) v2	carcgybB0056
Carg21713	MELO3C022220.2	Melon (DHL92) v3.6.1	carmedB0052
Carg21713	CsaV3_5G040460	Cucumber (Chinese Long) v3	carcucB0061
Carg21713	Cla97C08G144720	Watermelon (97103) v2	carwmbB0054

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21713	Wax gourd	carwgoB0058
Carg21713	Wax gourd	carwgoB0059
Carg21713	Cucumber (Gy14) v2	carcgybB0055
Carg21713	Cucurbita maxima (Rimu)	carcmaB0061
Carg21713	Cucurbita moschata (Rifu)	carcmoB0064
Carg21713	Cucurbita pepo (Zucchini)	carcpeB0070