Carg20870 (gene) Silver-seed gourd

Overview
NameCarg20870
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_141 : 42266 .. 43066 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTTCGAGTCTCCATTAATGGGTCGAGTTTGTTCCGGCGGAATTAGGTTCAGAGAAATCCGAACCACCACCCACAAACCCGCGATGGAGACCAAATTGGTTCGAATTTCGTTCACCGACGGCGACGCCACCGATTCCTCGAGTGGGGAAGATGAAGAGCCAATCTCCATCCGCCACGTCAAACGCCACGTGACTGAGATCAGGCTTCTCACTCGTAGTTCCAAAAAATCGCCGCCGAAATCGGGAGCTGAACCTAGAAAGTTCCGGGGAGTTAGGCGACGGCCGTGGGGGAAATGGGCTGCCGAGATCAGAGACCCTTTCCGGCGGACTAGAGTTTGGCTTGGTACCTACGACACGCCGGAGGAAGCTGCTGTCGTGTACGACCAAGCCGCCGTCCGCCTTAAAGGCCCCAACGCTCTAACCAATTTCGCCGAAGCTCCCATTTCCAAAAGTACTGTTACCACACTTCTAACTCCGCCGCCGCTGGCGGTGGCGGTGGCGATTTCCGATAGAGAAGAATCTCGGTGTCTGTGCTCTCCGACTTCCGTTTTGAGATTAGAAGAACAAATTTGGAGACCCATTGAGCATGTAAACGAAGAATCAGCATTAGAAATGGAATTAAATTGGTCATATGATCGGAATTCCAACAGTTTGTTGTTCAATTCAAGAACCCCACAGCCCATAAATTCCGACGAAGTGGAAGATTTCGGCGACATTCCGATGGATTTCGAATCATGCAAATGGGATGTAGAGAATTATTTTCAAGATCCAACCTTTAGTATCTCAATCACTGACTGA

mRNA sequence

ATGAACTTCGAGTCTCCATTAATGGGTCGAGTTTGTTCCGGCGGAATTAGGTTCAGAGAAATCCGAACCACCACCCACAAACCCGCGATGGAGACCAAATTGGTTCGAATTTCGTTCACCGACGGCGACGCCACCGATTCCTCGAGTGGGGAAGATGAAGAGCCAATCTCCATCCGCCACGTCAAACGCCACGTGACTGAGATCAGGCTTCTCACTCGTAGTTCCAAAAAATCGCCGCCGAAATCGGGAGCTGAACCTAGAAAGTTCCGGGGAGTTAGGCGACGGCCGTGGGGGAAATGGGCTGCCGAGATCAGAGACCCTTTCCGGCGGACTAGAGTTTGGCTTGGTACCTACGACACGCCGGAGGAAGCTGCTGTCGTGTACGACCAAGCCGCCGTCCGCCTTAAAGGCCCCAACGCTCTAACCAATTTCGCCGAAGCTCCCATTTCCAAAAGTACTGTTACCACACTTCTAACTCCGCCGCCGCTGGCGGTGGCGGTGGCGATTTCCGATAGAGAAGAATCTCGGTGTCTGTGCTCTCCGACTTCCGTTTTGAGATTAGAAGAACAAATTTGGAGACCCATTGAGCATGTAAACGAAGAATCAGCATTAGAAATGGAATTAAATTGGTCATATGATCGGAATTCCAACAGTTTGTTGTTCAATTCAAGAACCCCACAGCCCATAAATTCCGACGAAGTGGAAGATTTCGGCGACATTCCGATGGATTTCGAATCATGCAAATGGGATGTAGAGAATTATTTTCAAGATCCAACCTTTAGTATCTCAATCACTGACTGA

Coding sequence (CDS)

ATGAACTTCGAGTCTCCATTAATGGGTCGAGTTTGTTCCGGCGGAATTAGGTTCAGAGAAATCCGAACCACCACCCACAAACCCGCGATGGAGACCAAATTGGTTCGAATTTCGTTCACCGACGGCGACGCCACCGATTCCTCGAGTGGGGAAGATGAAGAGCCAATCTCCATCCGCCACGTCAAACGCCACGTGACTGAGATCAGGCTTCTCACTCGTAGTTCCAAAAAATCGCCGCCGAAATCGGGAGCTGAACCTAGAAAGTTCCGGGGAGTTAGGCGACGGCCGTGGGGGAAATGGGCTGCCGAGATCAGAGACCCTTTCCGGCGGACTAGAGTTTGGCTTGGTACCTACGACACGCCGGAGGAAGCTGCTGTCGTGTACGACCAAGCCGCCGTCCGCCTTAAAGGCCCCAACGCTCTAACCAATTTCGCCGAAGCTCCCATTTCCAAAAGTACTGTTACCACACTTCTAACTCCGCCGCCGCTGGCGGTGGCGGTGGCGATTTCCGATAGAGAAGAATCTCGGTGTCTGTGCTCTCCGACTTCCGTTTTGAGATTAGAAGAACAAATTTGGAGACCCATTGAGCATGTAAACGAAGAATCAGCATTAGAAATGGAATTAAATTGGTCATATGATCGGAATTCCAACAGTTTGTTGTTCAATTCAAGAACCCCACAGCCCATAAATTCCGACGAAGTGGAAGATTTCGGCGACATTCCGATGGATTTCGAATCATGCAAATGGGATGTAGAGAATTATTTTCAAGATCCAACCTTTAGTATCTCAATCACTGACTGA

