Carg20116 (gene) Silver-seed gourd

Overview
NameCarg20116
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein SRC2
LocationCucurbita_argyrosperma_scaffold_168 : 218556 .. 219569 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGATCCATGGAGATCAAGGTCGTCTCCGCCGGAGACCTCAACAACGTCAATCTCCTCACCAAAATGGACGTCTACGCCGTCGTCAAGCTCCTCACCGCCGACGCCTCCGGCAAGTTCATCCCCAAATCCGCCCAGAAATTCAAAACTCCCGTTGACAAAGAAGGCGGCAGCCACCCGATATGGAATTTCTCTGTGAAATTCGCGATCGATGAGGCCGCCGCTAGGGCAAACCGTCTCACCCTAGTTTTCAAGCTTCGATGTCAACGGAATCTCGGCGATAGAGATATCGGCGAGGTCTACGTTCCGGTGAAGGAGCTTCTAGATTCCACCGGTGACGGCAAAGGCGATTCGATGCAACATCTTAGTTATCAGGTGAGGAAACCGTCTGGAAATCCCCAGGGGGTCTTGAATTTCGCTTTTAAATTTGGGGATAATCTGTCCTTTGGTCCAATTAAACCGGATTCTGTTCAAACATCCAACCTGGTTTCCGCCGCCTACCCACCAGAGTCGAGTTCGCTCGCCGTCGCTCACGGTGGGGCTCATCCTCTACCGCCGACGCCTCCTCCTCAACCGGAACCTTATCGTCCGCCCTCAAATTTGTACCCGGTCCTTCCGCCGCAGGAGGCGTTGCCGCAGATTGGATATAGTGCATACCCACAACCGCCGGCGACAGGATACAGAACATACTCGCCGGCAACATCGTACGACTTATACGTGCAGGCACCAACCTACAGCGTGTACGCGCCGGCGCCGTTTCAACAACCAGTGTATGCATACAATCAACCACCGCCGCCACCGGCCGCATATGGATACCAACCGCCGCCAACGTTCGGATATCCGGCAGCCCCGTCATATTATCCACCGCCGCCGACGAACAAGAATAACAACAGGGGATTAGGATTAGGAGCTGGATTGGTCGGAGGGATGTTGGGAGGGATTTTGATCGGAGATATGGTGTCGGACGCCGCCGACGGCGGATTCGGTGATTCCGGTGGATTTGACTTTTGA

mRNA sequence

ATGGAAAGATCCATGGAGATCAAGGTCGTCTCCGCCGGAGACCTCAACAACGTCAATCTCCTCACCAAAATGGACGTCTACGCCGTCGTCAAGCTCCTCACCGCCGACGCCTCCGGCAAGTTCATCCCCAAATCCGCCCAGAAATTCAAAACTCCCGTTGACAAAGAAGGCGGCAGCCACCCGATATGGAATTTCTCTGTGAAATTCGCGATCGATGAGGCCGCCGCTAGGGCAAACCGTCTCACCCTAGTTTTCAAGCTTCGATGTCAACGGAATCTCGGCGATAGAGATATCGGCGAGGTCTACGTTCCGGTGAAGGAGCTTCTAGATTCCACCGGTGACGGCAAAGGCGATTCGATGCAACATCTTAGTTATCAGGTGAGGAAACCGTCTGGAAATCCCCAGGGGGTCTTGAATTTCGCTTTTAAATTTGGGGATAATCTGTCCTTTGGTCCAATTAAACCGGATTCTGTTCAAACATCCAACCTGGTTTCCGCCGCCTACCCACCAGAGTCGAGTTCGCTCGCCGTCGCTCACGGTGGGGCTCATCCTCTACCGCCGACGCCTCCTCCTCAACCGGAACCTTATCGTCCGCCCTCAAATTTGTACCCGGTCCTTCCGCCGCAGGAGGCGTTGCCGCAGATTGGATATAGTGCATACCCACAACCGCCGGCGACAGGATACAGAACATACTCGCCGGCAACATCGTACGACTTATACGTGCAGGCACCAACCTACAGCGTGTACGCGCCGGCGCCGTTTCAACAACCAGTGTATGCATACAATCAACCACCGCCGCCACCGGCCGCATATGGATACCAACCGCCGCCAACGTTCGGATATCCGGCAGCCCCGTCATATTATCCACCGCCGCCGACGAACAAGAATAACAACAGGGGATTAGGATTAGGAGCTGGATTGGTCGGAGGGATGTTGGGAGGGATTTTGATCGGAGATATGGTGTCGGACGCCGCCGACGGCGGATTCGGTGATTCCGGTGGATTTGACTTTTGA

Coding sequence (CDS)

ATGGAAAGATCCATGGAGATCAAGGTCGTCTCCGCCGGAGACCTCAACAACGTCAATCTCCTCACCAAAATGGACGTCTACGCCGTCGTCAAGCTCCTCACCGCCGACGCCTCCGGCAAGTTCATCCCCAAATCCGCCCAGAAATTCAAAACTCCCGTTGACAAAGAAGGCGGCAGCCACCCGATATGGAATTTCTCTGTGAAATTCGCGATCGATGAGGCCGCCGCTAGGGCAAACCGTCTCACCCTAGTTTTCAAGCTTCGATGTCAACGGAATCTCGGCGATAGAGATATCGGCGAGGTCTACGTTCCGGTGAAGGAGCTTCTAGATTCCACCGGTGACGGCAAAGGCGATTCGATGCAACATCTTAGTTATCAGGTGAGGAAACCGTCTGGAAATCCCCAGGGGGTCTTGAATTTCGCTTTTAAATTTGGGGATAATCTGTCCTTTGGTCCAATTAAACCGGATTCTGTTCAAACATCCAACCTGGTTTCCGCCGCCTACCCACCAGAGTCGAGTTCGCTCGCCGTCGCTCACGGTGGGGCTCATCCTCTACCGCCGACGCCTCCTCCTCAACCGGAACCTTATCGTCCGCCCTCAAATTTGTACCCGGTCCTTCCGCCGCAGGAGGCGTTGCCGCAGATTGGATATAGTGCATACCCACAACCGCCGGCGACAGGATACAGAACATACTCGCCGGCAACATCGTACGACTTATACGTGCAGGCACCAACCTACAGCGTGTACGCGCCGGCGCCGTTTCAACAACCAGTGTATGCATACAATCAACCACCGCCGCCACCGGCCGCATATGGATACCAACCGCCGCCAACGTTCGGATATCCGGCAGCCCCGTCATATTATCCACCGCCGCCGACGAACAAGAATAACAACAGGGGATTAGGATTAGGAGCTGGATTGGTCGGAGGGATGTTGGGAGGGATTTTGATCGGAGATATGGTGTCGGACGCCGCCGACGGCGGATTCGGTGATTCCGGTGGATTTGACTTTTGA

Protein sequence

MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSMQHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHGGAHPLPPTPPPQPEPYRPPSNLYPVLPPQEALPQIGYSAYPQPPATGYRTYSPATSYDLYVQAPTYSVYAPAPFQQPVYAYNQPPPPPAAYGYQPPPTFGYPAAPSYYPPPPTNKNNNRGLGLGAGLVGGMLGGILIGDMVSDAADGGFGDSGGFDF
Homology
[Close]
BLAST of Carg20116 vs. NCBI nr
Match: XP_022956293.1 (protein SRC2-like [Cucurbita moschata])

HSP 1 Score: 381.7 bits (979), Expect = 2.5e-102
Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH
Sbjct: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM
Sbjct: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHG 180
           QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSN VSAAYPPESSSLAVAHG
Sbjct: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNPVSAAYPPESSSLAVAHG 180

Query: 181 GAHPLPPTPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           GAHPLPPTPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GAHPLPPTPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXQQPVYAYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 300
           XXXXXXXXXXXXXXQQPVYAYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
Sbjct: 241 XXXXXXXXXXXXXXQQPVYAYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 300

