Carg20559 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20559
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ERI1 exoribonuclease 2
Location	Cucurbita_argyrosperma_scaffold_113 : 277366 .. 282632 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCTCACCTTCCAGATCACACAGGTCTCTCTCTTCCCCGTTTTCAGTTTTCCTTTGATTTTCCATTTATTATGAGTATATATGGCAGCTCCTCGGGTATATTTGTTCTTATCATCGGGCTTCTTCAGGAGCGGATTTCAGGGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTTCTCAAGATCATGATGGCCCTTGAACGCAAAGGTGCTTGTTTGCTCTGGTTTCGTTATTTGAACTGTTTAAGTTTTCTCTCAACTGGTATTTGTTTCTTTTTTTGATCCAATCAATATGAATTTGTGCTGATTTAGTCGCATTCTCTTTCTCCTGCTCGAGGGGGATTCTGCGACTTTGTTTTGTTCATTTCCAAGCGCTACTGAGAACTAGTAACTCTAATTCTGTATAGAGTTGTTGTTGTTATTATTTTGAGCTGAGGGTAGTTCTATTGGGAAATCGAGGAGTCAAGTGAAGAATTGATATGGACATTGCCCTTTTGAGTTGACGTTAGTTCTTGTTGCTTTTTTTCGTTATGGAATTTTGAGATCAGAGGGAGGCGGCTGACCGGAGATATTGATATAATAACACATGTATTTACAGAGTGGGTTTATGAGCACCATACTTCATAGTATCTAGGAGTTTAGATGCCAAGAGCCATTAGTCAGAACTCTTGTACTTCAACGCTTCTTTAACATTTAAAGCATTAAAGTTCGAAGGGTAAGGACCTTGTTAACTGAGAATGATCGTCTGGGTTTTTCTTCTGTGGGTTTTTCTTCTGTTTCTTTTAGGTAATTTGAATCTTAGACAGAAAATTTGAATCGAGGTTTTATTAGCTAGTTTGGAATTGAATCACCGGTGGTTCAACAGGCGTGGAATGTAATTTTAACCAACTGACTAGCACGGCTCTTTATAATTAGGTGATTCTTGCTATGGTGACATTATTAAGAGGACTTATATGAAGCAATTAACAATTATTGAATGTTAAAGATCTTCAATTTTAAAGTTAGCTACTTCAAGAGGCATGATCTCTCTACCTCTTCCGGCCGATCATCCATCTTACCTCTAGCAGCTTTTTGAATTCTTATAGTAGTTGGGAATGAAGGGTACCAGGGCTCTAGTTTAAGATAGATTATACATGTATGAAGTATCATTTGTCACTATCTCTTTTTTTAAAAAATTACATTCCTGTTGTGTGGAGTCTGTTAAGATCTCTTATGGATGTGCCGTTTTTTCTTTTGGAGAAGATAAGTAAAGTGGTTTTTAGGTTTGCAAGAGATAAGTCCTTAATGCCCTGATGGTTTCTCCATGGAGGTAATTGTGAGGGCATTAAAGAGGATTTTTTGAATGGCAATTTCCGAATTTTATGTGTGCGCGCAGGTGGGTTTTAGATGCCTTAATAAATGAAACTTATGTTTGTCTCATCCCAAAGAAAATGCAAAACATGATCAAGGACTTTAGGTTGATTAGCGTTGTTATAAGTTTATATAAGATGATAGCGAAGACCTTGGCTGAGGTTTGAGAATTCTTTCTATTGCAACTCGAAGTCTTCAGGAGATTTTAGTGGGGGAGGAAAATTTTAGACCATTTGCTCATCACTAACGATACCATCAAGGACTTTAGGAGGAAGAACTAATGCAACTCGAAATCTTTTATGTGGCTACAGATCTCTTGATTTATGCCAATTCAAATGCTAACCTCCACAAGTGGTTGGGATTATGGCTGCTTTTTTGTGCTTTTCATGTATAAATAAACTATTAGTTTCCTCCTTTAAAAAGATCACCCCGTCGTTTGTACAGTTTTGAGAGCATTTTTGCAACACCCTTGGTTTGAGGTTTTCCATTTTATATATCTTATTATTTTAAGAAAATGTTTAATATCCTATTAGATAGCTTTGGGTTTCAGTTTATTCTCATTTTCCCTCTCTCTATTAGCATTTCCAAGTTTCTTGTTCCTCCCTTTCTGATTTCCTTCCCATGACATCCTTTTTCTATTCCTGTATTTTCTTCCCCGTCCTCCTGATTTCCTCACCTTGTTTTCTTGTCAGCCATCCTTTTCAAATTTTCCCTTGTTGTGCTGTGGATGAGCAACAATGATCGAGTATGCAACTTCCGATTTTGTTGATGAGAACCGGTGTTATCTGCCCCGTAGAGATTTTCTTAGATAAATGTCAGAATTTTCATTACTGAGGAAACAATACCAGAGGTGGAAAGCAATTTTTAGAGTTCTCTACGATATTGCTATCCTGTAAGCCTCCCTTGACTTTATGTTGCTGAAATGACATCTTTTGAATCGGTATGAATCTGCCAGTCGCAAGAAATGGTAATAGTTTTACCTCTTTTATTCCTGGTTGCAATCCGGTAATTTCTCTTCCAATTGAAACTTTGACCTTTTATGCGACATTAAGTGGTTAAATAATAACTAAAACCTAAAAACTTAAATTGATAGATTACAACGAATTTAGTATTTTTATCAATATTTTGATAGTTTCTCTCACTTGTGAGATTGAAAATTTATGAAATGCCTAACAAGTGAAACCAATATTAATTTGGAAAGAAATGGCAATACTTTGATATTATATCAAATATCAAATTACCAAATACCACTGGACAAAAAAGATTTAGTTGATCAGTTATAGTAAATTAAATATTTTTTAGTGCGATATCTATCTTTGTTTTCCTCCAGGAACACCTATGGTCTTCTAAATGTTTAACTTTATATCTTTATTGGATATTGTTTTAGCCATATTGACTAGAGAAACCTTCTATGTTCTCTATACAATATTTAATTCAAAATCATTTTAATTTCTTTTGCTTCTTTGTTTGCAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTCTGCAACATAGTGGAAATTCTGTTGATGGTTTCCAAGAACGTACAGATGAAATCAGTTGTTATAGCAGCAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTTATTGAACGTCCAAATGAATTTCACAACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCTGCCTTTCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATTTTCGGCTGCAAGAGTTTCAATATTTTGTGGTTATAGACTTTGAAGCAACATGTGACAAGGATAAAAATCCCCATCCTCAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTCGAAGCTTGCTTTCAAACGTATGTGCGCCCAACTTGCAATCAGCTCTTAAGCGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTTTGTTTGAAGCTTAGCTTGTTTTTCTTCAAAGAAAATAATTACGCTTGGAGGTTGCATCTTGCTGGCATGGAACAAACTTGGTGGTGTGATTGATTATCGATTTTACTTAGTGTCCTACATTTAGGGTGTTTTTTATATTTAATTTTAAATCTTAATTTAAAAAAAATATATGATTCTTATCTTTTCTGATTCACTTATCCAATCTCCCTCCATAGTCTTAGTTTGGCACATAATTTTCTTTTAACGATTTCGATAATTTTCTGATGTTGTAATTTAGGTGCCTTTGAAGTTTGGTTCTAACGTGTGGCCTACCACTACCTATAATAGGGGTCTTCATGGGTTGGTTTGACTAAGATATAGACTTGAATTGAAACCTAGCCGAACCCTTGAAAGCCTTATAGTCTAAGGGAAGTATCTTGTGTTCCATGTAGCCTTTGGAGTCTTATATTCTCATTCTATTTCCTTTATAATTCTATTTGGTCATTGTTTATCTGTTAGGACCTTCTAATGTTTATCTTATCTCATTGCTGTCTATAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGACAAATGGCTTGAAAAGAAGGGGATAAAGAACGCAAATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAGTCGGAATGCCGTTTCAAGAAGATTCGAAAGCCTCAATATTTCAACCGGTAAATGATCCTCACAAAAGCTGTTTCTATGCATAGTACAAATAATAGTTTAAATCATATCGCGATAACCTAAACAATCATGAACTCGGAAGTGCACTAGAAGAACAAAATCATTTTAATGCTATTGGTTGTGCTGTTAGTAATCAATCAAGGTAGGAGCATCCTCACATTTGGAGCTTAAAATCTCGCAGGAAAAACAAACCAAACAGTTTATCATTGATACCTTCATCCTTCAGCCATTTGCCTAGTCTAACTTTTACAGCTTTAGCTGACGGTGCAACTTTTCATCTTCTCTAATTTGCCCCCAATGACTATCAAATGTTCAGCATTTTTGTTTATCAATTACTATTGTTTATAGCTTCAGTGGGAAAACGTTCCAACATTTAGTAGGAAAGTGCTCTGTTCTTAGCTTTAAACGGACTGGCATATTTCATTTGCCTTTAGAATAGCATTCCCTTTGAATTGTTCATTGACAGTCAGTTACATCTTCAAGTAAAAGAACGAACATATATCGATAAGAAAAGGCGTCGTCTGCATTCTAAAATACTTGGTGGCACCCATAACTTTTCACCAGTAGATAAACACGGTTATAATTGCTAAAGAATTGTATATTTATATTTAGTACTGCAATTAGTTCTTACTTCTCTCTTCTGATTTGACTGATGACAGATGGATCAACTTAAAAATTCCATTTTGTGAGGTTTTTGGTGGACAACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGATTATCTTGGCAAGGTCGTGCTCACTGTGGTCTTGACGATGCCAAGAACACTGCACGTTTACTCGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTTCAATGGAAACAACAACCCCCAGGAGGCGTTACATTCCCGCCGCAACCGCCATTGAAATCAAAGCCTATGCACATTCCCATCTTCCATTACCACCCCTACTGTATCTGTGGGGTAAGGAGCAGCCGAGGTATGGTTCGGAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAATTGGACTGCCACCAAGGGGGCACGATGCCATTACTTCCAATGGGCCTCTCCCTGA

