Carg19842 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19842
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin efflux carrier component
Location	Cucurbita_argyrosperma_scaffold_067 : 494336 .. 497932 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAATGCTACCCTTCTCTCTTTACTAGCTCTGTAAATTTCACCATTATCATCACCAGCAAACCGCCGTCGTCGCCATGATCGCCGGCAAGGATGTTGTCGAGATACTCTGCGCAATCATCCCTATGTACTTTCCGCTAGCAATCGCCTACATTACTGTCCGGTGGCTCAAACTCTTCACCGCCGAGCAATCAGCCGGAATCAACCGCTTCGTCAGAACCCTAGCCATTCCATTCCTCGCCTTCAAAGTAATCTCATCAAACAACCTCCTCGCCATCCATCTCAGACTCTTCGCCGCGGATTCGCTTCAGAAGCTCATCTCCCTCGTCGCTCTGTTCCTCTGGAAAATCCTCTGCAAAAACGCCTCTCTCGAATGGATGATCACTGTGTTCTCTCTGTCCTCGCTTCCGAATACACTCATCATCGGCCTTCCGATGACGACGGCGATGTACGGCCAAGAATCCGCTAGTTTCATGATTCAGACTTTGATTTTTCAGAACGCGATTTGGATCAATGTGTTGATTGTTCTGTTCGAGTATAGAGCTGCGAGGATATTTGTCGAGGCGGAGAGATTGAATTTGTCAGTGGCGAAGGGTCGGAGGCCTGGCGGAGAGTGTGGTTTGGTGGATATGAGCGGATTGAAGCAGATTTTTCCGGAGAAAACAGAGGTTAATGTTATATCTGTTGATCGTGACGGTGAAATTGTCTCTGAAGGTAATTGTAATGGAGGATCTCCGCCGAAAGAGATACGTCCGGCTGACGGTGGTGGTGGTTCTGGACATGTAGGGCTGATTTTGGAGCCTGAGAAGGAAGTTGATCTCCCATCGGAGGATACCTCGTCTTCCACAGGTATTTAATATGGCCTTTTCCCCTATTTGCTTAGTTTAAACCCTCTTTTCACGTCCTTATAAAAAATGGCTTACTCTTCTCTCTCTTAGATCTCACAATTTGTCTTTTATTCGGTCCAATATTGTTTTCTCTCTAATTCTTTCCTTGAATTTTTAAAACCTCTTTTTCACATTTTTATAAAAAAATATTTTGTTCTCAATCTCACATTTCACTCATTTTCGAGTCTAATATCTTTGCTGGCACACTAACTCGTGTCCACCCCTTCGAGACTGATCCTCTGGTACATCGTTGCTCTATATCATTTGTAACGCTCCAAGCTCATCCACTAGTAGATATTATCTTTTTTGGACTTTCTCTTTTTAGCTCTTTTTCCAAAGTTTTTAACACGTATCTCCTCCACCCCTTCGAGATTCATTTGTAAAGCTCGATTTTGCTAGAGTTGGATGTTTGTCCTCTTTGAGTTTTGCTAGAGTTTTTGGACTTTCTCTTTAGGTATTGCTAAAGTTAGATGTTTGTCCTCATGACCGCATGACAGAAATCCCGGTCTTGCTTGTTCAGTCGTCCATGGTTGCATGCCCGTTCCAAACCCCTTTTACATGCTTTCTTCCTTGATAGGTCTTTATCATTCCATATTAAGTCAGTATGAGGGTACATGTATAACTGTTCACCAAAATCGTATCTACACTTGCAAGTAACCTGATACCGGCGTGGAATCTTACCATTTATGTTTAATTGGGCAGAAAGGAGTGGAATGACAAAGCTTATAGCATTTAGGTTGGGAAAGAAGATTACACGAGATCCCATAACTTATTCCAGCTTAATCGGCATCATTTGGTCTCTCATATCATTCAAGTATATTCCTTTTTCCCTTTATTTTCATTACTTTTAACCCTTTCCTTCCCAAATTTTTTAATTACATAAATAAATCATTTACCATATCATCTTTTTCTTATAAAATTGTATTATATAATAGTTTTATCAAATATTCAATAAAAAAAATAAAACTGTTACAAACCCATCTCAAAAGTGTAGTGTTTGTGAATTTATTTATTTTCAAACCTATTTACTATCCAATTTAAATATATATTTTGAAAATTTATCTTGGTTAAAAATGATTTTTAATAGTGGTTTGAGAATAAAAAATAAAAAATAATGAATTAAAATAAATATATATGTACCGATAGGTTGGAGGATTGAATTTTTTTGAACTTCTTAAATCAACGAAACCCTAAATTTGTTGGTTTTAAAATGGGCATGAATATAAATGCAATGCAGGGAAGGCATAAAAATGCCAACAGTGTTGCAAAGATGTGTATTAATGTTTGCAGACACAGGCCAGGCGCTGGCCATGTTCAGCTTGGGCATTTTCATGGCCGCACAGCCTACCATCATCGATTGTTCCATGTCCGAGGTTGCCATTGCCATGCTCGTTCGATTTCTCATCAGTCCTATGCTCAGCGCCGCCACATCTAAGCTGGTGGGTCTTCGCGGGATTGTATTGCATACTGCTATTATTCAGGTTCTATTTTACTCTCTAAACTTTTCCATAGTTATTTTTTTATAATATTTATTATTTTCAATTGATTGATTTATTATTATTATTATTATTATATTATATATATATTTTTTTTGTTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTTGTATTTGCTAAGCAATACAATGTTTACCCAAACGTAATGAGTACTTCGTAAGTATTCTTTTCATTAAAAAGAAAATTCTTCCTATATTTGGTAGAATTTTTCATTTAAATGCATTATATTAATTAAAAAATTAGGTTATAGATGGTTAGACAAACACGACTTTCTACAATGGTTTAATAGGCTCCACTTTGAACATAAGCTTTCATGATTTTGCTCTGGGTTTACCCAAAAGGGCTCATACGTGGGACTTTCACCAACACCTCTTCTCGAACAAAGTACGCCTCTCCTATTAATCGAGGCTCGGCTCCTTTTTTTTTTTTTTTTTTTTTTTATTTAAACCTCCAATATTTAAACCCAATATTTTATTTCCTTTAATATTCTAAAAATTTTAATTTTGAATTTTTGTGTTCATATTATTAGAATATTTACTTTGTGTTTGTTGTTTGTGTTAGGGTGGTTGTTGGAATGTTGATTGCCTTCCCAATAATTCTATGTTATTATCTGCTTCTGGGGGTCGTTTTTAAATAAAGCAAACTGGAAGACCTGAAGAGTAAAAAGTGAAAAGTTCAGGGGCACCATGTAAAAACCACCTTCAACAATTTTTATGTAGGAGGTTGTAAATTCTAGTGTACTTTGTGAACAATATTTTCAATATCGACCGTAGCTTACCGAGTATCATTTGGGGTTTGATCTATTTTGAGCGGATTTAATTCTACAGTGTCACCTTTTTGTATCTGTCTCACTTACTATCGAAGCACGAGTGAATCATAGGGATCATAATTAACTTCCAACCTCAATCATGGATTTAAGAGCGTTTAATCCAAATTGTTATCATGTCTATGTAAAGGACGAACATGTCATTATTTTTACTAACCATCATTGTAAGTTACAAAAACGAGACATGCTTGTGAACTTGCATAAGTTGAAGCTGTCATGAATTGTTTTTGTTCTAAACTTTAACTATCATCATAATCGTAGTTCGAACGTTTTGACTAACTTTCTCTATCTAATAAACTTCATCTCATTCCATATAGGAAACTTACGACAAGCTCTGGCTGTCGGATTTACAAATTTTTTTGTA

mRNA sequence

CACAAATGCTACCCTTCTCTCTTTACTAGCTCTGTAAATTTCACCATTATCATCACCAGCAAACCGCCGTCGTCGCCATGATCGCCGGCAAGGATGTTGTCGAGATACTCTGCGCAATCATCCCTATGTACTTTCCGCTAGCAATCGCCTACATTACTGTCCGGTGGCTCAAACTCTTCACCGCCGAGCAATCAGCCGGAATCAACCGCTTCGTCAGAACCCTAGCCATTCCATTCCTCGCCTTCAAAGTAATCTCATCAAACAACCTCCTCGCCATCCATCTCAGACTCTTCGCCGCGGATTCGCTTCAGAAGCTCATCTCCCTCGTCGCTCTGTTCCTCTGGAAAATCCTCTGCAAAAACGCCTCTCTCGAATGGATGATCACTGTGTTCTCTCTGTCCTCGCTTCCGAATACACTCATCATCGGCCTTCCGATGACGACGGCGATGTACGGCCAAGAATCCGCTAGTTTCATGATTCAGACTTTGATTTTTCAGAACGCGATTTGGATCAATGTGTTGATTGTTCTGTTCGAGTATAGAGCTGCGAGGATATTTGTCGAGGCGGAGAGATTGAATTTGTCAGTGGCGAAGGGTCGGAGGCCTGGCGGAGAGTGTGGTTTGGTGGATATGAGCGGATTGAAGCAGATTTTTCCGGAGAAAACAGAGGTTAATGTTATATCTGTTGATCGTGACGGTGAAATTGTCTCTGAAGGTAATTGTAATGGAGGATCTCCGCCGAAAGAGATACGTCCGGCTGACGGTGGTGGTGGTTCTGGACATGTAGGGCTGATTTTGGAGCCTGAGAAGGAAGTTGATCTCCCATCGGAGGATACCTCGTCTTCCACAGGCATAAAAATGCCAACAGTGTTGCAAAGATGTGCTGCTTTTCCTCAAGGAGTTGTTTCATTTGTATTTGCTAAGCAATACAATGTTTACCCAAACGTAATGAGTACTTCGGTGGTTGTTGGAATGTTGATTGCCTTCCCAATAATTCTATGTTATTATCTGCTTCTGGGGGTCGTTTTTAAATAAAGCAAACTGGAAGACCTGAAGAGTAAAAAGTGAAAAGTTCAGGGGCACCATGTAAAAACCACCTTCAACAATTTTTATGTAGGAGGTTGTAAATTCTAGTGTACTTTGTGAACAATATTTTCAATATCGACCGTAGCTTACCGAGTATCATTTGGGGTTTGATCTATTTTGAGCGGATTTAATTCTACAGTGTCACCTTTTTGTATCTGTCTCACTTACTATCGAAGCACGAGTGAATCATAGGGATCATAATTAACTTCCAACCTCAATCATGGATTTAAGAGCGTTTAATCCAAATTGTTATCATGTCTATGTAAAGGACGAACATGTCATTATTTTTACTAACCATCATTGTAAGTTACAAAAACGAGACATGCTTGTGAACTTGCATAAGTTGAAGCTGTCATGAATTGTTTTTGTTCTAAACTTTAACTATCATCATAATCGTAGTTCGAACGTTTTGACTAACTTTCTCTATCTAATAAACTTCATCTCATTCCATATAGGAAACTTACGACAAGCTCTGGCTGTCGGATTTACAAATTTTTTTGTA

