Carg21079 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21079
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	3-deoxy-manno-octulosonate cytidylyltransferase
Location	Cucurbita_argyrosperma_scaffold_158 : 33556 .. 36581 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATCAACAGCCCAATTTCCGCATCAGTACCAAGCCCCTCTCATCGCGGGAGACCATGTCGGTTTGCTCTTCTTCTTCTTCTTCTTCCTCATTATCATCATCCGGGTACTTTGGCAGTGCCAAGGCCTGGATTGTGCATGGGATTGTTGCCGGAGTCGCCATTGGCGCCGCCATCGGAGCTCGAGCTTATTTGGGTCGATCCAACAAATTCCGTAGCCGCGTTGTCGGAATCATTCCCGCCCGTTTCGCCTCTTCGCGGTTCCAGGGGAAGCCTCTCGTTGAGATTCTTGGAAAACCCATGATCCAGGTTTCTAATTGTTTCTCATACGTTCTTTTTTGTTCGTGCCGTTTCTGGATCTATCAATTTCGGTTTATACTGCTGTTAATACTCGGAATTTGCATTTGTTTCATAGCTGATCTGGGTTTTGTTCGTTTCAATTTCTAAGTTTAAGTTGAAACTATTCATTATGTGATGGATCTACCATGAAATGTAACTTCTATTTTCCTAACTCTTTTAAGTAGATTATGGGAGAAGAATTATAGGTGAATTAGCAGAATTTCTCTTTACCTATTGGATAGGTGCTGGTAAATCTGTTCACTCTGGTCTTAGGGATTAGGAAGCTTGGTGAGCTTAGCTATAGCAGAAATCTCAAAAAGAAATTAACGGCGAAGTTCTATGGTTTTGATATGGAATCAATCTAAGGGAAAGTTTTGGAACGGATTATCTTGATGATCAAGATCAAGAGTAAAGAAAACTCGTGATTCGAATCACTCTAAAAGAGGTTTGATCAATGACACTTGAATGACTCTAAAGCCTTGAGGGAAAGTCCGAAAGGAAAATACCAAAGAGGACAATATCTGCATGGATCTGGGTTGTTACAAATGGTATCAGAGCCAGATACCGGACTATATGCCAGCGAGGAGGCTGTTCCCTAAAGGGGGCAGACACGAGACGGTGTGCCAGTAAGGACGCTGGCCCCAAAGGGGGTGGATTTGGCAGGGATCCCACATCGATTGGAGAAAGGATAGAGTGCCAGCGAAGACGCTGGACCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGTGTGGAAAACTTTTCCCTAGCGTGTTTTAAAGCCTTGAGGGAAAGTTCGAAAGGGAAAGCCCGAAGAGGACAATATATGCTAGCGGTGGATCTGGGTCGTTACAGTAACCCACGTGGGTTACAATTTTTTGAAGTCTTAGCCTTCGTCTCTATTTTCTTTTTACCCAAGTGTTTGGCCTTTACTTCTCTGTGCCCGTTCTCGAACAAAGCAAGGGATCGAGCAGCACAAAAGAAAACTTTGATTCGTCAAGAAATGCTGTCTTTTGCTAATCTTCTCTGTCTCGAATTTGGCTTGGCTTTCCTCCCGATCTTGTAGTTTCATATTATTTATAAAATTGTTCCTTATCCCAAAGAAAGGACAAATAAATTGATCAACAGCATCATTTTTCCATCGAAATCGGATACACAAGGAACCTAACGACATCGGACTCTACTTTTACATCGTTCGTTTTTTCACTTCGGTCGAAATTTTAATATGCCTATGAAATTCATATTCAACAGAGAACATGGGAAAGGGCAAGAATGGCTACTACATTGGACTGTGTTGGTAAGCATGTTTGCTTTTTTCTTCTTGTTTCAAGCTTCACCATCTCATCCTTTCCTTTTGATTTGAAATCTTTCCAGTTGTTGCAACCGATGATGCTAAGATTGCACAATGCTGTAAAGAATTTGGTGCTGATGTTGTAATGACATCAGAGTCGTGTAGGAACGGTAATCACTGTGATTTTATAATGAAATCTCGAGATTACTTTTGAAGTCTTATAATTTTCGGTACAAAACTACTTTAGGAACTGAGCGTTGTAATGAAGCGCTTCAAAAGCTTGAGAAGAAATACGATATCGTCGTAAACATTCAAGGGGATGAGCCCCTTATTGAACCGGACATCATCGATGGCATCGTTAAAGCTCTGCAGGTAAAACGATCTCATATCTTTCAGTTATTGTAACATTTATATTCGATAGTGTGGTGAAGATGCGTTCGACTTCACGAGCTCTTGTTCTGTATGGTGTGTAGGCTGCCCCGGACGCAGTGTTCAGCACTGCAGTGACATCCTTACGACCCGAAGATGCGTTCGACCCCAATCGGGTGAAGTGCGTAGTGGATAATCGTGGTTACGCTATTTATTTCTCAAGAGGATTGATCCCTTTCAACAAGTACGATTTTCTTTTCAATCATGTGTTTCCCTTGTCGTACTCTTCGTTATCAACTTTAGACTTCCATTATAGATAACTTCCCGTGCTCGTGCTCGGGAAACTTAATGAGTTACATCAATTCATTTCATTGTTGCAGGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGGTATTAACGGAACGTATACGAGATTAGTTCATTATGTCGTAACGTCAGATTAAACAAACCTTCCTTTTCCTCTATTCTTCTTTCCAGAGCTTCGATTCGAAGTTTTTAAGTACGTATCCTGAACTCGAACCAACACCAATGCAACTAGAAGAGGATCTTGAACAGCTAAAAGTATTAGAACATGGCTACAAAATGAAGGTACGCACAGTTCATCTTCTAACATACCTACCATCTTTTCCCACTGTTGGAAATTCGTATACTCGAAAGATCTAGAACACAGCTTAGTACTCGTTCGATGGATTATCGAAAACGAAATTGTGTTTTCACCTGTGGAAACTGGCATTTTGTTTGGCAGGTGATTAAGGTTGACCATGAGGCTCATGGTGTTGATGTTCCTGAAGATGTAGAAAAGATAGAATCTTATATGAAGGAAAGGAACTTGTCTTAGAAAGCTATACGTTCGGGATTGATAACGATTTCGTTTTTAGTTTACGAGTTTGAAAAAGATTTGGTATTGAGTTGATGCAATTTTTTGTTTCTGATTTTTGGGTCATTTAGTTATTTGTAAAGTTAGTTTGATATATGTGA

mRNA sequence

GGAATCAACAGCCCAATTTCCGCATCAGTACCAAGCCCCTCTCATCGCGGGAGACCATGTCGGTTTGCTCTTCTTCTTCTTCTTCTTCCTCATTATCATCATCCGGGTACTTTGGCAGTGCCAAGGCCTGGATTGTGCATGGGATTGTTGCCGGAGTCGCCATTGGCGCCGCCATCGGAGCTCGAGCTTATTTGGGTCGATCCAACAAATTCCGTAGCCGCGTTGTCGGAATCATTCCCGCCCGTTTCGCCTCTTCGCGGTTCCAGGGGAAGCCTCTCGTTGAGATTCTTGGAAAACCCATGATCCAGAGAACATGGGAAAGGGCAAGAATGGCTACTACATTGGACTGTGTTGTTGTTGCAACCGATGATGCTAAGATTGCACAATGCTGTAAAGAATTTGGTGCTGATGTTGTAATGACATCAGAGTCGTGTAGGAACGGAACTGAGCGTTGTAATGAAGCGCTTCAAAAGCTTGAGAAGAAATACGATATCGTCGTAAACATTCAAGGGGATGAGCCCCTTATTGAACCGGACATCATCGATGGCATCGTTAAAGCTCTGCAGGCTGCCCCGGACGCAGTGTTCAGCACTGCAGTGACATCCTTACGACCCGAAGATGCGTTCGACCCCAATCGGGTGAAGTGCGTAGTGGATAATCGTGGTTACGCTATTTATTTCTCAAGAGGATTGATCCCTTTCAACAAGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGAGCTTCGATTCGAAGTTTTTAAGTACGTATCCTGAACTCGAACCAACACCAATGCAACTAGAAGAGGATCTTGAACAGCTAAAAGTATTAGAACATGGCTACAAAATGAAGGTGATTAAGGTTGACCATGAGGCTCATGGTGTTGATGTTCCTGAAGATGTAGAAAAGATAGAATCTTATATGAAGGAAAGGAACTTGTCTTAGAAAGCTATACGTTCGGGATTGATAACGATTTCGTTTTTAGTTTACGAGTTTGAAAAAGATTTGGTATTGAGTTGATGCAATTTTTTGTTTCTGATTTTTGGGTCATTTAGTTATTTGTAAAGTTAGTTTGATATATGTGA

Coding sequence (CDS)

ATGTCGGTTTGCTCTTCTTCTTCTTCTTCTTCCTCATTATCATCATCCGGGTACTTTGGCAGTGCCAAGGCCTGGATTGTGCATGGGATTGTTGCCGGAGTCGCCATTGGCGCCGCCATCGGAGCTCGAGCTTATTTGGGTCGATCCAACAAATTCCGTAGCCGCGTTGTCGGAATCATTCCCGCCCGTTTCGCCTCTTCGCGGTTCCAGGGGAAGCCTCTCGTTGAGATTCTTGGAAAACCCATGATCCAGAGAACATGGGAAAGGGCAAGAATGGCTACTACATTGGACTGTGTTGTTGTTGCAACCGATGATGCTAAGATTGCACAATGCTGTAAAGAATTTGGTGCTGATGTTGTAATGACATCAGAGTCGTGTAGGAACGGAACTGAGCGTTGTAATGAAGCGCTTCAAAAGCTTGAGAAGAAATACGATATCGTCGTAAACATTCAAGGGGATGAGCCCCTTATTGAACCGGACATCATCGATGGCATCGTTAAAGCTCTGCAGGCTGCCCCGGACGCAGTGTTCAGCACTGCAGTGACATCCTTACGACCCGAAGATGCGTTCGACCCCAATCGGGTGAAGTGCGTAGTGGATAATCGTGGTTACGCTATTTATTTCTCAAGAGGATTGATCCCTTTCAACAAGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGAGCTTCGATTCGAAGTTTTTAAGTACGTATCCTGAACTCGAACCAACACCAATGCAACTAGAAGAGGATCTTGAACAGCTAAAAGTATTAGAACATGGCTACAAAATGAAGGTGATTAAGGTTGACCATGAGGCTCATGGTGTTGATGTTCCTGAAGATGTAGAAAAGATAGAATCTTATATGAAGGAAAGGAACTTGTCTTAG

Protein sequence

MSVCSSSSSSSSLSSSGYFGSAKAWIVHGIVAGVAIGAAIGARAYLGRSNKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKFLSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNLS

Homology

[Close]

BLAST of Carg21079 vs. NCBI nr
Match: XP_022929209.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 543.1 bits (1398), Expect = 5.9e-151
Identity = 290/301 (96.35%), Postives = 290/301 (96.35%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS           YFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII
Sbjct: 1   MSVCSS--SSSSLSSSGYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV
Sbjct: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF
Sbjct: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL
Sbjct: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 299

Query: 301 S 302
           S
Sbjct: 301 S 299

[Close]

BLAST of Carg21079 vs. NCBI nr
Match: XP_023539187.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.0 bits (1338), Expect = 5.3e-144
Identity = 286/301 (95.02%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS   XXXXXXXXY GSAKAWIVHGXXXXXXXXXXXXXRAYLGRS KFRSRVVGII
Sbjct: 1   MSVCSS---XXXXXXXXYLGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSRKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PARFASSRFQGKPLVEILGKPMIQRTWERA+MATTLDCVVVATDDAKIAQCCK FGADVV
Sbjct: 61  PARFASSRFQGKPLVEILGKPMIQRTWERAKMATTLDCVVVATDDAKIAQCCKGFGADVV 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEP+IIDGIVKALQAAPDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+PEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF
Sbjct: 181 VTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           LS YPEL+ TP+QLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVP DVEKIES+MKERNL
Sbjct: 241 LSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGDVEKIESFMKERNL 298

Query: 301 S 302
           S
Sbjct: 301 S 298

[Close]

BLAST of Carg21079 vs. NCBI nr
Match: XP_022941614.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita moschata])

HSP 1 Score: 518.1 bits (1333), Expect = 2.0e-143
Identity = 285/301 (94.68%), Postives = 291/301 (96.68%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS   XXXXXXXXY GSAKAWIVHGXXXXXXXXXXXXXRAYLGRS KFRSRVVGII
Sbjct: 1   MSVCSS---XXXXXXXXYLGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSRKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PARFASSRFQGKPLVEILGKPMIQRTWERA+MATTLDCVVVATDDAKIAQCCK FGADVV
Sbjct: 61  PARFASSRFQGKPLVEILGKPMIQRTWERAKMATTLDCVVVATDDAKIAQCCKGFGADVV 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEP+IIDGIVKALQAAPDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+PEDAFDPNRVKCVVDN GYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF
Sbjct: 181 VTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           LS YPEL+ TP+QLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVP DVEKIES+MKERNL
Sbjct: 241 LSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGDVEKIESFMKERNL 298

Query: 301 S 302
           S
Sbjct: 301 S 298

[Close]

BLAST of Carg21079 vs. NCBI nr
Match: XP_004133708.1 (PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 2.2e-142
Identity = 268/301 (89.04%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS           Y GSAKAWIVHG   XXXXXXXX  R+YLGRS KFRSRVVGII
Sbjct: 1   MSVCSS----SSSSSSGYLGSAKAWIVHGIVAXXXXXXXXGARSYLGRSKKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PARFASSRF+GKPLVEILGKPMIQRTWERA+MATTLDCVVVATDDA+IAQCCK FGADVV
Sbjct: 61  PARFASSRFEGKPLVEILGKPMIQRTWERAKMATTLDCVVVATDDARIAQCCKGFGADVV 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEP+IIDGIVKALQAAPDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+PEDAFDPNRVKCVVD+RGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF
Sbjct: 181 VTSLKPEDAFDPNRVKCVVDSRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           LS YPELE TP+QLEEDLEQLKVLEHGYKMKVIKV+HEAHGVDVPEDV+KIES+MKERNL
Sbjct: 241 LSMYPELESTPLQLEEDLEQLKVLEHGYKMKVIKVEHEAHGVDVPEDVDKIESFMKERNL 297