Protein sequence

MNFESPLMGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTEIRLLTRSSKKSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAVAVAISDREESRCLCSPTSVLRLEEQIWRPIEHVNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEVEDFGDIPMDFESCKWDVENYFQDPTFSISITD
Homology
[Close]
BLAST of Carg20870 vs. NCBI nr
Match: XP_022974641.1 (pathogenesis-related genes transcriptional activator PTI6-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 486.9 bits (1252), Expect = 4.4e-134
Identity = 245/260 (94.23%), Postives = 249/260 (95.77%), Query Frame = 0 

Query: 8   MGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 67
           MGRVCSGGIRFREIRTTTHKPA ETKLVRISFTDGDATDSSSGEDEE ISIRHVKRHVTE
Sbjct: 1   MGRVCSGGIRFREIRTTTHKPATETKLVRISFTDGDATDSSSGEDEETISIRHVKRHVTE 60

Query: 68  IRLLTRSSKKSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVV 127
           IRLLTRSSKKSP KSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVV
Sbjct: 61  IRLLTRSSKKSPLKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVV 120

Query: 128 YDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAV--AVAISDREESRCLCSPTSVL 187
           YDQAAVRLKGPNALTNFAEAP SKSTV T  TPPPLAV  AVAISDREESR LCSPTSVL
Sbjct: 121 YDQAAVRLKGPNALTNFAEAPNSKSTVATHFTPPPLAVALAVAISDREESRSLCSPTSVL 180

Query: 188 RLEEQIWRPIEHVNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEVEDFGDIPMDFE 247
           RLEEQIWRPIEHV+EESALEMELNW YDRNSNSLLFNSR+PQPINSDE+EDFGDIPMDFE
Sbjct: 181 RLEEQIWRPIEHVSEESALEMELNWLYDRNSNSLLFNSRSPQPINSDEMEDFGDIPMDFE 240

Query: 248 SCKWDVENYFQDPTFSISIT 266
           SCKWDVENYFQDPTFSIS+T
Sbjct: 241 SCKWDVENYFQDPTFSISLT 260

[Close]
BLAST of Carg20870 vs. NCBI nr
Match: XP_022974639.1 (pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 478.8 bits (1231), Expect = 1.2e-131
Identity = 244/267 (91.39%), Postives = 249/267 (93.26%), Query Frame = 0 

Query: 8   MGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 67
           MGRVCSGGIRFREIRTTTHKPA ETKLVRISFTDGDATDSSSGEDEE ISIRHVKRHVTE
Sbjct: 1   MGRVCSGGIRFREIRTTTHKPATETKLVRISFTDGDATDSSSGEDEETISIRHVKRHVTE 60

Query: 68  IRLLTRSSKKSPPKSGAEP-------RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT 127
           IRLLTRSSKKSP KSGA+P       RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT
Sbjct: 61  IRLLTRSSKKSPLKSGADPLRNSKCHRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT 120

Query: 128 PEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAV--AVAISDREESRCL 187
           PEEAAVVYDQAAVRLKGPNALTNFAEAP SKSTV T  TPPPLAV  AVAISDREESR L
Sbjct: 121 PEEAAVVYDQAAVRLKGPNALTNFAEAPNSKSTVATHFTPPPLAVALAVAISDREESRSL 180

Query: 188 CSPTSVLRLEEQIWRPIEHVNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEVEDFG 247
           CSPTSVLRLEEQIWRPIEHV+EESALEMELNW YDRNSNSLLFNSR+PQPINSDE+EDFG
Sbjct: 181 CSPTSVLRLEEQIWRPIEHVSEESALEMELNWLYDRNSNSLLFNSRSPQPINSDEMEDFG 240

Query: 248 DIPMDFESCKWDVENYFQDPTFSISIT 266
           DIPMDFESCKWDVENYFQDPTFSIS+T
Sbjct: 241 DIPMDFESCKWDVENYFQDPTFSISLT 267

[Close]
BLAST of Carg20870 vs. NCBI nr
Match: XP_022974640.1 (pathogenesis-related genes transcriptional activator PTI6-like isoform X2 [Cucurbita maxima] >XP_022975029.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975030.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975031.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975032.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975033.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975034.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975035.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima] >XP_022975036.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita maxima])

HSP 1 Score: 476.1 bits (1224), Expect = 7.8e-131
Identity = 242/265 (91.32%), Postives = 247/265 (93.21%), Query Frame = 0 

Query: 8   MGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 67
           MGRVCSGGIRFREIRTTTHKPA ETKLVRISFTDGDATDSSSGEDEE ISIRHVKRHVTE
Sbjct: 1   MGRVCSGGIRFREIRTTTHKPATETKLVRISFTDGDATDSSSGEDEETISIRHVKRHVTE 60

Query: 68  IRLLTRSSKKSPPKSGAEP-------RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT 127
           IRLLTRSSKKSP KSGA+P       RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT
Sbjct: 61  IRLLTRSSKKSPLKSGADPLRNSKCHRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT 120

Query: 128 PEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAVAVAISDREESRCLCS 187
           PEEAAVVYDQAAVRLKGPNALTNFAEAP SKSTV T  TPPPL  AVAISDREESR LCS
Sbjct: 121 PEEAAVVYDQAAVRLKGPNALTNFAEAPNSKSTVATHFTPPPL--AVAISDREESRSLCS 180