Query: 301 LGXXXXXXXXXXXXXXXXXXXXXXXDGGFGDSGGFDF 338
           LGXXXXXXXXXXXXXXXXXXXXXXXDGGFGDSGGFDF
Sbjct: 301 LGXXXXXXXXXXXXXXXXXXXXXXXDGGFGDSGGFDF 337

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BLAST of Carg20116 vs. NCBI nr
Match: XP_023527775.1 (protein SRC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 4.1e-100
Identity = 333/337 (98.81%), Postives = 333/337 (98.81%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH
Sbjct: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM
Sbjct: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHG 180
           QHLSYQVRKPSGNPQGVLNFAFKFGDNLS GPIKPD VQTSN VSAAYPPESSSLA AHG
Sbjct: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSSGPIKPDYVQTSNPVSAAYPPESSSLAFAHG 180

Query: 181 GAHPLPPTPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           GAHPLPPTPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GAHPLPPTPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXQQPVYAYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 300
           XXXXXXXXXXXXXXQQPVYAYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
Sbjct: 241 XXXXXXXXXXXXXXQQPVYAYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 300

Query: 301 LGXXXXXXXXXXXXXXXXXXXXXXXDGGFGDSGGFDF 338
           LGXXXXXXXXXXXXXXXXXXXXXXXDGGFGDSGGFDF
Sbjct: 301 LGXXXXXXXXXXXXXXXXXXXXXXXDGGFGDSGGFDF 337

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BLAST of Carg20116 vs. NCBI nr
Match: XP_022979860.1 (protein SRC2-like [Cucurbita maxima])

HSP 1 Score: 364.4 bits (934), Expect = 4.2e-97
Identity = 183/191 (95.81%), Postives = 184/191 (96.34%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLT DASGKFIPKSAQKFKTPVDKEG SH
Sbjct: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTTDASGKFIPKSAQKFKTPVDKEGRSH 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDS GDGKGDSM
Sbjct: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSAGDGKGDSM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHG 180
           QHLSYQVRKPSGNPQGVLNFAFKF DNL  GPIKPDSVQTSN VSAAYPPESSS+AVAHG
Sbjct: 121 QHLSYQVRKPSGNPQGVLNFAFKFEDNLPSGPIKPDSVQTSNPVSAAYPPESSSVAVAHG 180

Query: 181 GAHPLPPTPPP 192
           GAHPLPPTPPP
Sbjct: 181 GAHPLPPTPPP 191

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BLAST of Carg20116 vs. NCBI nr
Match: XP_004134204.1 (PREDICTED: cyclin-K [Cucumis sativus] >KGN57099.1 hypothetical protein Csa_3G153730 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 3.2e-73
Identity = 141/183 (77.05%), Postives = 156/183 (85.25%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIKVVSA DLNNVNLL KMDVY +VKLL  D SGK  PKSAQKF TPVDKEGGS+
Sbjct: 1   MERSMEIKVVSARDLNNVNLLMKMDVYVLVKLLVTDISGKSKPKSAQKFMTPVDKEGGSN 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFSVKF++DEAA RAN LTLVFKLRCQRNLGDRDIGEVYVPVKELLDS G+GKGD M
Sbjct: 61  PIWNFSVKFSVDEAAVRANCLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSAGEGKGDLM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHG 180
           QHLSYQVRKPSG+PQGVLNFAF+FG+N + GP+KPD + + N V    P E S +AV+HG
Sbjct: 121 QHLSYQVRKPSGSPQGVLNFAFRFGENSNSGPVKPDQIHSHNPVPTYPPLEPSPVAVSHG 180

Query: 181 GAH 184
           G +
Sbjct: 181 GGY 183

[Close]
BLAST of Carg20116 vs. NCBI nr
Match: XP_022947962.1 (protein SRC2-like [Cucurbita moschata])

