CSPI01G01110 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGGCATGTGAATGGCATTAATTAACACTATACTCACTTTGAATCGAAGACCACACCGCTCTCATTCATTCAATTCACAGTTTTTTGGCAAATTTGTGTTTAGAATTCATCTTCAAAACAAAGAAAAATGGTAAAATTATTAGAAAAGTCAGATTCTACCTCCAAGTTTTGATCCTGCAGCGCCCTTCTTCATGCATTCAAAATGAAAGAGTTATCCTTCTTTCTCTTCAAGAATTCTCTGGCAGCAAAGATGAGGAAAGGCTTCAGAACTTTCTGCAATGGCGACGGTTCAACCTCCACTCTCAATCAACAGAAAACCAACCAGGATCAGTTCCCCATTTCGCCTGATCTGCACTGCAGACAAACCCCGCCAACCTTGGAGGAGATGATTTTGCAGTTGGAATTAGAGGAGGAGACAGCAAGAAGAGCAAAACTCTACAACTACGATGAGATGCGGGGCAGGATGTCATGTGTAAACAACTCGGATATCCTGCGATCTGCACGAAATGCTTTGAATCAGTATCCTCGGTTTTCTCTTGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGAACTTGGATGCTGCTGAAAGGGTTGGGAGGAAATCAGTTTGCTGCGAGTATGGTCTCAAAGGGAGAGTTCATGATAATGAGTTCAATTTGACACTGGAGACAGCCTTACGATTGCCATCAACGATAGCTGGGGAGAATGTTGTGTGGCGCAAACCAGGAGTGGTAGCCAAGTTGATGGGTCTTGAGGCAATGCCGATGCCGTTGAATGCTAGAAGTAGCAAAGCAACATTGACCTCCATATTGAAGAGACAGAGTCTAAGGAAGAGAGCTAAGAGGCAAGAAAAAGAGAGAAGATTTTCCGTGGACTATCCTGGTTCTGATGGCACTATAACAGGAAGGTTAAGTTCTTGCAGTTCAAACAATGGGTGCTATATCGTGAAGCCAATTGCAACAGAATCAGCAGCATGGAGAGCCAGGGAATTTCTTTAGATTTCATTTCCCACTGGTGCAACATAATGTCCCAGAAATCAACAAAAACGAACTCCATAATTTAGCCATTACGTTGAGGTGGGATCCTGCACTAGCCACATAGCAAGTGGTTTTTGAGGCACTCAAAAATCTGTCGACAAACAAGAGAACAGTGTTTTGTTAATCTTTGAATATATAAAAATAACAAACCAAATTTCTGAT ATGAAAGAGTTATCCTTCTTTCTCTTCAAGAATTCTCTGGCAGCAAAGATGAGGAAAGGCTTCAGAACTTTCTGCAATGGCGACGGTTCAACCTCCACTCTCAATCAACAGAAAACCAACCAGGATCAGTTCCCCATTTCGCCTGATCTGCACTGCAGACAAACCCCGCCAACCTTGGAGGAGATGATTTTGCAGTTGGAATTAGAGGAGGAGACAGCAAGAAGAGCAAAACTCTACAACTACGATGAGATGCGGGGCAGGATGTCATGTGTAAACAACTCGGATATCCTGCGATCTGCACGAAATGCTTTGAATCAGTATCCTCGGTTTTCTCTTGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGAACTTGGATGCTGCTGAAAGGGTTGGGAGGAAATCAGTTTGCTGCGAGTATGGTCTCAAAGGGAGAGTTCATGATAATGAGTTCAATTTGACACTGGAGACAGCCTTACGATTGCCATCAACGATAGCTGGGGAGAATGTTGTGTGGCGCAAACCAGGAGTGGTAGCCAAGTTGATGGGTCTTGAGGCAATGCCGATGCCGTTGAATGCTAGAAGTAGCAAAGCAACATTGACCTCCATATTGAAGAGACAGAGTCTAAGGAAGAGAGCTAAGAGGCAAGAAAAAGAGAGAAGATTTTCCGTGGACTATCCTGGTTCTGATGGCACTATAACAGGAAGGTTAAGTTCTTGCAGTTCAAACAATGGGTGCTATATCGTGAAGCCAATTGCAACAGAATCAGCAGCATGGAGAGCCAGGGAATTTCTTTAG ATGAAAGAGTTATCCTTCTTTCTCTTCAAGAATTCTCTGGCAGCAAAGATGAGGAAAGGCTTCAGAACTTTCTGCAATGGCGACGGTTCAACCTCCACTCTCAATCAACAGAAAACCAACCAGGATCAGTTCCCCATTTCGCCTGATCTGCACTGCAGACAAACCCCGCCAACCTTGGAGGAGATGATTTTGCAGTTGGAATTAGAGGAGGAGACAGCAAGAAGAGCAAAACTCTACAACTACGATGAGATGCGGGGCAGGATGTCATGTGTAAACAACTCGGATATCCTGCGATCTGCACGAAATGCTTTGAATCAGTATCCTCGGTTTTCTCTTGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGAACTTGGATGCTGCTGAAAGGGTTGGGAGGAAATCAGTTTGCTGCGAGTATGGTCTCAAAGGGAGAGTTCATGATAATGAGTTCAATTTGACACTGGAGACAGCCTTACGATTGCCATCAACGATAGCTGGGGAGAATGTTGTGTGGCGCAAACCAGGAGTGGTAGCCAAGTTGATGGGTCTTGAGGCAATGCCGATGCCGTTGAATGCTAGAAGTAGCAAAGCAACATTGACCTCCATATTGAAGAGACAGAGTCTAAGGAAGAGAGCTAAGAGGCAAGAAAAAGAGAGAAGATTTTCCGTGGACTATCCTGGTTCTGATGGCACTATAACAGGAAGGTTAAGTTCTTGCAGTTCAAACAATGGGTGCTATATCGTGAAGCCAATTGCAACAGAATCAGCAGCATGGAGAGCCAGGGAATTTCTTTAG
