Carg21005 (gene) Silver-seed gourd

Overview
NameCarg21005
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box/kelch-repeat protein SKIP4-like
LocationCucurbita_argyrosperma_scaffold_170 : 303839 .. 306342 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGTGTTTTAGGTCCAAGTGGTTTTGAAGAATGGATCCCGCCGACAGGGCGATTGCTGATACCTGGGCTGCCAGATGACATTGTTCTTTCTATCCTCTCAAGGGTTCCTCGAAAATACCATCATAATCTGAAATCTGTCTCAAAGAGATGGAAGGATCTTGTGAACAGCGAAGAGTGGTATTCATGCCGTGAAAAGAATGATCTTGCTGAGACTTGGATCTATGCTTTGTGTAGAGACAAGTCTGAACAAGTTTCGTGTTATGTGTTGGATCTTAACTCATCAAAAAGGCGTTGGAAACAGATGAAGAGTTTACCATCTTGCAGCTTTAAGAGGAAGGGTATGGGGTTTGAAGCAATGGGAAGGAAGCTTTACTTATTAGGTGGTTGCAGTTGGTCTGAAGATGCTACTGATGAAGTTTACTGCTATGATACTTCCACAAATAGCTGGAGTTCAGTTGCGCCATTGTCATCTGCTAGGTAATGATTATCTACACATACCCTTAGACAATAATAATGATTTACGTTCAAAAAAAAGGTACAAAGTGAATATGTTTCTAAATTTCTGGAGGGAAGACTTAATAGAGACAGTTCTTTTGGTAAAATTTAAAGCATAAACTCATAGTATTGTGATATCCCACGTTGGTTGGGGAGGAGAACGAAAAACTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTCGCTAGCGGTGGGCTTGGGCCTGGGCCGTTGCAAATGGTATCAGAGCCAGACACCGGGCGATGTGCTAGCGAGGAAGTTGTTCCCCGAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGAATGTTGGGCTTTGAAGGGGGTGGATTTGGTGGGGGTCCCACACCAATTGGAGAAAGGAACGAGTGTCAACGAGGACGCTGGGCTCTGAAGGGGGGTGGATTGTGATATCCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTTTCCCTAACAAACGCGTTTTAGAGCCTTGAGGGAAAGCTCGAAAAGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATTTGGGCCGTTACCAGTCTAGATGAATCTTATAGTTTGTTGTGAATGTAAAGACTAAATTTGAGATTGCAATAAAACAAGTCCGGAAGTATATAGATTGAAAATATTATATTAACCTTTCGGTTTCTTGTAGCATCTCACAAAGAAGTTGCAACATATTTGCCTATGCACAACTTTATGAAGTTTACCTTAATGCTTGTATCATCATCATCATATACAGGTGCTACTTTGTTTGTGAAGTCTTAAATGAAAAGCTTTATGCCATTGGGGGCTTATGTTCCAATTCAGGTGATCGACATTCTTGGGACATATATGACCCATGCACCAACAAATGGGAACCTTGCTTGGACATTACAAATATTCAGAACGAAATTGAAGGTTCGATTGTGATGGATGGAAAGATTTATATTCGTCAACGTCATGTGGACTCTCAAGCTTATGCTCTGGTTTACGACCCATCGAGTGGAACGTGGGAGCACAGTGACTCAGAAATGGTTTCGGGATGGCGAGGTCCAGCGGTTATTGTAGACAAAACTCTTTATGTTTTGGATCAAAGTTCTGGAACCAGATTGATGATGTGGAACAATGAAGTCAAGGAATGGATTCCAGTGGGGAGATTTTCTGCCCTTCTAACGAGACCGCCATGTCAACTCGTCGCTGTCGGGAAAAGAATCGTCGTCGTGGGGAAGGGACTCAGCAGTGTCATCTTTAATGTTGACAACGCAAGGACTATGGAAGGGTTGATGGTGAGTTCCTCTATACCAAGATTAGATTCTGATGTTGATGTACTTTCCTGTAAATGTGTAACAATTTAAGCTGCCACCACCTGATAGACAAACTTGCACTCATGCAATACCATAATGTATATACTCTTTCAATGAAATATTGGAGAATTGATACTTTGTTAATGTTCTCTTATCAATATATACAAGTTCTTGTTCCTATCACTATAATCGCAGGAAAGTTACATTTTTTAGGTTCGTAAATGATATCGATAATTGCAAGCTGCGTCGTGTGAAACAAATAGGAGTAGAACTTTAGAGAAGTTGAAGGAATAGGCATAAAACTTCCTATTTCAGTATTTCAAGAACTTTATACAGCAACAGATGGAAAACTATTGTCTTCAATAACGTTATAGACAGGAGGTTATGTTACATGCCAGGAAGCAAATGGTTGAGAAATCAGCCCTTTCGACAACAGAATGTAAAGATCGGTACACTACACGTCTAACTTGATAACCGTACTACACTCGAGACTCGCTTGTAAAGTAACAGCCAGGTATGAGTTAAATTCAGCTAGTTTTTTTCCTTTTGAATGCAGGATGAATGACCCCATTATAAGAAGCCAAATTGTCAATAGTTGAAATACAGTCTTTCATC