HSP 1 Score: 280.0 bits (715), Expect = 1.0e-71
Identity = 148/190 (77.89%), Postives = 160/190 (84.21%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIKVVSA DLNNVN L KMDVY VVKL+T D +     KS+Q+FKTPVDKEGGS+
Sbjct: 1   MERSMEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKS---KSSQRFKTPVDKEGGSN 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFS+KFAIDEAAARANRLTL FKL CQRNLGDRDIG+VYVPVKELLDS GDGKGDSM
Sbjct: 61  PIWNFSIKFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDSM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHG 180
           QHLSYQVRKPSGNPQGVLNF+FKF DN   GP++P  VQT + VSA    +SSS AVAHG
Sbjct: 121 QHLSYQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSA----DSSSFAVAHG 180

Query: 181 GAHPLPPTPP 191
           GA P PP PP
Sbjct: 181 GAFP-PPLPP 182

[Close]
BLAST of Carg20116 vs. TAIR10
Match: AT3G16510.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 138.3 bits (347), Expect = 8.9e-33
Identity = 81/160 (50.62%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 4   SMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPIW 63
           ++E+ V SA DL NVNL+TKMDVYAVV  +T D S K       K KTP+D+ G S P W
Sbjct: 5   TLELNVYSAKDLENVNLITKMDVYAVV-WITGDDSRK-----NHKEKTPIDRTGESEPTW 64

Query: 64  NFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELL------DSTGDGKG 123
           N +VKF++D+  A   RLTLV KL C R  GD+D+GEV VPV ELL       S GDG+G
Sbjct: 65  NHTVKFSVDQRLAHEGRLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQG 124

Query: 124 DSMQHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDS 158
             M+ ++YQVR P G  QG L F+++F D+ +F P +P S
Sbjct: 125 -MMRFVTYQVRTPFGKGQGSLTFSYRF-DSPTFKPDQPVS 156

[Close]
BLAST of Carg20116 vs. TAIR10
Match: AT1G09070.1 (soybean gene regulated by cold-2)

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-28
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 0 

Query: 3   RSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPI 62
           RS+++ ++SA DL +V L+ K D+YAVV  +  DA          K KT VDK+ G+ P 
Sbjct: 4   RSLDLTIISAEDLKDVQLIGKQDLYAVVS-INGDA--------RTKQKTKVDKDCGTKPK 63

Query: 63  WNFSVKFAIDEAAARANRLTLVFKLRCQRNL-GDRDIGEVYVPVKELLDSTGDGKGDSMQ 122
           W   +K  +D+AAAR NRLTLVF++   R + GD+ +GEV VPVKELLD     KGD  +
Sbjct: 64  WKHQMKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLD---QNKGDEEK 123

Query: 123 HLSYQVRKPSGNPQGVLNFAFKFGDNLSFG-------PIKPDSV--QTSNLVSAAYPP 171
            ++Y VR P+G  +G L F+FKFG+  ++G       P+ P ++  +T +    AYPP
Sbjct: 124 TVTYAVRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPV-PSAMDHKTMDQPVTAYPP 168

[Close]
BLAST of Carg20116 vs. TAIR10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-25
Identity = 60/150 (40.00%), Postives = 96/150 (64.00%), Query Frame = 0 

Query: 4   SMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPIW 63
           ++E+ + SA +L NVNL+TKM+V+  + +   +   K      QK KT VD+ GGS+P W
Sbjct: 5   TLELNINSARNLLNVNLITKMNVFTAITINGENTRKK------QKAKTTVDRYGGSNPTW 64

Query: 64  NFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDST-----GDGKGD 123
           N ++KF++DE +AR    +LV ++  +R LG+++IG V +P+ ELL++T     GDG   
Sbjct: 65  NQTIKFSVDERSARGGHSSLVMRVISRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDH 124

Query: 124 SMQHLSYQVRKPSGNPQGVLNFAFKFGDNL 149
            M+ +SYQVR  SG   G L+F+++F  N+
Sbjct: 125 EMKLMSYQVRTSSGKRSGSLSFSYRFKPNV 148

[Close]
BLAST of Carg20116 vs. TAIR10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-17
Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = 0 

Query: 4   SMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPIW 63
           ++E+K+VSA D+N+++   KMDVYAVV  +  D +     +  Q  KTP+D +GGS+P W
Sbjct: 40  TLELKIVSASDVNHIDATDKMDVYAVVS-INGDTT-----QQKQAAKTPIDYDGGSNPTW 99