Coding sequence (CDS)

ATGATCGCCGGCAAGGATGTTGTCGAGATACTCTGCGCAATCATCCCTATGTACTTTCCGCTAGCAATCGCCTACATTACTGTCCGGTGGCTCAAACTCTTCACCGCCGAGCAATCAGCCGGAATCAACCGCTTCGTCAGAACCCTAGCCATTCCATTCCTCGCCTTCAAAGTAATCTCATCAAACAACCTCCTCGCCATCCATCTCAGACTCTTCGCCGCGGATTCGCTTCAGAAGCTCATCTCCCTCGTCGCTCTGTTCCTCTGGAAAATCCTCTGCAAAAACGCCTCTCTCGAATGGATGATCACTGTGTTCTCTCTGTCCTCGCTTCCGAATACACTCATCATCGGCCTTCCGATGACGACGGCGATGTACGGCCAAGAATCCGCTAGTTTCATGATTCAGACTTTGATTTTTCAGAACGCGATTTGGATCAATGTGTTGATTGTTCTGTTCGAGTATAGAGCTGCGAGGATATTTGTCGAGGCGGAGAGATTGAATTTGTCAGTGGCGAAGGGTCGGAGGCCTGGCGGAGAGTGTGGTTTGGTGGATATGAGCGGATTGAAGCAGATTTTTCCGGAGAAAACAGAGGTTAATGTTATATCTGTTGATCGTGACGGTGAAATTGTCTCTGAAGGTAATTGTAATGGAGGATCTCCGCCGAAAGAGATACGTCCGGCTGACGGTGGTGGTGGTTCTGGACATGTAGGGCTGATTTTGGAGCCTGAGAAGGAAGTTGATCTCCCATCGGAGGATACCTCGTCTTCCACAGGCATAAAAATGCCAACAGTGTTGCAAAGATGTGCTGCTTTTCCTCAAGGAGTTGTTTCATTTGTATTTGCTAAGCAATACAATGTTTACCCAAACGTAATGAGTACTTCGGTGGTTGTTGGAATGTTGATTGCCTTCCCAATAATTCTATGTTATTATCTGCTTCTGGGGGTCGTTTTTAAATAA

Protein sequence

MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVISSNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPMTTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGECGLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLILEPEKEVDLPSEDTSSSTGIKMPTVLQRCAAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGVVFK

Homology

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BLAST of Carg19842 vs. NCBI nr
Match: XP_022929755.1 (auxin efflux carrier component 2-like [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 6.0e-154
Identity = 316/426 (74.18%), Postives = 317/426 (74.41%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS
Sbjct: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQES SFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC
Sbjct: 121 TTAMYGQESVSFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240
           GLVDMSGLKQIFPEKTEVNV+SVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL
Sbjct: 181 GLVDMSGLKQIFPEKTEVNVVSVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240

Query: 241 EPEKEVDLPSEDTSSST---------------------------------------GIKM 300
           EPEKEVDLPSEDTSSST                                       GIKM
Sbjct: 241 EPEKEVDLPSEDTSSSTERSGMTKLIAFRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 PTVLQRC----------------------------------------------------- 319
           PTVLQRC                                                     
Sbjct: 301 PTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSAATS 360