mRNA sequence

ATGGACAGTGTTTTAGGTCCAAGTGGTTTTGAAGAATGGATCCCGCCGACAGGGCGATTGCTGATACCTGGGCTGCCAGATGACATTGTTCTTTCTATCCTCTCAAGGGTTCCTCGAAAATACCATCATAATCTGAAATCTGTCTCAAAGAGATGGAAGGATCTTGTGAACAGCGAAGAGTGGTATTCATGCCGTGAAAAGAATGATCTTGCTGAGACTTGGATCTATGCTTTGTGTAGAGACAAGTCTGAACAAGTTTCGTGTTATGTGTTGGATCTTAACTCATCAAAAAGGCGTTGGAAACAGATGAAGAGTTTACCATCTTGCAGCTTTAAGAGGAAGGGTATGGGGTTTGAAGCAATGGGAAGGAAGCTTTACTTATTAGGTGGTTGCAGTTGGTCTGAAGATGCTACTGATGAAGTTTACTGCTATGATACTTCCACAAATAGCTGGAGTTCAGTTGCGCCATTGTCATCTGCTAGGTGCTACTTTGTTTGTGAAGTCTTAAATGAAAAGCTTTATGCCATTGGGGGCTTATGTTCCAATTCAGGTGATCGACATTCTTGGGACATATATGACCCATGCACCAACAAATGGGAACCTTGCTTGGACATTACAAATATTCAGAACGAAATTGAAGGTTCGATTGTGATGGATGGAAAGATTTATATTCGTCAACGTCATGTGGACTCTCAAGCTTATGCTCTGGTTTACGACCCATCGAGTGGAACGTGGGAGCACAGTGACTCAGAAATGGTTTCGGGATGGCGAGGTCCAGCGGTTATTGTAGACAAAACTCTTTATGTTTTGGATCAAAGTTCTGGAACCAGATTGATGATGTGGAACAATGAAGTCAAGGAATGGATTCCAGTGGGGAGATTTTCTGCCCTTCTAACGAGACCGCCATGTCAACTCGTCGCTGTCGGGAAAAGAATCGTCGTCGTGGGGAAGGGACTCAGCAGTGTCATCTTTAATGTTGACAACGCAAGGACTATGGAAGGGTTGATGGTGAGTTCCTCTATACCAAGATTAGATTCTGATGTTGATGTACTTTCCTGTAAATGTGTAACAATTTAAGCTGCCACCACCTGATAGACAAACTTGCACTCATGCAATACCATAATGTATATACTCTTTCAATGAAATATTGGAGAATTGATACTTTGTTAATGTTCTCTTATCAATATATACAAGTTCTTGTTCCTATCACTATAATCGCAGGAAAGTTACATTTTTTAGGTTCGTAAATGATATCGATAATTGCAAGCTGCGTCGTGTGAAACAAATAGGAGTAGAACTTTAGAGAAGTTGAAGGAATAGGCATAAAACTTCCTATTTCAGTATTTCAAGAACTTTATACAGCAACAGATGGAAAACTATTGTCTTCAATAACGTTATAGACAGGAGGTTATGTTACATGCCAGGAAGCAAATGGTTGAGAAATCAGCCCTTTCGACAACAGAATGTAAAGATCGGTACACTACACGTCTAACTTGATAACCGTACTACACTCGAGACTCGCTTGTAAAGTAACAGCCAGGTATGAGTTAAATTCAGCTAGTTTTTTTCCTTTTGAATGCAGGATGAATGACCCCATTATAAGAAGCCAAATTGTCAATAGTTGAAATACAGTCTTTCATC

Coding sequence (CDS)

ATGGACAGTGTTTTAGGTCCAAGTGGTTTTGAAGAATGGATCCCGCCGACAGGGCGATTGCTGATACCTGGGCTGCCAGATGACATTGTTCTTTCTATCCTCTCAAGGGTTCCTCGAAAATACCATCATAATCTGAAATCTGTCTCAAAGAGATGGAAGGATCTTGTGAACAGCGAAGAGTGGTATTCATGCCGTGAAAAGAATGATCTTGCTGAGACTTGGATCTATGCTTTGTGTAGAGACAAGTCTGAACAAGTTTCGTGTTATGTGTTGGATCTTAACTCATCAAAAAGGCGTTGGAAACAGATGAAGAGTTTACCATCTTGCAGCTTTAAGAGGAAGGGTATGGGGTTTGAAGCAATGGGAAGGAAGCTTTACTTATTAGGTGGTTGCAGTTGGTCTGAAGATGCTACTGATGAAGTTTACTGCTATGATACTTCCACAAATAGCTGGAGTTCAGTTGCGCCATTGTCATCTGCTAGGTGCTACTTTGTTTGTGAAGTCTTAAATGAAAAGCTTTATGCCATTGGGGGCTTATGTTCCAATTCAGGTGATCGACATTCTTGGGACATATATGACCCATGCACCAACAAATGGGAACCTTGCTTGGACATTACAAATATTCAGAACGAAATTGAAGGTTCGATTGTGATGGATGGAAAGATTTATATTCGTCAACGTCATGTGGACTCTCAAGCTTATGCTCTGGTTTACGACCCATCGAGTGGAACGTGGGAGCACAGTGACTCAGAAATGGTTTCGGGATGGCGAGGTCCAGCGGTTATTGTAGACAAAACTCTTTATGTTTTGGATCAAAGTTCTGGAACCAGATTGATGATGTGGAACAATGAAGTCAAGGAATGGATTCCAGTGGGGAGATTTTCTGCCCTTCTAACGAGACCGCCATGTCAACTCGTCGCTGTCGGGAAAAGAATCGTCGTCGTGGGGAAGGGACTCAGCAGTGTCATCTTTAATGTTGACAACGCAAGGACTATGGAAGGGTTGATGGTGAGTTCCTCTATACCAAGATTAGATTCTGATGTTGATGTACTTTCCTGTAAATGTGTAACAATTTAA

Protein sequence

MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAMGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCEVLNEKLYAIGGLCSNSGDRHSWDIYDPCTNKWEPCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDPSSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTRPPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI
Homology
[Close]
BLAST of Carg21005 vs. NCBI nr
Match: XP_023526215.1 (F-box/kelch-repeat protein SKIP4 [Cucurbita pepo subsp. pepo] >XP_023526216.1 F-box/kelch-repeat protein SKIP4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634.0 bits (1634), Expect = 3.0e-178
Identity = 350/358 (97.77%), Postives = 351/358 (98.04%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MDSVLGPSG EE +PPTGR LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE
Sbjct: 1   MDSVLGPSGLEELVPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYF  XXXXXXXXXXXXXX
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDP 240
           XXXXXXXXXXXXXXXXXXXXXCLDITNI NEIEGSIVMDGKIYIRQR VDSQAYALVYDP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIPNEIEGSIVMDGKIYIRQRSVDSQAYALVYDP 240

Query: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300
           SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI
Sbjct: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 358

[Close]
BLAST of Carg21005 vs. NCBI nr
Match: XP_022924533.1 (F-box/kelch-repeat protein SKIP4 [Cucurbita moschata] >XP_022924534.1 F-box/kelch-repeat protein SKIP4 [Cucurbita moschata] >XP_022924535.1 F-box/kelch-repeat protein SKIP4 [Cucurbita moschata] >XP_022924536.1 F-box/kelch-repeat protein SKIP4 [Cucurbita moschata])

HSP 1 Score: 633.3 bits (1632), Expect = 5.2e-178
Identity = 351/358 (98.04%), Postives = 351/358 (98.04%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MDSVLGPSGFEE IPPTGR LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE
Sbjct: 1   MDSVLGPSGFEELIPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYF  XXXXXXXXXXXXXX
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDP 240
           XXXXXXXXXXXXXXXXXXXXX LDITNIQNEIE SIVMDGKIYIRQRHVDSQAYALVYDP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXLDITNIQNEIESSIVMDGKIYIRQRHVDSQAYALVYDP 240

Query: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300
           SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           PPCQLVAVGK IVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI
Sbjct: 301 PPCQLVAVGKIIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 358

[Close]
BLAST of Carg21005 vs. NCBI nr
Match: XP_022980337.1 (F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980338.1 F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980339.1 F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980340.1 F-box/kelch-repeat protein SKIP4 [Cucurbita maxima])

HSP 1 Score: 632.1 bits (1629), Expect = 1.1e-177
Identity = 350/358 (97.77%), Postives = 351/358 (98.04%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MDSVLGPSG EE IPPTGR LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE
Sbjct: 1   MDSVLGPSGLEELIPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYF  XXXXXXXXXXXXXX
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDP 240
           XXXXXXXXXXXXXXXXXXXXX LDITNIQNEIEGSIVMDGKIYIRQR VDSQAYALVYDP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXLDITNIQNEIEGSIVMDGKIYIRQRSVDSQAYALVYDP 240

Query: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300
           SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVT+
Sbjct: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTL 358

[Close]
BLAST of Carg21005 vs. NCBI nr
Match: XP_008438055.1 (PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis melo])

HSP 1 Score: 570.9 bits (1470), Expect = 3.1e-159
Identity = 281/358 (78.49%), Postives = 296/358 (82.68%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MD+VLG +  EE  PP GR LI  LPDDI LSILSR+PRKYH NLK VS RWKDLVNS+E
Sbjct: 1   MDNVLGSNSLEELTPPPGRSLIHSLPDDIALSILSRIPRKYHQNLKCVSNRWKDLVNSQE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WY+CREKN+LAETWIYALCRDKSEQ+SCYVLDLNSSKR WKQMK LP+CSFKRKGMGFEA
Sbjct: 61  WYACREKNNLAETWIYALCRDKSEQLSCYVLDLNSSKRCWKQMKCLPTCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MGRKLY+LGGCSWSEDATDEVYCYDTS NSWS VAPLSSARCYF C              
Sbjct: 121 MGRKLYVLGGCSWSEDATDEVYCYDTSINSWSPVAPLSSARCYFACEVLNGKLYTMGGLC 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDP 240
                                 LD TNIQNEIEGSIVMDGKIYIR R VDSQ YALVYDP
Sbjct: 181 PSSGDRHSWDVYDPCTNTWESHLDNTNIQNEIEGSIVMDGKIYIRLRSVDSQVYALVYDP 240

Query: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300
           SSGTW+HSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNE KEWIPVGRFSALLTR
Sbjct: 241 SSGTWQHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKEWIPVGRFSALLTR 300

Query: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           PPCQLVAVG++IVVVGKGLSSVIF+V N RTMEGLMVSSSIPR DSD+DVLSCKC+TI
Sbjct: 301 PPCQLVAVGRKIVVVGKGLSSVIFDVSNVRTMEGLMVSSSIPRSDSDIDVLSCKCITI 358

[Close]
BLAST of Carg21005 vs. NCBI nr
Match: XP_022147528.1 (F-box/kelch-repeat protein SKIP4 [Momordica charantia] >XP_022147529.1 F-box/kelch-repeat protein SKIP4 [Momordica charantia])

HSP 1 Score: 553.1 bits (1424), Expect = 6.8e-154
Identity = 274/359 (76.32%), Postives = 296/359 (82.45%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MDSVLG +  EE I P GR L+PGLPDDI LSILSR+PRKYHHNLK VSKRWKDL++SEE
Sbjct: 1   MDSVLGSNSLEEPIQPPGRSLLPGLPDDIALSILSRIPRKYHHNLKCVSKRWKDLLSSEE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WYSCREKN LAETWIYALCRDKSE+VSCYVLDLNSSKR WK+MKSLP+CSFKRKGMGFEA
Sbjct: 61  WYSCREKNHLAETWIYALCRDKSERVSCYVLDLNSSKRCWKRMKSLPTCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MG+KLYLLGGCSWSEDATDEVYCYDTS NSW  VAPLSSARCYF C              
Sbjct: 121 MGKKLYLLGGCSWSEDATDEVYCYDTSKNSWIKVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIR-QRHVDSQAYALVYD 240
                                 LD  NIQNEIE SIVMDGKIY+R    VDSQAYA+VY+
Sbjct: 181 SNSGDPQSWDVYDPCSNTWESHLD-KNIQNEIESSIVMDGKIYVRLHSSVDSQAYAMVYE 240

