Carg19957 (gene) Silver-seed gourd

Overview
NameCarg19957
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein NRT1/ PTR FAMILY 5.6
LocationCucurbita_argyrosperma_scaffold_167 : 65670 .. 67928 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAGTAGAGTCCAAGATACTGGGCGGTTGTTGTCCAGATCCAACTTATTGGGAGAACTGACAACCAAATGTGTGAGATGTCGAAAAGCTTGGAGTGTGAAGCTAATGGCGGCGATGACAAATGGGTTGCTGATTCTTCTCTTGATTACAAAGGGAGGCTGCCTCTCCGAGATTCCACCGGCGCTTGGAAAGCCTCTCTGTTCATCATCGGTATAACGCACTACTTCTTCCTCTGTTCTTCACCGGTGGATCAATTTTTGATTAATTACTAACAAAATTGGAATTTGGGATTGCAGCCATCGAGTTCGGTGAGAGGCTGAGCTATTTTGGGATCGCTTCGAGTTTGATTATATACCTAACCAAGGTGCTTCATCAAGAGCTGAAGACGGCGGCGAGAAGCGTCAATTACTGGGCCGGTGTCACCACTTTGATGCCTCTGCTCGGCGGCTTTCTCGCCGACGCTTACTTCGGCCGCTACGCCACCGTTCTCCTCTCCTCCGTTATCTACGTTTTGGTCGGTTTCATTTTCAATACCCCATTTGATTATTATTATTATTAATACCCAATTTTAAGATGTGAGTGATTGTTGAAACAGGGGTTGACTCTGTTAACCATGTCGGCGTTCGTTCCAAGTTTCAAACCCTGTGGAGGCGATGATCAGGTGTGCCCGGAGGCACGGAAGAGCCATGAGATCATCTTCTTCCTCGCAATTTACATGATCTCCATAGGAACTGGTGGGCACAAGCCATCTCTCGAGAGCTTCGGAGCCGACCAATTCGATGATGATCATTCGGAAGAACGGAAGAAAAAAATGTCTTATTTCAATTGGTGGAATTTCGGGCTCTGTTCTGGCCTCTTGTTTGGCGTTACCATCATTGTTTATATCCAGGATCACTTCGGGTGGGGAACTGCAGATGTCATTCTAACGGCGGTGCTGGTGGTTTCTGTCGTGATTTTTGTCGCCGGCCGCCCGTTTTATCGGTACCGAAAGCCATCTGGAAGCCCCTTGACGCCGTTGTTGCAGGTTGTTGTGGCGGCCATTCGGAAGAGAAAGCTTCCACTCCCTTCCAATCCTTCTTTATTGCATGAATTTCCCAGGACAGCTAATAACGCCGCCCATGGGAGGTTCTTGTGCCACACCCAAAACCTCAAGTAAGCAATCAAATCAAAATATTATTTTTATTTAGTGTCAAAGAGTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACGTTGAGTATAAATTCTCATGGTTTTGCTTTGGGCTTCCCAAAAAGCTTCATAACAATGGAGTTAGTATTCCTCACTTATAAACTCATGATCATTCCCTAAATTAGCGGACCTGGAACTTCCATCGTTCAACAAAGATAACCCACCACACTAATTTAGGAAACCGTCATGAAATTAAAAAAATATTCTTTTCTCGATTGTGGAGAGAGTCATGATTCCTACACGATATAAGAGCTATGCCCTTAACTTAACTGTGTTAATAGAATTCTCTAATGTTGAATAAATAAGAGTCTCGAAGGTATAGTCAAAAGTGACTCATAAAAAAGAGTTTGGAAGCTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATTGTGTACTTTGTTTGAAAAGTCTAGAGAAGGAGTCAAGCCTCGATTAATGGGAAGCTATTCAAGGGTTTGATAGGTCTTAGGGGAGGCTCTATAATTGTACTATGTTCGAGGGAGGGCTCCATAGATCTCAGAGGAGGATGAATACATCTTCATTGGTATGAGACATTTTGAGGAAGCCGAAAAAGATAATATCATATCATTGTGGATAAGTCTGATTTCTGACCCCGAGTAGAAATTAAGTTAAGAAAATTAAACTCCGAATTTGAATGTCCTAAATATTGTGCAATAACAAAATTGTTGATTGGGTAATAGATTTCTAGACAAAGCGGCGGTTTATGAAGACAAGGAGGGATCGGCGGAGAAGCAAAGTCCATGGCGGCTAGCGACGGTGACGAAGGTGGAAGAAATGAAGCTAATATTGAACATGATACCCATTTGGTTGGCGACTCTGCCGTTCGGAGTCACCATAGCTCAAACCTCGACGTTCTTCATAAAACAAGCCGCCAACTTGAACCGGAAGATGGGCGACGGCTTGATCCTCCCGCCGACCACCATCTTCTGCCTGACTGCCATAGGAATGATCGTGTCCCTCACCATTTATGATAAGCTGTTGGTGCCCATGCTCCGACGAGCCACCGGCAACGAGAGA