mRNA sequence

CGGCTCACCTTCCAGATCACACAGGAGCGGATTTCAGGGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTTCTCAAGATCATGATGGCCCTTGAACGCAAAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTCTGCAACATAGTGGAAATTCTGTTGATGGTTTCCAAGAACGTACAGATGAAATCAGTTGTTATAGCAGCAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTTATTGAACGTCCAAATGAATTTCACAACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCTGCCTTTCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATTTTCGGCTGCAAGAGTTTCAATATTTTGTGGTTATAGACTTTGAAGCAACATGTGACAAGGATAAAAATCCCCATCCTCAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTCGAAGCTTGCTTTCAAACGTATGTGCGCCCAACTTGCAATCAGCTCTTAAGCGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGACAAATGGCTTGAAAAGAAGGGGATAAAGAACGCAAATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAGTCGGAATGCCGTTTCAAGAAGATTCGAAAGCCTCAATATTTCAACCGATGGATCAACTTAAAAATTCCATTTTGTGAGGTTTTTGGTGGACAACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGATTATCTTGGCAAGGTCGTGCTCACTGTGGTCTTGACGATGCCAAGAACACTGCACGTTTACTCGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTTCAATGGAAACAACAACCCCCAGGAGGCGTTACATTCCCGCCGCAACCGCCATTGAAATCAAAGCCTATGCACATTCCCATCTTCCATTACCACCCCTACTGTATCTGTGGGGTAAGGAGCAGCCGAGGTATGGTTCGGAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAATTGGACTGCCACCAAGGGGGCACGATGCCATTACTTCCAATGGGCCTCTCCCTGA

Coding sequence (CDS)

ATGATGGCCCTTGAACGCAAAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTCTGCAACATAGTGGAAATTCTGTTGATGGTTTCCAAGAACGTACAGATGAAATCAGTTGTTATAGCAGCAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTTATTGAACGTCCAAATGAATTTCACAACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCTGCCTTTCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATTTTCGGCTGCAAGAGTTTCAATATTTTGTGGTTATAGACTTTGAAGCAACATGTGACAAGGATAAAAATCCCCATCCTCAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTCGAAGCTTGCTTTCAAACGTATGTGCGCCCAACTTGCAATCAGCTCTTAAGCGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGACAAATGGCTTGAAAAGAAGGGGATAAAGAACGCAAATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAGTCGGAATGCCGTTTCAAGAAGATTCGAAAGCCTCAATATTTCAACCGATGGATCAACTTAAAAATTCCATTTTGTGAGGTTTTTGGTGGACAACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGATTATCTTGGCAAGGTCGTGCTCACTGTGGTCTTGACGATGCCAAGAACACTGCACGTTTACTCGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTTCAATGGAAACAACAACCCCCAGGAGGCGTTACATTCCCGCCGCAACCGCCATTGAAATCAAAGCCTATGCACATTCCCATCTTCCATTACCACCCCTACTGTATCTGTGGGGTAAGGAGCAGCCGAGGTATGGTTCGGAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAATTGGACTGCCACCAAGGGGGCACGATGCCATTACTTCCAATGGGCCTCTCCCTGA

Protein sequence

MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHCGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP

Homology

[Close]

BLAST of Carg20559 vs. NCBI nr
Match: XP_023537711.1 (3'-5' exoribonuclease 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 897.9 bits (2319), Expect = 1.3e-257
Identity = 415/416 (99.76%), Postives = 416/416 (100.00%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLP+ENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPLENRFHYV 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Carg20559 vs. NCBI nr
Match: XP_022951243.1 (3'-5' exoribonuclease 1-like isoform X2 [Cucurbita moschata] >XP_022951244.1 3'-5' exoribonuclease 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 897.1 bits (2317), Expect = 2.2e-257
Identity = 415/416 (99.76%), Postives = 415/416 (99.76%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYS NDIPETNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Carg20559 vs. NCBI nr
Match: XP_023002623.1 (uncharacterized protein LOC111496425 isoform X2 [Cucurbita maxima])

HSP 1 Score: 896.3 bits (2315), Expect = 3.8e-257
Identity = 414/416 (99.52%), Postives = 415/416 (99.76%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MM LERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH
Sbjct: 1   MMTLERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLALLMHRGFRFSITNSL+WQTSDCPFQWKQQPPGGVTFPPQPPLKSKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLLWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Carg20559 vs. NCBI nr
Match: XP_023002622.1 (uncharacterized protein LOC111496425 isoform X1 [Cucurbita maxima])

HSP 1 Score: 887.5 bits (2292), Expect = 1.8e-254
Identity = 409/415 (98.55%), Postives = 412/415 (99.28%), Query Frame = 0


Query: 2   MALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP 61
           + + R ESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP
Sbjct: 3   LPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP 62

Query: 62  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 121
           LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP
Sbjct: 63  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 122

Query: 122 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 181
           FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ
Sbjct: 123 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 182

Query: 182 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 241
           TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN
Sbjct: 183 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 242

Query: 242 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 301
           WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC
Sbjct: 243 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 302

Query: 302 GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 361
           GLDDAKNTARLLALLMHRGFRFSITNSL+WQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM
Sbjct: 303 GLDDAKNTARLLALLMHRGFRFSITNSLLWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 362

Query: 362 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 363 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417

[Close]

BLAST of Carg20559 vs. NCBI nr
Match: XP_023537710.1 (3'-5' exoribonuclease 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 887.5 bits (2292), Expect = 1.8e-254
Identity = 409/415 (98.55%), Postives = 412/415 (99.28%), Query Frame = 0


Query: 2   MALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP 61
           + + R ESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP
Sbjct: 3   LPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP 62

Query: 62  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 121
           LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLP+ENRFHYVP
Sbjct: 63  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPLENRFHYVP 122

Query: 122 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 181
           FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ
Sbjct: 123 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 182

Query: 182 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 241
           TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN
Sbjct: 183 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 242

Query: 242 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 301
           WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC
Sbjct: 243 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 302

Query: 302 GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 361
           GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM
Sbjct: 303 GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 362

Query: 362 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 363 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417

[Close]

BLAST of Carg20559 vs. TAIR10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-20
Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 195
           QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT    Q ++
Sbjct: 124 QEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAIN 183

Query: 196 DFCRDL---TGIQQIQVDRGVTLNEALLRHDKWLEKK---------GIKNANFAVVTWSN 255
            +        G+ ++  D  +   + +   + WL +          G+ +A F  VT  N
Sbjct: 184 KYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAF--VTCGN 243