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BLAST of Carg19842 vs. NCBI nr
Match: XP_023546740.1 (probable auxin efflux carrier component 1d [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.5 bits (1373), Expect = 4.9e-148
Identity = 308/426 (72.30%), Postives = 311/426 (73.00%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI GKDVVEIL AIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS
Sbjct: 1   MITGKDVVEILFAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLLAI+LRLFAADSLQKLISL ALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLRLFAADSLQKLISLAALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQES SFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC
Sbjct: 121 TTAMYGQESVSFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240
           GLVDMSGLKQIFPEKTE NV+SVDRDGEIVSEGN NGGSPPKEIRPA+GGGGSGHVGLIL
Sbjct: 181 GLVDMSGLKQIFPEKTEANVVSVDRDGEIVSEGNGNGGSPPKEIRPAEGGGGSGHVGLIL 240

Query: 241 EPEKEVDLPSEDTSSST---------------------------------------GIKM 300
           EPEKEVDLPSEDTSSS                                        GIKM
Sbjct: 241 EPEKEVDLPSEDTSSSAGRSGMTKLIAYRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 PTVLQRC----------------------------------------------------- 319
           PTVLQRC                                                     
Sbjct: 301 PTVLQRCVLTFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSATTS 360

[Close]

BLAST of Carg19842 vs. NCBI nr
Match: XP_022997608.1 (auxin efflux carrier component 2-like [Cucurbita maxima])

HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145
Identity = 304/426 (71.36%), Postives = 309/426 (72.54%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MIAGKDVVEIL AIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAF+VIS
Sbjct: 1   MIAGKDVVEILLAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFRVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLL I+LRLFAADSLQKLISL ALFLWKIL KNASLEWMITVFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLGINLRLFAADSLQKLISLAALFLWKILFKNASLEWMITVFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQES SFMIQTLIFQNAIWINVLIVLFEYR+ARIFVEAERL+LSVAKGRR GGEC
Sbjct: 121 TTAMYGQESISFMIQTLIFQNAIWINVLIVLFEYRSARIFVEAERLSLSVAKGRRTGGEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240
           GLVDMSGLKQIFPEKTEVNV+SVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLI 
Sbjct: 181 GLVDMSGLKQIFPEKTEVNVVSVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIF 240

Query: 241 EPEKEVDLPSEDTSSST---------------------------------------GIKM 300
           EPEKEVDLPSEDTS ST                                       GIKM
Sbjct: 241 EPEKEVDLPSEDTSPSTGRSGMAKLIAFRLGKKITRDPITYSSLIGIIWSLISFKEGIKM 300

Query: 301 PTVLQRC----------------------------------------------------- 319
           PTVLQRC                                                     
Sbjct: 301 PTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSQVAIAMLVRFLISPMLSAATS 360

[Close]

BLAST of Carg19842 vs. NCBI nr
Match: XP_011650130.1 (PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 1.5e-91
Identity = 189/259 (72.97%), Postives = 210/259 (81.08%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MIAGKDV+ IL AI+PMYFPL IAYITVRW  LFT +QSAGI+RFVRTLAIPFL F+VIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLL I+L+LFAADSLQKLISL ALFLWK+LC NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQ S  FMIQTL+FQNAIWINVLIVLFEYRAAR+                   EC
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARM------XXXXXXXXXXXXXEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240
           GLVD++GLKQ+FP+KTEV+V  VD DGE+ SEGN NGG P KEI  ADG GGS H+G+I+
Sbjct: 181 GLVDLNGLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIV 240

Query: 241 EPEKEVDLPSEDTSSSTGI 260
           E EKE D  SEDT SS GI
Sbjct: 241 EAEKEND-QSEDTFSSKGI 252

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BLAST of Carg19842 vs. NCBI nr
Match: KGN61265.1 (hypothetical protein Csa_2G074260 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 2.1e-90
Identity = 187/256 (73.05%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MIAGKDV+ IL AI+PMYFPL IAYITVRW  LFT +QSAGI+RFVRTLAIPFL F+VIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLL I+L+LFAADSLQKLISL ALFLWK+LC NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQ S  FMIQTL+FQNAIWINVLIVLFEYRAAR+                   EC
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARM------XXXXXXXXXXXXXEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240
           GLVD++GLKQ+FP+KTEV+V  VD DGE+ SEGN NGG P KEI  ADG GGS H+G+I+
Sbjct: 181 GLVDLNGLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIV 240

Query: 241 EPEKEVDLPSEDTSSS 257
           E EKE D  SEDT SS
Sbjct: 241 EAEKEND-QSEDTFSS 249

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BLAST of Carg19842 vs. TAIR10
Match: AT5G57090.1 (Auxin efflux carrier family protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-40
Identity = 78/164 (47.56%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI GKD+ ++L A++P+Y  + +AY +VRW  +FT +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SN+  A++    AADSLQK++ L ALFLW+   +  SLEWMIT+FSLS+LPNTL++G+P+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAE 165
             AMYG  S + M+Q ++ Q+ IW  +++ LFE+R A++ +  +
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQ 164

