Carg17350 (gene) Silver-seed gourd

Overview
NameCarg17350
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein SRC2
LocationCucurbita_argyrosperma_scaffold_092 : 144876 .. 145817 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCAAGGTTGTCTCTGCCAGAGACCTAAACAACGTCAATTTCCTCATGAAGATGGACGTTTACACCGTCGTCAAGCTCGTGACCACCGACAATGCCAAGTCTAAATCCAGCCAGAGATTTAAAACTCCCGTCGATAAAGAAGGTGGCAGCAATCCGATCTGGAATTTCTCTATCAAATTCGCTATCGACGAGGCCGCCGCTAGGGCTAACCGCCTTACCCTCAATTTCAAGCTCTGTTGCCAGCGGAATCTCGGCGATAGGGATATCGGCAAGGTCTACGTTCCGGTGAAGGAGCTTCTTGATTCCGCCGGCGACGGAAAAGGAGATTGGATGCAGCATCTTAGTTATCAGGTGAGAAAACCGTCTGGAAATCCCCAGGGGGTCTTAAATTTCTCCTTCAAATTTACGGACAATTCGCCATCCGGTCCTGTTCAACCGGGACCGGTCCAGACTTATAGCCCGGTTTCCGCTGACTCGAGTTCATTCGCCGTCGCTCACGGTGGGGCTTTTCCTCCTCCTCTGCCTCCTCGGTCGGAAGCTTACCATCCAGCTTCGAATTCGCACCCGATCCCTCCGCCGAAAGTGGTGTCGCAGGAGGCAGGGTATACAGTTTACCCGCAGCTGCCAATGGGATACAGCGCGTACTCTCCGGCGCCGTCGTATGGCTCGTATGTACCGGCACCGTTGTACAGCTCGTACGCGCCGGAGCGGTCTCAACCTGGGTATGGTTACAATCACCAACAGCGGCCATCTACGCCGGCGTATGGGTACCGGCCTCCGCCGGCCTACGCATATCCTACGCCGCCGTCGTATTATCCGCCGAAGCCGCAGAGAAAGAAGAACCACATGGGATTAGGATTGGGAGCTGGGTTGGTCGGGGGAATGTTGGGCGGGCTGTTGATCGGAGATATAGCGTCGGACGCCGCAGACGGCTGA

mRNA sequence

ATGGAGATCAAGGTTGTCTCTGCCAGAGACCTAAACAACGTCAATTTCCTCATGAAGATGGACGTTTACACCGTCGTCAAGCTCGTGACCACCGACAATGCCAAGTCTAAATCCAGCCAGAGATTTAAAACTCCCGTCGATAAAGAAGGTGGCAGCAATCCGATCTGGAATTTCTCTATCAAATTCGCTATCGACGAGGCCGCCGCTAGGGCTAACCGCCTTACCCTCAATTTCAAGCTCTGTTGCCAGCGGAATCTCGGCGATAGGGATATCGGCAAGGTCTACGTTCCGGTGAAGGAGCTTCTTGATTCCGCCGGCGACGGAAAAGGAGATTGGATGCAGCATCTTAGTTATCAGGTGAGAAAACCGTCTGGAAATCCCCAGGGGGTCTTAAATTTCTCCTTCAAATTTACGGACAATTCGCCATCCGGTCCTGTTCAACCGGGACCGGTCCAGACTTATAGCCCGGTTTCCGCTGACTCGAGTTCATTCGCCGTCGCTCACGGTGGGGCTTTTCCTCCTCCTCTGCCTCCTCGGTCGGAAGCTTACCATCCAGCTTCGAATTCGCACCCGATCCCTCCGCCGAAAGTGGTGTCGCAGGAGGCAGGGTATACAGTTTACCCGCAGCTGCCAATGGGATACAGCGCGTACTCTCCGGCGCCGTCGTATGGCTCGTATGTACCGGCACCGTTGTACAGCTCGTACGCGCCGGAGCGGTCTCAACCTGGGTATGGTTACAATCACCAACAGCGGCCATCTACGCCGGCGTATGGGTACCGGCCTCCGCCGGCCTACGCATATCCTACGCCGCCGTCGTATTATCCGCCGAAGCCGCAGAGAAAGAAGAACCACATGGGATTAGGATTGGGAGCTGGGTTGGTCGGGGGAATGTTGGGCGGGCTGTTGATCGGAGATATAGCGTCGGACGCCGCAGACGGCTGA