BLAST of CSPI01G01110 vs. TrEMBL
Match: A0A0A0LNU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004160 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 3.7e-147 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1
BLAST of CSPI01G01110 vs. TrEMBL
Match: A0A061FZ26_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014522 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 3.9e-72 Identity = 161/289 (55.71%), Postives = 193/289 (66.78%), Query Frame = 1
BLAST of CSPI01G01110 vs. TrEMBL
Match: A0A067KFM8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16204 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 8.1e-70 Identity = 165/283 (58.30%), Postives = 195/283 (68.90%), Query Frame = 1
BLAST of CSPI01G01110 vs. TrEMBL
Match: B9GLA9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03820g PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 8.9e-69 Identity = 155/261 (59.39%), Postives = 182/261 (69.73%), Query Frame = 1
BLAST of CSPI01G01110 vs. TrEMBL
Match: A0A0S3QZI7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G122000 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.6e-62 Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 1
BLAST of CSPI01G01110 vs. NCBI nr
Match: gi|700208454|gb|KGN63550.1| (hypothetical protein Csa_1G004160 [Cucumis sativus]) HSP 1 Score: 528.9 bits (1361), Expect = 5.3e-147 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1
BLAST of CSPI01G01110 vs. NCBI nr
Match: gi|590669552|ref|XP_007037807.1| (Uncharacterized protein TCM_014522 [Theobroma cacao]) HSP 1 Score: 279.6 bits (714), Expect = 5.6e-72 Identity = 161/289 (55.71%), Postives = 193/289 (66.78%), Query Frame = 1
BLAST of CSPI01G01110 vs. NCBI nr
Match: gi|802659430|ref|XP_012080839.1| (PREDICTED: uncharacterized protein LOC105641007 [Jatropha curcas]) HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69 Identity = 165/283 (58.30%), Postives = 195/283 (68.90%), Query Frame = 1
BLAST of CSPI01G01110 vs. NCBI nr
Match: gi|224052847|ref|XP_002297610.1| (hypothetical protein POPTR_0001s03820g [Populus trichocarpa]) HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68 Identity = 155/261 (59.39%), Postives = 182/261 (69.73%), Query Frame = 1
BLAST of CSPI01G01110 vs. NCBI nr
Match: gi|965657287|dbj|BAT73706.1| (hypothetical protein VIGAN_01122000 [Vigna angularis var. angularis]) HSP 1 Score: 247.7 bits (631), Expect = 2.3e-62 Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |