Carg19893 (gene) Silver-seed gourd

NameCarg19893
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_108 : 137336 .. 137839 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCACCGCCGGTCGTCCAAAAACCTACTCAACACGACTTCGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCGGCGGGTTGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAGGAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCGGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGATAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA

mRNA sequence

ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCACCGCCGGTCGTCCAAAAACCTACTCAACACGACTTCGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCGGCGGGTTGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAGGAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCGGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGATAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA

Coding sequence (CDS)

ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCACCGCCGGTCGTCCAAAAACCTACTCAACACGACTTCGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCGGCGGGTTGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAGGAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCGGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGATAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA

Protein sequence

MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
BLAST of Carg19893 vs. NCBI nr
Match: XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata])

HSP 1 Score: 299.3 bits (765), Expect = 8.2e-78
Identity = 147/167 (88.02%), Postives = 148/167 (88.62%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFSNXXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQQNVGE 60
           MEDQQVLQNLDSLWFFATVFSN          KPTQHDFVEPPGGEIATPIFQNQQNVGE
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSN--RTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGE 60

Query: 61  ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEICECWLL 120
           ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEICECWLL
Sbjct: 61  ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEICECWLL 120

Query: 121 EQRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
           EQRIGGGNQY+R         MPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 EQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

BLAST of Carg19893 vs. NCBI nr
Match: XP_023000977.1 (uncharacterized protein LOC111495257 [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-71
Identity = 145/172 (84.30%), Postives = 151/172 (87.79%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFSN-----XXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSN     XXXXXXX   KPT++DFVE PGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAXXXXXXXVVQKPTENDFVELPGGEIATPIFQNQ 60

Query: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120
           QNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL QRR+IVGEMDLSDAVKEIC
Sbjct: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
           ECWLLEQRIGGGNQY+R         +PPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 172

BLAST of Carg19893 vs. NCBI nr
Match: XP_023520136.1 (uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-71
Identity = 149/172 (86.63%), Postives = 152/172 (88.37%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVF-----SNXXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVF       XXXXXXXXXX   Q+DFVEPPGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFXXXXXXXXXXXXXXXXXXXXQNDFVEPPGGEIATPIFQNQ 60

Query: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120
           QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC
Sbjct: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
           ECWLLEQRIGGGNQY+R         MPPFEDSMAMKEHIRSWA+AVAC VR
Sbjct: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKMPPFEDSMAMKEHIRSWAFAVACIVR 172

BLAST of Carg19893 vs. NCBI nr
Match: XP_008443476.1 (PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 5.6e-34
Identity = 90/170 (52.94%), Postives = 105/170 (61.76%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFSNXXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQQN-VG 60
           ME QQV +N DSLWFF+TVFSN          KP Q+DFVEP G EIATPI +N++N VG
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSN---RTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVG 60

Query: 61  EERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRKIVGEMDLSDAVKEICECW 120
           EE+ +                        GRR WG   +R+ +VGE+DLS AVKEICECW
Sbjct: 61  EEKEM-----------XXXXXXXXXXXXXGRRSWGLEQRRKFVVGEIDLSYAVKEICECW 120

Query: 121 LLE-QRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
             E  RIGGG + ++         MP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 SFEVMRIGGGKKTKK---------MPSFEDSMAMKEHIRSWAYAVACTVR 147

BLAST of Carg19893 vs. NCBI nr
Match: XP_011657601.1 (PREDICTED: uncharacterized protein LOC101209234 [Cucumis sativus] >KGN65609.1 hypothetical protein Csa_1G470250 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 9.5e-34
Identity = 90/168 (53.57%), Postives = 103/168 (61.31%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFSNXXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQQNVGE 60
           ME QQVL+N DSLWFFATVFSN          KP Q+DFV   G EIATPI +N     E
Sbjct: 1   MEGQQVLENFDSLWFFATVFSN---RTPPVVGKPIQNDFVGSLGEEIATPITRN-----E 60

Query: 61  ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEICECWLL 120
           E N+ + K  ET                GR WG   +++ IVGE+DLS AVKEICECW  
Sbjct: 61  ENNVCEAKEMET----XXXXXXXXXXXGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSF 120

Query: 121 EQ-RIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
           E+ RIGGG + ++         MP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 EEMRIGGGEKTKK---------MPSFEDSMAMKEHIRSWAYAVACTVR 147

BLAST of Carg19893 vs. TrEMBL
Match: tr|A0A1S3B8X4|A0A1S3B8X4_CUCME (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34
Identity = 90/170 (52.94%), Postives = 105/170 (61.76%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFSNXXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQQN-VG 60
           ME QQV +N DSLWFF+TVFSN          KP Q+DFVEP G EIATPI +N++N VG
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSN---RTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVG 60

Query: 61  EERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRKIVGEMDLSDAVKEICECW 120
           EE+ +                        GRR WG   +R+ +VGE+DLS AVKEICECW
Sbjct: 61  EEKEM-----------XXXXXXXXXXXXXGRRSWGLEQRRKFVVGEIDLSYAVKEICECW 120

Query: 121 LLE-QRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
             E  RIGGG + ++         MP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 SFEVMRIGGGKKTKK---------MPSFEDSMAMKEHIRSWAYAVACTVR 147

BLAST of Carg19893 vs. TrEMBL
Match: tr|A0A0A0LX63|A0A0A0LX63_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.3e-34
Identity = 90/168 (53.57%), Postives = 103/168 (61.31%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFSNXXXXXXXXXXKPTQHDFVEPPGGEIATPIFQNQQNVGE 60
           ME QQVL+N DSLWFFATVFSN          KP Q+DFV   G EIATPI +N     E
Sbjct: 1   MEGQQVLENFDSLWFFATVFSN---RTPPVVGKPIQNDFVGSLGEEIATPITRN-----E 60