Coding sequence (CDS)

ATGGAGATCAAGGTTGTCTCTGCCAGAGACCTAAACAACGTCAATTTCCTCATGAAGATGGACGTTTACACCGTCGTCAAGCTCGTGACCACCGACAATGCCAAGTCTAAATCCAGCCAGAGATTTAAAACTCCCGTCGATAAAGAAGGTGGCAGCAATCCGATCTGGAATTTCTCTATCAAATTCGCTATCGACGAGGCCGCCGCTAGGGCTAACCGCCTTACCCTCAATTTCAAGCTCTGTTGCCAGCGGAATCTCGGCGATAGGGATATCGGCAAGGTCTACGTTCCGGTGAAGGAGCTTCTTGATTCCGCCGGCGACGGAAAAGGAGATTGGATGCAGCATCTTAGTTATCAGGTGAGAAAACCGTCTGGAAATCCCCAGGGGGTCTTAAATTTCTCCTTCAAATTTACGGACAATTCGCCATCCGGTCCTGTTCAACCGGGACCGGTCCAGACTTATAGCCCGGTTTCCGCTGACTCGAGTTCATTCGCCGTCGCTCACGGTGGGGCTTTTCCTCCTCCTCTGCCTCCTCGGTCGGAAGCTTACCATCCAGCTTCGAATTCGCACCCGATCCCTCCGCCGAAAGTGGTGTCGCAGGAGGCAGGGTATACAGTTTACCCGCAGCTGCCAATGGGATACAGCGCGTACTCTCCGGCGCCGTCGTATGGCTCGTATGTACCGGCACCGTTGTACAGCTCGTACGCGCCGGAGCGGTCTCAACCTGGGTATGGTTACAATCACCAACAGCGGCCATCTACGCCGGCGTATGGGTACCGGCCTCCGCCGGCCTACGCATATCCTACGCCGCCGTCGTATTATCCGCCGAAGCCGCAGAGAAAGAAGAACCACATGGGATTAGGATTGGGAGCTGGGTTGGTCGGGGGAATGTTGGGCGGGCTGTTGATCGGAGATATAGCGTCGGACGCCGCAGACGGCTGA

Protein sequence

MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSIKFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRSEAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPSYGSYVPAPLYSSYAPERSQPGYGYNHQQRPSTPAYGYRPPPAYAYPTPPSYYPPKPQRKKNHMGLGLGAGLVGGMLGGLLIGDIASDAADG
Homology
[Close]
BLAST of Carg17350 vs. NCBI nr
Match: XP_022947962.1 (protein SRC2-like [Cucurbita moschata])

HSP 1 Score: 481.1 bits (1237), Expect = 2.9e-132
Identity = 287/288 (99.65%), Postives = 287/288 (99.65%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI
Sbjct: 5   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 64

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQV 120
           KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGD MQHLSYQV
Sbjct: 65  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDSMQHLSYQV 124

Query: 121 RKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRS 180
           RKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRS
Sbjct: 125 RKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRS 184

Query: 181 EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX 240
           EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX
Sbjct: 185 EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX 244

Query: 241 XXXXXYNHQQRPSTPAYGYRPXXXXXXXXXXXXXXXXXXRKKNHMGLG 289
           XXXXXYNHQQRPSTPAYGYRPXXXXXXXXXXXXXXXXXXRKKNHMGLG
Sbjct: 245 XXXXXYNHQQRPSTPAYGYRPXXXXXXXXXXXXXXXXXXRKKNHMGLG 292

[Close]
BLAST of Carg17350 vs. NCBI nr
Match: XP_022973779.1 (protein SRC2-like [Cucurbita maxima])

HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128
Identity = 279/288 (96.88%), Postives = 281/288 (97.57%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           MEIKVVSARDLNNVNFLMKMDVYTVVKLVTT NAKSKSSQRFKTPVDKEGGSNPIWNFSI
Sbjct: 5   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTVNAKSKSSQRFKTPVDKEGGSNPIWNFSI 64

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQV 120
           KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGD MQHLSYQV
Sbjct: 65  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDSMQHLSYQV 124