Query: 64  NFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRD--IGEVYVPVKELLDST-----GDGK 123
           N +VKF+++E  A    LT+  KL      GD D  +GEV V V++LL S       +G 
Sbjct: 100 NHTVKFSVNEREANEGLLTITVKLFSYWLEGDNDLYLGEVNVSVQDLLASNPIPPFTNGN 159

Query: 124 GDSMQHLSYQVR--KPSGNPQGVLNFAFKFGDNLSFGPIKPDSV 159
            + M+ ++  ++  + S N    L++ FK      F P  PDS+
Sbjct: 160 INKMKSMTCPIKATEKSTNTTVSLSYRFKPVPVEEFYPPSPDSL 197

[Close]
BLAST of Carg20116 vs. TAIR10
Match: AT3G62780.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17
Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 3   RSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPI 62
           RS+EI V SA  L  V   +KMDV+  VKL     SG       ++ +T   ++GG+ P 
Sbjct: 4   RSLEINVTSAKGLKKV---SKMDVFVAVKL-----SGDPKCSDHREQRTQAARDGGTSPK 63

Query: 63  W-NFSVKFAIDEAAARANRLTLVFKLRCQRNLG-DRDIGEVYVPVKELLDSTGDGKGDSM 122
           W N  +KF +D+  A ANRL + FK++C++  G D+DIGEV+V VKELLD  G+ K    
Sbjct: 64  WSNDVMKFILDQNLAEANRLVITFKIKCEQRGGVDKDIGEVHVQVKELLDHLGNDK-TGQ 123

Query: 123 QHLSYQVRKPSGNPQGVLNFAFKF 145
           ++++YQ+    G  +  ++F + F
Sbjct: 124 RYVTYQI----GKSKADISFTYSF 134

[Close]
BLAST of Carg20116 vs. Swiss-Prot
Match: sp|O04133|SRC2_SOYBN (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 81/187 (43.32%), Postives = 115/187 (61.50%), Query Frame = 0 

Query: 3   RSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPI 62
           R++E+ ++SA D+ NVNL +KMDVYA V L     SG   P   Q   T V K+ GS+P 
Sbjct: 6   RTLELNIISAKDIKNVNLFSKMDVYAAVSL-----SGD--PLHPQGATTHVHKDAGSNPT 65

Query: 63  WNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSMQH 122
           WN+ VKF+++E+ A+ NRL+L  KL   R LGD  IG V+VP++ELLD+ GD    S + 
Sbjct: 66  WNYPVKFSVNESLAKENRLSLEIKLISDRTLGDTVIGTVHVPLRELLDNPGD--DSSFRQ 125

Query: 123 LSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIK-PDSVQTSNLVSAAYPPE-SSSLAVAHG 182
           +SYQV K S   +G LNF++KFG+++     K P + +       AYPP  + S ++ +G
Sbjct: 126 VSYQVMKQSRKSKGSLNFSYKFGEHVPAPAAKTPKAAKAGQEPVMAYPPAGAGSSSMPYG 183

Query: 183 GAHPLPP 188
             HP PP
Sbjct: 186 TPHPPPP 183

[Close]
BLAST of Carg20116 vs. Swiss-Prot
Match: sp|O04023|SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.1e-27
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 0 

Query: 3   RSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPI 62
           RS+++ ++SA DL +V L+ K D+YAVV  +  DA          K KT VDK+ G+ P 
Sbjct: 4   RSLDLTIISAEDLKDVQLIGKQDLYAVVS-INGDA--------RTKQKTKVDKDCGTKPK 63

Query: 63  WNFSVKFAIDEAAARANRLTLVFKLRCQRNL-GDRDIGEVYVPVKELLDSTGDGKGDSMQ 122
           W   +K  +D+AAAR NRLTLVF++   R + GD+ +GEV VPVKELLD     KGD  +
Sbjct: 64  WKHQMKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLD---QNKGDEEK 123

