Carg20529 (gene) Silver-seed gourd

NameCarg20529
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCytochrome c oxidase subunit
LocationCucurbita_argyrosperma_scaffold_113 : 104764 .. 108843 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTCTTCCTCCTTCGTTTGCCCTTCCTGCTGCCGCCTCTGTTGTCCAATCGTTGCGCTTCTAGCTGCAACTGGAGCGGATCGCTTCTTCTTCTTTCATCCATGGCGGAAGCGCAGAGCGAAAAAGCCCCGTCCTTAGCTGAGGTTTTTTTTATTATTATTTTTTTTTTTTAGAGCTTTAACAGTCTCGAATTTCTTCGTAAATCCTAAATCTTTGTTTTAGCTTCGTTATTCCTTCTTTTTTGCAATCTAGATCGATTTAGAATTGATTTTGATAGATCGAATGTTATACAGCAGGAATTCTTCAATTATGAAGATACGTGGAGTTTTTTTCTGTTGTAAATTCGAACTTCTTAGTGTTGAGGAAATAATTGAAGAACGGTAGTAAATTCTCTGGATTAGATCCCCCGGTTCCATATGAAATAATACTGAGTTTTTTTAGCATGATTGGATTGCCAGGTTGTTCACCTTCGAGTTCTGGTGGGTTTAATTTACTGTCTGTTTATTATTTGCTGTTAAAAGATCAATGTGTTTCACCAAGTTCGAAAGATCTTTATCAACGAGCTCAACCTTTTGCCTGATTTTTCATTGGAATGGAAGCTGAGAATCATTAAGGATCATATCTTCCCGCTGAAAATCGTTTCTTGATTTAGCTATGGCTTCACCGAACTGCTCTGTAGAAAAGAGAGAAGAAAAGAAACGGGCTTGAGCTGCTTGGTTTACGTGAGGAATCTCAATGAATTCAAAGTTAATATTTAGTGAGTTTTATGTGACATTCCACAACGGTTGGAAAGGTGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTATAGATGTGTTTTAAAACTGTGAGATTGACAGCAATACATAACGGGCCGAAGCGGACAATATTTGCTTGCGGTGGGTTTGAGCGTTATAAATGTTATCAAATCTAGGCACCGAGCGGTGTGCCAACGAGGATGCTAGGTCCCAAAGGTCCCAAAAGAAGGTGGATTGTGAGATCCCACATCGATTGGGGGAGAGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGTGTTTTAAAACCGTGAGGCTAACAGCGATACGTAATGGGCCGAAGCAGACAATATCCGCTAGCGATGGGCTTGAGCTGTTACATTTTACCTTGTGACTTCTCTACAATGATTTGTCATGCTCATCTAGAGGAACATTTCATAGAGACTGACCTCTTTTCTTTTACCAAGTCAGTATCATAATGTTCATATTTGAGAATTGGGGATAACTTTCTGTTAATTTGGCTTTCAGCAATATTCATTGGAAGATAAAGTGGAGAAGGTGGATATAGCAGAGCCCTCTGAAGTGAAAGAGGTAGAGAACTCAGAAAATGTTCCTCCTCCTGCAGAAGTTGTTGTGAAGAATGACGACCCACCTGTTGAAGCCGATGCTGCCGATCAAGGCGGTGACAACACTCCTGTCGATGAAAACAATGAAGATGCATCGGCAGCTGCTGCTGAGCAAGAAAGCAGCGGAGCCGGAGACGAGGAAAATTCTGGTGATCAAGAAAGCAGCAATGAGGCACCTGAGATTAAGGTTGTTGCCGACACTGATGATCAACAATGCTATCGTTCGTTTTTTAATTCATGACATTATTAAGGCATCTTTTAGTTTGTTTGTTCATATTATTTGGTTTGCTCATTTGCAGCTTGAAACAGCTCCAGCAGATTTCCGGTTCCCTACTACAAATCAAACTAGGCATTGCTTCACTCGCTATATTGAGTACCATCGGTAATTTTTAATGTTCTTTTCTTCATTTCTTGTCTCTTCTTAGGCCTTATTTGATAAGCTTCTGAATCTTTTGAGAATTAAGCTTATAATTACTAGTGTTAAGCCTGTAGATTTCATTGTCTTTGCTGTTGCTATTATCTTGGCCACGAATTCAAATGTTTCTTAAAAGTCGAAAACAAGTCAAATATACGTCTTTGCTATTGTCTTGGCCAAGAATTCAAATGTTTCTTAAAAGTCGAAAACAAGTCAAATATACGTCTTTGCTATTGTCTTGGCCAAGAATTCAAATGTTTCTTAAACGTCGAAAACAAGGCAAATGTATGTCTTTGCTATTGTTTTGTCCATGAATTCCGATGTTTCTTAAAAGTCGAACACAAGGCAATTGTATATCTTTGCTATTGTTTTGGCCAAGGATTCAATTGTTTCTTAAACGTCGCAAGTAAAATATACGTCTTTGCTATTCTTTTGGTCAAGAATTCATATGTTTCTTAAACGTAAAAAACAAGGTAAATGTACGTCTTTTCTATTGTTTTGACCCAGAATTCAAATGGTTAGCTGAAGTTTCTTTGTGATGCGTACAGATGCATACAAGCGAAAGGGGAAGGTGCTCCAGAGTGTGACAAATTTGCAAAATACTATCGTTCTCTATGCCCAACTGAATGGGTATGCTTTCAAATGACTCGATGTGTATGCGTGTGCGTGTGCGTGTTTCATTTCATTACTAAAGCTGTGTGTTGTGATAATTGTTGCAGGTAGAGAGGTGGAATGAGCAAAGGGAGAACGGCACCTTCCCAGGTCCACTGTAGGAGTTAAGCCACACGCTGCCCTTAAATTCCAAATAAACTATCTCCTCAAACAATTGAGTTCATAATTTCCGGCTGGTTTTTGGTCTTTTATTCAAAATCCAATTTCAGCCAAGTTTGTTGATGCGACTATCCCCTGTTTCTTCAATGATTATGTTCCAATCCAATAAGACAATGAAGAAATTTAAAGATCAAACTCAATTTGATTGGAAGAATCGATGAACTACGCATTTGAACTTCACAAACTATGACATTCAAAGTTAAACTAAGATTGTGTTTATAGTTGCAAAAAGCTCAATTTTTACACATCGGTTGAGATTGGAGCACAGGAAAAATATTATATTGATGATGCATCGAGTAATTTGGGAAGCTGGTTAAGCTCTTTCCCCACGAATTCTTCTGGCAAGTTGAATATCTTTCGGCATTATTGTAACGCGCTTGGCATGAATGGCGCAGAGGTTGGTGTCTTCGAACAGCCCAACCAGGTAAGCTTCAGCCGCCTCTTGCAAAGCCAAAACCGCGTGGCTTTGGAACCGCAGATCTGTCTTGAAATCCTGTGCAATTTCACGAACAAGCCTCTGGAATGGGAGCTTGCGAATTAGAAGCTCTGTGCTCTTCTGGTACTTGCGAATTTCTCTGCAACACATTACATTAAAACGACGCCATGAGATTTCGTATGAACAAGATAACCATTAATGATCTGTGGTATGAACAACGATTATAGATAAAAGGTTACACACCGAAGAGCAACTGTTCCTGGGCGGTATCTGTGTGGTTTCTTCACGCCTCCAGTAGTTGGGGCGGACTTGCGCGCAGCCTATGAAAATATTGGTAATGGCGACAATTGTATTAGGGTTAGGGTTAAGAAACAAATGTCAATGAGCATTGAGAATTTAGGTTCCAATCTTCCACGTTCATACCTTAGTAGCAAGCTGCTTCCTGGGAGCTTTTCCACCAGTGGATTTGCGAGCGGTTTGCTTGGTACGAGCCATCTGCATAGACAACGCTCAATCAAAACAAAACAGATTGCTAAAACAACTTCATTAAAATCGCGTTCCGCTCCGTTTCCCAATTAGAATGATCAAGAACATCTGACGATTGTTCTATAATCAATAAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTTGACGAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTGGACGAATTCTTCGATTATTATGTTTAGGTTTCAAAAGAAGTAGTCATACCAAATCGACTCCAGAAAGTAAAGCTAATCATCAATTATAATCTATTAGAAAGAATTTGAGCAGAAAACCAGAACACATCGAAAGTGATCATACCAAGCAATTGCAAGAAAAGAAAAGGAAGATTAAGGAGGCGAAGAGAAGCTAACCTGGACGGCGAAGAGGCGCTTGAGAACCGAGAGAGAATTGAGGAGCTCGAATAGATTGGGA