Query: 188 PTSVLRLEEQIWRPIEHVNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEVEDFGDI 247
           PTSVLRLEEQIWRPIEHV+EESALEMELNW YDRNSNSLLFNSR+PQPINSDE+EDFGDI
Sbjct: 181 PTSVLRLEEQIWRPIEHVSEESALEMELNWLYDRNSNSLLFNSRSPQPINSDEMEDFGDI 240

Query: 248 PMDFESCKWDVENYFQDPTFSISIT 266
           PMDFESCKWDVENYFQDPTFSIS+T
Sbjct: 241 PMDFESCKWDVENYFQDPTFSISLT 263

[Close]
BLAST of Carg20870 vs. NCBI nr
Match: XP_022933939.1 (pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933945.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933953.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933961.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933969.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933977.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933985.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022933993.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata] >XP_022934001.1 pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 6.6e-130
Identity = 242/267 (90.64%), Postives = 243/267 (91.01%), Query Frame = 0 

Query: 8   MGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 67
           MGRVCSGGIRFREIRTTTHK A ETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE
Sbjct: 1   MGRVCSGGIRFREIRTTTHKSATETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 60

Query: 68  IRLLTRSSKKSPPKSGAEP-------RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT 127
           IRLLTRSSKKS  KSGAEP       RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT
Sbjct: 61  IRLLTRSSKKSSLKSGAEPLRNSKSYRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDT 120

Query: 128 PEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPP--PLAVAVAISDREESRCL 187
           PEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPP            REESRCL
Sbjct: 121 PEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPXXXXXXXXXXXXREESRCL 180

Query: 188 CSPTSVLRLEEQIWRPIEHVNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEVEDFG 247
           CSPTSVLRLEEQIWRPIEHVNEESALEMELNW YDRNSNSLLFNSRTPQPINSDEVEDFG
Sbjct: 181 CSPTSVLRLEEQIWRPIEHVNEESALEMELNWLYDRNSNSLLFNSRTPQPINSDEVEDFG 240

Query: 248 DIPMDFESCKWDVENYFQDPTFSISIT 266
           DIPMDFESCKWDVENYFQDPTFSIS+T
Sbjct: 241 DIPMDFESCKWDVENYFQDPTFSISLT 267

[Close]
BLAST of Carg20870 vs. NCBI nr
Match: XP_023538849.1 (pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538850.1 pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538851.1 pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538852.1 pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538853.1 pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 229/258 (88.76%), Postives = 233/258 (90.31%), Query Frame = 0 

Query: 8   MGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 67
           MGRVCSGGIRFREIRTTTHKPA ETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE
Sbjct: 1   MGRVCSGGIRFREIRTTTHKPATETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 60

Query: 68  IRLLTRSSKKSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVV 127
           IRLLTRSSKKSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVV
Sbjct: 61  IRLLTRSSKKSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVV 120

Query: 128 YDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAVAVAISDREESRCLCSPTSVLRL 187
           YDQAAVRLKGPNALTNFAEAPIS+STV                     R LCSPTSVLRL
Sbjct: 121 YDQAAVRLKGPNALTNFAEAPISESTV--XXXXXXXXXXXXXXXXXXXRSLCSPTSVLRL 180

Query: 188 EEQIWRPIEHVNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEVEDFGDIPMDFESC 247
           EEQIWRPIEHV+EESALEMELNW YDRNSNSLLFNSRTPQPINSDE+ DFGDIPMDFESC
Sbjct: 181 EEQIWRPIEHVSEESALEMELNWLYDRNSNSLLFNSRTPQPINSDEMGDFGDIPMDFESC 240

Query: 248 KWDVENYFQDPTFSISIT 266
           KWDVENYFQDPTFSIS+T
Sbjct: 241 KWDVENYFQDPTFSISLT 256

[Close]
BLAST of Carg20870 vs. TAIR10
Match: AT4G27950.1 (cytokinin response factor 4)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 107/284 (37.68%), Postives = 138/284 (48.59%), Query Frame = 0 

Query: 21  IRTTTHKPAMETK--------LVRISFTDGDATDSSSGEDEEPISIRHVKRHVTEIRLLT 80
           IR  T K +ME K        LVR+S TD DATDSSS E+E     R VKR + EIR+  
Sbjct: 21  IRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEEEFLFPRRRVKRLINEIRVEP 80

Query: 81  RSSK---------------------KSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRT 140
            SS                      + P  SG   +K+RGVR+RPWGKWAAEIRDP +R 
Sbjct: 81  SSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRR 140

Query: 141 RVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAVAVAISD 200
           R+WLGT+ T EEAA+VYD AA++L+GP+ALTNF                           
Sbjct: 141 RIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQXXXXXXXXXXXXXXXXXXXXXXXX 200

Query: 201 REESRCLCSPTSVLRL-----EEQIWRPIEHVNEESALEME---LNWSY-DRNSNSLLFN 260
            ++S+ L SPTSVL       EE I   I+ V +E  LE E   ++W   + N+N+    
Sbjct: 201 MDDSQHLSSPTSVLNYQTYVSEEPIDSLIKPVKQE-FLEPEQEPISWHLGEGNTNT---- 260