Query: 256 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 315
           WD +  +  +C    I  P YF  WINLK  +   +G +   +   +   G+   G  H 
Sbjct: 244 WDIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHL 303

Query: 316 GLDDAKNTARLLALLMHRGFRFSIT 327
           G+DD KN  R++  ++  G    +T
Sbjct: 304 GIDDTKNITRVVQRMLSEGAVLKLT 317

[Close]

BLAST of Carg20559 vs. Swiss-Prot
Match: sp|A8K979|ERI2_HUMAN (ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 5.2e-40
Identity = 89/211 (42.18%), Postives = 127/211 (60.19%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKD-KNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 195
           Q F Y +VIDFE+TC  D K+ H QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+
Sbjct: 32  QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91

Query: 196 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNANFAV---------------VT 255
           FC +LTGI+Q QVD GV L   L +  KW+ K +  KN  FA                VT
Sbjct: 92  FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151

Query: 256 WSNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGR 315
           WS+WD  V LE EC+ K++ KP + N WI+L+  +   +  +   L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211

Query: 316 AHCGLDDAKNTARLLALLMHRGFRFSITNSL 330
            H GLDD++NTA L   ++  G    IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242

[Close]

BLAST of Carg20559 vs. Swiss-Prot
Match: sp|Q5HZL1|ERI2_XENLA (ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-39
Identity = 86/210 (40.95%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 195
           Q F+Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDF
Sbjct: 33  QFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDF 92

Query: 196 CRDLTGIQQIQVDRGVTLNEALLRHDKWLEK----KGI------------KNANFAVVTW 255
           C +LTGI Q QVD GV L   L + + W++K    KGI            ++   A VTW
Sbjct: 93  CTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTW 152

Query: 256 SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA 315
           S+WD  V L  ECR K+++KP   N WI+L+  +   +  +   L  A++  G+ + GR 
Sbjct: 153 SDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGRE 212

Query: 316 HCGLDDAKNTARLLALLMHRGFRFSITNSL 330
           H GLDD++NTA+L + ++  G    IT SL
Sbjct: 213 HSGLDDSRNTAKLASRMICDGCVMKITKSL 242

[Close]

BLAST of Carg20559 vs. Swiss-Prot
Match: sp|Q5BKS4|ERI2_MOUSE (ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.3e-38
Identity = 83/211 (39.34%), Postives = 124/211 (58.77%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 195
           Q + Y +V+DFE+TC  D   H   EIIEFP+V++++ TG++E+ F  YV+P  + +LS+
Sbjct: 32  QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91

Query: 196 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNANFAV---------------VT 255
           FC +LTGI+Q+QVD GV L   L +  KW+ K +  +  +FA                VT
Sbjct: 92  FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151

Query: 256 WSNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGR 315
           WS+WD  V LE ECR K++ KP + N WI+L+  +   +  +   L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211

Query: 316 AHCGLDDAKNTARLLALLMHRGFRFSITNSL 330
            H GLDD++NTA L   ++  G    IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242

[Close]

BLAST of Carg20559 vs. Swiss-Prot
Match: sp|A6QLH5|ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 133 FRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 192
           F  Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 197

Query: 193 SDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNANFAVVTWSNWDCRVMLES 252
           + FC +LTGI Q  VD   +L + L R D+W+ K+G+   N     VT  +WD +VML  
Sbjct: 198 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 257

Query: 253 ECRFKKIRKPQYFNRWINLKIPFCEVFG-GQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT 312
           +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN 
Sbjct: 258 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 317

Query: 313 ARLLALLMHRGFRFSITN 328
           A ++  L +RGF F  T+
Sbjct: 318 ANIMKTLAYRGFIFKQTS 334

[Close]

BLAST of Carg20559 vs. Swiss-Prot
Match: sp|O43414|ERI3_HUMAN (ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 133 FRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 192
           F  Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 197

Query: 193 SDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNANFAVVTWSNWDCRVMLES 252
           + FC +LTGI Q  VD   +L + L R D+W+ K+G+   N     VT  +WD +VML  
Sbjct: 198 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 257