HSP 2 Score: 63.5 bits (153), Expect = 2.6e-10
Identity = 28/47 (59.57%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P+++ST+V+ GML+A P+ + YY+LLG+
Sbjct: 601 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPVTVLYYVLLGL 647

[Close]

BLAST of Carg19842 vs. TAIR10
Match: AT1G23080.1 (Auxin efflux carrier family protein)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 81/161 (50.31%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI   D+  +L A+IP+Y  + +AY +VRW K+F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNN  A++LR  AAD+LQKLI L  L +W    ++ SLEW IT+FSLS+LPNTL++G+P+
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG+ S S M+Q ++ Q  IW  +L+ LFEYR A+I +
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILI 161

HSP 2 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P ++ST V+ GMLIA PI L YY+LLG+
Sbjct: 573 AALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 619

[Close]

BLAST of Carg19842 vs. TAIR10
Match: AT2G01420.2 (Auxin efflux carrier family protein)

HSP 1 Score: 159.1 bits (401), Expect = 4.6e-39
Identity = 79/161 (49.07%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI   D+  +L A++P+Y  + +AY +V+W K+F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +N+  A++ R  AAD+LQK+I LV L LW  L KN SLEWMIT+FSLS+LPNTL++G+P+
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG  + S M+Q ++ Q  IW  +L+ LFEYR A++ +
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLI 161

HSP 2 Score: 65.1 bits (157), Expect = 9.0e-11
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P ++ST V+ GMLIA PI L YY+LLG+
Sbjct: 570 AALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIALPITLVYYILLGL 616

[Close]

BLAST of Carg19842 vs. TAIR10
Match: AT1G70940.1 (Auxin efflux carrier family protein)

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-38
Identity = 78/161 (48.45%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI+  D+  +L A+IP+Y  + +AY +VRW K+F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +NN  A++LR  AAD+LQK+I L  L LW    ++ SLEW IT+FSLS+LPNTL++G+P+
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG+ S S M+Q ++ Q  IW  +L+ LFE+R A++ +
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLI 161

HSP 2 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P ++ST V+ GMLIA PI L YY+LLG+
Sbjct: 594 AALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 640

[Close]

BLAST of Carg19842 vs. TAIR10
Match: AT1G73590.1 (Auxin efflux carrier family protein)

HSP 1 Score: 155.2 bits (391), Expect = 6.6e-38
Identity = 76/164 (46.34%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI   D   ++ A++P+Y  + +AY +V+W K+FT +Q +GINRFV   A+P L+F  I+
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +NN  A++LR  AADSLQK+I L  LFLW  L +N SL+W IT+FSLS+LPNTL++G+P+
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAE 165
              MYG  S   M+Q ++ Q  IW  +++ LFEYR A++ +  +
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQ 164

HSP 2 Score: 65.9 bits (159), Expect = 5.3e-11
Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P+++ST+V+ GMLIA PI L YY+LLG+
Sbjct: 576 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622

[Close]

BLAST of Carg19842 vs. Swiss-Prot
Match: sp|Q9LU77|PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 2.6e-39
Identity = 78/164 (47.56%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI GKD+ ++L A++P+Y  + +AY +VRW  +FT +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SN+  A++    AADSLQK++ L ALFLW+   +  SLEWMIT+FSLS+LPNTL++G+P+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAE 165
             AMYG  S + M+Q ++ Q+ IW  +++ LFE+R A++ +  +
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQ 164

HSP 2 Score: 63.5 bits (153), Expect = 4.7e-09
Identity = 28/47 (59.57%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P+++ST+V+ GML+A P+ + YY+LLG+
Sbjct: 601 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPVTVLYYVLLGL 647

[Close]

BLAST of Carg19842 vs. Swiss-Prot
Match: sp|Q940Y5|PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana OX=3702 GN=PIN7 PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-38
Identity = 81/161 (50.31%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI   D+  +L A+IP+Y  + +AY +VRW K+F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNN  A++LR  AAD+LQKLI L  L +W    ++ SLEW IT+FSLS+LPNTL++G+P+
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG+ S S M+Q ++ Q  IW  +L+ LFEYR A+I +
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILI 161

HSP 2 Score: 64.3 bits (155), Expect = 2.8e-09
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P ++ST V+ GMLIA PI L YY+LLG+
Sbjct: 573 AALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 619

[Close]

BLAST of Carg19842 vs. Swiss-Prot
Match: sp|Q8RWZ6|PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana OX=3702 GN=PIN4 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-38
Identity = 79/161 (49.07%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI   D+  +L A++P+Y  + +AY +V+W K+F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +N+  A++ R  AAD+LQK+I LV L LW  L KN SLEWMIT+FSLS+LPNTL++G+P+
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG  + S M+Q ++ Q  IW  +L+ LFEYR A++ +
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLI 161

HSP 2 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P ++ST V+ GMLIA PI L YY+LLG+
Sbjct: 570 AALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIALPITLVYYILLGL 616