Query: 121 RKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRS 180
           RKPSGNPQGVLNFSFKF DNSPSGPVQPGPVQ+YSPVSA+SSSFAVAHGGAFPPPLPPRS
Sbjct: 125 RKPSGNPQGVLNFSFKFADNSPSGPVQPGPVQSYSPVSAESSSFAVAHGGAFPPPLPPRS 184

Query: 181 EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX 240
           EAYHP SNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX
Sbjct: 185 EAYHPTSNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX 244

Query: 241 XXXXXYNHQQRPSTPAYGYRPXXXXXXXXXXXXXXXXXXRKKNHMGLG 289
           XXXXXYNHQQRPS PAYGYRPXXXXXXXXXXXXXXXX  RKKNHMGLG
Sbjct: 245 XXXXXYNHQQRPSAPAYGYRPXXXXXXXXXXXXXXXXPQRKKNHMGLG 292

[Close]
BLAST of Carg17350 vs. NCBI nr
Match: XP_023539903.1 (protein SRC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.1 bits (1198), Expect = 9.5e-128
Identity = 275/288 (95.49%), Postives = 277/288 (96.18%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           MEIKVVSARDLNNVNFLMKMDVYTVVKLVT DNAKSKSSQRFKTPVDKEGGSNPIWNFSI
Sbjct: 5   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTADNAKSKSSQRFKTPVDKEGGSNPIWNFSI 64

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQV 120
           KFAIDEAAARANRLTLNFKLCCQRNLGDRD+GKVYVPVKELLDSAGDGKGD MQHLSYQV
Sbjct: 65  KFAIDEAAARANRLTLNFKLCCQRNLGDRDVGKVYVPVKELLDSAGDGKGDSMQHLSYQV 124

Query: 121 RKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRS 180
           RKPSGNPQGVLNFSFKF DNSPSG VQPG VQ+YS VSADSSSFAVAHGGAFPPPLPPRS
Sbjct: 125 RKPSGNPQGVLNFSFKFADNSPSGSVQPGSVQSYSSVSADSSSFAVAHGGAFPPPLPPRS 184

Query: 181 EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX 240
           EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX
Sbjct: 185 EAYHPASNSHPIPPPKVVSQEAGYTVYPQLPMGYSAYSPAPXXXXXXXXXXXXXXXXXXX 244

Query: 241 XXXXXYNHQQRPSTPAYGYRPXXXXXXXXXXXXXXXXXXRKKNHMGLG 289
           XXXXXYNHQQRPSTPAYGYRP XXXXXXXXXXXXX    RKKNHMGLG
Sbjct: 245 XXXXXYNHQQRPSTPAYGYRPPXXXXXXXXXXXXXPKPQRKKNHMGLG 292

[Close]
BLAST of Carg17350 vs. NCBI nr
Match: XP_022979860.1 (protein SRC2-like [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 1.4e-70
Identity = 147/186 (79.03%), Postives = 159/186 (85.48%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKS---KSSQRFKTPVDKEGGSNPIWN 60
           MEIKVVSA DLNNVN L KMDVY VVKL+TTD +     KS+Q+FKTPVDKEG S+PIWN
Sbjct: 5   MEIKVVSAGDLNNVNLLTKMDVYAVVKLLTTDASGKFIPKSAQKFKTPVDKEGRSHPIWN 64

Query: 61  FSIKFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLS 120
           FS+KFAIDEAAARANRLTL FKL CQRNLGDRDIG+VYVPVKELLDSAGDGKGD MQHLS
Sbjct: 65  FSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSAGDGKGDSMQHLS 124

Query: 121 YQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSA----DSSSFAVAHGGAFP 179
           YQVRKPSGNPQGVLNF+FKF DN PSGP++P  VQT +PVSA    +SSS AVAHGGA P
Sbjct: 125 YQVRKPSGNPQGVLNFAFKFEDNLPSGPIKPDSVQTSNPVSAAYPPESSSVAVAHGGAHP 184

[Close]
BLAST of Carg17350 vs. NCBI nr
Match: XP_022956293.1 (protein SRC2-like [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 7.7e-69
Identity = 144/186 (77.42%), Postives = 156/186 (83.87%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKS---KSSQRFKTPVDKEGGSNPIWN 60
           MEIKVVSA DLNNVN L KMDVY VVKL+T D +     KS+Q+FKTPVDKEGGS+PIWN
Sbjct: 5   MEIKVVSAGDLNNVNLLTKMDVYAVVKLLTADASGKFIPKSAQKFKTPVDKEGGSHPIWN 64

