Carg20529 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTCTTCCTCCTTCGTTTGCCCTTCCTGCTGCCGCCTCTGTTGTCCAATCGTTGCGCTTCTAGCTGCAACTGGAGCGGATCGCTTCTTCTTCTTTCATCCATGGCGGAAGCGCAGAGCGAAAAAGCCCCGTCCTTAGCTGAGGTTTTTTTTATTATTATTTTTTTTTTTTAGAGCTTTAACAGTCTCGAATTTCTTCGTAAATCCTAAATCTTTGTTTTAGCTTCGTTATTCCTTCTTTTTTGCAATCTAGATCGATTTAGAATTGATTTTGATAGATCGAATGTTATACAGCAGGAATTCTTCAATTATGAAGATACGTGGAGTTTTTTTCTGTTGTAAATTCGAACTTCTTAGTGTTGAGGAAATAATTGAAGAACGGTAGTAAATTCTCTGGATTAGATCCCCCGGTTCCATATGAAATAATACTGAGTTTTTTTAGCATGATTGGATTGCCAGGTTGTTCACCTTCGAGTTCTGGTGGGTTTAATTTACTGTCTGTTTATTATTTGCTGTTAAAAGATCAATGTGTTTCACCAAGTTCGAAAGATCTTTATCAACGAGCTCAACCTTTTGCCTGATTTTTCATTGGAATGGAAGCTGAGAATCATTAAGGATCATATCTTCCCGCTGAAAATCGTTTCTTGATTTAGCTATGGCTTCACCGAACTGCTCTGTAGAAAAGAGAGAAGAAAAGAAACGGGCTTGAGCTGCTTGGTTTACGTGAGGAATCTCAATGAATTCAAAGTTAATATTTAGTGAGTTTTATGTGACATTCCACAACGGTTGGAAAGGTGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTATAGATGTGTTTTAAAACTGTGAGATTGACAGCAATACATAACGGGCCGAAGCGGACAATATTTGCTTGCGGTGGGTTTGAGCGTTATAAATGTTATCAAATCTAGGCACCGAGCGGTGTGCCAACGAGGATGCTAGGTCCCAAAGGTCCCAAAAGAAGGTGGATTGTGAGATCCCACATCGATTGGGGGAGAGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGTGTTTTAAAACCGTGAGGCTAACAGCGATACGTAATGGGCCGAAGCAGACAATATCCGCTAGCGATGGGCTTGAGCTGTTACATTTTACCTTGTGACTTCTCTACAATGATTTGTCATGCTCATCTAGAGGAACATTTCATAGAGACTGACCTCTTTTCTTTTACCAAGTCAGTATCATAATGTTCATATTTGAGAATTGGGGATAACTTTCTGTTAATTTGGCTTTCAGCAATATTCATTGGAAGATAAAGTGGAGAAGGTGGATATAGCAGAGCCCTCTGAAGTGAAAGAGGTAGAGAACTCAGAAAATGTTCCTCCTCCTGCAGAAGTTGTTGTGAAGAATGACGACCCACCTGTTGAAGCCGATGCTGCCGATCAAGGCGGTGACAACACTCCTGTCGATGAAAACAATGAAGATGCATCGGCAGCTGCTGCTGAGCAAGAAAGCAGCGGAGCCGGAGACGAGGAAAATTCTGGTGATCAAGAAAGCAGCAATGAGGCACCTGAGATTAAGGTTGTTGCCGACACTGATGATCAACAATGCTATCGTTCGTTTTTTAATTCATGACATTATTAAGGCATCTTTTAGTTTGTTTGTTCATATTATTTGGTTTGCTCATTTGCAGCTTGAAACAGCTCCAGCAGATTTCCGGTTCCCTACTACAAATCAAACTAGGCATTGCTTCACTCGCTATATTGAGTACCATCGGTAATTTTTAATGTTCTTTTCTTCATTTCTTGTCTCTTCTTAGGCCTTATTTGATAAGCTTCTGAATCTTTTGAGAATTAAGCTTATAATTACTAGTGTTAAGCCTGTAGATTTCATTGTCTTTGCTGTTGCTATTATCTTGGCCACGAATTCAAATGTTTCTTAAAAGTCGAAAACAAGTCAAATATACGTCTTTGCTATTGTCTTGGCCAAGAATTCAAATGTTTCTTAAAAGTCGAAAACAAGTCAAATATACGTCTTTGCTATTGTCTTGGCCAAGAATTCAAATGTTTCTTAAACGTCGAAAACAAGGCAAATGTATGTCTTTGCTATTGTTTTGTCCATGAATTCCGATGTTTCTTAAAAGTCGAACACAAGGCAATTGTATATCTTTGCTATTGTTTTGGCCAAGGATTCAATTGTTTCTTAAACGTCGCAAGTAAAATATACGTCTTTGCTATTCTTTTGGTCAAGAATTCATATGTTTCTTAAACGTAAAAAACAAGGTAAATGTACGTCTTTTCTATTGTTTTGACCCAGAATTCAAATGGTTAGCTGAAGTTTCTTTGTGATGCGTACAGATGCATACAAGCGAAAGGGGAAGGTGCTCCAGAGTGTGACAAATTTGCAAAATACTATCGTTCTCTATGCCCAACTGAATGGGTATGCTTTCAAATGACTCGATGTGTATGCGTGTGCGTGTGCGTGTTTCATTTCATTACTAAAGCTGTGTGTTGTGATAATTGTTGCAGGTAGAGAGGTGGAATGAGCAAAGGGAGAACGGCACCTTCCCAGGTCCACTGTAGGAGTTAAGCCACACGCTGCCCTTAAATTCCAAATAAACTATCTCCTCAAACAATTGAGTTCATAATTTCCGGCTGGTTTTTGGTCTTTTATTCAAAATCCAATTTCAGCCAAGTTTGTTGATGCGACTATCCCCTGTTTCTTCAATGATTATGTTCCAATCCAATAAGACAATGAAGAAATTTAAAGATCAAACTCAATTTGATTGGAAGAATCGATGAACTACGCATTTGAACTTCACAAACTATGACATTCAAAGTTAAACTAAGATTGTGTTTATAGTTGCAAAAAGCTCAATTTTTACACATCGGTTGAGATTGGAGCACAGGAAAAATATTATATTGATGATGCATCGAGTAATTTGGGAAGCTGGTTAAGCTCTTTCCCCACGAATTCTTCTGGCAAGTTGAATATCTTTCGGCATTATTGTAACGCGCTTGGCATGAATGGCGCAGAGGTTGGTGTCTTCGAACAGCCCAACCAGGTAAGCTTCAGCCGCCTCTTGCAAAGCCAAAACCGCGTGGCTTTGGAACCGCAGATCTGTCTTGAAATCCTGTGCAATTTCACGAACAAGCCTCTGGAATGGGAGCTTGCGAATTAGAAGCTCTGTGCTCTTCTGGTACTTGCGAATTTCTCTGCAACACATTACATTAAAACGACGCCATGAGATTTCGTATGAACAAGATAACCATTAATGATCTGTGGTATGAACAACGATTATAGATAAAAGGTTACACACCGAAGAGCAACTGTTCCTGGGCGGTATCTGTGTGGTTTCTTCACGCCTCCAGTAGTTGGGGCGGACTTGCGCGCAGCCTATGAAAATATTGGTAATGGCGACAATTGTATTAGGGTTAGGGTTAAGAAACAAATGTCAATGAGCATTGAGAATTTAGGTTCCAATCTTCCACGTTCATACCTTAGTAGCAAGCTGCTTCCTGGGAGCTTTTCCACCAGTGGATTTGCGAGCGGTTTGCTTGGTACGAGCCATCTGCATAGACAACGCTCAATCAAAACAAAACAGATTGCTAAAACAACTTCATTAAAATCGCGTTCCGCTCCGTTTCCCAATTAGAATGATCAAGAACATCTGACGATTGTTCTATAATCAATAAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTTGACGAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTGGACGAATTCTTCGATTATTATGTTTAGGTTTCAAAAGAAGTAGTCATACCAAATCGACTCCAGAAAGTAAAGCTAATCATCAATTATAATCTATTAGAAAGAATTTGAGCAGAAAACCAGAACACATCGAAAGTGATCATACCAAGCAATTGCAAGAAAAGAAAAGGAAGATTAAGGAGGCGAAGAGAAGCTAACCTGGACGGCGAAGAGGCGCTTGAGAACCGAGAGAGAATTGAGGAGCTCGAATAGATTGGGA AGTTTCTTCCTCCTTCGTTTGCCCTTCCTGCTGCCGCCTCTGTTGTCCAATCGTTGCGCTTCTAGCTGCAACTGGAGCGGATCGCTTCTTCTTCTTTCATCCATGGCGGAAGCGCAGAGCGAAAAAGCCCCGTCCTTAGCTGAGCAATATTCATTGGAAGATAAAGTGGAGAAGGTGGATATAGCAGAGCCCTCTGAAGTGAAAGAGGTAGAGAACTCAGAAAATGTTCCTCCTCCTGCAGAAGTTGTTGTGAAGAATGACGACCCACCTGTTGAAGCCGATGCTGCCGATCAAGGCGGTGACAACACTCCTGTCGATGAAAACAATGAAGATGCATCGGCAGCTGCTGCTGAGCAAGAAAGCAGCGGAGCCGGAGACGAGGAAAATTCTGGTGATCAAGAAAGCAGCAATGAGGCACCTGAGATTAAGCTTGAAACAGCTCCAGCAGATTTCCGGTTCCCTACTACAAATCAAACTAGGCATTGCTTCACTCGCTATATTGAGTACCATCGATGCATACAAGCGAAAGGGGAAGGTGCTCCAGAGTGTGACAAATTTGCAAAATACTATCGTTCTCTATGCCCAACTGAATGGGTAGAGAGGTGGAATGAGCAAAGGGAGAACGGCACCTTCCCAGGTCCACTGTAGGAGTTAAGCCACACGCTGCCCTTAAATTCCAAATAAACTATCTCCTCAAACAATTGAGTTCATAATTTCCGGCTGGTTTTTGGTCTTTTATTCAAAATCCAATTTCAGCCAAGTTTGTTGATGCGACTATCCCCTGTTTCTTCAATGATTATGTTCCAATCCAATAAGACAATGAAGAAATTTAAAGATCAAACTCAATTTGATTGGAAGAATCGATGAACTACGCATTTGAACTTCACAAACTATGACATTCAAAGTTAAACTAAGATTGTGTTTATAGTTGCAAAAAGCTCAATTTTTACACATCGGTTGAGATTGGAGCACAGGAAAAATATTATATTGATGATGCATCGAGTAATTTGGGAAGCTGGTTAAGCTCTTTCCCCACGAATTCTTCTGGCAAGTTGAATATCTTTCGGCATTATTGTAACGCGCTTGGCATGAATGGCGCAGAGGTTGGTGTCTTCGAACAGCCCAACCAGGTAAGCTTCAGCCGCCTCTTGCAAAGCCAAAACCGCGTGGCTTTGGAACCGCAGATCTGTCTTGAAATCCTGTGCAATTTCACGAACAAGCCTCTGGAATGGGAGCTTGCGAATTAGAAGCTCTGTGCTCTTCTGGTACTTGCGAATTTCTCTGCAACACATTACATTAAAACGACGCCATGAGATTTCGTATGAACAAGATAACCATTAATGATCTGTGGTATGAACAACGATTATAGATAAAAGGTTACACACCGAAGAGCAACTGTTCCTGGGCGGTATCTGTGTGGTTTCTTCACGCCTCCAGTAGTTGGGGCGGACTTGCGCGCAGCCTATGAAAATATTGGTAATGGCGACAATTGTATTAGGGTTAGGGTTAAGAAACAAATGTCAATGAGCATTGAGAATTTAGGTTCCAATCTTCCACGTTCATACCTTAGTAGCAAGCTGCTTCCTGGGAGCTTTTCCACCAGTGGATTTGCGAGCGGTTTGCTTGGTACGAGCCATCTGCATAGACAACGCTCAATCAAAACAAAACAGATTGCTAAAACAACTTCATTAAAATCGCGTTCCGCTCCGTTTCCCAATTAGAATGATCAAGAACATCTGACGATTGTTCTATAATCAATAAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTTGACGAATTCGAGGCAACTAATAGATTTAACCTACTTCTTCCTACTCCTTCAGAAAACTTTGGACGAATTCTTCGATTATTATGTTTAGGTTTCAAAAGAAGTAGTCATACCAAATCGACTCCAGAAAGTAAAGCTAATCATCAATTATAATCTATTAGAAAGAATTTGAGCAGAAAACCAGAACACATCGAAAGTGATCATACCAAGCAATTGCAAGAAAAGAAAAGGAAGATTAAGGAGGCGAAGAGAAGCTAACCTGGACGGCGAAGAGGCGCTTGAGAACCGAGAGAGAATTGAGGAGCTCGAATAGATTGGGA ATGGCGGAAGCGCAGAGCGAAAAAGCCCCGTCCTTAGCTGAGCAATATTCATTGGAAGATAAAGTGGAGAAGGTGGATATAGCAGAGCCCTCTGAAGTGAAAGAGGTAGAGAACTCAGAAAATGTTCCTCCTCCTGCAGAAGTTGTTGTGAAGAATGACGACCCACCTGTTGAAGCCGATGCTGCCGATCAAGGCGGTGACAACACTCCTGTCGATGAAAACAATGAAGATGCATCGGCAGCTGCTGCTGAGCAAGAAAGCAGCGGAGCCGGAGACGAGGAAAATTCTGGTGATCAAGAAAGCAGCAATGAGGCACCTGAGATTAAGCTTGAAACAGCTCCAGCAGATTTCCGGTTCCCTACTACAAATCAAACTAGGCATTGCTTCACTCGCTATATTGAGTACCATCGATGCATACAAGCGAAAGGGGAAGGTGCTCCAGAGTGTGACAAATTTGCAAAATACTATCGTTCTCTATGCCCAACTGAATGGGTAGAGAGGTGGAATGAGCAAAGGGAGAACGGCACCTTCCCAGGTCCACTGTAG MAEAQSEKAPSLAEQYSLEDKVEKVDIAEPSEVKEVENSENVPPPAEVVVKNDDPPVEADAADQGGDNTPVDENNEDASAAAAEQESSGAGDEENSGDQESSNEAPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPTEWVERWNEQRENGTFPGPL
BLAST of Carg20529 vs. NCBI nr
Match: XP_022951612.1 (cytochrome c oxidase subunit 6b-1-like [Cucurbita moschata]) HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Carg20529 vs. NCBI nr
Match: XP_023002728.1 (cytochrome c oxidase subunit 6b-1-like [Cucurbita maxima]) HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54 Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of Carg20529 vs. NCBI nr
Match: XP_023537220.1 (cytochrome c oxidase subunit 6b-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Carg20529 vs. NCBI nr
Match: XP_022997269.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 200.7 bits (509), Expect = 4.3e-48 Identity = 143/182 (78.57%), Postives = 149/182 (81.87%), Query Frame = 0
BLAST of Carg20529 vs. NCBI nr
Match: XP_022962484.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 200.3 bits (508), Expect = 5.6e-48 Identity = 153/182 (84.07%), Postives = 159/182 (87.36%), Query Frame = 0
BLAST of Carg20529 vs. TAIR10
