Carg21248 (gene) Silver-seed gourd

Overview
NameCarg21248
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein, mitochondrial
LocationCucurbita_argyrosperma_scaffold_149 : 449361 .. 450893 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTGCTTCTTCAGAAGAATCTTAAGAGCATTTGTGGTGTTCTTGATCGTTGTAAACTATTTGCTTATTTTCATGTATCCTCTGCAAATTTTTCGTCTCTGCTGGAACCTTCCATTTTTATAAGAGCTAGAGATTTGCAGCAAATAATACAATCTGAATATCAGACAAAACTTTCTGATATTGATTTGATCATTTCCAAAGTTCGGGTTGGTAGCAGCGAGGATGAAGTTTTTCAGTCTCTCTTGCACGATCAAGCGTGCAACCGCATACAATTCTCCCATGAACTTGTTTACAAATTGCTCCAACGATTCAAAGATGATTGGAAGTCTGCTTTGGGCGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCGGATTTGTATGACGTTATTATAGATACATTGGGGAAAACAAAGCAAATGGTCAAGATGAAAGGTATGCTAGAAGAAATGAAGGAAGCTCAGCTCGTAACGCTTAATACTCTAGCTAAGGCTATGCGAAGGTTTGCCGGTGCTGGACAATGGGAAGATGCTGTGAGAATATTTGATGATTTGGGAACCTTTGGGTTGGAGAAGAACACTGAATCCATGAATGTGCTGCTTGATACTCTGTGCAAAGAGAAGAGAGTTGAACAAGCTCGACGGATATATTTGGATCTTAAGTCCCATATATCCCCAAATGCGAACACGTTCAATACGTTTATTCATGGTTGGTGTAAAGTCGATAGAGTTGACGAGGCACATTGGACATTACAAGAGATGAAAGGACATGGTTATCGTCCTTGCGTCATTAGTTATTCAACGATTATCCTATTTTATTGTCGTCGTTGCAAGTTTAGTAAGGTTTATGAGTTGCTTGATGAAATGGATGCTCAAGGATGCCCTGCAAATGTCATCACTTACACTACTATCATGTGTTCACTAACAAAGTCAGAAGAATTTGAGGAAGCCTTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACCCGATACGCTGTTTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGAACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGAGTGTTTTACCGAATACATCGACTTACAATTCTATGATTTCCATGTACTGTCATCGTGCACAAGAACAGAACGCTATGAAATTGCTTGAGGAGATGGAGAAATCAGGGCTTTGTAAACCTGATGTCCAGACATATTACCCATTGCTCAAATCCTGCTTTAGAACTGGAAAGACAGACAATGTTTTGAGCAAGTTGTTGGATGACATGATAAATAAACAGCATTTGAGTCTTGATATATCAACTTATTCCCTTTTAATTCATGGTCTTTGTAGAGCAAATAAGTGCGAGTGGGCTTACCAGCTATTTGAGACGATGATCGGTCAAGATATAAAGCCGAGATACCTTACATGTAAACTGCTTCTGGATGAAGTTAAGCAGAAGAACATGGATGAAGTTGGCGAGAGGATTGAAGATATCATGAAGAAATTGTGA

mRNA sequence

ATGTCATTGCTTCTTCAGAAGAATCTTAAGAGCATTTGTGGTGTTCTTGATCGTTGTAAACTATTTGCTTATTTTCATGTATCCTCTGCAAATTTTTCGTCTCTGCTGGAACCTTCCATTTTTATAAGAGCTAGAGATTTGCAGCAAATAATACAATCTGAATATCAGACAAAACTTTCTGATATTGATTTGATCATTTCCAAAGTTCGGGTTGGTAGCAGCGAGGATGAAGTTTTTCAGTCTCTCTTGCACGATCAAGCGTGCAACCGCATACAATTCTCCCATGAACTTGTTTACAAATTGCTCCAACGATTCAAAGATGATTGGAAGTCTGCTTTGGGCGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCGGATTTGTATGACGTTATTATAGATACATTGGGGAAAACAAAGCAAATGGTCAAGATGAAAGGTATGCTAGAAGAAATGAAGGAAGCTCAGCTCGTAACGCTTAATACTCTAGCTAAGGCTATGCGAAGGTTTGCCGGTGCTGGACAATGGGAAGATGCTGTGAGAATATTTGATGATTTGGGAACCTTTGGGTTGGAGAAGAACACTGAATCCATGAATGTGCTGCTTGATACTCTGTGCAAAGAGAAGAGAGTTGAACAAGCTCGACGGATATATTTGGATCTTAAGTCCCATATATCCCCAAATGCGAACACGTTCAATACGTTTATTCATGGTTGGTGTAAAGTCGATAGAGTTGACGAGGCACATTGGACATTACAAGAGATGAAAGGACATGGTTATCGTCCTTGCGTCATTAGTTATTCAACGATTATCCTATTTTATTGTCGTCGTTGCAAGTTTAGTAAGGTTTATGAGTTGCTTGATGAAATGGATGCTCAAGGATGCCCTGCAAATGTCATCACTTACACTACTATCATGTGTTCACTAACAAAGTCAGAAGAATTTGAGGAAGCCTTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACCCGATACGCTGTTTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGAACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGAGTGTTTTACCGAATACATCGACTTACAATTCTATGATTTCCATGTACTGTCATCGTGCACAAGAACAGAACGCTATGAAATTGCTTGAGGAGATGGAGAAATCAGGGCTTTGTAAACCTGATGTCCAGACATATTACCCATTGCTCAAATCCTGCTTTAGAACTGGAAAGACAGACAATGTTTTGAGCAAGTTGTTGGATGACATGATAAATAAACAGCATTTGAGTCTTGATATATCAACTTATTCCCTTTTAATTCATGGTCTTTGTAGAGCAAATAAGTGCGAGTGGGCTTACCAGCTATTTGAGACGATGATCGGTCAAGATATAAAGCCGAGATACCTTACATGTAAACTGCTTCTGGATGAAGTTAAGCAGAAGAACATGGATGAAGTTGGCGAGAGGATTGAAGATATCATGAAGAAATTGTGA