Query: 61  FSIKFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLS 120
           FS+KFAIDEAAARANRLTL FKL CQRNLGDRDIG+VYVPVKELLDS GDGKGD MQHLS
Sbjct: 65  FSVKFAIDEAAARANRLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSTGDGKGDSMQHLS 124

Query: 121 YQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSA----DSSSFAVAHGGAFP 179
           YQVRKPSGNPQGVLNF+FKF DN   GP++P  VQT +PVSA    +SSS AVAHGGA P
Sbjct: 125 YQVRKPSGNPQGVLNFAFKFGDNLSFGPIKPDSVQTSNPVSAAYPPESSSLAVAHGGAHP 184

[Close]
BLAST of Carg17350 vs. TAIR10
Match: AT3G16510.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-30
Identity = 72/154 (46.75%), Postives = 97/154 (62.99%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +E+ V SA+DL NVN + KMDVY VV +   D   S+ + + KTP+D+ G S P WN ++
Sbjct: 6   LELNVYSAKDLENVNLITKMDVYAVVWITGDD---SRKNHKEKTPIDRTGESEPTWNHTV 65

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELL------DSAGDGKGDWMQ 120
           KF++D+  A   RLTL  KL C R  GD+D+G+V VPV ELL       S GDG+G  M+
Sbjct: 66  KFSVDQRLAHEGRLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQG-MMR 125

Query: 121 HLSYQVRKPSGNPQGVLNFSFKFTDNSPSGPVQP 149
            ++YQVR P G  QG L FS++F D+    P QP
Sbjct: 126 FVTYQVRTPFGKGQGSLTFSYRF-DSPTFKPDQP 154

[Close]
BLAST of Carg17350 vs. TAIR10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 68/182 (37.36%), Postives = 106/182 (58.24%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +E+ + SAR+L NVN + KM+V+T    +T +   ++  Q+ KT VD+ GGSNP WN +I
Sbjct: 6   LELNINSARNLLNVNLITKMNVFTA---ITINGENTRKKQKAKTTVDRYGGSNPTWNQTI 65

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSA-----GDGKGDWMQH 120
           KF++DE +AR    +L  ++  +R LG+++IG+V +P+ ELL++      GDG    M+ 
Sbjct: 66  KFSVDERSARGGHSSLVMRVISRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDHEMKL 125

Query: 121 LSYQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPP 178
           +SYQVR  SG   G L+FS++F  N         PV T       ++   + H  + PP 
Sbjct: 126 MSYQVRTSSGKRSGSLSFSYRFKPNV--------PVITNRSCVDSAAPSQIEHAPSAPPE 176

[Close]
BLAST of Carg17350 vs. TAIR10
Match: AT1G09070.1 (soybean gene regulated by cold-2)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 73/193 (37.82%), Postives = 107/193 (55.44%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +++ ++SA DL +V  + K D+Y VV +    N  +++ Q  KT VDK+ G+ P W   +
Sbjct: 6   LDLTIISAEDLKDVQLIGKQDLYAVVSI----NGDARTKQ--KTKVDKDCGTKPKWKHQM 65

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNL-GDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQ 120
           K  +D+AAAR NRLTL F++   R + GD+ +G+V VPVKELLD     KGD  + ++Y 
Sbjct: 66  KLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLD---QNKGDEEKTVTYA 125

Query: 121 VRKPSGNPQGVLNFSFKF----TDNSPSGPVQPGP-VQTYSPVSADSSSFAVAHG--GAF 180
           VR P+G  +G L FSFKF    T  S SGP  P P    +  +    +++   HG   A+
Sbjct: 126 VRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPVPSAMDHKTMDQPVTAYPPGHGAPSAY 185

Query: 181 PPPLPPRSEAYHP 186
           P         Y P
Sbjct: 186 PXXXXXXXSGYPP 189

[Close]
BLAST of Carg17350 vs. TAIR10
Match: AT3G62780.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 89.0 bits (219), Expect = 5.7e-18
Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIW-NFS 60
           +EI V SA+ L  V+   KMDV+  VKL  + + K    +  +T   ++GG++P W N  
Sbjct: 6   LEINVTSAKGLKKVS---KMDVFVAVKL--SGDPKCSDHREQRTQAARDGGTSPKWSNDV 65