mRNA sequence

GCAAGTAGAGTCCAAGATACTGGGCGGTTGTTGTCCAGATCCAACTTATTGGGAGAACTGACAACCAAATGTGTGAGATGTCGAAAAGCTTGGAGTGTGAAGCTAATGGCGGCGATGACAAATGGGTTGCTGATTCTTCTCTTGATTACAAAGGGAGGCTGCCTCTCCGAGATTCCACCGGCGCTTGGAAAGCCTCTCTGTTCATCATCGACAAAGCGGCGGTTTATGAAGACAAGGAGGGATCGGCGGAGAAGCAAAGTCCATGGCGGCTAGCGACGGTGACGAAGGTGGAAGAAATGAAGCTAATATTGAACATGATACCCATTTGGTTGGCGACTCTGCCGTTCGGAGTCACCATAGCTCAAACCTCGACGTTCTTCATAAAACAAGCCGCCAACTTGAACCGGAAGATGGGCGACGGCTTGATCCTCCCGCCGACCACCATCTTCTGCCTGACTGCCATAGGAATGATCGTGTCCCTCACCATTTATGATAAGCTGTTGGTGCCCATGCTCCGACGAGCCACCGGCAACGAGAGA

Coding sequence (CDS)

ATGTGTGAGATGTCGAAAAGCTTGGAGTGTGAAGCTAATGGCGGCGATGACAAATGGGTTGCTGATTCTTCTCTTGATTACAAAGGGAGGCTGCCTCTCCGAGATTCCACCGGCGCTTGGAAAGCCTCTCTGTTCATCATCGACAAAGCGGCGGTTTATGAAGACAAGGAGGGATCGGCGGAGAAGCAAAGTCCATGGCGGCTAGCGACGGTGACGAAGGTGGAAGAAATGAAGCTAATATTGAACATGATACCCATTTGGTTGGCGACTCTGCCGTTCGGAGTCACCATAGCTCAAACCTCGACGTTCTTCATAAAACAAGCCGCCAACTTGAACCGGAAGATGGGCGACGGCTTGATCCTCCCGCCGACCACCATCTTCTGCCTGACTGCCATAGGAATGATCGTGTCCCTCACCATTTATGATAAGCTGTTGGTGCCCATGCTCCGACGAGCCACCGGCAACGAGAGA

Protein sequence

MCEMSKSLECEANGGDDKWVADSSLDYKGRLPLRDSTGAWKASLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTFFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER
Homology
[Close]
BLAST of Carg19957 vs. NCBI nr
Match: XP_022950472.1 (protein NRT1/ PTR FAMILY 5.6-like [Cucurbita moschata])

HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 43  SLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 102
           +L  +DKAAVYEDK GSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST
Sbjct: 304 NLKFLDKAAVYEDKGGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 363

Query: 103 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER
Sbjct: 364 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 418


HSP 2 Score: 99.8 bits (247), Expect = 9.0e-18
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0 