Coding sequence (CDS)

ATGTCATTGCTTCTTCAGAAGAATCTTAAGAGCATTTGTGGTGTTCTTGATCGTTGTAAACTATTTGCTTATTTTCATGTATCCTCTGCAAATTTTTCGTCTCTGCTGGAACCTTCCATTTTTATAAGAGCTAGAGATTTGCAGCAAATAATACAATCTGAATATCAGACAAAACTTTCTGATATTGATTTGATCATTTCCAAAGTTCGGGTTGGTAGCAGCGAGGATGAAGTTTTTCAGTCTCTCTTGCACGATCAAGCGTGCAACCGCATACAATTCTCCCATGAACTTGTTTACAAATTGCTCCAACGATTCAAAGATGATTGGAAGTCTGCTTTGGGCGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCGGATTTGTATGACGTTATTATAGATACATTGGGGAAAACAAAGCAAATGGTCAAGATGAAAGGTATGCTAGAAGAAATGAAGGAAGCTCAGCTCGTAACGCTTAATACTCTAGCTAAGGCTATGCGAAGGTTTGCCGGTGCTGGACAATGGGAAGATGCTGTGAGAATATTTGATGATTTGGGAACCTTTGGGTTGGAGAAGAACACTGAATCCATGAATGTGCTGCTTGATACTCTGTGCAAAGAGAAGAGAGTTGAACAAGCTCGACGGATATATTTGGATCTTAAGTCCCATATATCCCCAAATGCGAACACGTTCAATACGTTTATTCATGGTTGGTGTAAAGTCGATAGAGTTGACGAGGCACATTGGACATTACAAGAGATGAAAGGACATGGTTATCGTCCTTGCGTCATTAGTTATTCAACGATTATCCTATTTTATTGTCGTCGTTGCAAGTTTAGTAAGGTTTATGAGTTGCTTGATGAAATGGATGCTCAAGGATGCCCTGCAAATGTCATCACTTACACTACTATCATGTGTTCACTAACAAAGTCAGAAGAATTTGAGGAAGCCTTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACCCGATACGCTGTTTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGAACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGAGTGTTTTACCGAATACATCGACTTACAATTCTATGATTTCCATGTACTGTCATCGTGCACAAGAACAGAACGCTATGAAATTGCTTGAGGAGATGGAGAAATCAGGGCTTTGTAAACCTGATGTCCAGACATATTACCCATTGCTCAAATCCTGCTTTAGAACTGGAAAGACAGACAATGTTTTGAGCAAGTTGTTGGATGACATGATAAATAAACAGCATTTGAGTCTTGATATATCAACTTATTCCCTTTTAATTCATGGTCTTTGTAGAGCAAATAAGTGCGAGTGGGCTTACCAGCTATTTGAGACGATGATCGGTCAAGATATAAAGCCGAGATACCTTACATGTAAACTGCTTCTGGATGAAGTTAAGCAGAAGAACATGGATGAAGTTGGCGAGAGGATTGAAGATATCATGAAGAAATTGTGA

Protein sequence

MSLLLQKNLKSICGVLDRCKLFAYFHVSSANFSSLLEPSIFIRARDLQQIIQSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRRCKFSKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAGKEREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQNAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL
Homology
[Close]
BLAST of Carg21248 vs. NCBI nr
Match: XP_022944939.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita moschata] >XP_022944940.1 pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita moschata])

HSP 1 Score: 617.5 bits (1591), Expect = 4.2e-173
Identity = 433/510 (84.90%), Postives = 435/510 (85.29%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSSANFSSLLEPSIFIRARDLQQIIQSEYQTKLS 60
           MSL  QKNLKSICGVLDRCKLFAYFHVSSANFSS LEPSI I ARDLQQII SEYQTKLS
Sbjct: 1   MSLRFQKNLKSICGVLDRCKLFAYFHVSSANFSSPLEPSISISARDLQQIIPSEYQTKLS 60

Query: 61  DIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRWAE 120
           DIDLIISKVRVGSSEDEVFQSLLHDQAC  IQFSHELVYKLLQRFKDDWKSALGVFRWAE
Sbjct: 61  DIDLIISKVRVGSSEDEVFQSLLHDQACYHIQFSHELVYKLLQRFKDDWKSALGVFRWAE 120

Query: 121 SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE 180
           SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEM+EAQLVTLNTLAKAMRRFAGAGQWE
Sbjct: 121 SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMREAQLVTLNTLAKAMRRFAGAGQWE 180

Query: 181 DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTFIH 240
           DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTF     
Sbjct: 181 DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFXXXXX 240

Query: 241 GWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                      HWTLQEMKGHG+RPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXHWTLQEMKGHGFRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCF 420
           XVEMPSK                                                  SCF
Sbjct: 361 XVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLGEMEKSGLCKPDVQTYYPLLKSCF 420

Query: 421 RTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPR 480
           RTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPR
Sbjct: 421 RTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPR 480

Query: 481 YLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           YLTCKLLLDEVKQKNMDEV ERIEDIMKKL
Sbjct: 481 YLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]
BLAST of Carg21248 vs. NCBI nr
Match: XP_022966771.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 616.3 bits (1588), Expect = 9.3e-173
Identity = 429/510 (84.12%), Postives = 431/510 (84.51%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSSANFSSLLEPSIFIRARDLQQIIQSEYQTKLS 60
           MSL  QKNLK ICGVLDRCKLFAYFHVSSANFSSLLEPSIFIR RDLQQIIQSEYQTKLS
Sbjct: 1   MSLRFQKNLKRICGVLDRCKLFAYFHVSSANFSSLLEPSIFIRGRDLQQIIQSEYQTKLS 60

Query: 61  DIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRWAE 120
           DIDLIISKVRVGSSEDEVFQSLLHDQACNRI FSHE VYKLLQRFKDDWKSALGVFRWAE
Sbjct: 61  DIDLIISKVRVGSSEDEVFQSLLHDQACNRIHFSHEFVYKLLQRFKDDWKSALGVFRWAE 120

Query: 121 SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE 180
           SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE
Sbjct: 121 SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE 180

Query: 181 DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTFIH 240
           DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNAN       
Sbjct: 181 DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANXXXXXXX 240

Query: 241 GWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                       WTLQEMKGHGYRPCV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXWTLQEMKGHGYRPCVISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCF 420
           XVEMPSK                                                  SCF
Sbjct: 361 XVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCF 420

Query: 421 RTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPR 480
           RTGKTDNVLSKLLDDM+NKQHLSLDISTYSLLIHGLCRANKCEWAYQLFE M+GQDIKPR
Sbjct: 421 RTGKTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMVGQDIKPR 480

Query: 481 YLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           YLTCKLLLDEVKQKNMDEV ERIEDIMKKL
Sbjct: 481 YLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]
BLAST of Carg21248 vs. NCBI nr
Match: XP_023541614.1 (pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.7 bits (1563), Expect = 7.4e-170
Identity = 428/510 (83.92%), Postives = 431/510 (84.51%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSSANFSSLLEPSIFIRARDLQQIIQSEYQTKLS 60
           MSL  QKNLK ICGVLDRCKLFAYFHVSS NFSS LE SI IRARDLQQI+QSE QTKLS
Sbjct: 1   MSLRFQKNLKRICGVLDRCKLFAYFHVSSENFSSPLESSISIRARDLQQIVQSECQTKLS 60

Query: 61  DIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRWAE 120
           DIDLIISKVRVG SEDEVFQSLLHDQACNRI FSHELVYKLLQRFKDDWKSALGVFRWAE
Sbjct: 61  DIDLIISKVRVGRSEDEVFQSLLHDQACNRIHFSHELVYKLLQRFKDDWKSALGVFRWAE 120

Query: 121 SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE 180
           SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE
Sbjct: 121 SLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWE 180

Query: 181 DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTFIH 240
           DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANT      
Sbjct: 181 DAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTXXXXXX 240

Query: 241 GWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                       WTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCF 420
           XVEMPSK                                                  SCF
Sbjct: 361 XVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCF 420

Query: 421 RTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPR 480
           RTGKTDNVLSKLLDDM+NKQHLSLDISTYSLLIHGLCR+NKCEWAYQLFETMIGQDIKPR
Sbjct: 421 RTGKTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRSNKCEWAYQLFETMIGQDIKPR 480

Query: 481 YLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           YLTCKLLLDEVKQKNMDEV ERIEDIMKKL
Sbjct: 481 YLTCKLLLDEVKQKNMDEVAERIEDIMKKL 510

[Close]
BLAST of Carg21248 vs. NCBI nr
Match: XP_008446085.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucumis melo] >XP_008446086.1 PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucumis melo] >XP_016900162.1 PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 1.4e-136
Identity = 409/519 (78.81%), Postives = 443/519 (85.36%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSS---------ANFSSLLEPSIFIRARDLQQII 60
           M L +QK+ K I GV  RCK  AYFHVSS         AN S  LEP+I + ARDLQQ +
Sbjct: 1   MLLHIQKSFKGIWGV--RCKSIAYFHVSSQSCFNGLSPANISYPLEPNISVGARDLQQRV 60

Query: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKS 120
            SE+Q K+SD+D II+KV+VGSSEDEVFQSLL D  CN I+FSH+LVYKLLQRFKDDWKS
Sbjct: 61  PSEFQKKISDVDFIIAKVQVGSSEDEVFQSLLQDPECNSIRFSHDLVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180
           ALGVFRWAESLSGF+HTPDLYD++IDTLGKTKQ+VKM+GMLEEMKEA+LVTL+T+AKAMR
Sbjct: 121 ALGVFRWAESLSGFQHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180

Query: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240
           RFAGAGQWE+A RIFDDL T+GLEKNTESMNVLLDTLCKEK+VEQAR+IYL+LKSHI+PN
Sbjct: 181 RFAGAGQWENAARIFDDLETYGLEKNTESMNVLLDTLCKEKKVEQARQIYLELKSHIAPN 240

Query: 241 ANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXX 300
           ANTFN FIHGWCKV+R+DEAHWTLQEMKG+G+RPCV    XXXXXXXXXXXXXXXXXXXX
Sbjct: 241 ANTFNMFIHGWCKVNRIDEAHWTLQEMKGYGHRPCVISYSXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXVEMPSK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXVEMPSKSVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480
           XX    SCFR GKTD  LS L                       LCRANKC+WAYQLFE 
Sbjct: 421 XXPLLKSCFRNGKTDYDLSNLXXXXXXXXXXXXXXXXXXXXXXXLCRANKCDWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           MI QDIKPRYLTC+LLLDEVKQKNMD+V +RIE IMKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEVKQKNMDKVADRIEGIMKKL 517

[Close]
BLAST of Carg21248 vs. NCBI nr
Match: XP_011655585.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucumis sativus] >KGN51698.1 hypothetical protein Csa_5G590150 [Cucumis sativus])

HSP 1 Score: 468.4 bits (1204), Expect = 3.1e-128
Identity = 405/519 (78.03%), Postives = 437/519 (84.20%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSS---------ANFSSLLEPSIFIRARDLQQII 60
           M L +QK+ K I GVLDRCK FAYFHVSS         AN    LEP+I + ARDLQQ +
Sbjct: 1   MLLHIQKSSKGIWGVLDRCKSFAYFHVSSQRCSDALSPANILYPLEPNISVGARDLQQRV 60

Query: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKS 120
            SE+Q K SDID II+KV+VGSSEDEVFQSLL D  CN IQ SH+LVYKLLQRFKDDWKS
Sbjct: 61  PSEFQKKKSDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD++IDTLGKTKQ+VKM+GMLEEMKEA+LVTL+T+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180

Query: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240
           RFAGAGQWE+AVRIFDDL T+GLEKNTESMNVLLDTLCKEK+VE+AR++YL+LKSHI+PN
Sbjct: 181 RFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPN 240

Query: 241 ANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXX 300
           ANTFN FIHGWCKV+++DEAHWTL+EMKG+G+RPCV     XXXXXXXXXXXXXXXXXXX
Sbjct: 241 ANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXVEMP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXVEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480
           XXXXXXSCFRTGKTD  LS                                  AYQLFE 
Sbjct: 421 XXXXXXSCFRTGKTDYDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYQLFEK 480

Query: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           MI QDIKPRYLTC+LLLDE KQKNMD V +RIE IMKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 519

[Close]
BLAST of Carg21248 vs. TAIR10
Match: AT3G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 275.4 bits (703), Expect = 7.1e-74
Identity = 258/455 (56.70%), Postives = 293/455 (64.40%), Query Frame = 0 

Query: 54  EYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSAL 113
           EY       ++I+ +     SED+VF+ L  D+ C R+  S  LV+KLL RF+DDW+SAL
Sbjct: 46  EYSQSEEIWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSAL 105

Query: 114 GVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRF 173
           G+ +WAES  G KH+ D YD+ +D LGK K+  +MK  +E M+  +LVTLNT+AK MRRF
Sbjct: 106 GILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRF 165

Query: 174 AGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNAN 233
           AGAG+WE+AV IFD LG FGLEKNTESMN+LLDTLCKEKRVEQAR + L LKSHI+    
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITXXXX 225

Query: 234 TFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXX 293
                                       G+RPCV     XXXXXXXXXXXXXXXXXXXXX
Sbjct: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGFRPCVISYTTXXXXXXXXXXXXXXXXXXXXX 285

Query: 294 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 286 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345

Query: 354 XXXXXXXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
           XXXXXX  VEMP                                                
Sbjct: 346 XXXXXXFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405

Query: 414 XXXXSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMI 473
               SCF+ G    V  KLL +M+ K HLSLD STY+ LI  LCRAN CEWAY LFE MI
Sbjct: 406 PLLRSCFKRGDVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMI 465

Query: 474 GQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMK 509
            QDI PR+ TC LLL+EVK+KNM E  ERIE IMK
Sbjct: 466 SQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499

[Close]
BLAST of Carg21248 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 6.3e-30
Identity = 75/218 (34.40%), Postives = 127/218 (58.26%), Query Frame = 0 

Query: 48  QQIIQSEYQTK-LSDIDLIISKV-RVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRF 107
           QQ+ +     K + DID +   + +  +S ++V + L     C+ +  +  LV ++L+RF
Sbjct: 87  QQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKEL---SKCD-VVVTESLVLQVLRRF 146

Query: 108 KDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEM---KEAQLVT 167
            + W  A G F WA S +G+ H+   Y+ ++D LGK +    M  ++ EM   +E++LVT
Sbjct: 147 SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVT 206

Query: 168 LNTLAKAMRRFAGAGQWEDAVRIFDDL-GTFGLEKNTESMNVLLDTLCKEKRVEQARRIY 227
           L+T++K MRR A +G++  AV  F ++  ++G++ +T +MN L+D L KE  +E A  ++
Sbjct: 207 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 266

Query: 228 LDLKSHISPNANTFNTFIHGWCKVDRVDEAHWTLQEMK 260
           L L   I P+A TFN  IHG+CK  + D+A   +  MK
Sbjct: 267 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMK 300

[Close]
BLAST of Carg21248 vs. TAIR10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 9.7e-23
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 0 

Query: 90  RIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMK 149
           ++  SH+L+ ++L+RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M 
Sbjct: 156 KLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMV 215

Query: 150 GMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLC 209
            +LEEM    L+T+ T   AM+ FA A + + AV IF+ +  +  +   E++N LLD+L 
Sbjct: 216 SVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275

Query: 210 KEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKV 246
           + K  ++A+ ++  LK   +PN  T+   ++GWC+V
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311

[Close]
BLAST of Carg21248 vs. TAIR10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 0 

Query: 90  RIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMK 149
           ++  SH+L+ ++L+RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M 
Sbjct: 156 KLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 215

