Carg20206 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20206
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NEDD4-like E3 ubiquitin-protein ligase
Location	Cucurbita_argyrosperma_scaffold_154 : 223318 .. 224121 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGTTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTTAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGCTCCCTTCCCTGCCTCGCCGCCCGACATGCCCTGCACACAAAACCAACCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTACACTCTGCAACTACAATGAGATGCGAGGCAGGATGTCGTGCGTAAACAACTCGGATATCTTACGCTCTGCACGGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAAACAGCCTTGCGGTTGCCATCGACGATAGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCAATGCCGACGCCGGTGAATGCTGAATATGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

mRNA sequence

ATGAAGGAGTTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTTAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGCTCCCTTCCCTGCCTCGCCGCCCGACATGCCCTGCACACAAAACCAACCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTACACTCTGCAACTACAATGAGATGCGAGGCAGGATGTCGTGCGTAAACAACTCGGATATCTTACGCTCTGCACGGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAAACAGCCTTGCGGTTGCCATCGACGATAGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCAATGCCGACGCCGGTGAATGCTGAATATGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

Coding sequence (CDS)

ATGAAGGAGTTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTTAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGCTCCCTTCCCTGCCTCGCCGCCCGACATGCCCTGCACACAAAACCAACCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTACACTCTGCAACTACAATGAGATGCGAGGCAGGATGTCGTGCGTAAACAACTCGGATATCTTACGCTCTGCACGGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAAACAGCCTTGCGGTTGCCATCGACGATAGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCAATGCCGACGCCGGTGAATGCTGAATATGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

Protein sequence

MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTLEEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLSSCSSNNGRYIVKPIATESAAWKARHFL

Homology

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BLAST of Carg20206 vs. NCBI nr
Match: XP_023530765.1 (uncharacterized protein LOC111793216 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.0 bits (1338), Expect = 4.7e-144
Identity = 263/267 (98.50%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS PDMPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PDMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRT LCNY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

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BLAST of Carg20206 vs. NCBI nr
Match: XP_022931914.1 (uncharacterized protein LOC111438186 [Cucurbita moschata])

HSP 1 Score: 514.6 bits (1324), Expect = 2.0e-142
Identity = 261/267 (97.75%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS PDM CTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PDMSCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMI+QLELEEETARRT LCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMIIQLELEEETARRTKLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAE GAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

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BLAST of Carg20206 vs. NCBI nr
Match: XP_023007284.1 (uncharacterized protein LOC111499822 [Cucurbita maxima])

HSP 1 Score: 513.1 bits (1320), Expect = 5.8e-142
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS P+MPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PNMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRT LCNY+EMRGRMSCVNNSDILRSA+NALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSAQNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAE GAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

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BLAST of Carg20206 vs. NCBI nr
Match: XP_022135499.1 (uncharacterized protein LOC111007440 [Momordica charantia])

HSP 1 Score: 436.4 bits (1121), Expect = 6.9e-119
Identity = 229/267 (85.77%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKG RTFCNGDGSTSTLNQHK NQ  FP S PD+ C +N PTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGIRTFCNGDGSTSTLNQHKANQDHFPIS-PDVRCRKNPPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARR  L NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFR+  +  GRKSVCCEYAL+GRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRN-LDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEA+P PVNA+ G AKLSSILK+ +LR+RA  KRHEKERRF MDY GSDGTITGRLS
Sbjct: 181 LMGLEAIPMPVNAKGGKAKLSSILKRHNLRRRA--KRHEKERRFGMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNG Y+VKPIATESAAWKAR FL
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKARQFL 263

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BLAST of Carg20206 vs. NCBI nr
Match: KGN63550.1 (hypothetical protein Csa_1G004160 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 4.5e-118
Identity = 228/269 (84.76%), Postives = 240/269 (89.22%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQ KTNQ  FP S PD+ C Q  PTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPIS-PDLHCRQTPPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARR  L NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFR--DAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180
           RSSFR  DAAE+ GRKSVCCEY L+GR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVV
Sbjct: 121 RSSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGR 240
           AKLMGLEAMP P+NA    A L+SILK+QSLRKRA  KR EKERRF +DY GSDGTITGR
Sbjct: 181 AKLMGLEAMPMPLNARSSKATLTSILKRQSLRKRA--KRQEKERRFSVDYPGSDGTITGR 240