Query: 1  MCEMSKSLECEANGGDDKWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          MCEMSKSLECEANGGDDKWVADSSLDYKGRLPLR STGAWKASLFII
Sbjct: 1  MCEMSKSLECEANGGDDKWVADSSLDYKGRLPLRASTGAWKASLFII 47

[Close]
BLAST of Carg19957 vs. NCBI nr
Match: XP_023543405.1 (protein NRT1/ PTR FAMILY 5.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 43  SLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 102
           +L  +DKAAVYEDK GSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST
Sbjct: 304 NLKFLDKAAVYEDKGGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 363

Query: 103 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER
Sbjct: 364 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 418


HSP 2 Score: 97.1 bits (240), Expect = 5.8e-17
Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MCEMSKSLECEANGGDDKWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          MCEMSKSLECEANGGD KWVADSSLDYKGRLPLR STGAWKASLFII
Sbjct: 1  MCEMSKSLECEANGGDHKWVADSSLDYKGRLPLRASTGAWKASLFII 47

[Close]
BLAST of Carg19957 vs. NCBI nr
Match: XP_022978121.1 (protein NRT1/ PTR FAMILY 5.6-like [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 2.8e-51
Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0 

Query: 43  SLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 102
           +L  +DKAAVYEDK GSAE QSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST
Sbjct: 304 NLKFLDKAAVYEDKGGSAEMQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 363

Query: 103 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQAANLNRKMGD LILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRR TGNER
Sbjct: 364 FFIKQAANLNRKMGDSLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRTTGNER 418


HSP 2 Score: 97.1 bits (240), Expect = 5.8e-17
Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MCEMSKSLECEANGGDDKWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          MCEMSKSLECEANGGD KWVADSSLDYKGRLPLR STGAWKASLFII
Sbjct: 1  MCEMSKSLECEANGGDHKWVADSSLDYKGRLPLRASTGAWKASLFII 47

[Close]
BLAST of Carg19957 vs. NCBI nr
Match: XP_023517590.1 (protein NRT1/ PTR FAMILY 5.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46
Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTF 103
           L  +DKAA+YE+    AEK+SPWRLATVTKVEEMKLILNMIPIWLATLPFGV + QTSTF
Sbjct: 316 LKFLDKAAIYEESGAPAEKESPWRLATVTKVEEMKLILNMIPIWLATLPFGVAVGQTSTF 375

Query: 104 FIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FIKQAANLNRK+ DGL LPPTTIFCL A+GMI+SLTIYDKLLVP+LRRATGNER
Sbjct: 376 FIKQAANLNRKISDGLTLPPTTIFCLAAVGMIISLTIYDKLLVPLLRRATGNER 429


HSP 2 Score: 59.7 bits (143), Expect = 1.0e-05
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 19 WVADSSLDYKGRLPLRDSTGAWKASLFII 48
          WVADSS+DYKGR+PLR STGAWKASLFII
Sbjct: 31 WVADSSVDYKGRVPLRASTGAWKASLFII 59

[Close]
BLAST of Carg19957 vs. NCBI nr
Match: XP_022151485.1 (protein NRT1/ PTR FAMILY 5.6-like [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 4.6e-46
Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 0 

Query: 43  SLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 102
           +L  +DKAAV E   G AEKQ+PWRLATVTKVEEMKLILNMIPIWLATLPFG+TIAQTST
Sbjct: 309 NLKFLDKAAVCEGTGGPAEKQNPWRLATVTKVEEMKLILNMIPIWLATLPFGMTIAQTST 368

Query: 103 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQAANLNRK+GDG +LPPTTIFCL A+ M+VSLTIYDKLLVPMLRR TGNER
Sbjct: 369 FFIKQAANLNRKIGDGFLLPPTTIFCLAAVAMLVSLTIYDKLLVPMLRRTTGNER 423