Query: 123 HLSYQVRKPSGNPQGVLNFAFKFGDNLSFG-------PIKPDSV--QTSNLVSAAYPP 171
            ++Y VR P+G  +G L F+FKFG+  ++G       P+ P ++  +T +    AYPP
Sbjct: 124 TVTYAVRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPV-PSAMDHKTMDQPVTAYPP 168

[Close]
BLAST of Carg20116 vs. TrEMBL
Match: tr|A0A0A0L7V9|A0A0A0L7V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153730 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 141/183 (77.05%), Postives = 156/183 (85.25%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIKVVSA DLNNVNLL KMDVY +VKLL  D SGK  PKSAQKF TPVDKEGGS+
Sbjct: 1   MERSMEIKVVSARDLNNVNLLMKMDVYVLVKLLVTDISGKSKPKSAQKFMTPVDKEGGSN 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFSVKF++DEAA RAN LTLVFKLRCQRNLGDRDIGEVYVPVKELLDS G+GKGD M
Sbjct: 61  PIWNFSVKFSVDEAAVRANCLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSAGEGKGDLM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLVSAAYPPESSSLAVAHG 180
           QHLSYQVRKPSG+PQGVLNFAF+FG+N + GP+KPD + + N V    P E S +AV+HG
Sbjct: 121 QHLSYQVRKPSGSPQGVLNFAFRFGENSNSGPVKPDQIHSHNPVPTYPPLEPSPVAVSHG 180

Query: 181 GAH 184
           G +
Sbjct: 181 GGY 183

[Close]
BLAST of Carg20116 vs. TrEMBL
Match: tr|A0A1S3AX20|A0A1S3AX20_CUCME (protein SRC2 OS=Cucumis melo OX=3656 GN=LOC103483836 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 136/164 (82.93%), Postives = 143/164 (87.20%), Query Frame = 0 

Query: 1   MERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSH 60
           MERSMEIK+VSA DL NVNLL KMDVY VVKLL  DASGK  PKSAQKF TPVDKEGGS+
Sbjct: 1   MERSMEIKIVSARDLYNVNLLMKMDVYVVVKLLVTDASGKSKPKSAQKFMTPVDKEGGSN 60

Query: 61  PIWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSM 120
           PIWNFSVKF++DEAA RAN LTLVFKLRCQRNLGDRDIGEVYVPVKELLDS  +GKGDSM
Sbjct: 61  PIWNFSVKFSVDEAAVRANCLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSASEGKGDSM 120

Query: 121 QHLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNLV 165
           QHLSYQVRKPSGNPQGVLNFAF+FG+N S GPIKPD     N V
Sbjct: 121 QHLSYQVRKPSGNPQGVLNFAFRFGENSSSGPIKPDPAHFHNPV 164

[Close]
BLAST of Carg20116 vs. TrEMBL
Match: tr|A0A1U8APE4|A0A1U8APE4_NELNU (protein SRC2 OS=Nelumbo nucifera OX=4432 GN=LOC104606111 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 90/147 (61.22%), Postives = 115/147 (78.23%), Query Frame = 0 

Query: 3   RSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPI 62
           R+++I V+SA DL +VNL +KMDVYAVV L     SG     S  K KTP+DK+GG+ P 
Sbjct: 4   RTLDITVISAKDLKDVNLFSKMDVYAVVSL-----SG----DSRSKHKTPIDKDGGTSPS 63

Query: 63  WNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSMQH 122
           WNF +KF +DEAAA+ NRL LVF+LRC R+LGD+DIG+V+VPVKELLD+TGDGK  S Q 
Sbjct: 64  WNFPMKFTVDEAAAKQNRLMLVFELRCDRSLGDKDIGQVHVPVKELLDNTGDGK--SAQF 123

Query: 123 LSYQVRKPSGNPQGVLNFAFKFGDNLS 150
           +SYQVRKPSG P+G LNF++KFG+ ++
Sbjct: 124 VSYQVRKPSGKPKGTLNFSYKFGEKVT 139

[Close]
BLAST of Carg20116 vs. TrEMBL
Match: tr|B9HSC2|B9HSC2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G024200v3 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.8e-41
Identity = 98/191 (51.31%), Postives = 131/191 (68.59%), Query Frame = 0 