Query: 241 PSSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLT 300
           PSSG W+ SDSEMVSGWRGPAVIVD+TLYVLDQSSGTRLMMW+NE KEW+PVGRFSALLT
Sbjct: 241 PSSGMWQRSDSEMVSGWRGPAVIVDETLYVLDQSSGTRLMMWSNEDKEWLPVGRFSALLT 300

Query: 301 RPPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           RPPCQLVAVG+RIVVVGKGLSSVIF+V N RTMEG+MVSSSIPRLDSD+DVL+CKC+TI
Sbjct: 301 RPPCQLVAVGRRIVVVGKGLSSVIFDVSNGRTMEGVMVSSSIPRLDSDIDVLACKCITI 358

[Close]
BLAST of Carg21005 vs. TAIR10
Match: AT3G61350.1 (SKP1 interacting partner 4)

HSP 1 Score: 297.7 bits (761), Expect = 9.3e-81
Identity = 158/342 (46.20%), Postives = 209/342 (61.11%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LI G+PDDI  S L+RVPR+YH  +K VS+RW+D V S+E    R + +LAE+WIYALCR
Sbjct: 21  LISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEFNLAESWIYALCR 80

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAMGRKLYLLGGCSWSEDATDE 140
           D S  V  ++L+  SS+R WK++   P     R+GMGF  +G++L++LGGC W EDATDE
Sbjct: 81  DISGGVFLHMLNPFSSRRSWKRINDYPYIPM-REGMGFAVLGKRLFVLGGCGWLEDATDE 140

Query: 141 VYCYDTSTNSWSSVA-PLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
           +YCYD + N+W  V  PLS+ RCYF C                                 
Sbjct: 141 IYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGLNPNAKRTWDIYDPLTRTC 200

Query: 201 XXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDPSSGTWEHSDSEMVSGWRGP 260
             C D+ NI  E+E S VMDG+IYIR     S     VY  SSG WE  D +M SGWRGP
Sbjct: 201 KSCSDV-NIVPEMEDSFVMDGRIYIRGGVGGSS--TAVYSASSGIWERMDDDMASGWRGP 260

Query: 261 AVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTRPPCQLVAVGKRIVVVGKGL 320
           AV+V   LYVLDQ+ G +L MW  + + WI +G+ S L+ + PC+LV++G  I V+GK  
Sbjct: 261 AVVVAGDLYVLDQTFGAKLTMWCKDTRMWIHIGKLSQLVMKQPCRLVSIGNSIFVIGKDC 320

Query: 321 SSVIFNVDNAR--TMEGLMVSSSIPRL-DSDVDVLSCKCVTI 359
           S+V+ +V+N R   M G+MV SSIP+  D D+DV+SCK V I
Sbjct: 321 STVVIDVENVRKNKMNGVMVCSSIPKTWDDDIDVISCKSVAI 358

[Close]
BLAST of Carg21005 vs. TAIR10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-15
Identity = 104/313 (33.23%), Postives = 149/313 (47.60%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           L+PGLPDD+ ++ L RVPR  H  L+ V KRW  L +   +YS R+   ++E W+Y   R
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAM-GRKLYLLGGCSWSEDATD 140
           D+  ++S    D  S  + W+ +  +P    +  G G   + G  LYL GG      +  
Sbjct: 138 DRDGKISWNTFDPIS--QLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMR 197

Query: 141 EVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
            V  Y+  TN W     +   R +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 198 RVIFYNARTNKWHRAPDMLRKRHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 257

Query: 201 XXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDPSSGTWEHSDSEMVSGWRGP 260
           XX     +        +V D K +++                          MV+GWR P
Sbjct: 258 XXXXXXXSTAMVPLIGVVYDKKWFLKGLGSHQLVMXXXXXXXXXXXXXXXXGMVAGWRNP 317

Query: 261 AVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALL----TRPPCQLVAVGKRIVVV 320
              ++  LY LD   G +L +++     W       A L    +     LV +  ++ ++
Sbjct: 318 CTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALVPLHNKLCII 377

Query: 321 GKGLSSVIFNVDN 329
              +S  + +V N
Sbjct: 378 RNNMSMSLVDVSN 388

[Close]
BLAST of Carg21005 vs. TAIR10
Match: AT1G30090.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 6.8e-15
Identity = 79/338 (23.37%), Postives = 138/338 (40.83%), Query Frame = 0 

Query: 18  GRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE-WYSCREKNDLAETWIY 77
           G  LIPGLPDD+ L+ L RVP + H + KSV KRW  L  ++E +++ R++    + W++
Sbjct: 50  GEPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLF 109

Query: 78  ALCRDK-SEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAMGR----KLYLLGG- 137
            +   + + ++   VLDL +    W ++ ++P C  K    GF ++       +++ GG 
Sbjct: 110 VVGFSRCTGKIQWKVLDLRN--LTWHEIPAMP-CRDKVCPHGFRSVSMPREGTMFVCGGM 169

Query: 138 CSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXX 197
            S S+   D V  YD   N W+    + +AR +F                          
Sbjct: 170 VSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYE----- 229

Query: 198 XXXXXXXXXXXCLDITNIQNEIEG----------------SIVMDGKIYIRQRHV---DS 257
                       LD   + N ++G                + V++GK+ + +  +     
Sbjct: 230 ------------LDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFV 289

Query: 258 QAYALVYDPSSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPV 317
                VYDP +  WE     +  GW G +V++   L+++ +    R+ M           
Sbjct: 290 SPRGQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELE--RMKMXXXXXXXXXXX 349