Query: 150 GMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLC 209
            +LEEM    L+T+ T   AM+ FA A + + AV IF+ +  +  +   E++N LLD+L 
Sbjct: 216 SVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275

Query: 210 KEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKV 246
           + K  ++A+ ++  LK   +PN  T+   ++GWC+V
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311

[Close]
BLAST of Carg21248 vs. TAIR10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 0 

Query: 90  RIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMK 149
           ++  SH+L+ ++L+RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M 
Sbjct: 155 KLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 214

Query: 150 GMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLC 209
            +LEEM    L+T+ T   AM+ FA A + + AV IF+ +  +  +   E++N LLD+L 
Sbjct: 215 SVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 274

Query: 210 KEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKV 246
           + K  ++A+ ++  LK   +PN  T+   ++GWC+V
Sbjct: 275 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 310

[Close]
BLAST of Carg21248 vs. Swiss-Prot
Match: sp|Q9M8W9|PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-72
Identity = 258/455 (56.70%), Postives = 293/455 (64.40%), Query Frame = 0 

Query: 54  EYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSAL 113
           EY       ++I+ +     SED+VF+ L  D+ C R+  S  LV+KLL RF+DDW+SAL
Sbjct: 46  EYSQSEEIWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSAL 105

Query: 114 GVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRF 173
           G+ +WAES  G KH+ D YD+ +D LGK K+  +MK  +E M+  +LVTLNT+AK MRRF
Sbjct: 106 GILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRF 165

Query: 174 AGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNAN 233
           AGAG+WE+AV IFD LG FGLEKNTESMN+LLDTLCKEKRVEQAR + L LKSHI+    
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITXXXX 225

Query: 234 TFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXX 293
                                       G+RPCV     XXXXXXXXXXXXXXXXXXXXX
Sbjct: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGFRPCVISYTTXXXXXXXXXXXXXXXXXXXXX 285

Query: 294 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 286 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345

Query: 354 XXXXXXXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
           XXXXXX  VEMP                                                
Sbjct: 346 XXXXXXFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405

Query: 414 XXXXSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMI 473
               SCF+ G    V  KLL +M+ K HLSLD STY+ LI  LCRAN CEWAY LFE MI
Sbjct: 406 PLLRSCFKRGDVVEV-GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMI 465

Query: 474 GQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMK 509
            QDI PR+ TC LLL+EVK+KNM E  ERIE IMK
Sbjct: 466 SQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499

[Close]
BLAST of Carg21248 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-28
Identity = 75/218 (34.40%), Postives = 127/218 (58.26%), Query Frame = 0 

Query: 48  QQIIQSEYQTK-LSDIDLIISKV-RVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRF 107
           QQ+ +     K + DID +   + +  +S ++V + L     C+ +  +  LV ++L+RF
Sbjct: 87  QQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKEL---SKCD-VVVTESLVLQVLRRF 146

Query: 108 KDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEM---KEAQLVT 167
            + W  A G F WA S +G+ H+   Y+ ++D LGK +    M  ++ EM   +E++LVT
Sbjct: 147 SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVT 206

Query: 168 LNTLAKAMRRFAGAGQWEDAVRIFDDL-GTFGLEKNTESMNVLLDTLCKEKRVEQARRIY 227
           L+T++K MRR A +G++  AV  F ++  ++G++ +T +MN L+D L KE  +E A  ++
Sbjct: 207 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 266

Query: 228 LDLKSHISPNANTFNTFIHGWCKVDRVDEAHWTLQEMK 260
           L L   I P+A TFN  IHG+CK  + D+A   +  MK
Sbjct: 267 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMK 300

[Close]
BLAST of Carg21248 vs. Swiss-Prot
Match: sp|Q3EAF8|PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-21
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 0 

Query: 90  RIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMK 149
           ++  SH+L+ ++L+RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M 
Sbjct: 156 KLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMV 215

Query: 150 GMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLC 209
            +LEEM    L+T+ T   AM+ FA A + + AV IF+ +  +  +   E++N LLD+L 
Sbjct: 216 SVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275

Query: 210 KEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKV 246
           + K  ++A+ ++  LK   +PN  T+   ++GWC+V
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311

[Close]
BLAST of Carg21248 vs. Swiss-Prot
Match: sp|Q9LZP3|PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-21
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 0 

Query: 90  RIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMK 149
           ++  SH+L+ ++L+RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M 
Sbjct: 156 KLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 215

Query: 150 GMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLC 209
            +LEEM    L+T+ T   AM+ FA A + + AV IF+ +  +  +   E++N LLD+L 
Sbjct: 216 SVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275

Query: 210 KEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKV 246
           + K  ++A+ ++  LK   +PN  T+   ++GWC+V
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311

[Close]
BLAST of Carg21248 vs. Swiss-Prot
Match: sp|Q9LEQ7|PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-21
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 0 

Query: 90  RIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMK 149
           ++  SH+L+ ++L+RF+   K A   F WA    GF H    Y+ ++  L KT+Q   M 
Sbjct: 155 KLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMV 214

Query: 150 GMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLC 209
            +LEEM    L+T+ T   AM+ FA A + + AV IF+ +  +  +   E++N LLD+L 
Sbjct: 215 SVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 274

Query: 210 KEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKV 246
           + K  ++A+ ++  LK   +PN  T+   ++GWC+V
Sbjct: 275 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 310