Query: 2   ERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHP 61
           +R++EI V+SA DL +VN ++KMDVYAVV +   D+  K  PK  QK KTPVD++GG +P
Sbjct: 3   QRTLEINVISARDLKDVNYISKMDVYAVVSISGVDS--KQQPK--QKTKTPVDRDGGKNP 62

Query: 62  IWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSMQ 121
            WNF +KF I E +   N L+LVFKL+C+R LGD+DIGEV VP+KELLDS GDGK  SM+
Sbjct: 63  TWNFPIKFTIPETSLAENHLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGK--SMK 122

Query: 122 HLSYQVRKPSGNPQGVLNFAFKFG--DNLSFGPIKPDSVQTSNLVS---AAYPPESSSLA 181
            +SYQVRKPSG P+G +NF+FKFG  + +        + + +N  S   AAYP   +S+ 
Sbjct: 123 FVSYQVRKPSGKPKGEINFSFKFGEIEKVVVPEASSSAAKATNSNSQPVAAYPAGPTSVP 182

Query: 182 VAHGGAHPLPP 188
               G++P PP
Sbjct: 183 YGGPGSYPPPP 187

[Close]
BLAST of Carg20116 vs. TrEMBL
Match: tr|A0A251J1N6|A0A251J1N6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G013300 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 8.2e-41
Identity = 99/191 (51.83%), Postives = 124/191 (64.92%), Query Frame = 0 

Query: 2   ERSMEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHP 61
           +R++EI V+SA DL NVNL +KMDVYAVV +    +    +P+  QK +TPVD++GG++P
Sbjct: 3   QRTLEINVISAKDLKNVNLFSKMDVYAVVSI----SGDSQLPE--QKTRTPVDRDGGTNP 62

Query: 62  IWNFSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSMQ 121
            WNF  KF I     + NRL LVFKLRC R LGD+DIGEV VP+KELLDS GDGK  SMQ
Sbjct: 63  TWNFPAKFTIHVGPVQLNRLNLVFKLRCDRALGDKDIGEVNVPIKELLDSMGDGK--SMQ 122

Query: 122 HLSYQVRKPSGNPQGVLNFAFKFGDNLSFGPIK-PDSVQTSNLVSAAYPPESSSLAVAHG 181
            +SYQVRKPSG P+G LNF++KFGD +  G  K  D          A PP     + ++G
Sbjct: 123 FVSYQVRKPSGKPKGELNFSYKFGDKVVSGFEKVGDKADQPVTAYPAPPPPVVGPSASYG 182