Query: 318 GRFSALLTRPPCQLVAV---GKRIVVVGKGLSSVIFNV 327
                 L    C+  AV   G R+ VVG+ L   + N+
Sbjct: 350 XXNGPELPEQICRPFAVNCYGNRVYVVGRNLHLAVGNI 365

[Close]
BLAST of Carg21005 vs. TAIR10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-14
Identity = 51/157 (32.48%), Postives = 74/157 (47.13%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LIPGLPDD+    L+ VPR    ++ SV K+W+ +V S+E+ + R    + E W+Y L  
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVL-- 98

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSL--------PSCSFKRKGMGFEAMGRKLYLLGGC- 140
                     ++      RW+ M  L        P     + G     +  KL ++ GC 
Sbjct: 99  ---------TMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCC 158

Query: 141 --SWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVC 167
             + S  A+ +VY YDT  NSWS +A L  AR  F C
Sbjct: 159 MINGSLVASADVYQYDTCLNSWSRLADLEVARYDFAC 184

[Close]
BLAST of Carg21005 vs. TAIR10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 9.8e-14
Identity = 48/181 (26.52%), Postives = 87/181 (48.07%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LIP LPD++ + IL+R+PR  + +++ VS+RW+  V++ E YS R++    E W+Y L +
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRK-------------------------- 140
              +++  Y LD  S+K  W+++  +P   ++ +                          
Sbjct: 103 GHEDKLLWYALDPVSTK--WQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFL 162

Query: 141 ------------GMGFEAMGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARC 164
                       G    A+   LY++GG S S+  +  V+ +D   NSWS V+ + ++R 
Sbjct: 163 GRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSC-VWRFDPILNSWSEVSSMLASRA 220

[Close]
BLAST of Carg21005 vs. Swiss-Prot
Match: sp|Q9M2C9|SKIP4_ARATH (F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana OX=3702 GN=SKIP4 PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.7e-79
Identity = 158/342 (46.20%), Postives = 209/342 (61.11%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LI G+PDDI  S L+RVPR+YH  +K VS+RW+D V S+E    R + +LAE+WIYALCR
Sbjct: 21  LISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEFNLAESWIYALCR 80

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAMGRKLYLLGGCSWSEDATDE 140
           D S  V  ++L+  SS+R WK++   P     R+GMGF  +G++L++LGGC W EDATDE
Sbjct: 81  DISGGVFLHMLNPFSSRRSWKRINDYPYIPM-REGMGFAVLGKRLFVLGGCGWLEDATDE 140

Query: 141 VYCYDTSTNSWSSVA-PLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
           +YCYD + N+W  V  PLS+ RCYF C                                 
Sbjct: 141 IYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGLNPNAKRTWDIYDPLTRTC 200

Query: 201 XXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDPSSGTWEHSDSEMVSGWRGP 260
             C D+ NI  E+E S VMDG+IYIR     S     VY  SSG WE  D +M SGWRGP
Sbjct: 201 KSCSDV-NIVPEMEDSFVMDGRIYIRGGVGGSS--TAVYSASSGIWERMDDDMASGWRGP 260

Query: 261 AVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTRPPCQLVAVGKRIVVVGKGL 320
           AV+V   LYVLDQ+ G +L MW  + + WI +G+ S L+ + PC+LV++G  I V+GK  
Sbjct: 261 AVVVAGDLYVLDQTFGAKLTMWCKDTRMWIHIGKLSQLVMKQPCRLVSIGNSIFVIGKDC 320

Query: 321 SSVIFNVDNAR--TMEGLMVSSSIPRL-DSDVDVLSCKCVTI 359
           S+V+ +V+N R   M G+MV SSIP+  D D+DV+SCK V I
Sbjct: 321 STVVIDVENVRKNKMNGVMVCSSIPKTWDDDIDVISCKSVAI 358

[Close]
BLAST of Carg21005 vs. Swiss-Prot
Match: sp|Q93W93|FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-14
Identity = 104/313 (33.23%), Postives = 149/313 (47.60%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           L+PGLPDD+ ++ L RVPR  H  L+ V KRW  L +   +YS R+   ++E W+Y   R
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAM-GRKLYLLGGCSWSEDATD 140
           D+  ++S    D  S  + W+ +  +P    +  G G   + G  LYL GG      +  
Sbjct: 138 DRDGKISWNTFDPIS--QLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMR 197

Query: 141 EVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
            V  Y+  TN W     +   R +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 198 RVIFYNARTNKWHRAPDMLRKRHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 257

Query: 201 XXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDPSSGTWEHSDSEMVSGWRGP 260
           XX     +        +V D K +++                          MV+GWR P
Sbjct: 258 XXXXXXXSTAMVPLIGVVYDKKWFLKGLGSHQLVMXXXXXXXXXXXXXXXXGMVAGWRNP 317

Query: 261 AVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALL----TRPPCQLVAVGKRIVVV 320
              ++  LY LD   G +L +++     W       A L    +     LV +  ++ ++
Sbjct: 318 CTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALVPLHNKLCII 377

Query: 321 GKGLSSVIFNVDN 329
              +S  + +V N
Sbjct: 378 RNNMSMSLVDVSN 388

[Close]
BLAST of Carg21005 vs. Swiss-Prot
Match: sp|Q9C6Z0|FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-13
Identity = 79/338 (23.37%), Postives = 138/338 (40.83%), Query Frame = 0 

Query: 18  GRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE-WYSCREKNDLAETWIY 77
           G  LIPGLPDD+ L+ L RVP + H + KSV KRW  L  ++E +++ R++    + W++
Sbjct: 50  GEPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLF 109