mRNA sequence

AGTTTCTTCCTCCTTCGTTTGCCCTTCCTGCTGCCGCCTCTGTTGTCCAATCGTTGCGCTTCTAGCTGCAACTGGAGCGGATCGCTTCTTCTTCTTTCATCCATGGCGGAAGCGCAGAGCGAAAAAGCCCCGTCCTTAGCTGAGCAATATTCATTGGAAGATAAAGTGGAGAAGGTGGATATAGCAGAGCCCTCTGAAGTGAAAGAGGTAGAGAACTCAGAAAATGTTCCTCCTCCTGCAGAAGTTGTTGTGAAGAATGACGACCCACCTGTTGAAGCCGATGCTGCCGATCAAGGCGGTGACAACACTCCTGTCGATGAAAACAATGAAGATGCATCGGCAGCTGCTGCTGAGCAAGAAAGCAGCGGAGCCGGAGACGAGGAAAATTCTGGTGATCAAGAAAGCAGCAATGAGGCACCTGAGATTAAGCTTGAAACAGCTCCAGCAGATTTCCGGTTCCCTACTACAAATCAAACTAGGCATTGCTTCACTCGCTATATTGAGTACCATCGATGCATACAAGCGAAAGGGGAAGGTGCTCCAGAGTGTGACAAATTTGCAAAATACTATCGTTCTCTATGCCCAACTGAATGGGTAGAGAGGTGGAATGAGCAAAGGGAGAACGGCACCTTCCCAGGTCCACTGTAGGAGTTAAGCCACACGCTGCCCTTAAATTCCAAATAAACTATCTCCTCAAACAATTGAGTTCATAATTTCCGGCTGGTTTTTGGTCTTTTATTCAAAATCCAATTTCAGCCAAGTTTGTTGATGCGACTATCCCCTGTTTCTTCAATGATTATGTTCCAATCCAATAAGACAATGAAGAAATTTAAAGATCAAACTCAATTTGATTGGAAGAATCGATGAACTACGCATTTGAACTTCACAAACTATGACATTCAAAGTTAAACTAAGATTGTGTTTATAGTTGCAAAAAGCTCAATTTTTACACATCGGTTGAGATTGGAGCACAGGAAAAATATTATATTGATGATGCATCGAGTAATTTGGGAAGCTGGTTAAGCTCTTTCCCCACGAATTCTTCTGGCAAGTTGAATATCTTTCGGCATTATTGTAACGCGCTTGGCATGAATGGCGCAGAGGTTGGTGTCTTCGAACAGCCCAACCAGGTAAGCTTCAGCCGCCTCTTGCAAAGCCAAAACCGCGTGGCTTTGGAACCGCAGATCTGTCTTGAAATCCTGTGCAATTTCACGAACAAGCCTCTGGAATGGGAGCTTGCGAATTAGAAGCTCTGTGCTCTTCTGGTACTTGCGAATTTCTCTGCAACACATTACATTAAAACGACGCCATGAGATTTCGTATGAACAAGATAACCATTAATGATCTGTGGTATGAACAACGATTATAGATAAAAGGTTACACACCGAAGAGCAACTGTTCCTGGGCGGTATCTGTGTGGTTTCTTCACGCCTCCAGTAGTTGGGGCGGACTTGCGCGCAGCCTATGAAAATATTGGTAATGGCGACAATTGTATTAGGGTTAGGGTTAAGAAACAAATGTCAATGAGCATTGAGAATTTAGGTTCCAATCTTCCACGTTCATACCTTAGTAGCAAGCTGCTTCCTGGGAGCTTTTCCACCAGTGGATTTGCGAGCGGTTTGCTTGGTACGAGCCATCTGCATAGACAACGCTCAATCAAAACAAAACAGATTGCTAAAACAACTTCATTAAAATCGCGTTCCGCTCCGTTTCCCAATTAGAATGATCAAGAACATCTGACGATTGTTCTATAATCAATAAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTTGACGAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTGGACGAATTCTTCGATTATTATGTTTAGGTTTCAAAAGAAGTAGTCATACCAAATCGACTCCAGAAAGTAAAGCTAATCATCAATTATAATCTATTAGAAAGAATTTGAGCAGAAAACCAGAACACATCGAAAGTGATCATACCAAGCAATTGCAAGAAAAGAAAAGGAAGATTAAGGAGGCGAAGAGAAGCTAACCTGGACGGCGAAGAGGCGCTTGAGAACCGAGAGAGAATTGAGGAGCTCGAATAGATTGGGA