Query: 261 SRTPQPINSDEVEDFGDIPMDFESCKWDVENYFQDPTFSISITD 267
                  N D        P+D       ++NYF +    ISI D
Sbjct: 261 -------NDD------SFPLDITF----LDNYFNESLPDISIFD 282

[Close]
BLAST of Carg20870 vs. TAIR10
Match: AT2G46310.1 (cytokinin response factor 5)

HSP 1 Score: 131.3 bits (329), Expect = 8.6e-31
Identity = 105/288 (36.46%), Postives = 135/288 (46.88%), Query Frame = 0 

Query: 17  RFREIRTTTHKPAMET------KLVRISFTDGDATDSSSGEDEEPISIR-HVKRHVTEIR 76
           R R+ + T H+    T      K+V+I  TD  ATDSSS E+ +  S+   VKR+V EIR
Sbjct: 4   RVRKSKYTVHRKITSTPFDGFPKIVKIIVTDPCATDSSSDEENDNKSVAPRVKRYVDEIR 63

Query: 77  LLTRSSKKSPPKSGAEPR----------------KFRGVRRRPWGKWAAEIRDPFRRTRV 136
                 +  P +                      K+RGVR+RPWGK+AAEIRDP  RTR+
Sbjct: 64  FCDEDDEPKPARKAKXXXXAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRL 123

Query: 137 WLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTP--PPLAVAVAISD 196
           WLGT+ T EEAA+ YD+AA+R+KG NA TNF   P S +T     TP      V+   S 
Sbjct: 124 WLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSA 183

Query: 197 REESRCLCSPTSVLRLE-----EQIWRPIEHVNEESALEMELNWSY-------------D 256
           RE    LCSPTSVLR       E    P E  N     ++  +  Y             D
Sbjct: 184 RESQISLCSPTSVLRFSHNDETEYRTEPTEEQNPFFLPDLFRSGDYFWDSEITPDPLFLD 243

Query: 257 RNSNSLLFNSRTPQPINSDEVEDFGDIPM----DFESCKWDVENYFQD 258
               SLL N      +   +       P+    DF S  WDV+ +FQD
Sbjct: 244 EFHQSLLPNINNNNTVCDKDTNLSDSFPLGVIGDFSS--WDVDEFFQD 289

[Close]
BLAST of Carg20870 vs. TAIR10
Match: AT5G53290.1 (cytokinin response factor 3)

HSP 1 Score: 127.9 bits (320), Expect = 9.5e-30
Identity = 82/177 (46.33%), Postives = 99/177 (55.93%), Query Frame = 0 

Query: 16  IRFREIRTTTHKPAM---------------ETKLVRISFTDGDATDSSSGEDEEPISI-- 75
           I FR ++ T HK +M                 K V I +TD DATDSSS EDEE      
Sbjct: 5   IDFRPLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPR 64

Query: 76  RHVKRHVTEI-------------------RLLTRSSK-KSPPKSGAEP----------RK 135
           R VKR V EI                   RL + S + +SP  S   P          +K
Sbjct: 65  RRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKK 124

Query: 136 FRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFA 146
           FRGVR+RPWGKWAAEIRDP +R R+WLGT++T EEAAVVYD AA+RL+GP+ALTNF+
Sbjct: 125 FRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFS 181

[Close]
BLAST of Carg20870 vs. TAIR10
Match: AT3G61630.1 (cytokinin response factor 6)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27
Identity = 95/266 (35.71%), Postives = 128/266 (48.12%), Query Frame = 0 

Query: 16  IRFREIRTTTHKPAMET----KLVRISFTDGDATDSSSGEDEEPISIR--HVKRHVTEIR 75
           ++F E RT T+  A  +    +LVRI+ TD  ATD                VKR+V EIR
Sbjct: 8   VKFTENRTVTNVAATPSNGSPRLVRITVTDPFATDXXXXXXXXXXXXXXPRVKRYVKEIR 67

Query: 76  LLTRSSKKSPP------------------KSGAEPRKFRGVRRRPWGKWAAEIRDPFRRT 135
                S                        +  +P+K+RGVR+RPWGK+AAEIRDP  RT
Sbjct: 68  FCQGESXXXXXXXXXXXXXXXXXXXXXXVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRT 127

Query: 136 RVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPL----AVAV 195
           R+WLGT+ T EEAA+ YD+AA+ LKGP ALTNF   P          TP P+     V+ 
Sbjct: 128 RIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPP----------TPTPVIDLQTVSA 187

Query: 196 AISDREESRCLCSPTSVLRLEEQIWRPIEHVNEESALEME-LNWSYDRNSNSLLFNSRTP 253
               R+  + L SPTSVLR          +VNEE+  E+E +  S +R S  +     + 
Sbjct: 188 CDYGRDSRQSLHSPTSVLRF---------NVNEETEHEIEAIELSPERKSTVIKEEEESS 247

[Close]
BLAST of Carg20870 vs. TAIR10
Match: AT4G23750.1 (cytokinin response factor 2)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23
Identity = 69/170 (40.59%), Postives = 88/170 (51.76%), Query Frame = 0 

Query: 16  IRFREIRTTTHKPAME------TKLVRISFTDGDATD-----SSSGEDEEPISIRHVKRH 75
           I+F E +T T     E      T+++RIS TD DATD                    K+ 
Sbjct: 12  IKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDXXXXXXXXXXXXXXXXXXXXKKF 71