HSP 2 Score: 64.7 bits (156), Expect = 3.2e-07
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 11 EANGG---DDKWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          E NGG   D+KWV DSS+DY+GR+PLR STGAWKASLFII
Sbjct: 15 EINGGGETDEKWVRDSSVDYRGRIPLRASTGAWKASLFII 54

[Close]
BLAST of Carg19957 vs. TAIR10
Match: AT3G53960.1 (Major facilitator superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-33
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 0 

Query: 43  SLFIIDKAAVYEDKEGS--AEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQT 102
           +L  +DKAAV ED+  +  AEKQSPWRLATVTKVEE+KL++NMIPIW  TL FGV   Q+
Sbjct: 301 NLKFLDKAAVIEDRNENTKAEKQSPWRLATVTKVEEVKLLINMIPIWFFTLAFGVCATQS 360

Query: 103 STFFIKQAANLNRKM-GDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           ST FIKQA  ++R + G   I+PP ++F L A+ +I+++TIY+KLLVP+LRRATGNER
Sbjct: 361 STLFIKQAIIMDRHITGTSFIVPPASLFSLIALSIIITVTIYEKLLVPLLRRATGNER 418

[Close]
BLAST of Carg19957 vs. TAIR10
Match: AT2G37900.1 (Major facilitator superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 4.6e-32
Identity = 68/115 (59.13%), Postives = 88/115 (76.52%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGSA-EKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 103
           L  +DKAA+ EDK   A EKQSPWRL T+TKVEE KLI+N+IPIW +TL FG+   Q ST
Sbjct: 303 LKFLDKAAIIEDKNPLALEKQSPWRLLTLTKVEETKLIINVIPIWFSTLAFGICATQAST 362

Query: 104 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQA  ++R +G G  +PP ++F LTA+ +I+SLT+Y+KLLVP+LR  T N+R
Sbjct: 363 FFIKQAITMDRHIG-GFTVPPASMFTLTALTLIISLTVYEKLLVPLLRSITRNQR 416


HSP 2 Score: 52.0 bits (123), Expect = 3.9e-07
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 18 KWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          KWV DSSLD +GR+PLR  TGAW+A+LFII
Sbjct: 20 KWVLDSSLDSRGRVPLRARTGAWRAALFII 49

[Close]
BLAST of Carg19957 vs. TAIR10
Match: AT3G54450.1 (Major facilitator superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 39/109 (35.78%), Postives = 75/109 (68.81%), Query Frame = 0 

Query: 47  IDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTFFIK 106
           +DKA + ++ + + + ++PWRL TV +VEE+KLIL +IPIW++ + F  T+ Q +TFF+K
Sbjct: 275 LDKATIIDEIDHN-KNRNPWRLCTVNQVEEVKLILRLIPIWISLIMFCATLTQLNTFFLK 334

Query: 107 QAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGN 156
           Q + ++R +G+   +PP     +  + +++ + +YD++ VPM+R+ T +
Sbjct: 335 QGSMMDRTIGNHFTIPPAAFQSIVGVTILILIPLYDRVFVPMVRKITNH 382

[Close]
BLAST of Carg19957 vs. TAIR10
Match: AT5G46040.1 (Major facilitator superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-17
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0 

Query: 42  ASLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTS 101
           +SL  +++A++   K GS  K   WRL T+T+VEE K +L M+P+   T    + +AQ  
Sbjct: 297 SSLRFLNRASL---KTGSTHK---WRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIM 356

Query: 102 TFFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           T FIKQ   L+R++ +   +PP ++   T   M+VS+ IYD++ V  +R+ TGN R
Sbjct: 357 TLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPR 406

[Close]
BLAST of Carg19957 vs. TAIR10
Match: AT2G02040.1 (peptide transporter 2)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17
Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 0 

Query: 47  IDKAAVYEDKEG-SAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTFFI 106
           +DKAAV  ++E  S +  + WRL TVT+VEE+K+++ M PIW + + F    AQ ST F+
Sbjct: 313 LDKAAVISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFV 372

Query: 107 KQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           +Q   +N K+G    LPP  +       +I+ + +YD+ +VP+ R+ TG ++
Sbjct: 373 QQGRAMNCKIG-SFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDK 423