Query: 253 ECRFKKIRKPQYFNRWINLKIPFCEVFG-GQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT 312
           +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN 
Sbjct: 258 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 317

Query: 313 ARLLALLMHRGFRFSITN 328
           A ++  L +RGF F  T+
Sbjct: 318 ANIMKTLAYRGFIFKQTS 334

[Close]

BLAST of Carg20559 vs. TrEMBL
Match: tr|A0A1S3BCJ6|A0A1S3BCJ6_CUCME (3'-5' exoribonuclease 1-like OS=Cucumis melo OX=3656 GN=LOC103488427 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 1.1e-231
Identity = 376/416 (90.38%), Postives = 391/416 (93.99%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNS DGFQE TDEISC+++NDIPETNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQMSAS+CQFYSLPVENRF Y 
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSSSWPAFHFESQKVQQCQMSASDCQFYSLPVENRFQYF 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFE NY CD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIV+SVTG LEACF
Sbjct: 121 PFKMFEHNY-CDVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK+GIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLK+PF EVFGG RCNLKEAVEMAGL W+GRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLAL+MH+GFRFSITNSLMWQT+DCP QWKQ P   VTFPPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALIMHKGFRFSITNSLMWQTTDCPLQWKQSPE-TVTFPPQPPMKPKP 360

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           MHIPI  Y PYC CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYF+WASP
Sbjct: 361 MHIPIVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 414

[Close]

BLAST of Carg20559 vs. TrEMBL
Match: tr|A0A0A0KDW9|A0A0A0KDW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399780 PE=4 SV=1)

HSP 1 Score: 808.9 bits (2088), Expect = 5.3e-231
Identity = 375/416 (90.14%), Postives = 391/416 (93.99%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNS DGFQE TDEISC+++NDIPETNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQMSAS+CQFYSLPVENRF Y 
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSRSWPAFHFESQKVQQCQMSASDCQFYSLPVENRFQYF 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFE NY CD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIV+SVTG LEACF
Sbjct: 121 PFKMFEPNY-CDVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK+GIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLK+PF EVFGG RCNLKEAVEMAGL W+GRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLAL+MH+GFRFSITNSLMWQT+DCP QWKQ P   VTFPPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALIMHKGFRFSITNSLMWQTTDCPLQWKQSPE-TVTFPPQPPMKPKP 360

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           MHIPI  Y PYC CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYF+WA+P
Sbjct: 361 MHIPIVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWATP 414

[Close]

BLAST of Carg20559 vs. TrEMBL
Match: tr|A0A2P6SAC4|A0A2P6SAC4_ROSCH (Putative ribonuclease H-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0326491 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 7.7e-190
Identity = 313/416 (75.24%), Postives = 354/416 (85.10%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MMALE+ E+MQRNCEAS+KCL + G P++LQ +GN ++GF E  DE+S +   D  E++ 
Sbjct: 1   MMALEQTENMQRNCEASLKCLHSKGFPYNLQCNGNPIEGFPEHKDELSNHPGGDNSESDR 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
           PL + F+E P E HNKP Y H+ G W AFHFDSQK+QQCQM+A E QFY LPV+NRFHYV
Sbjct: 61  PLGSEFLEPPTERHNKPTYHHDFGYWSAFHFDSQKLQQCQMNAFESQFYQLPVDNRFHYV 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PF +F Q+Y  +F+ Q+FQYFVVIDFEATCDKD+NPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFNVFAQSYPNEFQFQDFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCN LLSDFC+DLTGIQQIQVDRGVTL+EALLRHDKWLEKKGIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNHLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLK+PF EVFGG RCNLKEAV+MAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGMRCNLKEAVQMAGLAWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLL++LM RGF+F+ITNSL+WQT+D P   KQ P      PP   LK K 
Sbjct: 301 CGLDDAKNTARLLSVLMRRGFKFAITNSLLWQTADRPLTLKQSPEH--LSPPHHTLKLKD 360

Query: 361 MHIPIFHY-HPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWAS 416
           M IP+  Y HP+C CGV+SSRGMVRKPGPKQGS FFGCGNWTAT+GARCHYF+WAS
Sbjct: 361 MSIPVCQYHHPFCFCGVKSSRGMVRKPGPKQGSVFFGCGNWTATRGARCHYFEWAS 414

[Close]

BLAST of Carg20559 vs. TrEMBL
Match: tr|A0A251L522|A0A251L522_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G156500 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 1.7e-189
Identity = 312/416 (75.00%), Postives = 348/416 (83.65%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           MMALE KE++QR+CEAS+KCLQ NG P+     GNS+DGF E  +E S +S  D+ E  H
Sbjct: 1   MMALENKETIQRSCEASLKCLQTNGFPY-----GNSIDGFPELKEETSAHSGGDVVEPVH 60

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
            + + F+E P+EFH+KP Y H+ GSW  F+ DSQKVQQCQM+  E QFY  P+E RF Y 
Sbjct: 61  SISSEFLELPSEFHSKPTYHHDFGSWSTFYPDSQKVQQCQMNCFEGQFYPFPMETRFQYA 120

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PF M+ Q    +F  Q+FQYFVVIDFEATCDK+KNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFNMYSQGCPYEFHFQDFQYFVVIDFEATCDKEKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQLLSDFC+DLTGIQQIQVDRGVTL+EALLRHDKWLEKKGIKN+NFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLK+PF EVFGG RCNLKEAVEMAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLALLM RG RFSITNSLMWQT+D    WK   P  ++F P  P K K 
Sbjct: 301 CGLDDAKNTARLLALLMRRGIRFSITNSLMWQTTDGSLPWKPS-PDHLSFSPHQPYKLKE 360

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
           MHIP+F YHP+C CGV+SS+GMVRKPGPKQGS FFGCGNWTAT+GA CHYF+WASP
Sbjct: 361 MHIPVFQYHPFCYCGVKSSKGMVRKPGPKQGSLFFGCGNWTATRGALCHYFEWASP 410

[Close]

BLAST of Carg20559 vs. TrEMBL
Match: tr|D7TX74|D7TX74_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0084g00580 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 1.9e-188
Identity = 311/416 (74.76%), Postives = 347/416 (83.41%), Query Frame = 0


Query: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60
           M+ALE KE+MQRNCEAS+KCLQ+   P+ L   GN ++GF E  DE S ++  DI E   
Sbjct: 106 MIALEHKETMQRNCEASVKCLQSKRFPYKLPCKGNPIEGFSELKDETSVHAGGDIVERER 165

Query: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120
            L +  ++  NEFHNKP YQ++ GSWP F+ DSQKVQQCQ++A E Q+Y  PV+N+F Y 
Sbjct: 166 SLSSESLKPSNEFHNKPIYQNDFGSWPTFYPDSQKVQQCQLNAFESQYYPFPVDNQFLYA 225

Query: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PF  F Q Y  +F LQ+FQYFVVIDFEATCDK KNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 226 PFHAFSQGYPYEFMLQDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACF 285

Query: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240
           QTYVRPTCNQ+LSDFC+DLTGIQQIQVDRGVTL+EALLRHDKWLEKKGIKN NFAVVTWS
Sbjct: 286 QTYVRPTCNQILSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTNFAVVTWS 345

Query: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLK+PF EVFGG  CNLKEAVEMAGL+WQGRAH
Sbjct: 346 NWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVWCNLKEAVEMAGLAWQGRAH 405

Query: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360
           CGLDDAKNTARLLA LMHRGF+FSITNSLMWQ +D P  WKQ P    +FP   P K + 
Sbjct: 406 CGLDDAKNTARLLAFLMHRGFKFSITNSLMWQATDHPESWKQSPELS-SFPEYHPQKLRE 465

Query: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417
             IP+FHYHPYC CGV+SS+GMVRKPGPKQGSFFFGCGNWTA +GARCHYF+WASP
Sbjct: 466 PTIPLFHYHPYCYCGVKSSKGMVRKPGPKQGSFFFGCGNWTAARGARCHYFEWASP 520

The following BLAST results are available for this feature:

BLAST of Carg20559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537711.1	1.3e-257	99.76	3'-5' exoribonuclease 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022951243.1	2.2e-257	99.76	3'-5' exoribonuclease 1-like isoform X2 [Cucurbita moschata] >XP_022951244.1 3'-...	[more]
XP_023002623.1	3.8e-257	99.52	uncharacterized protein LOC111496425 isoform X2 [Cucurbita maxima]	[more]
XP_023002622.1	1.8e-254	98.55	uncharacterized protein LOC111496425 isoform X1 [Cucurbita maxima]	[more]
XP_023537710.1	1.8e-254	98.55	3'-5' exoribonuclease 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg20559 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15140.1	3.7e-20	27.32	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of Carg20559 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A8K979\|ERI2_HUMAN	5.2e-40	42.18	ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2	[more]
sp\|Q5HZL1\|ERI2_XENLA	1.5e-39	40.95	ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1	[more]
sp\|Q5BKS4\|ERI2_MOUSE	8.3e-38	39.34	ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1	[more]
sp\|A6QLH5\|ERI3_BOVIN	2.3e-35	39.90	ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1	[more]
sp\|O43414\|ERI3_HUMAN	2.3e-35	39.90	ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2	[more]

BLAST of Carg20559 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BCJ6\|A0A1S3BCJ6_CUCME	1.1e-231	90.38	3'-5' exoribonuclease 1-like OS=Cucumis melo OX=3656 GN=LOC103488427 PE=4 SV=1	[more]
tr\|A0A0A0KDW9\|A0A0A0KDW9_CUCSA	5.3e-231	90.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399780 PE=4 SV=1	[more]
tr\|A0A2P6SAC4\|A0A2P6SAC4_ROSCH	7.7e-190	75.24	Putative ribonuclease H-like domain-containing protein OS=Rosa chinensis OX=7464...	[more]
tr\|A0A251L522\|A0A251L522_MANES	1.7e-189	75.00	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G156500 PE=4 SV=...	[more]
tr\|D7TX74\|D7TX74_VITVI	1.9e-188	74.76	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0084g00580 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR036397	RNaseH_sf
IPR010666	Znf_GRF
IPR013520	Exonuclease_RNaseT/DNA_pol3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20559-RA	Carg20559-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	PANTHER	PTHR23044:SF35	SUBFAMILY NOT NAMED	coord: 10..416
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 10..416
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 141..317 e-value: 2.63913E-66 score: 210.54
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 140..322 e-value: 2.0E-18 score: 77.2
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 142..313 e-value: 4.6E-26 score: 92.2
IPR010666	Zinc finger, GRF-type	PFAM	PF06839	zf-GRF	coord: 370..414 e-value: 7.5E-6 score: 25.9
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 130..344 e-value: 6.0E-73 score: 247.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 138..327

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20559	Cla022067	Watermelon (97103) v1	carwmB0649
Carg20559	Csa6G399780	Cucumber (Chinese Long) v2	carcuB0671
Carg20559	MELO3C011380	Melon (DHL92) v3.5.1	carmeB0649
Carg20559	ClCG08G010820	Watermelon (Charleston Gray)	carwcgB0633
Carg20559	CSPI06G20690	Wild cucumber (PI 183967)	carcpiB0681
Carg20559	Cucsa.005040	Cucumber (Gy14) v1	carcgyB0724
Carg20559	CmaCh05G004740	Cucurbita maxima (Rimu)	carcmaB0921
Carg20559	CmaCh12G001340	Cucurbita maxima (Rimu)	carcmaB0920
Carg20559	CmoCh05G004970	Cucurbita moschata (Rifu)	carcmoB0894
Carg20559	CmoCh12G001080	Cucurbita moschata (Rifu)	carcmoB0893
Carg20559	Lsi08G009360	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20559	Cp4.1LG11g04120	Cucurbita pepo (Zucchini)	carcpeB0924
Carg20559	Cp4.1LG07g01120	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20559	CsGy6G020060	Cucumber (Gy14) v2	carcgybB0647
Carg20559	MELO3C011380.2	Melon (DHL92) v3.6.1	carmedB0659
Carg20559	CsaV3_6G035720	Cucumber (Chinese Long) v3	carcucB0683
Carg20559	Cla97C08G153710	Watermelon (97103) v2	carwmbB0679
Carg20559	Bhi04G000601	Wax gourd	carwgoB0765

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20559	Carg09237	Silver-seed gourd	carcarB164

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20559	Wax gourd	carwgoB0764