Query: 76  VTEI----------------------RLLTRSSKKSPPKSG----AEPRKFRGVRRRPWG 135
           V E+                      R +   S  SP  S        +KFRGVR+RPWG
Sbjct: 72  VNEVYLDSGAVVTGSCGQMESKKRQKRAVKSESTVSPVVSAXXXXTGEKKFRGVRQRPWG 131

Query: 136 KWAAEIRDPFRRTRVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAP 149
           KWAAEIRDP +R R+WLGTY+T EEAA+VYD AA++L+GP+ALTNF+  P
Sbjct: 132 KWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTP 181

[Close]
BLAST of Carg20870 vs. Swiss-Prot
Match: sp|O04682|PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum OX=4081 GN=PTI6 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-32
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 0 

Query: 33  KLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTEIRLL--------TRSSKKSPPKSGA 92
           ++VRI  TD DATDSS  +DE   ++R VKRHVTEI L+         +    SP     
Sbjct: 36  RVVRIILTDADATDSS--DDEGRNTVRRVKRHVTEINLMPSTKSIGDRKRRSVSPDSDVT 95

Query: 93  EPRKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNF 152
             +KFRGVR+RPWG+WAAEIRDP R  RVWLGTYDTPEEAAVVYD+AAV+LKGP+A+TNF
Sbjct: 96  RRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNF 155

Query: 153 AEAPISKSTVTTLLTPPPLAVAVAI-SDREESRCLCSPTSVL 186
              P+S +               A   D+ E+    SPTSVL
Sbjct: 156 ---PVSTTAEXXXXXXXXXXXXXADGGDKSENDVALSPTSVL 192

[Close]
BLAST of Carg20870 vs. Swiss-Prot
Match: sp|Q9SUE3|CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN=CRF4 PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-30
Identity = 107/284 (37.68%), Postives = 138/284 (48.59%), Query Frame = 0 

Query: 21  IRTTTHKPAMETK--------LVRISFTDGDATDSSSGEDEEPISIRHVKRHVTEIRLLT 80
           IR  T K +ME K        LVR+S TD DATDSSS E+E     R VKR + EIR+  
Sbjct: 21  IRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEEEFLFPRRRVKRLINEIRVEP 80

Query: 81  RSSK---------------------KSPPKSGAEPRKFRGVRRRPWGKWAAEIRDPFRRT 140
            SS                      + P  SG   +K+RGVR+RPWGKWAAEIRDP +R 
Sbjct: 81  SSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRR 140

Query: 141 RVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAVAVAISD 200
           R+WLGT+ T EEAA+VYD AA++L+GP+ALTNF                           
Sbjct: 141 RIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQXXXXXXXXXXXXXXXXXXXXXXXX 200

Query: 201 REESRCLCSPTSVLRL-----EEQIWRPIEHVNEESALEME---LNWSY-DRNSNSLLFN 260
            ++S+ L SPTSVL       EE I   I+ V +E  LE E   ++W   + N+N+    
Sbjct: 201 MDDSQHLSSPTSVLNYQTYVSEEPIDSLIKPVKQE-FLEPEQEPISWHLGEGNTNT---- 260

Query: 261 SRTPQPINSDEVEDFGDIPMDFESCKWDVENYFQDPTFSISITD 267
                  N D        P+D       ++NYF +    ISI D
Sbjct: 261 -------NDD------SFPLDITF----LDNYFNESLPDISIFD 282

[Close]
BLAST of Carg20870 vs. Swiss-Prot
Match: sp|O82339|CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN=CRF5 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 105/288 (36.46%), Postives = 135/288 (46.88%), Query Frame = 0 

Query: 17  RFREIRTTTHKPAMET------KLVRISFTDGDATDSSSGEDEEPISIR-HVKRHVTEIR 76
           R R+ + T H+    T      K+V+I  TD  ATDSSS E+ +  S+   VKR+V EIR
Sbjct: 4   RVRKSKYTVHRKITSTPFDGFPKIVKIIVTDPCATDSSSDEENDNKSVAPRVKRYVDEIR 63

Query: 77  LLTRSSKKSPPKSGAEPR----------------KFRGVRRRPWGKWAAEIRDPFRRTRV 136
                 +  P +                      K+RGVR+RPWGK+AAEIRDP  RTR+
Sbjct: 64  FCDEDDEPKPARKAKXXXXAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRL 123

Query: 137 WLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTP--PPLAVAVAISD 196
           WLGT+ T EEAA+ YD+AA+R+KG NA TNF   P S +T     TP      V+   S 
Sbjct: 124 WLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSA 183

Query: 197 REESRCLCSPTSVLRLE-----EQIWRPIEHVNEESALEMELNWSY-------------D 256
           RE    LCSPTSVLR       E    P E  N     ++  +  Y             D
Sbjct: 184 RESQISLCSPTSVLRFSHNDETEYRTEPTEEQNPFFLPDLFRSGDYFWDSEITPDPLFLD 243

Query: 257 RNSNSLLFNSRTPQPINSDEVEDFGDIPM----DFESCKWDVENYFQD 258
               SLL N      +   +       P+    DF S  WDV+ +FQD
Sbjct: 244 EFHQSLLPNINNNNTVCDKDTNLSDSFPLGVIGDFSS--WDVDEFFQD 289

[Close]
BLAST of Carg20870 vs. Swiss-Prot
Match: sp|Q9FK12|CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28
Identity = 82/177 (46.33%), Postives = 99/177 (55.93%), Query Frame = 0 

Query: 16  IRFREIRTTTHKPAM---------------ETKLVRISFTDGDATDSSSGEDEEPISI-- 75
           I FR ++ T HK +M                 K V I +TD DATDSSS EDEE      
Sbjct: 5   IDFRPLKYTEHKTSMTKYTKKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPR 64

Query: 76  RHVKRHVTEI-------------------RLLTRSSK-KSPPKSGAEP----------RK 135
           R VKR V EI                   RL + S + +SP  S   P          +K
Sbjct: 65  RRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKK 124

Query: 136 FRGVRRRPWGKWAAEIRDPFRRTRVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFA 146
           FRGVR+RPWGKWAAEIRDP +R R+WLGT++T EEAAVVYD AA+RL+GP+ALTNF+
Sbjct: 125 FRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFS 181

[Close]
BLAST of Carg20870 vs. Swiss-Prot
Match: sp|Q9M374|CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN=CRF6 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 95/266 (35.71%), Postives = 128/266 (48.12%), Query Frame = 0 

Query: 16  IRFREIRTTTHKPAMET----KLVRISFTDGDATDSSSGEDEEPISIR--HVKRHVTEIR 75
           ++F E RT T+  A  +    +LVRI+ TD  ATD                VKR+V EIR
Sbjct: 8   VKFTENRTVTNVAATPSNGSPRLVRITVTDPFATDXXXXXXXXXXXXXXPRVKRYVKEIR 67

Query: 76  LLTRSSKKSPP------------------KSGAEPRKFRGVRRRPWGKWAAEIRDPFRRT 135
                S                        +  +P+K+RGVR+RPWGK+AAEIRDP  RT
Sbjct: 68  FCQGESXXXXXXXXXXXXXXXXXXXXXXVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRT 127

Query: 136 RVWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPL----AVAV 195
           R+WLGT+ T EEAA+ YD+AA+ LKGP ALTNF   P          TP P+     V+ 
Sbjct: 128 RIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPP----------TPTPVIDLQTVSA 187

Query: 196 AISDREESRCLCSPTSVLRLEEQIWRPIEHVNEESALEME-LNWSYDRNSNSLLFNSRTP 253
               R+  + L SPTSVLR          +VNEE+  E+E +  S +R S  +     + 
Sbjct: 188 CDYGRDSRQSLHSPTSVLRF---------NVNEETEHEIEAIELSPERKSTVIKEEEESS 247

[Close]
BLAST of Carg20870 vs. TrEMBL
Match: tr|A0A1S4DSW2|A0A1S4DSW2_CUCME (pathogenesis-related genes transcriptional activator PTI6-like OS=Cucumis melo OX=3656 GN=LOC103483221 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.1e-99
Identity = 197/283 (69.61%), Postives = 221/283 (78.09%), Query Frame = 0 

Query: 1   MNFESPLMGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRH 60
           M    PLMGRV SGGI+FRE RT THKPA ETKLVRIS+TD DATDSSSGEDEEPI +RH
Sbjct: 1   MKSHYPLMGRVFSGGIKFRETRTVTHKPAAETKLVRISYTDADATDSSSGEDEEPILVRH 60

Query: 61  VKRHVTEIRLLTRS-SKKSPPKSGAEP-------RKFRGVRRRPWGKWAAEIRDPFRRTR 120
           VKRHVTEIRLLT   SKK+PPKS A P       RKFRGVRRRPWGKWAAEIRDP RRTR
Sbjct: 61  VKRHVTEIRLLTTDCSKKAPPKSRANPPRNSESHRKFRGVRRRPWGKWAAEIRDPLRRTR 120

Query: 121 VWLGTYDTPEEAAVVYDQAAVRLKGPNALTNF-AEAPISKSTVTTLLTP---PPLAVAVA 180
           VWLGTYDT EEAAVVYD+AAVRL+GP+ALTNF AE P S++T+ T LTP           
Sbjct: 121 VWLGTYDTAEEAAVVYDEAAVRLRGPSALTNFVAETPHSETTLVTYLTPXXXXXXXXXAV 180

Query: 181 ISDREESRCLCSPTSVLRLEEQIWRPIEH-VNEESALEMELNWSYDRNSNSLLFNSRTPQ 240
           +S+ +ESR +CSPTSVLRLEE+ WR I+H ++EES LE E NW YDRNSNS LFN  +PQ
Sbjct: 181 VSETKESRSVCSPTSVLRLEEENWRAIDHYLSEESGLEDEFNWLYDRNSNSFLFNLISPQ 240

Query: 241 PINSDEV-------EDFGDIPMDFESCKWDVENYFQDPTFSIS 264
           PI SD++       EDFGDI +DF+SCKWDVENYFQDP FSI+
Sbjct: 241 PIFSDQMEMTIPKWEDFGDISVDFDSCKWDVENYFQDPNFSIA 283

[Close]
BLAST of Carg20870 vs. TrEMBL
Match: tr|E5GCG6|E5GCG6_CUCME (AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-97
Identity = 194/276 (70.29%), Postives = 218/276 (78.99%), Query Frame = 0 