[Close]
BLAST of Carg19957 vs. Swiss-Prot
Match: sp|Q9M331|PTR45_ARATH (Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-32
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 0 

Query: 43  SLFIIDKAAVYEDKEGS--AEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQT 102
           +L  +DKAAV ED+  +  AEKQSPWRLATVTKVEE+KL++NMIPIW  TL FGV   Q+
Sbjct: 301 NLKFLDKAAVIEDRNENTKAEKQSPWRLATVTKVEEVKLLINMIPIWFFTLAFGVCATQS 360

Query: 103 STFFIKQAANLNRKM-GDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           ST FIKQA  ++R + G   I+PP ++F L A+ +I+++TIY+KLLVP+LRRATGNER
Sbjct: 361 STLFIKQAIIMDRHITGTSFIVPPASLFSLIALSIIITVTIYEKLLVPLLRRATGNER 418

[Close]
BLAST of Carg19957 vs. Swiss-Prot
Match: sp|P0CI03|PTR28_ARATH (Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.3e-31
Identity = 68/115 (59.13%), Postives = 88/115 (76.52%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGSA-EKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 103
           L  +DKAA+ EDK   A EKQSPWRL T+TKVEE KLI+N+IPIW +TL FG+   Q ST
Sbjct: 303 LKFLDKAAIIEDKNPLALEKQSPWRLLTLTKVEETKLIINVIPIWFSTLAFGICATQAST 362

Query: 104 FFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQA  ++R +G G  +PP ++F LTA+ +I+SLT+Y+KLLVP+LR  T N+R
Sbjct: 363 FFIKQAITMDRHIG-GFTVPPASMFTLTALTLIISLTVYEKLLVPLLRSITRNQR 416


HSP 2 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 18 KWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          KWV DSSLD +GR+PLR  TGAW+A+LFII
Sbjct: 20 KWVLDSSLDSRGRVPLRARTGAWRAALFII 49

[Close]
BLAST of Carg19957 vs. Swiss-Prot
Match: sp|Q9M1I2|PTR46_ARATH (Protein NRT1/ PTR FAMILY 5.4 OS=Arabidopsis thaliana OX=3702 GN=NPF5.4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18
Identity = 39/109 (35.78%), Postives = 75/109 (68.81%), Query Frame = 0 

Query: 47  IDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTFFIK 106
           +DKA + ++ + + + ++PWRL TV +VEE+KLIL +IPIW++ + F  T+ Q +TFF+K
Sbjct: 275 LDKATIIDEIDHN-KNRNPWRLCTVNQVEEVKLILRLIPIWISLIMFCATLTQLNTFFLK 334

Query: 107 QAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGN 156
           Q + ++R +G+   +PP     +  + +++ + +YD++ VPM+R+ T +
Sbjct: 335 QGSMMDRTIGNHFTIPPAAFQSIVGVTILILIPLYDRVFVPMVRKITNH 382

[Close]
BLAST of Carg19957 vs. Swiss-Prot
Match: sp|Q9FNL8|PTR4_ARATH (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-16
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0 

Query: 42  ASLFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTS 101
           +SL  +++A++   K GS  K   WRL T+T+VEE K +L M+P+   T    + +AQ  
Sbjct: 297 SSLRFLNRASL---KTGSTHK---WRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIM 356

Query: 102 TFFIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           T FIKQ   L+R++ +   +PP ++   T   M+VS+ IYD++ V  +R+ TGN R
Sbjct: 357 TLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPR 406

[Close]
BLAST of Carg19957 vs. Swiss-Prot
Match: sp|P46032|PTR2_ARATH (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.5e-16
Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 0 

Query: 47  IDKAAVYEDKEG-SAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTFFI 106
           +DKAAV  ++E  S +  + WRL TVT+VEE+K+++ M PIW + + F    AQ ST F+
Sbjct: 313 LDKAAVISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFV 372