Match: AT1G22450.1 (cytochrome C oxidase 6B) HSP 1 Score: 161.8 bits (408), Expect = 4.0e-40 Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of Carg20529 vs. TAIR10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein) HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0
BLAST of Carg20529 vs. TAIR10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein) HSP 1 Score: 144.4 bits (363), Expect = 6.7e-35 Identity = 59/75 (78.67%), Postives = 70/75 (93.33%), Query Frame = 0
BLAST of Carg20529 vs. TAIR10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12 Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q9S7L9|CX6B1_ARATH (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 7.3e-39 Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q9SUD3|CX6B3_ARATH (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 2.4e-34 Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0
BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q945L0|CX6B2_ARATH (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33 Identity = 59/75 (78.67%), Postives = 70/75 (93.33%), Query Frame = 0
BLAST of Carg20529 vs. Swiss-Prot
Match: sp|O94581|COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 9.5e-23 Identity = 48/79 (60.76%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of Carg20529 vs. Swiss-Prot
Match: sp|Q01519|COX12_YEAST (Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX12 PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A0A0LNV6|A0A0A0LNV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.0e-46 Identity = 145/195 (74.36%), Postives = 155/195 (79.49%), Query Frame = 0
BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A1S3BC78|A0A1S3BC78_CUCME (cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.9e-45 Identity = 141/190 (74.21%), Postives = 148/190 (77.89%), Query Frame = 0
BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A1R3K2G3|A0A1R3K2G3_9ROSI (Cytochrome c oxidase, subunit VIb OS=Corchorus olitorius OX=93759 GN=COLO4_12018 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43 Identity = 145/186 (77.96%), Postives = 156/186 (83.87%), Query Frame = 0
BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A1R3JI33|A0A1R3JI33_COCAP (Cytochrome c oxidase, subunit VIb OS=Corchorus capsularis OX=210143 GN=CCACVL1_05975 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42 Identity = 144/186 (77.42%), Postives = 156/186 (83.87%), Query Frame = 0
BLAST of Carg20529 vs. TrEMBL
Match: tr|A0A061FF28|A0A061FF28_THECC (Cytochrome C oxidase polypeptide vib, putative OS=Theobroma cacao OX=3641 GN=TCM_034860 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 8.9e-42 Identity = 148/187 (79.14%), Postives = 160/187 (85.56%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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