Coding sequence (CDS)

ATGGCGGAAGCGCAGAGCGAAAAAGCCCCGTCCTTAGCTGAGCAATATTCATTGGAAGATAAAGTGGAGAAGGTGGATATAGCAGAGCCCTCTGAAGTGAAAGAGGTAGAGAACTCAGAAAATGTTCCTCCTCCTGCAGAAGTTGTTGTGAAGAATGACGACCCACCTGTTGAAGCCGATGCTGCCGATCAAGGCGGTGACAACACTCCTGTCGATGAAAACAATGAAGATGCATCGGCAGCTGCTGCTGAGCAAGAAAGCAGCGGAGCCGGAGACGAGGAAAATTCTGGTGATCAAGAAAGCAGCAATGAGGCACCTGAGATTAAGCTTGAAACAGCTCCAGCAGATTTCCGGTTCCCTACTACAAATCAAACTAGGCATTGCTTCACTCGCTATATTGAGTACCATCGATGCATACAAGCGAAAGGGGAAGGTGCTCCAGAGTGTGACAAATTTGCAAAATACTATCGTTCTCTATGCCCAACTGAATGGGTAGAGAGGTGGAATGAGCAAAGGGAGAACGGCACCTTCCCAGGTCCACTGTAG

Protein sequence

MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVPPPAEVVVKNDDPPVEADAADQGGDNTPVDENNEDASAAAAEQESSGAGDEENSGDQESSNEAPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPGPL
BLAST of Carg20529 vs. NCBI nr
Match: XP_022951612.1 (cytochrome c oxidase subunit 6b-1-like [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVXXXXXXXXXXXXXXXXXX 60
           MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFRFP 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFRFP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFRFP 120

Query: 121 TTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPGP 180
           TTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPGP
Sbjct: 121 TTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPGP 180

Query: 181 L 182
           L
Sbjct: 181 L 181

BLAST of Carg20529 vs. NCBI nr
Match: XP_023002728.1 (cytochrome c oxidase subunit 6b-1-like [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENV---XXXXXXXXXXXXXXX 60
           MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENV   XXXXXXXXXXXXXXX
Sbjct: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADF 120

Query: 121 RFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTF 180
           RFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCP+EWVERWNEQRENGTF
Sbjct: 121 RFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPSEWVERWNEQRENGTF 180

Query: 181 PGPL 182
           PGPL
Sbjct: 181 PGPL 184

BLAST of Carg20529 vs. NCBI nr
Match: XP_023537220.1 (cytochrome c oxidase subunit 6b-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENV--XXXXXXXXXXXXXXXX 60
           MAEAQSE APSLAEQYSLEDKVEKVDIAEPSEVKEVENSENV  XXXXXXXXXXXXXXXX
Sbjct: 1   MAEAQSENAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFR 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFR 120

Query: 121 FPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFP 180
           FPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCP+EWVERWNEQRENGTFP
Sbjct: 121 FPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPSEWVERWNEQRENGTFP 180

Query: 181 GPL 182
           GPL
Sbjct: 181 GPL 183

BLAST of Carg20529 vs. NCBI nr
Match: XP_022997269.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 4.3e-48
Identity = 143/182 (78.57%), Postives = 149/182 (81.87%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSEN-VXXXXXXXXXXXXXXXXX 60
           MAEAQSEK PSL+EQYSL++K EKVDI +PSEVKEVENSEN                   
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDILKPSEVKEVENSENAAPAEIVVKNDEPPVEADA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFRF 120
              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     E PEIKLETAPADFRF
Sbjct: 61  DKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQESTDEQPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRC QAKGEGAPECDKFAKYYRSLCP+EWVE+WNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPSEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