Query: 301 S 302
           +
Sbjct: 301 A 297

[Close]

BLAST of Carg21079 vs. NCBI nr
Match: XP_022977606.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 514.6 bits (1324), Expect = 2.2e-142
Identity = 284/301 (94.35%), Postives = 290/301 (96.35%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS   XXXXXXXXY GSAKAWIVHGXXXXXXXXXXXXXRAYLGRS KFRSRVVGII
Sbjct: 1   MSVCSS---XXXXXXXXYLGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSGKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PARFASSRFQGKPLVEILGKPMIQRTWERA+MATTLDCVVVATDDAKIAQCCK FGADVV
Sbjct: 61  PARFASSRFQGKPLVEILGKPMIQRTWERAKMATTLDCVVVATDDAKIAQCCKGFGADVV 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEP+IIDGIVKALQAAPDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+ EDAFDPNRVKCVVDN GYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF
Sbjct: 181 VTSLKHEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           LS YPEL+ TP+QLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVP DVEKIES+MKERNL
Sbjct: 241 LSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGDVEKIESFMKERNL 298

Query: 301 S 302
           S
Sbjct: 301 S 298

[Close]

BLAST of Carg21079 vs. TAIR10
Match: AT1G53000.1 (Nucleotide-diphospho-sugar transferases superfamily protein)

HSP 1 Score: 464.9 bits (1195), Expect = 3.7e-131
Identity = 230/301 (76.41%), Postives = 256/301 (85.05%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS              S K WIV+G             RAYLGRS KFRSRVVGII
Sbjct: 1   MSVCSSSS-----------SSQKTWIVNGILAGTAIAAAIGARAYLGRSKKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PAR+ASSRF+GKPLV+ILGKPMIQRTWER+++ATTLD +VVATDD +IA+CC+ FGADV+
Sbjct: 61  PARYASSRFEGKPLVQILGKPMIQRTWERSKLATTLDHIVVATDDERIAECCRGFGADVI 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEAL+KLEKKYD+VVNIQGDEPLIEP+IIDG+VKALQ  PDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+PED  DPNRVKCVVDNRGYAIYFSRGLIP+NKSGKVN  +PY+LHLGIQSFDSKF
Sbjct: 181 VTSLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKSGKVNPDFPYMLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           L  Y EL+PTP+Q EEDLEQLKVLE+GYKMKVIKVDHEAHGVD P+DVEKIES M+ERN+
Sbjct: 241 LKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPDDVEKIESLMRERNM 290

Query: 301 S 302
           S
Sbjct: 301 S 290

[Close]

BLAST of Carg21079 vs. Swiss-Prot
Match: sp|Q9C920|KDSB_ARATH (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KDSB PE=1 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 6.7e-130
Identity = 230/301 (76.41%), Postives = 256/301 (85.05%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS              S K WIV+G             RAYLGRS KFRSRVVGII
Sbjct: 1   MSVCSSSS-----------SSQKTWIVNGILAGTAIAAAIGARAYLGRSKKFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PAR+ASSRF+GKPLV+ILGKPMIQRTWER+++ATTLD +VVATDD +IA+CC+ FGADV+
Sbjct: 61  PARYASSRFEGKPLVQILGKPMIQRTWERSKLATTLDHIVVATDDERIAECCRGFGADVI 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEAL+KLEKKYD+VVNIQGDEPLIEP+IIDG+VKALQ  PDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+PED  DPNRVKCVVDNRGYAIYFSRGLIP+NKSGKVN  +PY+LHLGIQSFDSKF
Sbjct: 181 VTSLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKSGKVNPDFPYMLHLGIQSFDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           L  Y EL+PTP+Q EEDLEQLKVLE+GYKMKVIKVDHEAHGVD P+DVEKIES M+ERN+
Sbjct: 241 LKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPDDVEKIESLMRERNM 290

Query: 301 S 302
           S
Sbjct: 301 S 290

[Close]

BLAST of Carg21079 vs. Swiss-Prot
Match: sp|Q9M4G3|KDSB_MAIZE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Zea mays OX=4577 GN=KDSB PE=1 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-113
Identity = 199/253 (78.66%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 48  RSNKFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAK 107
           R   FRSR VGIIPARFAS+RF+GKPLV ILGKPMIQRTWER  +A++LD VVVATDD +
Sbjct: 45  RPTGFRSRAVGIIPARFASTRFEGKPLVPILGKPMIQRTWERVMLASSLDHVVVATDDER 104

Query: 108 IAQCCKEFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVK 167
           IA+CC+ FGADV+MTS SC+NG+ERC EAL+KL+K YDIVVNIQGDEPLIEP+IIDG+V 
Sbjct: 105 IAECCRGFGADVIMTSASCKNGSERCCEALKKLDKHYDIVVNIQGDEPLIEPEIIDGVVM 164

Query: 168 ALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPY 227
           +LQ APDAVFSTAVTSL+PEDAFD NRVKCVVDN GYAIYFSRGLIPFNKSG  N +YPY
Sbjct: 165 SLQRAPDAVFSTAVTSLKPEDAFDTNRVKCVVDNLGYAIYFSRGLIPFNKSGNANPKYPY 224

Query: 228 LLHLGIQSFDSKFLSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPED 287
           LLHLGI  FDSKFL  YPEL PTP+Q+EEDLEQLKVLE+GY+MKVIKVDH+AHGVD PED
Sbjct: 225 LLHLGIAGFDSKFLKIYPELPPTPLQMEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPED 284

Query: 288 VEKIESYMKERNL 301
           VEKIE+ M+ RN+
Sbjct: 285 VEKIEALMRTRNI 297

[Close]

BLAST of Carg21079 vs. Swiss-Prot
Match: sp|Q6MD00|KDSB_PARUW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=kdsB PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-54
Identity = 117/248 (47.18%), Postives = 158/248 (63.71%), Query Frame = 0


Query: 55  RVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKE 114
           +++GIIPAR+ S+RF GKPL  ILGK ++QRT+E +  A+ L  ++VATDD +I +  + 
Sbjct: 9   QIIGIIPARYGSTRFPGKPLASILGKTLLQRTYENSLRASALSDLIVATDDERIFEHVRS 68

Query: 115 FGADVVMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPDIIDGIVKALQAA 174
           F   VVMTSE C  GT+R  E L    +      +VNIQGDEP + P  I+  V+AL   
Sbjct: 69  FNGKVVMTSEQCPTGTDRLAEVLSLYPEWMHATAIVNIQGDEPCLNPLTINLAVQALVND 128

Query: 175 PDAVFSTAVTS-LRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHL 234
           P    ST VT  L  E+A + + VKCV+D +G A+YFSR LIP NK+        Y  HL
Sbjct: 129 PQGQVSTIVTPLLDEEEAKNSSIVKCVMDQQGNALYFSRALIPSNKTNSFKNGAIYFRHL 188

Query: 235 GIQSFDSKFLSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKI 294
           G+  +   F+  Y +L  TP+QLEEDLEQLKVLEHGY++KV  VD    GVD PED+ K+
Sbjct: 189 GLYVYRPSFIINYQKLPSTPLQLEEDLEQLKVLEHGYRIKVAIVDQANIGVDTPEDIHKV 248

Query: 295 ESYMKERN 300
           E ++ ++N
Sbjct: 249 EEWLCKQN 256

[Close]

BLAST of Carg21079 vs. Swiss-Prot
Match: sp|Q9PKL1|KDSB_CHLMU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=kdsB PE=3 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 1.0e-53
Identity = 120/244 (49.18%), Postives = 155/244 (63.52%), Query Frame = 0


Query: 54  SRVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCK 113
           S+ VGI+PAR+ SSRF GKPL +ILGK +IQR++E A  + +LDCVVVATDD +I     
Sbjct: 7   SKRVGILPARWGSSRFPGKPLAKILGKTLIQRSYENALTSRSLDCVVVATDDQRIFDHVV 66

Query: 114 EFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAP 173
           EFG   VMT ESC NGTER  EA+ +   + +IVVNIQGDEP + P IIDG+V+ L+  P
Sbjct: 67  EFGGLCVMTCESCANGTERVEEAVSQHFPQAEIVVNIQGDEPCLSPSIIDGLVEMLEGNP 126

Query: 174 DAVFSTAVTSLRPEDAFDPN-RVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLG 233
               +T VT     DA   N +VKCV D  G A+YFSR +IP N         P  LH+G
Sbjct: 127 AIDIATPVTETVDPDAILTNHKVKCVFDKTGRALYFSRSVIPNN----FKRSTPIYLHIG 186

Query: 234 IQSFDSKFLSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDH-EAHGVDVPEDVEKI 293
           + +F   FLS Y ++ P+ + L EDLEQL+VLE G  + V  V +     VD PED+ K+
Sbjct: 187 VYAFRRAFLSEYVKIPPSSLSLAEDLEQLRVLESGRSIYVHVVQNATGPSVDYPEDISKV 246

Query: 294 ESYM 296
           E Y+
Sbjct: 247 EQYL 246

[Close]

BLAST of Carg21079 vs. Swiss-Prot
Match: sp|Q3KMI0|KDSB_CHLTA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13) OX=315277 GN=kdsB PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.6e-53
Identity = 116/244 (47.54%), Postives = 154/244 (63.11%), Query Frame = 0


Query: 54  SRVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCK 113
           S+ VGI+P+R+ SSRF GKPL +ILGK ++QR++E A  + +LDCVVVATDD +I     
Sbjct: 7   SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 66

Query: 114 EFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAP 173
           EFG   VMTS SC NGTER  E + +   + +IVVNIQGDEP + P +IDG+V  L+  P
Sbjct: 67  EFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNP 126

Query: 174 DAVFSTAVT-SLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLG 233
            A   T+VT +  PE     ++VKCV D  G A+YFSR  IP N         P  LH+G
Sbjct: 127 AADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIG 186

Query: 234 IQSFDSKFLSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDH-EAHGVDVPEDVEKI 293
           + +F   FLS Y ++ P+ + L EDLEQL+VLE G  + V  V +     VD PED+ K+
Sbjct: 187 VYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYVHVVQNATGPSVDYPEDITKV 246

Query: 294 ESYM 296
           E Y+
Sbjct: 247 EQYL 246

[Close]

BLAST of Carg21079 vs. TrEMBL
Match: tr|A0A1S3BUK4|A0A1S3BUK4_CUCME (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493332 PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.8e-141
Identity = 258/301 (85.71%), Postives = 270/301 (89.70%), Query Frame = 0


Query: 1   MSVCSSXXXXXXXXXXXYFGSAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGII 60
           MSVCSS           Y GSAKAWIVH              R+YLGRS +FRSRVVGII
Sbjct: 1   MSVCSS----SSSSSSGYLGSAKAWIVHSIVAGIAIGAAFGARSYLGRSKRFRSRVVGII 60

Query: 61  PARFASSRFQGKPLVEILGKPMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVV 120
           PARFASSRF+GKPLVEILGKPMIQRTWERA+MATTLDCVVVATDDAKIAQCCK FGADVV
Sbjct: 61  PARFASSRFEGKPLVEILGKPMIQRTWERAKMATTLDCVVVATDDAKIAQCCKGFGADVV 120

Query: 121 MTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTA 180
           MTSESCRNGTERCNEAL KLEKKYDIVVNIQGDEPLIEP+IIDGIVKALQAAPDAVFSTA
Sbjct: 121 MTSESCRNGTERCNEALHKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTA 180

Query: 181 VTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKF 240
           VTSL+ EDAFDPNRVKCVVD+RGYAIYFSRGLIPFNKSGKVNLQ+PYLLHLGIQS+DSKF
Sbjct: 181 VTSLKSEDAFDPNRVKCVVDSRGYAIYFSRGLIPFNKSGKVNLQFPYLLHLGIQSYDSKF 240

Query: 241 LSTYPELEPTPMQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNL 300
           LS YPELEPTP+QLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIES+MKERNL
Sbjct: 241 LSIYPELEPTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESFMKERNL 297

Query: 301 S 302
           +
Sbjct: 301 A 297

[Close]

BLAST of Carg21079 vs. TrEMBL
Match: tr|A0A2P4J953|A0A2P4J953_QUESU (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_29790 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.2e-131
Identity = 236/278 (84.89%), Postives = 252/278 (90.65%), Query Frame = 0


Query: 24  AWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGIIPARFASSRFQGKPLVEILGKPMI 83
           AWIVHG             RAYLGR  KFRSRV+GIIPARFASSRFQGKPLV ILGKPMI
Sbjct: 23  AWIVHGIVAGVAIAVAVGARAYLGRFGKFRSRVIGIIPARFASSRFQGKPLVHILGKPMI 82

Query: 84  QRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVVMTSESCRNGTERCNEALQKLEKK 143
           QRTWERA++A TLD +VVATDD KIA+CC+ FGA V+MTSESCRNGTERCNEALQKLEKK
Sbjct: 83  QRTWERAKLAATLDHIVVATDDDKIAECCRGFGAHVIMTSESCRNGTERCNEALQKLEKK 142

Query: 144 YDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVDNRG 203
           YDIVVNIQGDEPLIEP+IIDG+VKALQAAPDAVFSTAVTSL PEDAFDPNRVKCVVDNRG
Sbjct: 143 YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLNPEDAFDPNRVKCVVDNRG 202

Query: 204 YAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKFLSTYPELEPTPMQLEEDLEQLKV 263
           YAIYFSRGLIPFNKSG+VN Q+PYLLHLGIQS+DSKFL  YPEL+PTP+QLEEDLEQLKV
Sbjct: 203 YAIYFSRGLIPFNKSGEVNPQFPYLLHLGIQSYDSKFLKIYPELQPTPLQLEEDLEQLKV 262

Query: 264 LEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNLS 302
           LE+GYKMKVIKVDHEAHGVD PEDVEKIESYM+ERNLS
Sbjct: 263 LENGYKMKVIKVDHEAHGVDTPEDVEKIESYMRERNLS 300

[Close]

BLAST of Carg21079 vs. TrEMBL
Match: tr|V4ULN1|V4ULN1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009061mg PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.6e-131
Identity = 234/281 (83.27%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 21  SAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGIIPARFASSRFQGKPLVEILGK 80
           S K+WIVHG             RAYLGRS  FRSRVVGIIPARFASSRF+GKPLV ILGK
Sbjct: 15  STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74

Query: 81  PMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVVMTSESCRNGTERCNEALQKL 140
           PMIQRTWER+++ATTLD +VVATDD KIA+CC++FGADV+MTSESCRNGTERCNEALQKL
Sbjct: 75  PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134