Query: 61  ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEICECWLL 120
           E N+ + K  ET                GR WG   +++ IVGE+DLS AVKEICECW  
Sbjct: 61  ENNVCEAKEMET----XXXXXXXXXXXGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSF 120

Query: 121 EQ-RIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIRSWAYAVACTVR 168
           E+ RIGGG + ++         MP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 EEMRIGGGEKTKK---------MPSFEDSMAMKEHIRSWAYAVACTVR 147

BLAST of Carg19893 vs. TrEMBL
Match: tr|A5BYR7|A5BYR7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_029934 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14
Identity = 63/196 (32.14%), Postives = 85/196 (43.37%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFS-NXXXXXXXXXXKPTQHDFVEPPGGEIATP---IFQNQQ 60
           MED    + LDSLWFF+ V S            K TQ      P  E   P   I QNQ+
Sbjct: 22  MEDSGFTEKLDSLWFFSNVLSLRSQSMSSATDEKATQISLHHSPKSEATKPLSIIAQNQK 81

Query: 61  NVGEERNIVDEKTNETGGGLGLI-----------------ITEERRKSRGRRWGCLGQRR 120
           N  E   ++ ++      G   +                 + EE+R+S+     CL QRR
Sbjct: 82  NQTENAEVLVQQRRCLNCGEFAVETEDQIAKTEVLEVLPPVKEEKRRSKRSFKSCLNQRR 141

Query: 121 KIVGEMDLSDA--------VKEICECWLLEQRIGGGNQYRRXXXXXXXXXMPPFEDSMAM 168
           +++GE DL           V  +C  W++E+  G      +         MPP  D MAM
Sbjct: 142 RVLGESDLQVKGLGDMGFDVNVVCGNWVVEEASG-----YQWFGSPHHVKMPPLSDGMAM 201

BLAST of Carg19893 vs. TrEMBL
Match: tr|A0A2N9ISS2|A0A2N9ISS2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56389 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 66/192 (34.38%), Postives = 92/192 (47.92%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFS---NXXXXXXXXXXKPTQHDFVEPPGGEIATPI---FQN 60
           M+  +V+++LDSLWFF  + S   N           P +H   E    E++ PI    Q 
Sbjct: 1   MDVSRVIESLDSLWFFTNIISSRNNSLESTSSDGITPQKH-VNESSKEELSEPISPNLQK 60

Query: 61  QQNV--------------GE-----ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL 120
           Q NV              G+     E  +V    NE          +ERRK+R R    L
Sbjct: 61  QLNVLPNAENLVPMCPKCGDFEAEMEPQMVKLAENEALEFQMSAEKQERRKTRRRSKRSL 120

Query: 121 GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHI 168
             RRKI+GE+DL   V+E+   W+ ++  G    Y R         MPPF D++AMKEH+
Sbjct: 121 NPRRKIIGELDLGLDVEELSRIWMFKETCG----YER-FGDEDRNKMPPFNDNVAMKEHL 180

BLAST of Carg19893 vs. TrEMBL
Match: tr|A0A2P4LD54|A0A2P4LD54_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_54722 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 60/191 (31.41%), Postives = 87/191 (45.55%), Query Frame = 0

Query: 1   MEDQQVLQNLDSLWFFATVFS--NXXXXXXXXXXKPTQH---DFVEPPGGEIATPIFQ-- 60
           M+   V+++LDSLWFF  +F+  N             +H   +  +    E  +PI Q  
Sbjct: 1   MDGPWVIESLDSLWFFTNIFAPKNKSLDSASDGIDTQEHVNDESSKEESSEPISPILQHH 60

Query: 61  -----NQQNVGEERNIVDEKTNETGGGLGLII------------TEERRKSRGRRWGCLG 120
                N +N+        E  +E    +   +             EERRK+R R    L 
Sbjct: 61  PDELPNDENLDPMCTKCGEFADEIEPQMANHVEDEVIELKMSAEKEERRKTRRRSKRGLS 120

Query: 121 QRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRXXXXXXXXXMPPFEDSMAMKEHIR 168
            RRKI+GE+DL   V+E+    + ++  G  NQ            MP F D++AMKEH++
Sbjct: 121 HRRKILGELDLCLDVEEVSMFSMFKETCGYRNQ-SFGDQHRNKNLMPSFNDNVAMKEHLK 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022927166.18.2e-7888.02uncharacterized protein LOC111434099 [Cucurbita moschata][more]
XP_023000977.11.5e-7184.30uncharacterized protein LOC111495257 [Cucurbita maxima][more]
XP_023520136.11.5e-7186.63uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo][more]
XP_008443476.15.6e-3452.94PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo][more]
XP_011657601.19.5e-3453.57PREDICTED: uncharacterized protein LOC101209234 [Cucumis sativus] >KGN65609.1 hy... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3B8X4|A0A1S3B8X4_CUCME3.7e-3452.94uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=... [more]
tr|A0A0A0LX63|A0A0A0LX63_CUCSA6.3e-3453.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1[more]
tr|A5BYR7|A5BYR7_VITVI1.1e-1432.14Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_029934 PE=4 SV=1[more]
tr|A0A2N9ISS2|A0A2N9ISS2_FAGSY2.5e-1434.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56389 PE=4 SV=1[more]
tr|A0A2P4LD54|A0A2P4LD54_QUESU3.4e-1131.41Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_54722 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19893-RACarg19893-RAmRNA


The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19893Carg14570Silver-seed gourdcarcarB177