[Close]

BLAST of Carg19842 vs. Swiss-Prot
Match: sp|Q67UL3|PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-37
Identity = 77/161 (47.83%), Postives = 112/161 (69.57%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI G D   ++ A++P+Y  + +AY +V+W ++FT +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +NN   ++LR  AAD+LQKLI L  L LW  L +  SLEW IT+FSLS+LPNTL++G+P+
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
              MYG+ S S M+Q ++ Q  IW  +++ +FEYR ARI +
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILI 161

HSP 2 Score: 63.9 bits (154), Expect = 3.6e-09
Identity = 30/47 (63.83%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+Y+V+P+++ST+V+ GMLIA PI L YY+LLG+
Sbjct: 546 AALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLGL 592

[Close]

BLAST of Carg19842 vs. Swiss-Prot
Match: sp|Q9S7Z8|PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana OX=3702 GN=PIN3 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-37
Identity = 78/161 (48.45%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI+  D+  +L A+IP+Y  + +AY +VRW K+F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +NN  A++LR  AAD+LQK+I L  L LW    ++ SLEW IT+FSLS+LPNTL++G+P+
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG+ S S M+Q ++ Q  IW  +L+ LFE+R A++ +
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLI 161

HSP 2 Score: 64.3 bits (155), Expect = 2.8e-09
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 269 AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLLGV 316
           AA PQG+V FVFAK+YNV+P ++ST V+ GMLIA PI L YY+LLG+
Sbjct: 594 AALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 640

[Close]

BLAST of Carg19842 vs. TrEMBL
Match: tr|A0A0A0LH32|A0A0A0LH32_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074260 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 187/256 (73.05%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MIAGKDV+ IL AI+PMYFPL IAYITVRW  LFT +QSAGI+RFVRTLAIPFL F+VIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLL I+L+LFAADSLQKLISL ALFLWK+LC NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQ S  FMIQTL+FQNAIWINVLIVLFEYRAAR+                   EC
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARM------XXXXXXXXXXXXXEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGSPPKEIRPADGGGGSGHVGLIL 240
           GLVD++GLKQ+FP+KTEV+V  VD DGE+ SEGN NGG P KEI  ADG GGS H+G+I+
Sbjct: 181 GLVDLNGLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIV 240

Query: 241 EPEKEVDLPSEDTSSS 257
           E EKE D  SEDT SS
Sbjct: 241 EAEKEND-QSEDTFSS 249

[Close]

BLAST of Carg19842 vs. TrEMBL
Match: tr|A0A1S4DU10|A0A1S4DU10_CUCME (probable auxin efflux carrier component 2 OS=Cucumis melo OX=3656 GN=LOC103485950 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.4e-87
Identity = 201/355 (56.62%), Postives = 231/355 (65.07%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MIAGKDV++IL AI+PMYFPL IAY+TVRW  LFT +QSAGI+RFVRTLAIPFL F+VIS
Sbjct: 1   MIAGKDVIDILSAIVPMYFPLTIAYVTVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNNLLAI+L+LFAADSLQKLISL ALFLWK+L  NASL+WMIT+FSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLKLFAADSLQKLISLAALFLWKLLHTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFVEAERLNLSVAKGRRPGGEC 180
           TTAMYGQ S  FMIQTL+FQNAIWINVLIVLFEYRAAR+                   EC
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARM------XXXXXXXXXXXXXEC 180

Query: 181 GLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCNGGS------PPKEIRPADGGGGSG 240
           GLVD++GLKQ+FPEKTEV+V+ VD +GEI SE +           P KEI P DG GGS 
Sbjct: 181 GLVDLNGLKQVFPEKTEVSVVCVDGNGEIGSEVDXXXXXXXXXXFPAKEIVPGDGSGGSR 240

Query: 241 HVGLILEPEKEVDLPSEDTSSSTG------------------------------------ 300
           H+G+I+E EKE DL  EDT SS G                                    
Sbjct: 241 HIGVIVEAEKENDLQLEDTFSSEGRSGMTKLVVYMVWKKIRRNPITYASLVGIIWSLVSF 300

Query: 301 ---IKMPTVLQRCAAF----PQGVVSFVFAKQYNVYPNVMSTSV---VVGMLIAF 304
              IKMPTVLQRC        Q +  F         PN+++ S+      ML+ F
Sbjct: 301 KYDIKMPTVLQRCVLMLSDTGQALSMFTLGIFMAAQPNIIACSMSEAASAMLVRF 349

[Close]