Query: 141 EKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVD 200
           EKKYDIVVNIQGDEPLIEP+IIDG+VKALQAAPDAVFSTAVTSL+PEDAFDPNRVKCVVD
Sbjct: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194

Query: 201 NRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKFLSTYPELEPTPMQLEEDLEQ 260
           N GYAIYFSRGLIP+NKSGKVN Q+PYLLHLGIQS+DS FL  YP L PTP+QLEEDLEQ
Sbjct: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254

Query: 261 LKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNLS 302
           LKVLE+GYKMKVIKVDHEAHGVD PEDVEKIES+M+ERNLS
Sbjct: 255 LKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295

[Close]

BLAST of Carg21079 vs. TrEMBL
Match: tr|A0A2H5PVN5|A0A2H5PVN5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_169440 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.6e-131
Identity = 234/281 (83.27%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 21  SAKAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGIIPARFASSRFQGKPLVEILGK 80
           S K+WIVHG             RAYLGRS  FRSRVVGIIPARFASSRF+GKPLV ILGK
Sbjct: 15  STKSWIVHGIVAGAAIAVAVGARAYLGRSKNFRSRVVGIIPARFASSRFEGKPLVNILGK 74

Query: 81  PMIQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVVMTSESCRNGTERCNEALQKL 140
           PMIQRTWER+++ATTLD +VVATDD KIA+CC++FGADV+MTSESCRNGTERCNEALQKL
Sbjct: 75  PMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKL 134

Query: 141 EKKYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVD 200
           EKKYDIVVNIQGDEPLIEP+IIDG+VKALQAAPDAVFSTAVTSL+PEDAFDPNRVKCVVD
Sbjct: 135 EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVD 194

Query: 201 NRGYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKFLSTYPELEPTPMQLEEDLEQ 260
           N GYAIYFSRGLIP+NKSGKVN Q+PYLLHLGIQS+DS FL  YP L PTP+QLEEDLEQ
Sbjct: 195 NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQ 254

Query: 261 LKVLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNLS 302
           LKVLE+GYKMKVIKVDHEAHGVD PEDVEKIES+M+ERNLS
Sbjct: 255 LKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNLS 295

[Close]

BLAST of Carg21079 vs. TrEMBL
Match: tr|A0A2I4H2L2|A0A2I4H2L2_9ROSI (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Juglans regia OX=51240 GN=LOC109012948 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 7.7e-131
Identity = 234/279 (83.87%), Postives = 253/279 (90.68%), Query Frame = 0


Query: 23  KAWIVHGXXXXXXXXXXXXXRAYLGRSNKFRSRVVGIIPARFASSRFQGKPLVEILGKPM 82
           KAWIVHG             RA+L RS KFRSRVVGIIPARFASSRF+GKPLV ILGKPM
Sbjct: 25  KAWIVHGIVAGVSIVVALGARAFLSRSGKFRSRVVGIIPARFASSRFEGKPLVHILGKPM 84

Query: 83  IQRTWERARMATTLDCVVVATDDAKIAQCCKEFGADVVMTSESCRNGTERCNEALQKLEK 142
           IQRTWERA++AT LD +VVATDD KIA+CC+ FGADV+MTSESCRNGTERCNEALQKLEK
Sbjct: 85  IQRTWERAKLATLLDHIVVATDDDKIAECCRGFGADVIMTSESCRNGTERCNEALQKLEK 144

Query: 143 KYDIVVNIQGDEPLIEPDIIDGIVKALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVDNR 202
           KYDIVVNIQGDEPLIEP+IIDG+VKALQAAPDAVFSTAVTSL+ EDAFDPNRVKCVVDN+
Sbjct: 145 KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKAEDAFDPNRVKCVVDNQ 204

Query: 203 GYAIYFSRGLIPFNKSGKVNLQYPYLLHLGIQSFDSKFLSTYPELEPTPMQLEEDLEQLK 262
           GYAIYFSRGLIP NKSGKVNL +PY+LHLGIQS+DSKFL  YPEL+PTP+QLEEDLEQLK
Sbjct: 205 GYAIYFSRGLIPHNKSGKVNLHFPYMLHLGIQSYDSKFLKIYPELQPTPLQLEEDLEQLK 264

Query: 263 VLEHGYKMKVIKVDHEAHGVDVPEDVEKIESYMKERNLS 302
           VLE+GYKMKVIKVDHEAHGVD PEDVEKIESYM+ERNLS
Sbjct: 265 VLENGYKMKVIKVDHEAHGVDTPEDVEKIESYMRERNLS 303

The following BLAST results are available for this feature:

BLAST of Carg21079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929209.1	5.9e-151	96.35	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita m...	[more]
XP_023539187.1	5.3e-144	95.02	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita pepo s...	[more]
XP_022941614.1	2.0e-143	94.68	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita moscha...	[more]
XP_004133708.1	2.2e-142	89.04	PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucum...	[more]
XP_022977606.1	2.2e-142	94.35	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita m...	[more]