Query: 78  ALCRDK-SEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAMGR----KLYLLGG- 137
            +   + + ++   VLDL +    W ++ ++P C  K    GF ++       +++ GG 
Sbjct: 110 VVGFSRCTGKIQWKVLDLRN--LTWHEIPAMP-CRDKVCPHGFRSVSMPREGTMFVCGGM 169

Query: 138 CSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXX 197
            S S+   D V  YD   N W+    + +AR +F                          
Sbjct: 170 VSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYE----- 229

Query: 198 XXXXXXXXXXXCLDITNIQNEIEG----------------SIVMDGKIYIRQRHV---DS 257
                       LD   + N ++G                + V++GK+ + +  +     
Sbjct: 230 ------------LDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFV 289

Query: 258 QAYALVYDPSSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPV 317
                VYDP +  WE     +  GW G +V++   L+++ +    R+ M           
Sbjct: 290 SPRGQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELE--RMKMXXXXXXXXXXX 349

Query: 318 GRFSALLTRPPCQLVAV---GKRIVVVGKGLSSVIFNV 327
                 L    C+  AV   G R+ VVG+ L   + N+
Sbjct: 350 XXNGPELPEQICRPFAVNCYGNRVYVVGRNLHLAVGNI 365

[Close]
BLAST of Carg21005 vs. Swiss-Prot
Match: sp|Q9CAG8|FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.7e-13
Identity = 51/157 (32.48%), Postives = 74/157 (47.13%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LIPGLPDD+    L+ VPR    ++ SV K+W+ +V S+E+ + R    + E W+Y L  
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVL-- 98

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSL--------PSCSFKRKGMGFEAMGRKLYLLGGC- 140
                     ++      RW+ M  L        P     + G     +  KL ++ GC 
Sbjct: 99  ---------TMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCC 158

Query: 141 --SWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVC 167
             + S  A+ +VY YDT  NSWS +A L  AR  F C
Sbjct: 159 MINGSLVASADVYQYDTCLNSWSRLADLEVARYDFAC 184

[Close]
BLAST of Carg21005 vs. Swiss-Prot
Match: sp|Q9LM55|FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-12
Identity = 48/181 (26.52%), Postives = 87/181 (48.07%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LIP LPD++ + IL+R+PR  + +++ VS+RW+  V++ E YS R++    E W+Y L +
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRK-------------------------- 140
              +++  Y LD  S+K  W+++  +P   ++ +                          
Sbjct: 103 GHEDKLLWYALDPVSTK--WQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFL 162

Query: 141 ------------GMGFEAMGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARC 164
                       G    A+   LY++GG S S+  +  V+ +D   NSWS V+ + ++R 
Sbjct: 163 GRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSC-VWRFDPILNSWSEVSSMLASRA 220

[Close]
BLAST of Carg21005 vs. TrEMBL
Match: tr|A0A1S3AVK1|A0A1S3AVK1_CUCME (F-box/kelch-repeat protein SKIP4-like OS=Cucumis melo OX=3656 GN=LOC103483276 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 2.1e-159
Identity = 281/358 (78.49%), Postives = 296/358 (82.68%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MD+VLG +  EE  PP GR LI  LPDDI LSILSR+PRKYH NLK VS RWKDLVNS+E
Sbjct: 1   MDNVLGSNSLEELTPPPGRSLIHSLPDDIALSILSRIPRKYHQNLKCVSNRWKDLVNSQE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WY+CREKN+LAETWIYALCRDKSEQ+SCYVLDLNSSKR WKQMK LP+CSFKRKGMGFEA
Sbjct: 61  WYACREKNNLAETWIYALCRDKSEQLSCYVLDLNSSKRCWKQMKCLPTCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MGRKLY+LGGCSWSEDATDEVYCYDTS NSWS VAPLSSARCYF C              
Sbjct: 121 MGRKLYVLGGCSWSEDATDEVYCYDTSINSWSPVAPLSSARCYFACEVLNGKLYTMGGLC 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDP 240
                                 LD TNIQNEIEGSIVMDGKIYIR R VDSQ YALVYDP
Sbjct: 181 PSSGDRHSWDVYDPCTNTWESHLDNTNIQNEIEGSIVMDGKIYIRLRSVDSQVYALVYDP 240

Query: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300
           SSGTW+HSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNE KEWIPVGRFSALLTR
Sbjct: 241 SSGTWQHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKEWIPVGRFSALLTR 300

Query: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           PPCQLVAVG++IVVVGKGLSSVIF+V N RTMEGLMVSSSIPR DSD+DVLSCKC+TI
Sbjct: 301 PPCQLVAVGRKIVVVGKGLSSVIFDVSNVRTMEGLMVSSSIPRSDSDIDVLSCKCITI 358

[Close]
BLAST of Carg21005 vs. TrEMBL
Match: tr|A0A0A0L3L6|A0A0A0L3L6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122440 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 4.1e-147
Identity = 299/358 (83.52%), Postives = 317/358 (88.55%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MD VLG +G EE  PP GR LI  LPDDI LSILSRVPRKYHHNLK VS RWK LVNS+E
Sbjct: 1   MDKVLGSNGLEELTPPPGRSLIHSLPDDIALSILSRVPRKYHHNLKCVSNRWKGLVNSQE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           WY+ REKN+LAETWIYALCRDKSEQVSCYVLDLNSSKR WKQMK+ P+CSFKRKGMGFEA
Sbjct: 61  WYARREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKNWPTCSFKRKGMGFEA 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           MGRKLY+LGGCSWSEDA+DEVYCYDTS NSW+ VA LSSARCYF  XXXXXXXXXXXXXX
Sbjct: 121 MGRKLYVLGGCSWSEDASDEVYCYDTSINSWTPVAQLSSARCYFXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIRQRHVDSQAYALVYDP 240
           XXXXXXXXXXXXXXXXXXXXX      IQNEIE SIVMDGKIYIR R  DSQ YALVYDP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXIQNEIEDSIVMDGKIYIRLRSADSQVYALVYDP 240

Query: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300
           SSG W+HS+SEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNE K WIPVGRFS+LLTR
Sbjct: 241 SSGMWQHSNSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKGWIPVGRFSSLLTR 300

Query: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           PPC+LV VG +IVVVGKGLSSVIF+V N +TM GLMVSSSIPRLDSD+DVL+CKC TI
Sbjct: 301 PPCKLVGVGTKIVVVGKGLSSVIFDVSNVKTMMGLMVSSSIPRLDSDIDVLACKCTTI 358

[Close]
BLAST of Carg21005 vs. TrEMBL
Match: tr|A0A061E123|A0A061E123_THECC (SKP1 interacting partner 4 OS=Theobroma cacao OX=3641 GN=TCM_005342 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.2e-110
Identity = 201/360 (55.83%), Postives = 252/360 (70.00%), Query Frame = 0 

Query: 1   MDSVLGPSGFEEWIPPTGRLLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60
           MDS  G S        T   LI GLPDDI LS L+RVPR+YH  LK VS+RW+DLV+SEE
Sbjct: 1   MDSAEGGSDGNSQTEQTQEPLIGGLPDDIALSCLARVPREYHTVLKCVSRRWRDLVHSEE 60

Query: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120
           W+  R K++L ETWIYALC+DK E+V CYVLD +SS+R WKQ++ LPS S +RKG+GFE 
Sbjct: 61  WHVYRRKHNLDETWIYALCQDKFERVCCYVLDPDSSRRSWKQLRGLPSLSLRRKGIGFEV 120

Query: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXX 180
           +G+KLYL+GGC WSEDATDE YCYD S  +W+   PLS+ARCYF C              
Sbjct: 121 LGKKLYLMGGCRWSEDATDEAYCYDASIYAWTEANPLSTARCYFACEVLNQKIYAIGGLG 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXCLDITNIQNEIEGSIVMDGKIYIR--QRHVDSQAYALVY 240
                                  D  NI  EIE S V+DGKIYIR  +  V S  YA+VY
Sbjct: 181 LNSNVPHSWDTYDPCTNNWKSFSD-PNIVPEIEDSFVLDGKIYIRCGRSAVTSHVYAVVY 240

Query: 241 DPSSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALL 300
           +PSS TW+H+D++M SGW+GPAV+++ TLYVLD+SSGTRL+MW  E++EW+P+GR S LL
Sbjct: 241 EPSSCTWQHADADMASGWQGPAVVLNGTLYVLDESSGTRLIMWQKEIREWVPLGRLSPLL 300

Query: 301 TRPPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           TRPPC+LVAVGK I V+GKG S+V+ +V NA  M GLMVSSSIP+L S+ ++LSCKC++I
Sbjct: 301 TRPPCKLVAVGKSIYVIGKGRSTVVVDVSNAGNMGGLMVSSSIPKLTSNDEILSCKCLSI 359

[Close]
BLAST of Carg21005 vs. TrEMBL
Match: tr|A0A1R3I862|A0A1R3I862_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14135 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.7e-108
Identity = 228/340 (67.06%), Postives = 280/340 (82.35%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LI GLPDDI L  L+RVPR YH  LK VS+RW+DLV SE+W++ R K++L ETWIYALCR
Sbjct: 21  LICGLPDDIALFCLARVPRVYHTVLKCVSRRWRDLVCSEDWHTYRRKHNLDETWIYALCR 80

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEAMGRKLYLLGGCSWSEDATDE 140
           DK E++ CYVLD NSS+R WK+++ LPS S +RKG+GFE +G+KLYL+GGC WSEDATDE
Sbjct: 81  DKFERICCYVLDPNSSRRSWKRVQGLPSRSLRRKGVGFEVLGKKLYLMGGCKWSEDATDE 140

Query: 141 VYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
            YCYD S N+W+   PLS+ARCYF  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 141 TYCYDASINTWNEANPLSTARCYFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200

Query: 201 XCLDITNIQNEIEGSIVMDGKIYIR--QRHVDSQAYALVYDPSSGTWEHSDSEMVSGWRG 260
           X  D  NI  EIE S V+DGKIYIR  +  V+ Q YA+VY+PSSGTW H+D++M SGW+G
Sbjct: 201 XXXD-PNIVPEIEDSFVLDGKIYIRCGKSAVNFQVYAVVYEPSSGTWHHADADMASGWQG 260

Query: 261 PAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTRPPCQLVAVGKRIVVVGKG 320
           PAV+VD TLYVLD+SSGTRLMMW  +V+EW+PVGR S +LTRPPC+LV++GK I V+GKG
Sbjct: 261 PAVVVDGTLYVLDESSGTRLMMWRKDVREWVPVGRLSLMLTRPPCKLVSIGKSIYVIGKG 320

Query: 321 LSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
            S+V+ +V NA  M G+MVSSSIP+L S+ +++SCKC++I
Sbjct: 321 RSTVVVDVSNAGNMGGIMVSSSIPKLTSNDEIISCKCLSI 359

[Close]
BLAST of Carg21005 vs. TrEMBL
Match: tr|A0A124SDK6|A0A124SDK6_CYNCS (F-box domain, cyclin-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_000667 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 191/341 (56.01%), Postives = 245/341 (71.85%), Query Frame = 0 

Query: 21  LIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEEWYSCREKNDLAETWIYALCR 80
           LI GLPDDI L+ L+R+PR+YH  LK VS++W+DLV SEEW+S R+K++LAETWIYALC+
Sbjct: 21  LISGLPDDIALTCLARIPRRYHSLLKCVSRKWRDLVYSEEWHSYRQKHNLAETWIYALCK 80