BLAST of Carg19842 vs. TrEMBL
Match: tr|A0A2N9FTZ4|A0A2N9FTZ4_FAGSY (Auxin efflux carrier component OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18525 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.8e-45
Identity = 92/161 (57.14%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI GKD+ E+L A++P+Y  +++A+ +VRW K+FT EQ AGINRFV   AIPFL+FK+IS
Sbjct: 1   MITGKDIYEVLAALVPLYVAMSLAFASVRWWKIFTPEQCAGINRFVAVFAIPFLSFKLIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNN   +  +  AADSLQK+  LV LFLWK + KN SLEWMIT+FSLS+LPNTL++G+P+
Sbjct: 61  SNNPYTMQYQFIAADSLQKIFMLVILFLWKTISKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG  SAS M+Q ++FQ  IW  +L+++FEYR A+I +
Sbjct: 121 LKAMYGDFSASLMVQIVVFQGVIWNTLLLIMFEYRGAKILI 161

HSP 2 Score: 58.9 bits (141), Expect = 2.4e-05
Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 253 TSSSTGIK--MPTVLQRCAAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYY 312
           TS +TG++  +  V    A  PQ +VSFVFAK+YNV+ +++STSV  GM++A PI + YY
Sbjct: 464 TSIATGLRGDLLHVAIVQATLPQAIVSFVFAKEYNVHADILSTSVTFGMVVALPIAILYY 523

Query: 313 LLLGV 316
           +LLG+
Sbjct: 524 VLLGL 528

[Close]

BLAST of Carg19842 vs. TrEMBL
Match: tr|A0A2P4J093|A0A2P4J093_QUESU (Auxin efflux carrier component 2 OS=Quercus suber OX=58331 GN=CFP56_46927 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.5e-44
Identity = 92/161 (57.14%), Postives = 123/161 (76.40%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI GKDV E+L +++P+Y  + +AY +VRW KLFT EQ AGINRFV   AIPFL+FK+I+
Sbjct: 1   MITGKDVYEVLASLVPLYVAMTLAYASVRWWKLFTPEQCAGINRFVAVFAIPFLSFKLIA 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           SNN   +H +  AADSLQK++ LV LFLWKI  K +SLEW IT+FSLS+LPNTL++G+P+
Sbjct: 61  SNNPYKVHYQFIAADSLQKVVILVILFLWKIDSKKSSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIFV 162
             AMYG  SAS M+Q ++FQ  +W  +L++LFEY  A+I +
Sbjct: 121 LKAMYGDFSASLMVQIVVFQGVVWNTLLLILFEYIGAKILI 161

[Close]

BLAST of Carg19842 vs. TrEMBL
Match: tr|J3N5V9|J3N5V9_ORYBR (Auxin efflux carrier component OS=Oryza brachyantha OX=4533 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 129/362 (35.64%), Postives = 191/362 (52.76%), Query Frame = 0


Query: 1   MIAGKDVVEILCAIIPMYFPLAIAYITVRWLKLFTAEQSAGINRFVRTLAIPFLAFKVIS 60
           MI   D+  +L A++P+Y  + +AY +VRW ++F+ +Q +GINRFV   A+P L+F  IS
Sbjct: 1   MITVLDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNNLLAIHLRLFAADSLQKLISLVALFLWKILCKNASLEWMITVFSLSSLPNTLIIGLPM 120
           +NN  A++LR  AADSLQKLI L  L LW  L    SL+W+IT+FSLS+LPNTL++G+P+
Sbjct: 61  TNNPFAMNLRFLAADSLQKLIVLALLALWCRLSCRGSLDWLITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQESASFMIQTLIFQNAIWINVLIVLFEYRAARIF----VEAERLNLSVAKGRRP 180
              MYG +S S M+Q ++ Q  IW  +++ LFEYR AR+         +L  +     RP
Sbjct: 121 LRGMYGADSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLDGHGPTLSKLGSNSTAQLRP 180

Query: 181 GGECGLVDMSGLKQIFPEKTEVNVISVDRDGEIVSEGNCN---------------GGSPP 240
             + G    + L    P      +I +    +++   N                 G   P
Sbjct: 181 KDD-GEERPAALP---PASVMTRLILIMVWRKLIRNPNTYSSLLGIIWSLVSYRWGIEMP 240

Query: 241 KEIRP-----ADGGGGSG--HVGLILEPEKEVDL-----------------PSEDTSSST 300
             I       +D G G     +GL +  +  +                   P+   + S 
Sbjct: 241 AIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSVASFAMAVRFLMGPAVMAAVSI 300

Query: 301 GIKMPTVLQRC----AAFPQGVVSFVFAKQYNVYPNVMSTSVVVGMLIAFPIILCYYLLL 316
            + +  VL       AA PQG+V FVFAK+YNV+P+++ST+V+ GMLIA PI L YY+LL
Sbjct: 301 AVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILL 358

The following BLAST results are available for this feature:

BLAST of Carg19842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929755.1	6.0e-154	74.18	auxin efflux carrier component 2-like [Cucurbita moschata]	[more]
XP_023546740.1	4.9e-148	72.30	probable auxin efflux carrier component 1d [Cucurbita pepo subsp. pepo]	[more]
XP_022997608.1	1.0e-145	71.36	auxin efflux carrier component 2-like [Cucurbita maxima]	[more]
XP_011650130.1	1.5e-91	72.97	PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus]	[more]
KGN61265.1	2.1e-90	73.05	hypothetical protein Csa_2G074260 [Cucumis sativus]	[more]