Query: 61  IKFAIDEAAARANRLTLNFKLCCQRNLG-DRDIGKVYVPVKELLDSAGDGKGDWMQHLSY 120
           +KF +D+  A ANRL + FK+ C++  G D+DIG+V+V VKELLD  G+ K    ++++Y
Sbjct: 66  MKFILDQNLAEANRLVITFKIKCEQRGGVDKDIGEVHVQVKELLDHLGNDK-TGQRYVTY 125

Query: 121 QVRKPSGNPQGVLNFSFKFTD--NSPSG----------PVQPGPVQTYSPV 158
           Q+    G  +  ++F++ FT     P+G          PV+  PV TY PV
Sbjct: 126 QI----GKSKADISFTYSFTGPVEVPTGGGCSRYAAQAPVR--PVSTYRPV 164

[Close]
BLAST of Carg17350 vs. TAIR10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 88.2 bits (217), Expect = 9.8e-18
Identity = 55/168 (32.74%), Postives = 93/168 (55.36%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +E+K+VSA D+N+++   KMDVY VV +   +   ++  Q  KTP+D +GGSNP WN ++
Sbjct: 41  LELKIVSASDVNHIDATDKMDVYAVVSI---NGDTTQQKQAAKTPIDYDGGSNPTWNHTV 100

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRD--IGKVYVPVKELLDS-----AGDGKGDWM 120
           KF+++E  A    LT+  KL      GD D  +G+V V V++LL S       +G  + M
Sbjct: 101 KFSVNEREANEGLLTITVKLFSYWLEGDNDLYLGEVNVSVQDLLASNPIPPFTNGNINKM 160

Query: 121 QHLSYQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADS 162
           + ++  ++    +    ++ S++F         +P PV+ + P S DS
Sbjct: 161 KSMTCPIKATEKSTNTTVSLSYRF---------KPVPVEEFYPPSPDS 196

[Close]
BLAST of Carg17350 vs. Swiss-Prot
Match: sp|O04133|SRC2_SOYBN (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-28
Identity = 79/205 (38.54%), Postives = 112/205 (54.63%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +E+ ++SA+D+ NVN   KMDVY  V L    +      Q   T V K+ GSNP WN+ +
Sbjct: 8   LELNIISAKDIKNVNLFSKMDVYAAVSL----SGDPLHPQGATTHVHKDAGSNPTWNYPV 67

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQV 120
           KF+++E+ A+ NRL+L  KL   R LGD  IG V+VP++ELLD+ GD      + +SYQV
Sbjct: 68  KFSVNESLAKENRLSLEIKLISDRTLGDTVIGTVHVPLRELLDNPGDDSS--FRQVSYQV 127

Query: 121 RKPSGNPQGVLNFSFKFTDNSPSGPVQ--------PGPVQTYSPVSADSSSFAVAHGGAF 180
            K S   +G LNFS+KF ++ P+   +          PV  Y P  A SSS        +
Sbjct: 128 MKQSRKSKGSLNFSYKFGEHVPAPAAKTPKAAKAGQEPVMAYPPAGAGSSSM------PY 187

Query: 181 PPPLPPRSEAYHPASNSHPIPPPKV 198
             P PP  + Y  A+  +  PP +V
Sbjct: 188 GTPHPPPPQQY--AATGYGYPPQQV 198

[Close]
BLAST of Carg17350 vs. Swiss-Prot
Match: sp|O04023|SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 73/193 (37.82%), Postives = 107/193 (55.44%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +++ ++SA DL +V  + K D+Y VV +    N  +++ Q  KT VDK+ G+ P W   +
Sbjct: 6   LDLTIISAEDLKDVQLIGKQDLYAVVSI----NGDARTKQ--KTKVDKDCGTKPKWKHQM 65

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNL-GDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQ 120
           K  +D+AAAR NRLTL F++   R + GD+ +G+V VPVKELLD     KGD  + ++Y 
Sbjct: 66  KLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLD---QNKGDEEKTVTYA 125