BLAST of Carg21079 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53000.1	3.7e-131	76.41	Nucleotide-diphospho-sugar transferases superfamily protein	[more]

BLAST of Carg21079 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C920\|KDSB_ARATH	6.7e-130	76.41	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Arabidopsis th...	[more]
sp\|Q9M4G3\|KDSB_MAIZE	1.5e-113	78.66	3-deoxy-manno-octulosonate cytidylyltransferase OS=Zea mays OX=4577 GN=KDSB PE=1...	[more]
sp\|Q6MD00\|KDSB_PARUW	2.1e-54	47.18	3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (s...	[more]
sp\|Q9PKL1\|KDSB_CHLMU	1.0e-53	49.18	3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia muridarum (strain M...	[more]
sp\|Q3KMI0\|KDSB_CHLTA	6.6e-53	47.54	3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis serovar...	[more]

BLAST of Carg21079 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUK4\|A0A1S3BUK4_CUCME	2.8e-141	85.71	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Cucumis melo O...	[more]
tr\|A0A2P4J953\|A0A2P4J953_QUESU	1.2e-131	84.89	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Quercus suber ...	[more]
tr\|V4ULN1\|V4ULN1_9ROSI	2.6e-131	83.27	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009061mg PE=3 ...	[more]
tr\|A0A2H5PVN5\|A0A2H5PVN5_CITUN	2.6e-131	83.27	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_169440 PE=3 SV=1	[more]
tr\|A0A2I4H2L2\|A0A2I4H2L2_9ROSI	7.7e-131	83.87	3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Juglans regia ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008690	3-deoxy-manno-octulosonate cytidylyltransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR003329	Cytidylyl_trans
IPR004528	KdsB
IPR029044	Nucleotide-diphossugar_trans

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009103	lipopolysaccharide biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008690	3-deoxy-manno-octulosonate cytidylyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21079-RA	Carg21079-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	G3DSA:3.90.550.10		coord: 47..296 e-value: 1.0E-84 score: 285.9
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	SSF53448	Nucleotide-diphospho-sugar transferases	coord: 56..298
IPR004528	3-deoxy-D-manno-octulosonate cytidylyltransferase	TIGRFAM	TIGR00466	TIGR00466	coord: 58..289 e-value: 3.3E-67 score: 224.4
IPR004528	3-deoxy-D-manno-octulosonate cytidylyltransferase	HAMAP	MF_00057	KdsB	coord: 54..296 score: 36.558
IPR004528	3-deoxy-D-manno-octulosonate cytidylyltransferase	CDD	cd02517	CMP-KDO-Synthetase	coord: 55..294 e-value: 3.8136E-132 score: 377.199
IPR003329	Acylneuraminate cytidylyltransferase	PFAM	PF02348	CTP_transf_3	coord: 58..267 e-value: 2.2E-55 score: 187.9
None	No IPR available	PANTHER	PTHR42866	FAMILY NOT NAMED	coord: 50..298
None	No IPR available	PANTHER	PTHR42866:SF2	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL	coord: 50..298

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21079	Cla011787	Watermelon (97103) v1	carwmB0469
Carg21079	Csa3G104930	Cucumber (Chinese Long) v2	carcuB0504
Carg21079	MELO3C016515	Melon (DHL92) v3.5.1	carmeB0478
Carg21079	ClCG10G006920	Watermelon (Charleston Gray)	carwcgB0459
Carg21079	CSPI03G06160	Wild cucumber (PI 183967)	carcpiB0512
Carg21079	Cucsa.074750	Cucumber (Gy14) v1	carcgyB0545
Carg21079	CmaCh04G009050	Cucurbita maxima (Rimu)	carcmaB0662
Carg21079	CmaCh16G007810	Cucurbita maxima (Rimu)	carcmaB0660
Carg21079	CmoCh04G009710	Cucurbita moschata (Rifu)	carcmoB0645
Carg21079	CmoCh16G008440	Cucurbita moschata (Rifu)	carcmoB0642
Carg21079	Lsi05G007160	Bottle gourd (USVL1VR-Ls)	carlsiB432
Carg21079	Cp4.1LG14g00330	Cucurbita pepo (Zucchini)	carcpeB0666
Carg21079	Cp4.1LG01g08600	Cucurbita pepo (Zucchini)	carcpeB0667
Carg21079	CsGy3G006260	Cucumber (Gy14) v2	carcgybB0481
Carg21079	MELO3C016515.2	Melon (DHL92) v3.6.1	carmedB0482
Carg21079	CsaV3_3G006290	Cucumber (Chinese Long) v3	carcucB0509
Carg21079	Cla97C10G190780	Watermelon (97103) v2	carwmbB0498

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21079	Carg00023	Silver-seed gourd	carcarB468

The following block(s) are covering this gene:

None