Query: 81  DKSEQVSCYVLDLNSSKRRWKQMKSL-PSCSFKRKGMGFEAMGRKLYLLGGCSWSEDATD 140
           DK EQ+ CYVLD N  K+ WK++  L PSCS KRKG+GFE +GR +Y LGGC W EDATD
Sbjct: 81  DKLEQLCCYVLDPNMPKKGWKRIPDLSPSCS-KRKGVGFEVLGRNIYFLGGCGWIEDATD 140

Query: 141 EVYCYDTSTNSWSSVAPLSSARCYFVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
           EVYCYD S N+WS  +PLS+ARCYF C                                 
Sbjct: 141 EVYCYDASRNAWSEASPLSTARCYFACEAIDGKMYAIGGLGSKSSDPHSWDTFDSNMNSW 200

Query: 201 XXCLDITNIQNEIEGSIVMDGKIYIR--QRHVDSQAYALVYDPSSGTWEHSDSEMVSGWR 260
              +D  N+  EIE S+V+DGKIYIR     V S  YA+VYDP +GTW+H+DS+MVSGWR
Sbjct: 201 ASHMD-PNVVPEIEDSLVLDGKIYIRCGSSAVSSHIYAVVYDPLNGTWQHADSDMVSGWR 260

Query: 261 GPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTRPPCQLVAVGKRIVVVGK 320
           GPA++V++TLYVLDQSSGTR+M+W  + +EW   GR S++LTRPPC+L A+G +I VVGK
Sbjct: 261 GPAIVVNETLYVLDQSSGTRVMVWRKDTREWEAFGRLSSILTRPPCRLAAIGNKIFVVGK 320

Query: 321 GLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 359
           GLS+V F+VD A  M+G++VS+S P+L SD DV+SCK V++
Sbjct: 321 GLSTVAFDVDKAANMDGVLVSTSAPKLPSDDDVISCKSVSL 359

The following BLAST results are available for this feature:
BLAST of Carg21005 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526215.13.0e-17897.77F-box/kelch-repeat protein SKIP4 [Cucurbita pepo subsp. pepo] >XP_023526216.1 F-... [more]
XP_022924533.15.2e-17898.04F-box/kelch-repeat protein SKIP4 [Cucurbita moschata] >XP_022924534.1 F-box/kelc... [more]
XP_022980337.11.1e-17797.77F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980338.1 F-box/kelch-... [more]
XP_008438055.13.1e-15978.49PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis melo][more]
XP_022147528.16.8e-15476.32F-box/kelch-repeat protein SKIP4 [Momordica charantia] >XP_022147529.1 F-box/kel... [more]
BLAST of Carg21005 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61350.19.3e-8146.20SKP1 interacting partner 4[more]
AT1G55270.11.4e-1533.23Galactose oxidase/kelch repeat superfamily protein[more]
AT1G30090.16.8e-1523.37Galactose oxidase/kelch repeat superfamily protein[more]
AT1G67480.11.5e-1432.48Galactose oxidase/kelch repeat superfamily protein[more]
AT1G22040.19.8e-1426.52Galactose oxidase/kelch repeat superfamily protein[more]
BLAST of Carg21005 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M2C9|SKIP4_ARATH1.7e-7946.20F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana OX=3702 GN=SKIP4 PE=1 S... [more]
sp|Q93W93|FBK22_ARATH2.5e-1433.23F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527... [more]
sp|Q9C6Z0|FBK17_ARATH1.2e-1323.37F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g3009... [more]
sp|Q9CAG8|FBK28_ARATH2.7e-1332.48F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748... [more]
sp|Q9LM55|FBK8_ARATH1.8e-1226.52F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204... [more]
BLAST of Carg21005 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVK1|A0A1S3AVK1_CUCME2.1e-15978.49F-box/kelch-repeat protein SKIP4-like OS=Cucumis melo OX=3656 GN=LOC103483276 PE... [more]
tr|A0A0A0L3L6|A0A0A0L3L6_CUCSA4.1e-14783.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122440 PE=4 SV=1[more]
tr|A0A061E123|A0A061E123_THECC5.2e-11055.83SKP1 interacting partner 4 OS=Theobroma cacao OX=3641 GN=TCM_005342 PE=4 SV=1[more]
tr|A0A1R3I862|A0A1R3I862_COCAP3.7e-10867.06Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14135 PE=4 ... [more]
tr|A0A124SDK6|A0A124SDK6_CYNCS1.2e-10656.01F-box domain, cyclin-like protein OS=Cynara cardunculus var. scolymus OX=59895 G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR015915Kelch-typ_b-propeller
IPR001810F-box_dom
IPR006652Kelch_1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21005-RACarg21005-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 124..171
e-value: 2.4E-7
score: 40.4
coord: 172..219
e-value: 4.8
score: 5.7
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 113..158
e-value: 6.8E-11
score: 41.5
coord: 160..202
e-value: 2.9E-8
score: 33.1
IPR001810F-box domainSMARTSM00256fbox_2coord: 25..65
e-value: 3.2E-6
score: 36.7
IPR001810F-box domainPFAMPF00646F-boxcoord: 22..59
e-value: 6.1E-8
score: 32.2
IPR001810F-box domainPROSITEPS50181FBOXcoord: 19..65
score: 9.709
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 21..73
e-value: 2.5E-7
score: 32.3
NoneNo IPR availablePANTHERPTHR24414FAMILY NOT NAMEDcoord: 16..358
NoneNo IPR availablePANTHERPTHR24414:SF40F-BOX/KELCH-REPEAT PROTEIN SKIP4coord: 16..358
IPR015915Kelch-type beta propellerGENE3DG3DSA:2.120.10.80coord: 74..333
e-value: 1.3E-34
score: 121.5
IPR015915Kelch-type beta propellerSUPERFAMILYSSF117281Kelch motifcoord: 73..320
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 21..62