Query: 121 VRKPSGNPQGVLNFSFKF----TDNSPSGPVQPGP-VQTYSPVSADSSSFAVAHG--GAF 180
           VR P+G  +G L FSFKF    T  S SGP  P P    +  +    +++   HG   A+
Sbjct: 126 VRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPVPSAMDHKTMDQPVTAYPPGHGAPSAY 185

Query: 181 PPPLPPRSEAYHP 186
           P         Y P
Sbjct: 186 PXXXXXXXSGYPP 189

[Close]
BLAST of Carg17350 vs. TrEMBL
Match: tr|A0A1S3AX20|A0A1S3AX20_CUCME (protein SRC2 OS=Cucumis melo OX=3656 GN=LOC103483836 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.9e-65
Identity = 137/234 (58.55%), Postives = 161/234 (68.80%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTD---NAKSKSSQRFKTPVDKEGGSNPIWN 60
           MEIK+VSARDL NVN LMKMDVY VVKL+ TD    +K KS+Q+F TPVDKEGGSNPIWN
Sbjct: 5   MEIKIVSARDLYNVNLLMKMDVYVVVKLLVTDASGKSKPKSAQKFMTPVDKEGGSNPIWN 64

Query: 61  FSIKFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLS 120
           FS+KF++DEAA RAN LTL FKL CQRNLGDRDIG+VYVPVKELLDSA +GKGD MQHLS
Sbjct: 65  FSVKFSVDEAAVRANCLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSASEGKGDSMQHLS 124

Query: 121 YQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPV-------------------- 180
           YQVRKPSGNPQGVLNF+F+F +NS SGP++P P   ++PV                    
Sbjct: 125 YQVRKPSGNPQGVLNFAFRFGENSSSGPIKPDPAHFHNPVXXXXXXXXXXXXXXXXXXXX 184

Query: 181 ---SADSSSFAVAHGGAFPPPLPPRSEAYHPASNSHPIPPPKVVSQEAGYTVYP 209
                               PLPP+ E +   SN +P+ PPK+ + E G+T YP
Sbjct: 185 XXXXXXXXXXXXXXXXXXXXPLPPQPEIHSQPSNLYPVLPPKLAAPEIGFTAYP 238

[Close]
BLAST of Carg17350 vs. TrEMBL
Match: tr|A0A0A0L7V9|A0A0A0L7V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153730 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.8e-64
Identity = 128/179 (71.51%), Postives = 150/179 (83.80%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTD---NAKSKSSQRFKTPVDKEGGSNPIWN 60
           MEIKVVSARDLNNVN LMKMDVY +VKL+ TD    +K KS+Q+F TPVDKEGGSNPIWN
Sbjct: 5   MEIKVVSARDLNNVNLLMKMDVYVLVKLLVTDISGKSKPKSAQKFMTPVDKEGGSNPIWN 64

Query: 61  FSIKFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLS 120
           FS+KF++DEAA RAN LTL FKL CQRNLGDRDIG+VYVPVKELLDSAG+GKGD MQHLS
Sbjct: 65  FSVKFSVDEAAVRANCLTLVFKLRCQRNLGDRDIGEVYVPVKELLDSAGEGKGDLMQHLS 124

Query: 121 YQVRKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSA----DSSSFAVAHGGAF 173
           YQVRKPSG+PQGVLNF+F+F +NS SGPV+P  + +++PV      + S  AV+HGG +
Sbjct: 125 YQVRKPSGSPQGVLNFAFRFGENSNSGPVKPDQIHSHNPVPTYPPLEPSPVAVSHGGGY 183

[Close]
BLAST of Carg17350 vs. TrEMBL
Match: tr|A0A2I4F296|A0A2I4F296_9ROSI (protein SRC2 OS=Juglans regia OX=51240 GN=LOC108994840 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +EI V SA+DL +++   KMDVY VV L       S   Q+ KT VD+EGG++P WNF +
Sbjct: 57  LEINVTSAKDLKDLSLFSKMDVYVVVSL-------SGDKQKAKTKVDREGGTSPSWNFPV 116

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNL-GDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQ 120
           KF IDE+AAR NRL L FKL C R+L GD+DIG VYVPV ELL+S GDGK   MQ +SYQ
Sbjct: 117 KFTIDESAARQNRLNLEFKLRCDRSLGGDKDIGVVYVPVAELLNSTGDGKS--MQFVSYQ 176