BLAST of Carg20529 vs. NCBI nr
Match: XP_022962484.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 5.6e-48
Identity = 153/182 (84.07%), Postives = 159/182 (87.36%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSEN-VXXXXXXXXXXXXXXXXX 60
           MAEAQSEK PSL+EQYSL++K EKVDI +PSEV+EVENSEN V         XXXXXXXX
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVEEVENSENAVPAEVVVKNDXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPADFRF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      E PEIKLETAPADFRF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQESTDERPEIKLETAPADFRF 120

Query: 121 PTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPG 180
           PTTNQTRHCFTRYIEYHRC QAKGEGAPECDKFAKYYRSLCP EWVE+WNEQRENG FPG
Sbjct: 121 PTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENGCFPG 180

Query: 181 PL 182
           PL
Sbjct: 181 PL 182

BLAST of Carg20529 vs. TAIR10
Match: AT1G22450.1 (cytochrome C oxidase 6B)

HSP 1 Score: 161.8 bits (408), Expect = 4.0e-40
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 107 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 166
           EIKLETAPADFRFPTTNQTRHCFTRY+EYHRC+ AKG+ APECDKFAK+YRSLCP+EWV+
Sbjct: 116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVD 175

Query: 167 RWNEQRENGTFPGPL 182
           RWNEQRENGTFPGPL
Sbjct: 176 RWNEQRENGTFPGPL 190

BLAST of Carg20529 vs. TAIR10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0

Query: 107 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 166
           EI+L+TAPADFRFPTTNQTRHCFTRYIE+HRC  AKGE A EC++FAKYYR+LCP EWV+
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVD 63

Query: 167 RWNEQRENGTFPGPL 182
           +WNEQRE GTFPGPL
Sbjct: 64  KWNEQRETGTFPGPL 78

BLAST of Carg20529 vs. TAIR10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein)

HSP 1 Score: 144.4 bits (363), Expect = 6.7e-35
Identity = 59/75 (78.67%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 107 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 166
           EI+L+TAPADFRFPTTNQTRHCFTRYIE+HRC  AKGE + +C++FAKYYR+LCP EWV+
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVD 63

Query: 167 RWNEQRENGTFPGPL 182
           +WNEQRE+GTFPGPL
Sbjct: 64  KWNEQRESGTFPGPL 78

BLAST of Carg20529 vs. TAIR10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 113 APADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVER-WNEQ 172
           A  + RFP TN+TRHCF R+++YH+CI+  G  A +C+    Y RS+CP E V + W + 
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELVSKIWLKS 118

Query: 173 REN 175
             N
Sbjct: 119 GRN 121

BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q9S7L9|CX6B1_ARATH (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.3e-39
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 107 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 166
           EIKLETAPADFRFPTTNQTRHCFTRY+EYHRC+ AKG+ APECDKFAK+YRSLCP+EWV+
Sbjct: 116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVD 175

Query: 167 RWNEQRENGTFPGPL 182
           RWNEQRENGTFPGPL
Sbjct: 176 RWNEQRENGTFPGPL 190

BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q9SUD3|CX6B3_ARATH (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-34
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0

Query: 107 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 166
           EI+L+TAPADFRFPTTNQTRHCFTRYIE+HRC  AKGE A EC++FAKYYR+LCP EWV+
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVD 63

Query: 167 RWNEQRENGTFPGPL 182
           +WNEQRE GTFPGPL
Sbjct: 64  KWNEQRETGTFPGPL 78

BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q945L0|CX6B2_ARATH (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 59/75 (78.67%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 107 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 166
           EI+L+TAPADFRFPTTNQTRHCFTRYIE+HRC  AKGE + +C++FAKYYR+LCP EWV+
Sbjct: 4   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVD 63

Query: 167 RWNEQRENGTFPGPL 182
           +WNEQRE+GTFPGPL
Sbjct: 64  KWNEQRESGTFPGPL 78

BLAST of Carg20529 vs. Swiss-Prot
Match: sp|O94581|COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 9.5e-23
Identity = 48/79 (60.76%), Postives = 56/79 (70.89%), Query Frame = 0

Query: 104 EAP-EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPT 163
           EAP +    T   D RFP TNQT+HCF  YI+Y RCI+AKGE    C +F   Y+SLCP 
Sbjct: 8   EAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPM 67

Query: 164 EWVERWNEQRENGTFPGPL 182
           EWVERW+EQRENGTFP P+
Sbjct: 68  EWVERWDEQRENGTFPAPI 86

BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q01519|COX12_YEAST (Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX12 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 110 LETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWN 169
           L T   D RFP  NQT+HC+  Y++YH+C+  KGE    C  F K Y +LCP +W+E+W+
Sbjct: 9   LHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWD 68

Query: 170 EQRENGTFPGPL 182
           +QRE G F G +
Sbjct: 69  DQREKGIFAGDI 80

BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A0A0LNV6|A0A0A0LNV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.0e-46
Identity = 145/195 (74.36%), Postives = 155/195 (79.49%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSEN--------------VXXXX 60
           MAEAQS++ PSL+EQYSL++K EKVDI +PSEVKEVENSEN              V    
Sbjct: 1   MAEAQSQQTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAP 120
                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE P
Sbjct: 61  DQSSDIPPAEESNGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERP 120

Query: 121 EIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVE 180
           EIKLETAP DFRFPTTNQTRHCFTRYIE+HRC QAKGEGAPEC+KFAKYYRSLCP+EWVE
Sbjct: 121 EIKLETAPVDFRFPTTNQTRHCFTRYIEFHRCTQAKGEGAPECEKFAKYYRSLCPSEWVE 180

Query: 181 RWNEQRENGTFPGPL 182
           +WNEQRENGTFPGPL
Sbjct: 181 KWNEQRENGTFPGPL 195

BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A1S3BC78|A0A1S3BC78_CUCME (cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-45
Identity = 141/190 (74.21%), Postives = 148/190 (77.89%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENV---------XXXXXXXXX 60
           MAEAQSE+  SLAEQYSL++K EKVDI  PSEVKEVEN+EN                   
Sbjct: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLE 120
                  XXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE PEIKLE
Sbjct: 61  DQSSDNPXXXESPAVEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPEIKLE 120

Query: 121 TAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQ 180
           TAP DFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC+KFAKYYRSLCP+EWVE+WNEQ
Sbjct: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180

Query: 181 RENGTFPGPL 182
           RENGTFPGPL
Sbjct: 181 RENGTFPGPL 190

BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A1R3K2G3|A0A1R3K2G3_9ROSI (Cytochrome c oxidase, subunit VIb OS=Corchorus olitorius OX=93759 GN=COLO4_12018 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43
Identity = 145/186 (77.96%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVEN-----SENVXXXXXXXXXXXXX 60
           MA+AQ+E+ PSL+EQY L++K EK D+ +  EVKEVEN     SE V             
Sbjct: 1   MADAQTEQPPSLSEQYLLKEKEEKADVTKSEEVKEVENPVSAVSEEVVPEKVEETPAAPV 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPA 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PEIKLETAPA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEIKLETAPA 120

Query: 121 DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENG 180
           DFRFPTTNQTRHCFTRYIEYHRC+ AKGEGAPECDKFAKYYRSLCP EW++RWNEQRENG
Sbjct: 121 DFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRSLCPGEWIDRWNEQRENG 180

Query: 181 TFPGPL 182
           TFPGPL
Sbjct: 181 TFPGPL 186

BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A1R3JI33|A0A1R3JI33_COCAP (Cytochrome c oxidase, subunit VIb OS=Corchorus capsularis OX=210143 GN=CCACVL1_05975 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 144/186 (77.42%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVEN-----SENVXXXXXXXXXXXXX 60
           MA+AQ+E+ PSL+EQY L++K EK D+++P EVKEVEN     SE V             
Sbjct: 1   MADAQTEQPPSLSEQYLLKEKEEKADVSKPDEVKEVENPVSAVSEEVVPEKVEETPAAPV 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAPA 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EIKLETAPA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKLETAPA 120

Query: 121 DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENG 180
           DFRFPTTNQTRHCFTRYIEYHRC+ AKGE APECDKFAKYYRSLCP EW++RWNEQRENG
Sbjct: 121 DFRFPTTNQTRHCFTRYIEYHRCVAAKGEDAPECDKFAKYYRSLCPGEWIDRWNEQRENG 180

Query: 181 TFPGPL 182
           TFPGPL
Sbjct: 181 TFPGPL 186

BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A061FF28|A0A061FF28_THECC (Cytochrome C oxidase polypeptide vib, putative OS=Theobroma cacao OX=3641 GN=TCM_034860 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.9e-42
Identity = 148/187 (79.14%), Postives = 160/187 (85.56%), Query Frame = 0