Query: 107 KQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           +Q   +N K+G    LPP  +       +I+ + +YD+ +VP+ R+ TG ++
Sbjct: 373 QQGRAMNCKIG-SFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDK 423

[Close]
BLAST of Carg19957 vs. TrEMBL
Match: tr|A0A0A0KXC6|A0A0A0KXC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303040 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.0e-46
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGS-AEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 103
           L  +DKAAVYE+  G  AEKQSPWRLATVTKVEEMKLILNMIPIWL+TLPFGVTIAQTST
Sbjct: 312 LKFLDKAAVYEENNGGPAEKQSPWRLATVTKVEEMKLILNMIPIWLSTLPFGVTIAQTST 371

Query: 104 FFIKQAANLNRKMGD-GLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQA+N+NRK+GD GLILPPTTIFCL AIGMIVS+TIYDK+LVPMLRR TGNER
Sbjct: 372 FFIKQASNMNRKIGDGGLILPPTTIFCLAAIGMIVSITIYDKVLVPMLRRTTGNER 427


HSP 2 Score: 59.7 bits (143), Expect = 6.8e-06
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 19 WVADSSLDYKGRLPLRDSTGAWKASLFII 48
          WVADSS+DYKGR+PLR STGAWKASLFII
Sbjct: 27 WVADSSVDYKGRVPLRASTGAWKASLFII 55

[Close]
BLAST of Carg19957 vs. TrEMBL
Match: tr|A0A1S3BJN5|A0A1S3BJN5_CUCME (protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo OX=3656 GN=LOC103490633 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.2e-46
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGS-AEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTST 103
           L  +DKAA+YE+  G  AEKQSPWRLATVTKVEEMKLILNMIPIWL+TLPFGVTIAQTST
Sbjct: 310 LKFLDKAAIYEENNGGPAEKQSPWRLATVTKVEEMKLILNMIPIWLSTLPFGVTIAQTST 369

Query: 104 FFIKQAANLNRKMGD-GLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FFIKQA+N+NRK+GD GLILPPTTIFCL AIGMIVS+TIYDK+LVPMLRR TGNER
Sbjct: 370 FFIKQASNMNRKIGDGGLILPPTTIFCLAAIGMIVSITIYDKVLVPMLRRTTGNER 425


HSP 2 Score: 61.6 bits (148), Expect = 1.8e-06
Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 17 DKWVADSSLDYKGRLPLRDSTGAWKASLFIIDKAAVYEDKEGSAEKQSPWRLAT-----V 76
          +KWVADSS+DYKGR+PLR STGAWKASLFII             E+ S + +AT     +
Sbjct: 23 EKWVADSSVDYKGRVPLRASTGAWKASLFIIAME--------FGERLSYFGIATSLIIYL 82

Query: 77 TKV--EEMKLILNMIPIW 88
          TKV  EE+K     +  W
Sbjct: 83 TKVLHEELKTAARSVNYW 92

[Close]
BLAST of Carg19957 vs. TrEMBL
Match: tr|A0A2C9VEI3|A0A2C9VEI3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G078700 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-39
Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTF 103
           L  +DKAA+ ED E +AEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFG+ +AQ +TF
Sbjct: 299 LKFLDKAAILEDTENAAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGICVAQAATF 358

Query: 104 FIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FIKQ   +NR++ +G ++PP +I+ LTAIGMI S+TIY+K+LVP+LRR TGNER
Sbjct: 359 FIKQCTTMNREISNGFLIPPASIYALTAIGMIFSVTIYEKVLVPILRRVTGNER 412


HSP 2 Score: 57.8 bits (138), Expect = 2.6e-05
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 16 DDKWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          +DKWV DSS+D+KGR+PLR STG WK SLFII
Sbjct: 14 EDKWVYDSSVDHKGRVPLRSSTGVWKGSLFII 45