Query: 182 GAHPLPPTPPP 192
              P P   PP
Sbjct: 183 EPGPYPTVLPP 185

The following BLAST results are available for this feature:
BLAST of Carg20116 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956293.12.5e-10299.70protein SRC2-like [Cucurbita moschata][more]
XP_023527775.14.1e-10098.81protein SRC2-like [Cucurbita pepo subsp. pepo][more]
XP_022979860.14.2e-9795.81protein SRC2-like [Cucurbita maxima][more]
XP_004134204.13.2e-7377.05PREDICTED: cyclin-K [Cucumis sativus] >KGN57099.1 hypothetical protein Csa_3G153... [more]
XP_022947962.11.0e-7177.89protein SRC2-like [Cucurbita moschata][more]
BLAST of Carg20116 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16510.18.9e-3350.63Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G09070.15.0e-2842.13soybean gene regulated by cold-2[more]
AT4G15755.11.8e-2540.00Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT4G15740.11.1e-1735.98Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT3G62780.11.8e-1738.89Calcium-dependent lipid-binding (CaLB domain) family protein[more]
BLAST of Carg20116 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04133|SRC2_SOYBN1.2e-3143.32Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1[more]
sp|O04023|SRC2_ARATH9.1e-2742.13Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1[more]
BLAST of Carg20116 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7V9|A0A0A0L7V9_CUCSA2.1e-7377.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153730 PE=4 SV=1[more]
tr|A0A1S3AX20|A0A1S3AX20_CUCME1.4e-6982.93protein SRC2 OS=Cucumis melo OX=3656 GN=LOC103483836 PE=4 SV=1[more]
tr|A0A1U8APE4|A0A1U8APE4_NELNU1.3e-4161.22protein SRC2 OS=Nelumbo nucifera OX=4432 GN=LOC104606111 PE=4 SV=1[more]
tr|B9HSC2|B9HSC2_POPTR2.8e-4151.31Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G024200v3 PE=... [more]
tr|A0A251J1N6|A0A251J1N6_MANES8.2e-4151.83Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G013300 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20116-RACarg20116-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 4..117
e-value: 2.2E-9
score: 47.2
IPR000008C2 domainPFAMPF00168C2coord: 5..112
e-value: 7.0E-11
score: 42.2
IPR000008C2 domainPROSITEPS50004C2coord: 1..102
score: 9.139
IPR035892C2 domain superfamilyGENE3DG3DSA:2.60.40.150coord: 2..152
e-value: 7.7E-14
score: 53.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..198
NoneNo IPR availablePANTHERPTHR32246:SF18C2 DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 2..336
NoneNo IPR availablePANTHERPTHR32246FAMILY NOT NAMEDcoord: 2..336
NoneNo IPR availableCDDcd04051C2_SRC2_likecoord: 4..140
e-value: 1.3182E-51
score: 168.178
NoneNo IPR availableSUPERFAMILYSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 5..145

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20116Cla021731Watermelon (97103) v1carwmB0834
Carg20116Csa3G153730Cucumber (Chinese Long) v2carcuB0854
Carg20116MELO3C006656Melon (DHL92) v3.5.1carmeB0828
Carg20116MELO3C021341Melon (DHL92) v3.5.1carmeB0827
Carg20116ClCG06G005200Watermelon (Charleston Gray)carwcgB0808
Carg20116CSPI03G14330Wild cucumber (PI 183967)carcpiB0874
Carg20116Cucsa.253170Cucumber (Gy14) v1carcgyB0960
Carg20116CmaCh08G012220Cucurbita maxima (Rimu)carcmaB1156
Carg20116CmaCh06G014920Cucurbita maxima (Rimu)carcmaB1155
Carg20116CmoCh06G014880Cucurbita moschata (Rifu)carcmoB1125
Carg20116CmoCh08G011950Cucurbita moschata (Rifu)carcmoB1126
Carg20116CmoCh14G016640Cucurbita moschata (Rifu)carcmoB1123
Carg20116Lsi09G014210Bottle gourd (USVL1VR-Ls)carlsiB760
Carg20116Lsi05G015320Bottle gourd (USVL1VR-Ls)carlsiB761
Carg20116Cp4.1LG08g04770Cucurbita pepo (Zucchini)carcpeB1165
Carg20116Cp4.1LG03g11380Cucurbita pepo (Zucchini)carcpeB1164
Carg20116CsGy3G014480Cucumber (Gy14) v2carcgybB0828
Carg20116MELO3C021341.2Melon (DHL92) v3.6.1carmedB0839
Carg20116MELO3C006656.2Melon (DHL92) v3.6.1carmedB0840
Carg20116CsaV3_3G014550Cucumber (Chinese Long) v3carcucB0878
Carg20116Cla97C05G087500Watermelon (97103) v2carwmbB0867
Carg20116Bhi01G000707Wax gourdcarwgoB0972
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20116Carg17350Silver-seed gourdcarcarB544
The following block(s) are covering this gene:
GeneOrganismBlock
Carg20116Silver-seed gourdcarcarB087
Carg20116Cucurbita maxima (Rimu)carcmaB1153
Carg20116Cucurbita maxima (Rimu)carcmaB1154
Carg20116Cucurbita moschata (Rifu)carcmoB1124
Carg20116Cucurbita pepo (Zucchini)carcpeB1163
Carg20116Watermelon (Charleston Gray)carwcgB0807
Carg20116Watermelon (97103) v1carwmB0835
Carg20116Watermelon (97103) v2carwmbB0868