Query: 1   MAEAQSEKAPSLAEQYSLEDKVEKVDIA-EPSEVKEVEN-----SENVXXXXXXXXXXXX 60
           MAEAQ++K  SL+EQY L++K EK D+A +P+EVKEVE+     SE V           X
Sbjct: 1   MAEAQTDKPLSLSEQYLLKEKEEKSDVATKPAEVKEVESPVNAASEEVVIEKVEETPASX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPEIKLETAP 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PEIKLETAP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEIKLETAP 120

Query: 121 ADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQREN 180
           ADFRFPTTNQTRHCFTRYIEYHRC+ AKGEGAPECDKFAKYYRSLCP EW++RWNEQREN
Sbjct: 121 ADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRSLCPGEWIDRWNEQREN 180

Query: 181 GTFPGPL 182
           GTFPGPL
Sbjct: 181 GTFPGPL 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022951612.13.3e-56100.00cytochrome c oxidase subunit 6b-1-like [Cucurbita moschata][more]
XP_023002728.14.0e-5497.83cytochrome c oxidase subunit 6b-1-like [Cucurbita maxima][more]
XP_023537220.11.2e-5397.81cytochrome c oxidase subunit 6b-1-like [Cucurbita pepo subsp. pepo][more]
XP_022997269.14.3e-4878.57cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita maxima][more]
XP_022962484.15.6e-4884.07cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G22450.14.0e-4089.33cytochrome C oxidase 6B[more]
AT4G28060.11.3e-3581.33Cytochrome c oxidase, subunit Vib family protein[more]
AT5G57815.16.7e-3578.67Cytochrome c oxidase, subunit Vib family protein[more]
AT1G32710.11.6e-1244.44Cytochrome c oxidase, subunit Vib family protein[more]
Match NameE-valueIdentityDescription
sp|Q9S7L9|CX6B1_ARATH7.3e-3989.33Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=... [more]
sp|Q9SUD3|CX6B3_ARATH2.4e-3481.33Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=... [more]
sp|Q945L0|CX6B2_ARATH1.2e-3378.67Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=... [more]
sp|O94581|COX12_SCHPO9.5e-2360.76Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe (strain 972 / ATCC ... [more]
sp|Q01519|COX12_YEAST1.6e-1747.22Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae (strain ATCC 204508 ... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LNV6|A0A0A0LNV6_CUCSA6.0e-4674.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1[more]
tr|A0A1S3BC78|A0A1S3BC78_CUCME3.9e-4574.21cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 P... [more]
tr|A0A1R3K2G3|A0A1R3K2G3_9ROSI3.6e-4377.96Cytochrome c oxidase, subunit VIb OS=Corchorus olitorius OX=93759 GN=COLO4_12018... [more]
tr|A0A1R3JI33|A0A1R3JI33_COCAP1.8e-4277.42Cytochrome c oxidase, subunit VIb OS=Corchorus capsularis OX=210143 GN=CCACVL1_0... [more]
tr|A0A061FF28|A0A061FF28_THECC8.9e-4279.14Cytochrome C oxidase polypeptide vib, putative OS=Theobroma cacao OX=3641 GN=TCM... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR036549Cyt_c_oxidase_su6B_sf
IPR003213Cyt_c_oxidase_su6B
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20529-RACarg20529-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 118..177
e-value: 3.4E-17
score: 62.4
IPR003213Cytochrome c oxidase, subunit VIbPANTHERPTHR11387CYTOCHROME C OXIDASE POLYPEPTIDE VIBcoord: 66..181
IPR003213Cytochrome c oxidase, subunit VIbCDDcd00926Cyt_c_Oxidase_VIbcoord: 106..180
e-value: 6.92329E-41
score: 133.973
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3DG3DSA:1.10.10.140coord: 101..181
e-value: 1.4E-35
score: 123.5
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILYSSF47694Cytochrome c oxidase subunit hcoord: 107..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..36
NoneNo IPR availablePANTHERPTHR11387:SF30SUBFAMILY NOT NAMEDcoord: 66..181
NoneNo IPR availablePRODOMPD015172coord: 114..181
e-value: 6.0E-35
score: 367.0
NoneNo IPR availablePROSITEPS51808CHCHcoord: 125..168
score: 13.692