[Close]
BLAST of Carg19957 vs. TrEMBL
Match: tr|A0A2I4DZA8|A0A2I4DZA8_9ROSI (protein NRT1/ PTR FAMILY 5.6-like OS=Juglans regia OX=51240 GN=LOC108984860 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTF 103
           L  +DKAAV ED +  AEKQSPW+LATVTKVEE+KL+LNMIPIWLATLPFG+ IAQ +TF
Sbjct: 304 LKFLDKAAVLEDNDNPAEKQSPWKLATVTKVEELKLVLNMIPIWLATLPFGICIAQGTTF 363

Query: 104 FIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FIKQ A LNRK+G+G  LPP +I+ + AIGMI+S+TIY+K+LVP +R+ATGNER
Sbjct: 364 FIKQGAILNRKIGNGFELPPASIYAVAAIGMIISVTIYEKILVPTIRKATGNER 417

[Close]
BLAST of Carg19957 vs. TrEMBL
Match: tr|A0A1Q3BBM5|A0A1Q3BBM5_CEPFO (PTR2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_08962 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 0 

Query: 44  LFIIDKAAVYEDKEGSAEKQSPWRLATVTKVEEMKLILNMIPIWLATLPFGVTIAQTSTF 103
           L  +DKAA+ ED+  S EKQSPWRLATVTKVEEMKL+LN+IPIWLATLPFGV +AQ STF
Sbjct: 299 LKFLDKAAIIEDEGNSDEKQSPWRLATVTKVEEMKLLLNIIPIWLATLPFGVCVAQASTF 358

Query: 104 FIKQAANLNRKMGDGLILPPTTIFCLTAIGMIVSLTIYDKLLVPMLRRATGNER 158
           FIKQ   LNRK+ D  ++PP +++ L AIGMI+S+T+Y+K+LVP+LRRATGNER
Sbjct: 359 FIKQGTTLNRKIVDDFLIPPASVYSLAAIGMIISVTVYEKILVPLLRRATGNER 412


HSP 2 Score: 57.8 bits (138), Expect = 2.6e-05
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 11 EANGGDD-KWVADSSLDYKGRLPLRDSTGAWKASLFII 48
          EA   DD KWV DSS+DYKGR+P R STG WKASLFII
Sbjct: 8  EARDADDKKWVYDSSVDYKGRVPHRASTGVWKASLFII 45

The following BLAST results are available for this feature:
BLAST of Carg19957 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950472.13.9e-5395.65protein NRT1/ PTR FAMILY 5.6-like [Cucurbita moschata][more]
XP_023543405.13.9e-5395.65protein NRT1/ PTR FAMILY 5.6-like [Cucurbita pepo subsp. pepo][more]
XP_022978121.12.8e-5193.04protein NRT1/ PTR FAMILY 5.6-like [Cucurbita maxima][more]
XP_023517590.13.5e-4682.46protein NRT1/ PTR FAMILY 5.6-like [Cucurbita pepo subsp. pepo][more]
XP_022151485.14.6e-4683.48protein NRT1/ PTR FAMILY 5.6-like [Momordica charantia][more]
BLAST of Carg19957 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53960.11.1e-3361.02Major facilitator superfamily protein[more]
AT2G37900.14.6e-3259.13Major facilitator superfamily protein[more]
AT3G54450.11.5e-1935.78Major facilitator superfamily protein[more]
AT5G46040.13.2e-1737.93Major facilitator superfamily protein[more]
AT2G02040.14.2e-1737.50peptide transporter 2[more]
BLAST of Carg19957 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M331|PTR45_ARATH2.0e-3261.02Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2[more]
sp|P0CI03|PTR28_ARATH8.3e-3159.13Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1[more]
sp|Q9M1I2|PTR46_ARATH2.8e-1835.78Protein NRT1/ PTR FAMILY 5.4 OS=Arabidopsis thaliana OX=3702 GN=NPF5.4 PE=2 SV=1[more]
sp|Q9FNL8|PTR4_ARATH5.7e-1637.93Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1[more]
sp|P46032|PTR2_ARATH7.5e-1637.50Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1[more]
BLAST of Carg19957 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KXC6|A0A0A0KXC6_CUCSA4.0e-4685.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303040 PE=4 SV=1[more]
tr|A0A1S3BJN5|A0A1S3BJN5_CUCME5.2e-4684.48protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo OX=3656 GN=LOC103490633 PE=4 SV=1[more]
tr|A0A2C9VEI3|A0A2C9VEI3_MANES2.7e-3970.18Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G078700 PE=4 SV=... [more]
tr|A0A2I4DZA8|A0A2I4DZA8_9ROSI1.8e-3870.18protein NRT1/ PTR FAMILY 5.6-like OS=Juglans regia OX=51240 GN=LOC108984860 PE=4... [more]
tr|A0A1Q3BBM5|A0A1Q3BBM5_CEPFO1.8e-3869.30PTR2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_089... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19957-RACarg19957-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 47..157
e-value: 7.8E-25
score: 88.9
NoneNo IPR availablePANTHERPTHR11654:SF293PROTEIN NRT1/ PTR FAMILY 5.6-RELATEDcoord: 47..157
coord: 15..47
IPR000109Proton-dependent oligopeptide transporter familyPFAMPF00854PTR2coord: 53..153
e-value: 1.9E-16
score: 59.8
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 47..157
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 15..47