Query: 8   MGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRHVKRHVTE 67
           MGRV SGGI+FRE RT THKPA ETKLVRIS+TD DATDSSSGEDEEPI +RHVKRHVTE
Sbjct: 1   MGRVFSGGIKFRETRTVTHKPAAETKLVRISYTDADATDSSSGEDEEPILVRHVKRHVTE 60

Query: 68  IRLLTRS-SKKSPPKSGAEP-------RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYD 127
           IRLLT   SKK+PPKS A P       RKFRGVRRRPWGKWAAEIRDP RRTRVWLGTYD
Sbjct: 61  IRLLTTDCSKKAPPKSRANPPRNSESHRKFRGVRRRPWGKWAAEIRDPLRRTRVWLGTYD 120

Query: 128 TPEEAAVVYDQAAVRLKGPNALTNF-AEAPISKSTVTTLLTP---PPLAVAVAISDREES 187
           T EEAAVVYD+AAVRL+GP+ALTNF AE P S++T+ T LTP           +S+ +ES
Sbjct: 121 TAEEAAVVYDEAAVRLRGPSALTNFVAETPHSETTLVTYLTPXXXXXXXXXAVVSETKES 180

Query: 188 RCLCSPTSVLRLEEQIWRPIEH-VNEESALEMELNWSYDRNSNSLLFNSRTPQPINSDEV 247
           R +CSPTSVLRLEE+ WR I+H ++EES LE E NW YDRNSNS LFN  +PQPI SD++
Sbjct: 181 RSVCSPTSVLRLEEENWRAIDHYLSEESGLEDEFNWLYDRNSNSFLFNLISPQPIFSDQM 240

Query: 248 -------EDFGDIPMDFESCKWDVENYFQDPTFSIS 264
                  EDFGDI +DF+SCKWDVENYFQDP FSI+
Sbjct: 241 EMTIPKWEDFGDISVDFDSCKWDVENYFQDPNFSIA 276

[Close]
BLAST of Carg20870 vs. TrEMBL
Match: tr|A0A0A0L397|A0A0A0L397_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120390 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 6.4e-97
Identity = 195/283 (68.90%), Postives = 217/283 (76.68%), Query Frame = 0 

Query: 1   MNFESPLMGRVCSGGIRFREIRTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRH 60
           M    PLMGRV SGGI+FRE RT THKPA ETKLVRIS+TD DATDSSSGEDEEPI +RH
Sbjct: 1   MKSHYPLMGRVFSGGIKFRETRTVTHKPAAETKLVRISYTDADATDSSSGEDEEPILVRH 60

Query: 61  VKRHVTEIRLLTRS-SKKSPPKSGAEP-------RKFRGVRRRPWGKWAAEIRDPFRRTR 120
           VKRHVTEIRLLT   SKK+PPKS A P       RKFRGVRRRPWGKWAAEIRDP RRTR
Sbjct: 61  VKRHVTEIRLLTTDCSKKAPPKSRANPPRNSESHRKFRGVRRRPWGKWAAEIRDPLRRTR 120

Query: 121 VWLGTYDTPEEAAVVYDQAAVRLKGPNALTNF-AEAPISKSTVTTLL---TPPPLAVAVA 180
           VWLGTYDT EEAAVVYDQAAVRL+GP+ALTNF AE P S++T+ T L             
Sbjct: 121 VWLGTYDTAEEAAVVYDQAAVRLRGPSALTNFVAETPHSETTLVTYLXXXXXXXXXXXXX 180

Query: 181 ISDREESRCLCSPTSVLRLEEQIWRPIEH-VNEESALEMELNWSYDRNSNSLLFNSRTPQ 240
            S+ +ESR +CSPTSVLRLE++ WR I+H ++EES LE E NW YDRNSNS LFN   PQ
Sbjct: 181 XSETKESRSICSPTSVLRLEDENWRAIDHYLSEESGLEDEFNWLYDRNSNSFLFNLINPQ 240

Query: 241 PINSDEV-------EDFGDIPMDFESCKWDVENYFQDPTFSIS 264
           PI SD++       EDFGDI +DF+SCKWDVENYFQDP FSI+
Sbjct: 241 PIFSDQLEITIPKWEDFGDISVDFDSCKWDVENYFQDPNFSIA 283

[Close]
BLAST of Carg20870 vs. TrEMBL
Match: tr|B9I8U1|B9I8U1_POPTR (ERF family protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G094500v3 PE=2 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 1.9e-40
Identity = 120/297 (40.40%), Postives = 164/297 (55.22%), Query Frame = 0 

Query: 17  RFREIRTTTHK-----PAMETKLVRISFTDGDATDSSSGEDEEPISIRH--VKRHVTEIR 76
           ++ E +T T+K      +  T++VRIS TDG+ATDSS  E+EEP  I+H  +K+H+ EIR
Sbjct: 24  KYTEHKTVTNKLVRWEDSKATRIVRISVTDGNATDSSGDENEEP-KIQHPRIKKHINEIR 83

Query: 77  LLTRS------SKKSPPKSGA-----------EPRKFRGVRRRPWGKWAAEIRDPFRRTR 136
           +   S      +KKSP +              E +K+RGVR+RPWG+WAAEIRDP+RRTR
Sbjct: 84  MTNCSDREAEDAKKSPGQQVVKKNSRDQYYYPEGKKYRGVRQRPWGRWAAEIRDPYRRTR 143

Query: 137 VWLGTYDTPEEAAVVYDQAAVRLKGPNALTNFAEAPISKSTVTTLLTPPPLAVAVAI--- 196
           VWLGTYDT EEAA+VYDQAA+R+KGP+A TNF    +SK         P + + V I   
Sbjct: 144 VWLGTYDTAEEAAMVYDQAAIRIKGPDAQTNFTNTLVSKQHT------PDVDINVNISGY 203

Query: 197 -SDREESRCLCSPTSVLRL---------------EEQIWRPIEHVNEESALEMELNWSYD 256
            S +E    LCSPTSVLR                 +  WR  + V +E  L+   +    
Sbjct: 204 DSGKESHNSLCSPTSVLRFHSTGEPGPESQAAVQSDCCWRQNQEVVQEEILKGGDDECLV 263

[Close]
BLAST of Carg20870 vs. TrEMBL
Match: tr|A0A1Q3CNZ4|A0A1Q3CNZ4_CEPFO (AP2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25400 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.5e-40
Identity = 121/286 (42.31%), Postives = 158/286 (55.24%), Query Frame = 0 

Query: 22  RTTTHKPAMETKLVRISFTDGDATDSSSGEDEEPISIRH------VKRHVTEIRL----- 81
           R  T    +  K+VRIS TD DATDSSS E++E IS+ +      VK+++ EI++     
Sbjct: 28  RYPTDSNIVSPKIVRISVTDADATDSSSDENDETISVNNNVDNSRVKKYINEIKIEDCAR 87

Query: 82  --------LTRSSKKSPPKSGAEP---RKFRGVRRRPWGKWAAEIRDPFRRTRVWLGTYD 141
                    T +  K  PK  A+P    K+RGVR+RPWG+WAAEIRDPFRRTRVWLGTYD
Sbjct: 88  YNPSFIRERTSNGTKQEPKKKAKPVVTNKYRGVRQRPWGRWAAEIRDPFRRTRVWLGTYD 147

Query: 142 TPEEAAVVYDQAAVRLKGPNALTNFAE-APISKSTVTTLLTPPPLAVAVAISDREESRCL 201
           T EEAA+VYD+AA+ +KGP A+TNFA+ +P+ +  V          VA       ESR L
Sbjct: 148 TAEEAALVYDKAAISIKGPQAVTNFAKPSPVIEIDV----------VAAGYDSGVESRDL 207

Query: 202 CSPTSVLRLEEQ--------IWRPIEHVNEESALEMELN---WSYDRN---SNSLLFNSR 259
           CSPTSVLR              RP+  V  E A+E+  +   W  D +   S+  LF+  
Sbjct: 208 CSPTSVLRFRSNEEAEAGSTESRPLPDVVTE-AVEVSSSDGGWLLDPSCVCSDDFLFDCG 267

The following BLAST results are available for this feature:
BLAST of Carg20870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022974641.14.4e-13494.23pathogenesis-related genes transcriptional activator PTI6-like isoform X3 [Cucur... [more]
XP_022974639.11.2e-13191.39pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucur... [more]
XP_022974640.17.8e-13191.32pathogenesis-related genes transcriptional activator PTI6-like isoform X2 [Cucur... [more]
XP_022933939.16.6e-13090.64pathogenesis-related genes transcriptional activator PTI6-like [Cucurbita moscha... [more]
XP_023538849.13.2e-12488.76pathogenesis-related genes transcriptional activator PTI6-like isoform X1 [Cucur... [more]
BLAST of Carg20870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27950.12.9e-3137.68cytokinin response factor 4[more]
AT2G46310.18.6e-3136.46cytokinin response factor 5[more]
AT5G53290.19.5e-3046.33cytokinin response factor 3[more]
AT3G61630.12.0e-2735.71cytokinin response factor 6[more]
AT4G23750.11.3e-2340.59cytokinin response factor 2[more]
BLAST of Carg20870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04682|PTI6_SOLLC2.0e-3251.85Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicu... [more]
sp|Q9SUE3|CRF4_ARATH5.3e-3037.68Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|O82339|CRF5_ARATH1.5e-2936.46Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9FK12|CRF3_ARATH1.7e-2846.33Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9M374|CRF6_ARATH3.6e-2635.71Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Carg20870 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DSW2|A0A1S4DSW2_CUCME3.1e-9969.61pathogenesis-related genes transcriptional activator PTI6-like OS=Cucumis melo O... [more]
tr|E5GCG6|E5GCG6_CUCME1.3e-9770.29AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=41... [more]
tr|A0A0A0L397|A0A0A0L397_CUCSA6.4e-9768.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120390 PE=4 SV=1[more]
tr|B9I8U1|B9I8U1_POPTR1.9e-4040.40ERF family protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G094500v3 PE=2 SV=... [more]
tr|A0A1Q3CNZ4|A0A1Q3CNZ4_CEPFO5.5e-4042.31AP2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2540... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20870-RACarg20870-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 89..100
score: 69.39
coord: 111..127
score: 61.07
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 88..151
e-value: 8.9E-35
score: 131.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 88..137
e-value: 2.1E-12
score: 47.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 88..145
score: 23.551
IPR001471AP2/ERF domainCDDcd00018AP2coord: 88..147
e-value: 3.10102E-31
score: 110.824
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 87..146
e-value: 2.0E-29
score: 103.2
NoneNo IPR availablePANTHERPTHR31194:SF43ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATEDcoord: 23..233
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 23..233
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 88..145