Query: 241 LSSCSSNNGRYIVKPIATESAAWKARHFL 268
           LSSCSSNNG YIVKPIATESAAW+AR FL
Sbjct: 241 LSSCSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of Carg20206 vs. TrEMBL
Match: tr|A0A0A0LNU8|A0A0A0LNU8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 3.0e-118
Identity = 228/269 (84.76%), Postives = 240/269 (89.22%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQ KTNQ  FP S PD+ C Q  PTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPIS-PDLHCRQTPPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARR  L NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFR--DAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180
           RSSFR  DAAE+ GRKSVCCEY L+GR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVV
Sbjct: 121 RSSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGR 240
           AKLMGLEAMP P+NA    A L+SILK+QSLRKRA  KR EKERRF +DY GSDGTITGR
Sbjct: 181 AKLMGLEAMPMPLNARSSKATLTSILKRQSLRKRA--KRQEKERRFSVDYPGSDGTITGR 240

Query: 241 LSSCSSNNGRYIVKPIATESAAWKARHFL 268
           LSSCSSNNG YIVKPIATESAAW+AR FL
Sbjct: 241 LSSCSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of Carg20206 vs. TrEMBL
Match: tr|A0A2I4FZJ8|A0A2I4FZJ8_9ROSI (uncharacterized protein LOC109003417 OS=Juglans regia OX=51240 GN=LOC109003417 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 168/286 (58.74%), Postives = 200/286 (69.93%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLN-QHKTNQ-------APFPASPPDMP 60
           MK+ SFFL KNSL AKM+KG RTFCN DGSTSTLN Q+KTN         PFP + P   
Sbjct: 1   MKDPSFFLLKNSLGAKMKKGIRTFCNDDGSTSTLNQQNKTNHGDSTSMVTPFPVASPYNS 60

Query: 61  CTQN---QPTLEEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYP 120
              N     TLEEMILQLELEEE AR+  L +   ++GRMSCVNNSDILRSARNALNQYP
Sbjct: 61  HNSNSGQSTTLEEMILQLELEEEVARKAKLNDRTRIQGRMSCVNNSDILRSARNALNQYP 120

Query: 121 RFSLDGKDAMYRSSFRDAA---EKGGRKSVCC-EYALRGRIHENEFNLTLETALRLPSTI 180
           RFSLDGKDAMYRSSFR+ +   EK  RKS+   ++ALRGR  E +F+  LE    LP T+
Sbjct: 121 RFSLDGKDAMYRSSFRNMSGNIEKAERKSISSGDHALRGRFSETDFDSKLERNWTLPQTL 180

Query: 181 AGESVVWRKPGVVAKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFC 240
           AGESVVW +PGVVAKLMGLEAMP P++++ G  KLSSI+KKQ+LR+R   +RHE ERR  
Sbjct: 181 AGESVVWCQPGVVAKLMGLEAMPVPLSSKDGKQKLSSIIKKQNLRRRE--ERHEVERRLA 240

Query: 241 MDYSGSDGTITGRLSSCSSNNGRYIVKPIATE----SAAWKARHFL 268
           MD +  +G   GR++SC S  G  ++KP+A E     A W  R FL
Sbjct: 241 MDINCCNGIKRGRMASC-SRTGYCVMKPVAMEPTSVPAVWPIRRFL 283

[Close]

BLAST of Carg20206 vs. TrEMBL
Match: tr|A0A061FZ26|A0A061FZ26_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014522 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.4e-69
Identity = 161/290 (55.52%), Postives = 195/290 (67.24%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPAS----PPDMPC--- 60
           MK+LS FL KNS+ AKM+KG R FCN DGSTSTLNQH+T+ +   +S    PP +     
Sbjct: 1   MKDLSLFLLKNSVGAKMKKGIRNFCNDDGSTSTLNQHQTDHSATASSDLVTPPSVVASNA 60

Query: 61  --TQNQP--TLEEMILQLELEEETARRTTLCNYNEMR-GRMSCVNNSDILRSARNALNQY 120
             T   P  TLEEMIL+LELEEE AR+  L  Y++ R GRMSC NNSDILRSARNALNQY
Sbjct: 61  NSTARSPPTTLEEMILRLELEEEIARKAKLNEYSDSRAGRMSCANNSDILRSARNALNQY 120

Query: 121 PRFSLDGKDAMYRSSFRDA--AEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIA 180
           PRFSLDGKDAMYRSSFR++     GGRKSVCC++ LR R  +  F   LE +L LPST+ 
Sbjct: 121 PRFSLDGKDAMYRSSFRNSEIVGTGGRKSVCCDHGLRERYCKIGFESRLEKSLCLPSTLG 180

Query: 181 GESVVWRKPGVVAKLMGLEAMPTPVNAEYGAAK-----LSSILKKQSLRKRAGYKRHEKE 240
           GESV+W KPGVVAKLMGLE+MP P++    + K     LSS++K+Q+LR+RA  +RHE E
Sbjct: 181 GESVIWCKPGVVAKLMGLESMPVPISGRSSSCKDGKQQLSSLIKRQNLRRRA--ERHEME 240

Query: 241 RRFCMDYSGSDGTITGRLSSCSSNNGRYIVKPIATESA----AWKARHFL 268
           RR  MD S  D      + SC S  G  ++KP+  E A     W  R FL
Sbjct: 241 RRLAMDMSNYDDFRRASVGSC-SGAGYCVMKPVVVEPANGDGGWPTRRFL 287

[Close]

BLAST of Carg20206 vs. TrEMBL
Match: tr|A0A1R3G1X0|A0A1R3G1X0_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_37432 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 159/303 (52.48%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQH-----------------KTNQAP 60
           MK+LSFFL KNS+ AKM+KG R FCNGDGSTSTLNQH                  +N   
Sbjct: 1   MKDLSFFLLKNSIGAKMKKGIRNFCNGDGSTSTLNQHXXXXXXXXXXXXXXXXXXSNANS 60

Query: 61  FPASPPDMPCTQNQPTLEEMILQLELEEETARRTTLCNYNEMR-GRMSCVNNSDILRSAR 120
              SPP         TLEEMIL+LELEEE AR+  L  +N +R GRMSCVNNSDILRSAR
Sbjct: 61  MTQSPP--------TTLEEMILRLELEEELARKAKLNEFNGIRAGRMSCVNNSDILRSAR 120

Query: 121 NALNQYPRFSLDGKDAMYRSSFRDA-AEKGGRKSVCCEYALRGRIHENEFNLTLETALRL 180
           NALNQYPRFSLDGKDAMYRSSFR++    GGRKSVCC++ +R R  + EF      ++ L
Sbjct: 121 NALNQYPRFSLDGKDAMYRSSFRNSEIINGGRKSVCCDHGVRERYCKIEFESRFGKSICL 180

Query: 181 PSTIAGESVVWRKPGVVAKLMGLEAMPTPVNA-------EYGAAKLSSILKKQSLRKRAG 240
           PST+ GESV+W KPGVVAKLMGLE++P PV++       E    KLSS++K+Q+LR+RA 
Sbjct: 181 PSTVGGESVIWCKPGVVAKLMGLESVPVPVSSXXXSKHGENRKQKLSSLIKRQNLRRRA- 240

Query: 241 YKRHEKERRFCMDYSGSDGTITGRLSSCS-----SNNGRYIVKPIATESA-----AWKAR 268
            +RHE ERR  M+ S +   +  R SS       S  G  ++KP+  E A      W  R
Sbjct: 241 -ERHEIERRLAMEMSNNYEDLRLRRSSAEKMGSYSKPGYCVMKPVVVEPAQHGDGGWPTR 293

[Close]

BLAST of Carg20206 vs. TrEMBL
Match: tr|A0A067KFM8|A0A067KFM8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16204 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.5e-64
Identity = 161/285 (56.49%), Postives = 186/285 (65.26%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTN-------QAPFPASPPDMPC 60
           MK+LSFFL KNS+ AKMRKG R FCNGDGSTSTLNQHK N       +A F  S P    
Sbjct: 1   MKDLSFFLIKNSVGAKMRKGIRNFCNGDGSTSTLNQHKPNHVDDGGDRACFINSTPCFNS 60

Query: 61  TQNQPTLEEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSL 120
               PTLEEMILQLE+EEE A RT   N+     RMSCVNNSDILRSARNALNQYPRFSL
Sbjct: 61  NATPPTLEEMILQLEVEEEIA-RTAKLNHEMRSRRMSCVNNSDILRSARNALNQYPRFSL 120

Query: 121 DGKDAMYRSSFRDAAEK----GGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGES 180
           DGKDAMYRSSFR+         GRKS+CCE   RG +   +   +L +  +  ST+AGES
Sbjct: 121 DGKDAMYRSSFRNLDHHQQVIAGRKSICCE---RGLLRNEK---SLSSHNKSCSTLAGES 180

Query: 181 VVWRKPGVVAKLMGLEAMPTPVNAEYGAAK--LSSILKKQSLRKRAGYKRHEKERRFCMD 240
           VVW KPGV+AKLMGLEAMP PVN E    K  L+SILK+Q+LR+R   +RHE ERR    
Sbjct: 181 VVWCKPGVIAKLMGLEAMPVPVNRERNNNKETLNSILKRQNLRRRV--ERHEMERRLASG 240