Query: 121 VRKPSGNPQGVLNFSFKFTDNSPSGPVQPGP-VQTYSPVSADSS----SFAVAHGGAFPP 179
           V KPSG PQG+LNFS+KFT+   +G V   P  + + PV+A  +    + A+ + G +PP
Sbjct: 177 VTKPSGKPQGILNFSYKFTEKVAAGGVSLVPEAKAHEPVTAYPAPVVGTSALPYDGLYPP 231

[Close]
BLAST of Carg17350 vs. TrEMBL
Match: tr|B9HSC2|B9HSC2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G024200v3 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.1e-37
Identity = 93/195 (47.69%), Postives = 119/195 (61.03%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           +EI V+SARDL +VN++ KMDVY VV +   D +K +  Q+ KTPVD++GG NP WNF I
Sbjct: 6   LEINVISARDLKDVNYISKMDVYAVVSISGVD-SKQQPKQKTKTPVDRDGGKNPTWNFPI 65

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQV 120
           KF I E +   N L+L FKL C+R LGD+DIG+V VP+KELLDSAGDGK   M+ +SYQV
Sbjct: 66  KFTIPETSLAENHLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGKS--MKFVSYQV 125

Query: 121 RKPSGNPQGVLNFSFKFTDNSPSGPVQPGPVQTYSPVSADSSSFAVAHGGAFPPPLPPRS 180
           RKPSG P+G +NFSFKF           G ++      A SS+    +  + P    P  
Sbjct: 126 RKPSGKPKGEINFSFKF-----------GEIEKVVVPEASSSAAKATNSNSQPVAAYPAG 185

Query: 181 EAYHPASNSHPIPPP 196
               P       PPP
Sbjct: 186 PTSVPYGGPGSYPPP 186

[Close]
BLAST of Carg17350 vs. TrEMBL
Match: tr|A0A1U8APE4|A0A1U8APE4_NELNU (protein SRC2 OS=Nelumbo nucifera OX=4432 GN=LOC104606111 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-36
Identity = 80/137 (58.39%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 1   MEIKVVSARDLNNVNFLMKMDVYTVVKLVTTDNAKSKSSQRFKTPVDKEGGSNPIWNFSI 60
           ++I V+SA+DL +VN   KMDVY VV L         S  + KTP+DK+GG++P WNF +
Sbjct: 6   LDITVISAKDLKDVNLFSKMDVYAVVSL------SGDSRSKHKTPIDKDGGTSPSWNFPM 65

Query: 61  KFAIDEAAARANRLTLNFKLCCQRNLGDRDIGKVYVPVKELLDSAGDGKGDWMQHLSYQV 120
           KF +DEAAA+ NRL L F+L C R+LGD+DIG+V+VPVKELLD+ GDGK    Q +SYQV
Sbjct: 66  KFTVDEAAAKQNRLMLVFELRCDRSLGDKDIGQVHVPVKELLDNTGDGKS--AQFVSYQV 125