[Close]
BLAST of Carg21248 vs. TrEMBL
Match: tr|A0A1S3BE82|A0A1S3BE82_CUCME (pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488914 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.3e-137
Identity = 409/519 (78.81%), Postives = 443/519 (85.36%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSS---------ANFSSLLEPSIFIRARDLQQII 60
           M L +QK+ K I GV  RCK  AYFHVSS         AN S  LEP+I + ARDLQQ +
Sbjct: 1   MLLHIQKSFKGIWGV--RCKSIAYFHVSSQSCFNGLSPANISYPLEPNISVGARDLQQRV 60

Query: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKS 120
            SE+Q K+SD+D II+KV+VGSSEDEVFQSLL D  CN I+FSH+LVYKLLQRFKDDWKS
Sbjct: 61  PSEFQKKISDVDFIIAKVQVGSSEDEVFQSLLQDPECNSIRFSHDLVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180
           ALGVFRWAESLSGF+HTPDLYD++IDTLGKTKQ+VKM+GMLEEMKEA+LVTL+T+AKAMR
Sbjct: 121 ALGVFRWAESLSGFQHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180

Query: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240
           RFAGAGQWE+A RIFDDL T+GLEKNTESMNVLLDTLCKEK+VEQAR+IYL+LKSHI+PN
Sbjct: 181 RFAGAGQWENAARIFDDLETYGLEKNTESMNVLLDTLCKEKKVEQARQIYLELKSHIAPN 240

Query: 241 ANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXX 300
           ANTFN FIHGWCKV+R+DEAHWTLQEMKG+G+RPCV    XXXXXXXXXXXXXXXXXXXX
Sbjct: 241 ANTFNMFIHGWCKVNRIDEAHWTLQEMKGYGHRPCVISYSXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXVEMPSK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXVEMPSKSVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480
           XX    SCFR GKTD  LS L                       LCRANKC+WAYQLFE 
Sbjct: 421 XXPLLKSCFRNGKTDYDLSNLXXXXXXXXXXXXXXXXXXXXXXXLCRANKCDWAYQLFEK 480

Query: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           MI QDIKPRYLTC+LLLDEVKQKNMD+V +RIE IMKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEVKQKNMDKVADRIEGIMKKL 517

[Close]
BLAST of Carg21248 vs. TrEMBL
Match: tr|A0A0A0KQ08|A0A0A0KQ08_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590150 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.1e-128
Identity = 405/519 (78.03%), Postives = 437/519 (84.20%), Query Frame = 0 

Query: 1   MSLLLQKNLKSICGVLDRCKLFAYFHVSS---------ANFSSLLEPSIFIRARDLQQII 60
           M L +QK+ K I GVLDRCK FAYFHVSS         AN    LEP+I + ARDLQQ +
Sbjct: 1   MLLHIQKSSKGIWGVLDRCKSFAYFHVSSQRCSDALSPANILYPLEPNISVGARDLQQRV 60

Query: 61  QSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKS 120
            SE+Q K SDID II+KV+VGSSEDEVFQSLL D  CN IQ SH+LVYKLLQRFKDDWKS
Sbjct: 61  PSEFQKKKSDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKS 120

Query: 121 ALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMR 180
           ALGVFRWAESLSGFKHTPDLYD++IDTLGKTKQ+VKM+GMLEEMKEA+LVTL+T+AKAMR
Sbjct: 121 ALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMR 180

Query: 181 RFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPN 240
           RFAGAGQWE+AVRIFDDL T+GLEKNTESMNVLLDTLCKEK+VE+AR++YL+LKSHI+PN
Sbjct: 181 RFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPN 240

Query: 241 ANTFNTFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXX 300
           ANTFN FIHGWCKV+++DEAHWTL+EMKG+G+RPCV     XXXXXXXXXXXXXXXXXXX
Sbjct: 241 ANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXVEMP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXVEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXSCFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFET 480
           XXXXXXSCFRTGKTD  LS                                  AYQLFE 
Sbjct: 421 XXXXXXSCFRTGKTDYDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYQLFEK 480

Query: 481 MIGQDIKPRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           MI QDIKPRYLTC+LLLDE KQKNMD V +RIE IMKKL
Sbjct: 481 MISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 519

[Close]
BLAST of Carg21248 vs. TrEMBL
Match: tr|A0A067GTK5|A0A067GTK5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010215mg PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 2.1e-112
Identity = 325/512 (63.48%), Postives = 376/512 (73.44%), Query Frame = 0 

Query: 5   LQKNLKSICGVLDRCKLFAYFHVSSANFSSLLEPSIFIR-----AR-DLQQIIQSEYQTK 64
           LQK LK     L+       FH SS N S ++  S         AR D  Q++  +   +
Sbjct: 5   LQKYLKQARIPLNPLTSRIRFHSSSENCSHIVSSSPIESYCSDGARLDHHQVLCVD-SPR 64

Query: 65  LSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRW 124
           L DID+IISKV VGSSEDEVFQSL  D  CN IQ SH LV KL+ RFKDDWKSALG+FRW
Sbjct: 65  LPDIDVIISKVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW 124

Query: 125 AESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQ 184
           A S  G++H+ ++Y++++D LGK +QM +M+ +LEEM +  +VTLNT+AK MRRF+GAGQ
Sbjct: 125 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTIAKVMRRFSGAGQ 184

Query: 185 WEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTF 244
           WEDAVR FD+LGTFGLEKNTE+MN+LLDTLCKE +VE AR ++L+LKS I PNA+TFN F
Sbjct: 185 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 244

Query: 245 IHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           IHGWCK++RVDEA WT+QEMKGHG  PCV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 245 IHGWCKINRVDEAQWTIQEMKGHGCHPCVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364

Query: 365 XXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 424
           X  VEMP                                                    S
Sbjct: 365 XYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 424

Query: 425 CFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIK 484
           CF+TGKTD  LS+LLDDM+NK HLSLDI+TY+L+IHGLCRANKCEWAY LF+ MIG DI 
Sbjct: 425 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 484

Query: 485 PRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           PRY TC+L+LDEVKQK+M +  E+IE +MKKL
Sbjct: 485 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515

[Close]
BLAST of Carg21248 vs. TrEMBL
Match: tr|V4SU20|V4SU20_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031257mg PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111
Identity = 325/512 (63.48%), Postives = 375/512 (73.24%), Query Frame = 0 

Query: 5   LQKNLKSICGVLDRCKLFAYFHVSSAN-----FSSLLEPSIFIRAR-DLQQIIQSEYQTK 64
           LQK LK     L+       FH SS N      SS +E      AR D  Q++  +   +
Sbjct: 5   LQKYLKQARIPLNPLTSRIRFHSSSENCSHVVSSSPIESYCSDGARLDHHQVLCVD-SPR 64

Query: 65  LSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRW 124
           L DID+IIS V VGSSEDEVFQSL  D  CN IQ SH LV KL+ RFKDDWKSALG+FRW
Sbjct: 65  LPDIDVIISNVHVGSSEDEVFQSLKQDHVCNAIQPSHYLVNKLIHRFKDDWKSALGIFRW 124

Query: 125 AESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQ 184
           A S  G++H+ ++Y++++D LGK +QM +M+ +LEEM +  +VTLNT+AK MRRF+GAGQ
Sbjct: 125 AGSCPGYEHSSEIYEMMVDILGKVRQMDQMRALLEEMSKGHIVTLNTVAKVMRRFSGAGQ 184

Query: 185 WEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTF 244
           WEDAVR FD+LGTFGLEKNTE+MN+LLDTLCKE +VE AR ++L+LKS I PNA+TFN F
Sbjct: 185 WEDAVRTFDELGTFGLEKNTETMNLLLDTLCKEGKVELARSVFLELKSCIPPNAHTFNIF 244

Query: 245 IHGWCKVDRVDEAHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           IHGWCK++RVDEA WT+QEMKGHG  PCV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 245 IHGWCKINRVDEAQWTIQEMKGHGCHPCVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364

Query: 365 XXXVEMPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 424
           X  VEMP                                                    S
Sbjct: 365 XYQVEMPENGVAPDTSTFNTMITMFSHHGHHEKAFHVLEEMNKLEHCKPNVQTFHPLLKS 424

Query: 425 CFRTGKTDNVLSKLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIK 484
           CF+TGKTD  LS+LLDDM+NK HLSLDI+TY+L+IHGLCRANKCEWAY LF+ MIG DI 
Sbjct: 425 CFKTGKTDECLSQLLDDMVNKHHLSLDITTYTLVIHGLCRANKCEWAYLLFKEMIGHDIT 484

Query: 485 PRYLTCKLLLDEVKQKNMDEVGERIEDIMKKL 511
           PRY TC+L+LDEVKQK+M +  E+IE +MKKL
Sbjct: 485 PRYQTCRLILDEVKQKHMYDAAEKIEAVMKKL 515

[Close]
BLAST of Carg21248 vs. TrEMBL
Match: tr|A0A2N9HDP7|A0A2N9HDP7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38164 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.0e-111
Identity = 352/440 (80.00%), Postives = 382/440 (86.82%), Query Frame = 0 

Query: 71  VGSSEDEVFQSLLHDQACNRIQFSHELVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPD 130
           +G S++EV QSLLHDQACN IQ S ELV KLL +FKDDWKSALG FRWA S S +KHTP+
Sbjct: 20  LGVSDNEVLQSLLHDQACNSIQLSSELVNKLLHKFKDDWKSALGAFRWAGSRSSYKHTPE 79

Query: 131 LYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLG 190
            YD+++D LG+ KQM KMK +LEEM +  LVTLNT+AK MRRFAGAG+WEDAVR FD+LG
Sbjct: 80  AYDMLVDILGRMKQMDKMKALLEEMNQYHLVTLNTVAKVMRRFAGAGKWEDAVRTFDELG 139

Query: 191 TFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNTFIHGWCKVDRVDE 250
           TFGLEKNTESMN+LLDTLCKE +V+QAR I+L+LKSHISP+A TFN FIHGWCKV RVDE
Sbjct: 140 TFGLEKNTESMNLLLDTLCKENKVQQAREIFLELKSHISPDAYTFNIFIHGWCKVKRVDE 199

Query: 251 AHWTLQEMKGHGYRPCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310
           A+WT++EMKGHG R   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 200 AYWTIEEMKGHGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 259

Query: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEMPSKXXX 370
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEMP  XXX
Sbjct: 260 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEMPRXXXX 319

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCFRTGKTDNVLS 430
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             +CF+TGKTD+ LS
Sbjct: 320 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKPDVQTYYPLLKACFKTGKTDSCLS 379

Query: 431 KLLDDMINKQHLSLDISTYSLLIHGLCRANKCEWAYQLFETMIGQDIKPRYLTCKLLLDE 490
           KLLDDM+NK HLSLDIS YSLLIHGLCRANKCEWAY LFE MIGQ+I PRY TC LLLDE
Sbjct: 380 KLLDDMVNKHHLSLDISAYSLLIHGLCRANKCEWAYTLFEEMIGQEITPRYHTCCLLLDE 439

Query: 491 VKQKNMDEVGERIEDIMKKL 511
           VKQKNM    ERIED+MKKL
Sbjct: 440 VKQKNMYAAAERIEDLMKKL 459

The following BLAST results are available for this feature:
BLAST of Carg21248 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944939.14.2e-17384.90pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Cucurbita ... [more]
XP_022966771.19.3e-17384.12pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucur... [more]
XP_023541614.17.4e-17083.92pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Cucur... [more]
XP_008446085.11.4e-13678.81PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial ... [more]
XP_011655585.13.1e-12878.03PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial ... [more]
BLAST of Carg21248 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04130.17.1e-7456.70Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G22670.16.3e-3034.40Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.19.7e-2333.97Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62470.11.3e-2233.97Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.11.3e-2233.97Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg21248 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M8W9|PP211_ARATH1.3e-7256.70Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop... [more]
sp|Q9LUJ4|PP248_ARATH1.1e-2834.40Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
sp|Q3EAF8|PP294_ARATH1.7e-2133.97Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
sp|Q9LZP3|PP293_ARATH2.3e-2133.97Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
sp|Q9LEQ7|PP382_ARATH2.3e-2133.97Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
BLAST of Carg21248 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BE82|A0A1S3BE82_CUCME9.3e-13778.81pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Cucumis ... [more]
tr|A0A0A0KQ08|A0A0A0KQ08_CUCSA2.1e-12878.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590150 PE=4 SV=1[more]
tr|A0A067GTK5|A0A067GTK5_CITSI2.1e-11263.48Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010215mg PE=4 SV=1[more]
tr|V4SU20|V4SU20_9ROSI1.3e-11163.48Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031257mg PE=4 ... [more]
tr|A0A2N9HDP7|A0A2N9HDP7_FAGSY3.0e-11180.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38164 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21248-RACarg21248-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 365..510
e-value: 9.3E-30
score: 106.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 296..364
e-value: 2.1E-17
score: 65.2
coord: 67..225
e-value: 2.1E-21
score: 78.3
coord: 226..295
e-value: 2.2E-15
score: 58.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 132..158
e-value: 0.61
score: 10.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 289..348
e-value: 8.6E-11
score: 41.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 442..472
e-value: 1.3E-8
score: 34.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 268..301
e-value: 2.3E-6
score: 25.4
coord: 340..373
e-value: 6.6E-5
score: 20.8
coord: 448..479
e-value: 3.9E-6
score: 24.7
coord: 234..265
e-value: 2.5E-4
score: 19.0
coord: 375..408
e-value: 4.3E-6
score: 24.6
coord: 303..337
e-value: 6.5E-9
score: 33.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 196..244
e-value: 5.6E-9
score: 35.9
coord: 371..420
e-value: 3.1E-12
score: 46.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 336..371
score: 10.26
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..158
score: 6.665
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 266..300
score: 9.339
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 231..265
score: 12.014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..335
score: 11.97
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 408..443
score: 7.388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..227
score: 8.462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 445..479
score: 11.707
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 162..196
score: 7.399
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..406
score: 11.597
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..510
NoneNo IPR availablePANTHERPTHR24015:SF347SUBFAMILY NOT NAMEDcoord: 48..510

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg21248Cla009989Watermelon (97103) v1carwmB0686
Carg21248Csa5G590150Cucumber (Chinese Long) v2carcuB0713
Carg21248CSPI05G21660Wild cucumber (PI 183967)carcpiB0727
Carg21248Cucsa.075460Cucumber (Gy14) v1carcgyB0772
Carg21248Lsi04G006550Bottle gourd (USVL1VR-Ls)carlsiB629
Carg21248Cp4.1LG09g06110Cucurbita pepo (Zucchini)carcpeB0970
Carg21248CsGy5G021180Cucumber (Gy14) v2carcgybB0690
Carg21248CsaV3_5G030530Cucumber (Chinese Long) v3carcucB0730
Carg21248Cla97C05G108520Watermelon (97103) v2carwmbB0717
Carg21248Bhi07G001504Wax gourdcarwgoB0811
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg21248Melon (DHL92) v3.6.1carmedB0702
Carg21248Melon (DHL92) v3.6.1carmedB0703
Carg21248Watermelon (Charleston Gray)carwcgB0666
Carg21248Watermelon (97103) v1carwmB0685
Carg21248Watermelon (97103) v2carwmbB0718
Carg21248Wax gourdcarwgoB0810
Carg21248Silver-seed gourdcarcarB285
Carg21248Silver-seed gourdcarcarB551
Carg21248Cucumber (Gy14) v1carcgyB0773
Carg21248Cucurbita maxima (Rimu)carcmaB0971
Carg21248Cucurbita maxima (Rimu)carcmaB0969
Carg21248Cucurbita maxima (Rimu)carcmaB0970
Carg21248Cucurbita moschata (Rifu)carcmoB0942
Carg21248Cucurbita moschata (Rifu)carcmoB0943
Carg21248Cucurbita moschata (Rifu)carcmoB0945
Carg21248Cucurbita pepo (Zucchini)carcpeB0971
Carg21248Cucurbita pepo (Zucchini)carcpeB0972
Carg21248Wild cucumber (PI 183967)carcpiB0726
Carg21248Cucumber (Chinese Long) v2carcuB0712
Carg21248Cucumber (Chinese Long) v3carcucB0729
Carg21248Bottle gourd (USVL1VR-Ls)carlsiB630
Carg21248Melon (DHL92) v3.5.1carmeB0689
Carg21248Melon (DHL92) v3.5.1carmeB0690