Query: 241 YSGSDGTITGR-LSSCS-SNNGRYIVKPIA----TESAAWKARHF 267
           +        GR + SCS ++NG  ++KPIA     E   W  R F
Sbjct: 241 HHRQVMNNRGRVMGSCSRTSNGYCVMKPIAVEKPNEEGGWPTRRF 276

The following BLAST results are available for this feature:

BLAST of Carg20206 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530765.1	4.7e-144	98.50	uncharacterized protein LOC111793216 [Cucurbita pepo subsp. pepo]	[more]
XP_022931914.1	2.0e-142	97.75	uncharacterized protein LOC111438186 [Cucurbita moschata]	[more]
XP_023007284.1	5.8e-142	97.38	uncharacterized protein LOC111499822 [Cucurbita maxima]	[more]
XP_022135499.1	6.9e-119	85.77	uncharacterized protein LOC111007440 [Momordica charantia]	[more]
KGN63550.1	4.5e-118	84.76	hypothetical protein Csa_1G004160 [Cucumis sativus]	[more]

BLAST of Carg20206 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg20206 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20206 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNU8\|A0A0A0LNU8_CUCSA	3.0e-118	84.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=4 SV=1	[more]
tr\|A0A2I4FZJ8\|A0A2I4FZJ8_9ROSI	1.9e-72	58.74	uncharacterized protein LOC109003417 OS=Juglans regia OX=51240 GN=LOC109003417 P...	[more]
tr\|A0A061FZ26\|A0A061FZ26_THECC	7.4e-69	55.52	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014522 PE=4 SV=1	[more]
tr\|A0A1R3G1X0\|A0A1R3G1X0_9ROSI	2.2e-65	52.48	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_37432 PE=4 SV=1	[more]
tr\|A0A067KFM8\|A0A067KFM8_JATCU	5.5e-64	56.49	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16204 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032795	DUF3741-assoc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20206-RA	Carg20206-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032795	DUF3741-associated sequence motif	PFAM	PF14383	VARLMGL	coord: 167..189 e-value: 2.1E-7 score: 30.2
None	No IPR available	PANTHER	PTHR37897	FAMILY NOT NAMED	coord: 17..261

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20206	Cla019221	Watermelon (97103) v1	carwmB1047
Carg20206	Csa1G004160	Cucumber (Chinese Long) v2	carcuB1062
Carg20206	MELO3C026268	Melon (DHL92) v3.5.1	carmeB1015
Carg20206	ClCG06G017280	Watermelon (Charleston Gray)	carwcgB1019
Carg20206	CSPI01G01110	Wild cucumber (PI 183967)	carcpiB1083
Carg20206	Cucsa.196580	Cucumber (Gy14) v1	carcgyB1162
Carg20206	CmaCh11G000760	Cucurbita maxima (Rimu)	carcmaB1449
Carg20206	CmaCh10G001030	Cucurbita maxima (Rimu)	carcmaB1448
Carg20206	CmoCh10G001070	Cucurbita moschata (Rifu)	carcmoB1402
Carg20206	Lsi06G015830	Bottle gourd (USVL1VR-Ls)	carlsiB955
Carg20206	Cp4.1LG18g08570	Cucurbita pepo (Zucchini)	carcpeB1456
Carg20206	Cp4.1LG04g15670	Cucurbita pepo (Zucchini)	carcpeB1458
Carg20206	CsGy1G001150	Cucumber (Gy14) v2	carcgybB1031
Carg20206	MELO3C026268.2	Melon (DHL92) v3.6.1	carmedB1027
Carg20206	CsaV3_1G001220	Cucumber (Chinese Long) v3	carcucB1095
Carg20206	Cla97C06G126960	Watermelon (97103) v2	carwmbB1105

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20206	Carg10324	Silver-seed gourd	carcarB396

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20206	Silver-seed gourd	carcarB399
Carg20206	Silver-seed gourd	carcarB446
Carg20206	Silver-seed gourd	carcarB484
Carg20206	Cucurbita maxima (Rimu)	carcmaB1450
Carg20206	Cucurbita moschata (Rifu)	carcmoB1403
Carg20206	Cucurbita moschata (Rifu)	carcmoB1404
Carg20206	Cucurbita pepo (Zucchini)	carcpeB1457
Carg20206	Wax gourd	carwgoB1227