BLAST of Carg19842 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57090.1	1.4e-40	47.56	Auxin efflux carrier family protein	[more]
AT1G23080.1	1.2e-39	50.31	Auxin efflux carrier family protein	[more]
AT2G01420.2	4.6e-39	49.07	Auxin efflux carrier family protein	[more]
AT1G70940.1	3.0e-38	48.45	Auxin efflux carrier family protein	[more]
AT1G73590.1	6.6e-38	46.34	Auxin efflux carrier family protein	[more]

BLAST of Carg19842 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LU77\|PIN2_ARATH	2.6e-39	47.56	Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV...	[more]
sp\|Q940Y5\|PIN7_ARATH	2.2e-38	50.31	Auxin efflux carrier component 7 OS=Arabidopsis thaliana OX=3702 GN=PIN7 PE=1 SV...	[more]
sp\|Q8RWZ6\|PIN4_ARATH	8.3e-38	49.07	Auxin efflux carrier component 4 OS=Arabidopsis thaliana OX=3702 GN=PIN4 PE=1 SV...	[more]
sp\|Q67UL3\|PIN1C_ORYSJ	5.4e-37	47.83	Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39...	[more]
sp\|Q9S7Z8\|PIN3_ARATH	5.4e-37	48.45	Auxin efflux carrier component 3 OS=Arabidopsis thaliana OX=3702 GN=PIN3 PE=1 SV...	[more]

BLAST of Carg19842 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LH32\|A0A0A0LH32_CUCSA	1.4e-90	73.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074260 PE=4 SV=1	[more]
tr\|A0A1S4DU10\|A0A1S4DU10_CUCME	1.4e-87	56.62	probable auxin efflux carrier component 2 OS=Cucumis melo OX=3656 GN=LOC10348595...	[more]
tr\|A0A2N9FTZ4\|A0A2N9FTZ4_FAGSY	6.8e-45	57.14	Auxin efflux carrier component OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18525 PE=...	[more]
tr\|A0A2P4J093\|A0A2P4J093_QUESU	7.5e-44	57.14	Auxin efflux carrier component 2 OS=Quercus suber OX=58331 GN=CFP56_46927 PE=4 S...	[more]
tr\|J3N5V9\|J3N5V9_ORYBR	1.2e-41	35.64	Auxin efflux carrier component OS=Oryza brachyantha OX=4533 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0010329	auxin efflux transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0010315	auxin efflux
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR033526	PIN2
IPR004776	Mem_trans

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010315	auxin efflux
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19842-RA	Carg19842-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 10..164 e-value: 4.3E-39 score: 133.9 coord: 268..310 e-value: 3.7E-11 score: 42.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..230
None	No IPR available	PANTHER	PTHR31752	FAMILY NOT NAMED	coord: 269..315 coord: 1..162
IPR033526	Auxin efflux carrier component 2	PANTHER	PTHR31752:SF4	AUXIN EFFLUX CARRIER COMPONENT 2	coord: 269..315 coord: 1..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19842	Cla007935	Watermelon (97103) v1	carwmB0155
Carg19842	Csa2G074260	Cucumber (Chinese Long) v2	carcuB0184
Carg19842	MELO3C008726	Melon (DHL92) v3.5.1	carmeB0170
Carg19842	ClCG11G010700	Watermelon (Charleston Gray)	carwcgB0158
Carg19842	CSPI02G07240	Wild cucumber (PI 183967)	carcpiB0191
Carg19842	Cucsa.178520	Cucumber (Gy14) v1	carcgyB0204
Carg19842	CmaCh05G007580	Cucurbita maxima (Rimu)	carcmaB0221
Carg19842	CmoCh05G008000	Cucurbita moschata (Rifu)	carcmoB0232
Carg19842	Lsi11G008700	Bottle gourd (USVL1VR-Ls)	carlsiB148
Carg19842	Cp4.1LG11g06810	Cucurbita pepo (Zucchini)	carcpeB0237
Carg19842	CsGy2G007470	Cucumber (Gy14) v2	carcgybB0179
Carg19842	MELO3C008726.2	Melon (DHL92) v3.6.1	carmedB0172
Carg19842	CsaV3_2G009700	Cucumber (Chinese Long) v3	carcucB0191
Carg19842	Cla97C11G216910	Watermelon (97103) v2	carwmbB0172
Carg19842	Bhi06G000968	Wax gourd	carwgoB0214

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19842	Wax gourd	carwgoB0215
Carg19842	Silver-seed gourd	carcarB202
Carg19842	Cucurbita maxima (Rimu)	carcmaB0220
Carg19842	Cucurbita moschata (Rifu)	carcmoB0231
Carg19842	Cucurbita pepo (Zucchini)	carcpeB0238