Query: 121 RKPSGNPQGVLNFSFKF 138
           RKPSG P+G LNFS+KF
Sbjct: 126 RKPSGKPKGTLNFSYKF 134

The following BLAST results are available for this feature:
BLAST of Carg17350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947962.12.9e-13299.65protein SRC2-like [Cucurbita moschata][more]
XP_022973779.11.1e-12896.88protein SRC2-like [Cucurbita maxima][more]
XP_023539903.19.5e-12895.49protein SRC2-like [Cucurbita pepo subsp. pepo][more]
XP_022979860.11.4e-7079.03protein SRC2-like [Cucurbita maxima][more]
XP_022956293.17.7e-6977.42protein SRC2-like [Cucurbita moschata][more]
BLAST of Carg17350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16510.15.0e-3046.75Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT4G15755.11.2e-2637.36Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G09070.11.1e-2437.82soybean gene regulated by cold-2[more]
AT3G62780.15.7e-1836.84Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT4G15740.19.8e-1832.74Calcium-dependent lipid-binding (CaLB domain) family protein[more]
BLAST of Carg17350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04133|SRC2_SOYBN2.6e-2838.54Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1[more]
sp|O04023|SRC2_ARATH1.9e-2337.82Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1[more]
BLAST of Carg17350 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AX20|A0A1S3AX20_CUCME9.9e-6558.55protein SRC2 OS=Cucumis melo OX=3656 GN=LOC103483836 PE=4 SV=1[more]
tr|A0A0A0L7V9|A0A0A0L7V9_CUCSA3.8e-6471.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153730 PE=4 SV=1[more]
tr|A0A2I4F296|A0A2I4F296_9ROSI1.3e-3751.63protein SRC2 OS=Juglans regia OX=51240 GN=LOC108994840 PE=4 SV=1[more]
tr|B9HSC2|B9HSC2_POPTR5.1e-3747.69Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G024200v3 PE=... [more]
tr|A0A1U8APE4|A0A1U8APE4_NELNU1.5e-3658.39protein SRC2 OS=Nelumbo nucifera OX=4432 GN=LOC104606111 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17350-RACarg17350-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 1..110
e-value: 3.8E-8
score: 43.1
IPR000008C2 domainPFAMPF00168C2coord: 2..105
e-value: 3.6E-12
score: 46.4
IPR000008C2 domainPROSITEPS50004C2coord: 1..95
score: 10.323
IPR035892C2 domain superfamilyGENE3DG3DSA:2.60.40.150coord: 1..147
e-value: 1.9E-17
score: 65.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..261
NoneNo IPR availablePANTHERPTHR32246FAMILY NOT NAMEDcoord: 1..279
NoneNo IPR availablePANTHERPTHR32246:SF18C2 DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..279
NoneNo IPR availableCDDcd04051C2_SRC2_likecoord: 1..133
e-value: 8.5983E-50
score: 162.785
NoneNo IPR availableSUPERFAMILYSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 2..154

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17350Cla021731Watermelon (97103) v1carwmB0603
Carg17350Csa3G153730Cucumber (Chinese Long) v2carcuB0633
Carg17350MELO3C006656Melon (DHL92) v3.5.1carmeB0610
Carg17350MELO3C021341Melon (DHL92) v3.5.1carmeB0609
Carg17350ClCG06G005200Watermelon (Charleston Gray)carwcgB0589
Carg17350CSPI03G14330Wild cucumber (PI 183967)carcpiB0639
Carg17350Cucsa.253170Cucumber (Gy14) v1carcgyB0681
Carg17350CmaCh08G012220Cucurbita maxima (Rimu)carcmaB0850
Carg17350CmaCh06G014920Cucurbita maxima (Rimu)carcmaB0849
Carg17350CmoCh06G014880Cucurbita moschata (Rifu)carcmoB0825
Carg17350CmoCh08G011950Cucurbita moschata (Rifu)carcmoB0826
Carg17350CmoCh14G016640Cucurbita moschata (Rifu)carcmoB0823
Carg17350Lsi09G014210Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17350Lsi05G015320Bottle gourd (USVL1VR-Ls)carlsiB552
Carg17350Cp4.1LG03g11380Cucurbita pepo (Zucchini)carcpeB0860
Carg17350Cp4.1LG17g00890Cucurbita pepo (Zucchini)carcpeB0859
Carg17350Cp4.1LG08g04770Cucurbita pepo (Zucchini)carcpeB0861
Carg17350CsGy3G014480Cucumber (Gy14) v2carcgybB0605
Carg17350MELO3C021341.2Melon (DHL92) v3.6.1carmedB0615
Carg17350MELO3C006656.2Melon (DHL92) v3.6.1carmedB0616
Carg17350CsaV3_3G014550Cucumber (Chinese Long) v3carcucB0640
Carg17350Cla97C05G087500Watermelon (97103) v2carwmbB0631
Carg17350Bhi12G001838Wax gourdcarwgoB0720
Carg17350Bhi01G000707Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17350Carg18837Silver-seed gourdcarcarB543
Carg17350Carg20116Silver-seed gourdcarcarB544
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17350Silver-seed gourdcarcarB083
Carg17350Cucurbita maxima (Rimu)carcmaB0847
Carg17350Cucurbita maxima (Rimu)carcmaB0848
Carg17350Cucurbita moschata (Rifu)carcmoB0824
Carg17350Cucurbita pepo (Zucchini)carcpeB0857
Carg17350Watermelon (Charleston Gray)carwcgB0588
Carg17350Watermelon (97103) v1carwmB0604
Carg17350Watermelon (97103) v2carwmbB0632