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19957Cla97C10G204810Watermelon (97103) v2carwmbB0581
Carg19957Cla97C04G074380Watermelon (97103) v2carwmbB0583
Carg19957Bhi11G001617Wax gourdcarwgoB0664
Carg19957Bhi03G001612Wax gourdcarwgoB0666
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19957Carg13239Silver-seed gourdcarcarB514
Carg19957Carg12513Silver-seed gourdcarcarB517
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19957Silver-seed gourdcarcarB098
Carg19957Silver-seed gourdcarcarB195
Carg19957Cucumber (Gy14) v2carcgybB0561
Carg19957Cucumber (Gy14) v1carcgyB0632
Carg19957Cucumber (Gy14) v1carcgyB0635
Carg19957Cucurbita maxima (Rimu)carcmaB0777
Carg19957Cucurbita maxima (Rimu)carcmaB0773
Carg19957Cucurbita maxima (Rimu)carcmaB0775
Carg19957Cucurbita maxima (Rimu)carcmaB0778
Carg19957Cucurbita moschata (Rifu)carcmoB0751
Carg19957Cucurbita moschata (Rifu)carcmoB0753
Carg19957Cucurbita moschata (Rifu)carcmoB0755
Carg19957Cucurbita moschata (Rifu)carcmoB0756
Carg19957Cucurbita moschata (Rifu)carcmoB0757
Carg19957Cucurbita pepo (Zucchini)carcpeB0785
Carg19957Cucurbita pepo (Zucchini)carcpeB0787
Carg19957Cucurbita pepo (Zucchini)carcpeB0790
Carg19957Cucurbita pepo (Zucchini)carcpeB0791
Carg19957Cucurbita pepo (Zucchini)carcpeB0792
Carg19957Wild cucumber (PI 183967)carcpiB0591
Carg19957Cucumber (Chinese Long) v2carcuB0584
Carg19957Cucumber (Chinese Long) v2carcuB0585
Carg19957Cucumber (Chinese Long) v3carcucB0591
Carg19957Cucumber (Chinese Long) v3carcucB0592
Carg19957Bottle gourd (USVL1VR-Ls)carlsiB503
Carg19957Bottle gourd (USVL1VR-Ls)carlsiB504
Carg19957Melon (DHL92) v3.5.1carmeB0560
Carg19957Melon (DHL92) v3.5.1carmeB0561
Carg19957Melon (DHL92) v3.6.1carmedB0566
Carg19957Melon (DHL92) v3.6.1carmedB0567
Carg19957Watermelon (Charleston Gray)carwcgB0540
Carg19957Watermelon (Charleston Gray)carwcgB0542
Carg19957Watermelon (Charleston Gray)carwcgB0543
Carg19957Watermelon (97103) v1carwmB0553
Carg19957Watermelon (97103) v1carwmB0554