CSPI02G07240 (gene) Wild cucumber (PI 183967)

NameCSPI02G07240
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAuxin efflux carrier family protein
LocationChr2 : 6080024 .. 6080830 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGCCGGCAAGGATGTTATCAACATTCTCAGCGCAATCGTCCCAATGTACTTCCCACTAACAATAGCCTACATTACTGTACGGTGGTTCAACCTCTTCACCCCCGACCAATCCGCCGGAATCAGCCGCTTCGTTAGAACCCTCGCCATTCCATTCCTCTGCTTCCAAGTAATCTCTTCCAACAATCTCCTTACCATTAATCTCAAACTCTTCGCCGCCGATTCACTTCAGAAGCTTATTTCCCTCGCCGCTCTGTTCCTCTGGAAATTGCTCTGTACCAACGCCTCTCTCGATTGGATGATTACTCTCTTCTCTCTCTCTTCTCTTCCCAATACGCTCATCATCGGCCTTCCAATGACGACGGCGATGTACGGCCAAGGTTCGGTTGGTTTCATGATTCAGACTCTGGTTTTTCAGAACGCCATTTGGATCAATGTGTTGATTGTTCTGTTCGAGTATAGGGCTGCGAGAATGATTGTGGCGGCGGAGGAGGATCGGAGGGGTGGTTTGGTGGATTTAAATGGATTGAAACAGGTTTTTCCAGATAAAACAGAGGTGAGTGTTGGGTGTGTTGATGGCGATGGTGAAGTTGGAAGTGAAGGTAATGGTAATGGAGGTTTTCCGGTGAAAGAGATAGTTTCGGCCGACGGCGACGGTGGTTCTAGACATATAGGGGTGATTATAGAGGCTGAGAAGGAAAATGATCTCCAATCGGAGGATACTTTTTCCTCCAAAGGTATTTTGTGCAATAATCCATTCATTAAATCATTTCTAGTAACTTCAATTATTACTTTCAATAAATAA

mRNA sequence

ATGATTGCCGGCAAGGATGTTATCAACATTCTCAGCGCAATCGTCCCAATGTACTTCCCACTAACAATAGCCTACATTACTGTACGGTGGTTCAACCTCTTCACCCCCGACCAATCCGCCGGAATCAGCCGCTTCGTTAGAACCCTCGCCATTCCATTCCTCTGCTTCCAAGTAATCTCTTCCAACAATCTCCTTACCATTAATCTCAAACTCTTCGCCGCCGATTCACTTCAGAAGCTTATTTCCCTCGCCGCTCTGTTCCTCTGGAAATTGCTCTGTACCAACGCCTCTCTCGATTGGATGATTACTCTCTTCTCTCTCTCTTCTCTTCCCAATACGCTCATCATCGGCCTTCCAATGACGACGGCGATGTACGGCCAAGGTTCGGTTGGTTTCATGATTCAGACTCTGGTTTTTCAGAACGCCATTTGGATCAATGTGTTGATTGTTCTGTTCGAGTATAGGGCTGCGAGAATGATTGTGGCGGCGGAGGAGGATCGGAGGGGTGGTTTGGTGGATTTAAATGGATTGAAACAGGTTTTTCCAGATAAAACAGAGGTGAGTGTTGGGTGTGTTGATGGCGATGGTGAAGTTGGAAGTGAAGGTAATGGTAATGGAGGTTTTCCGGTGAAAGAGATAGTTTCGGCCGACGGCGACGGTGGTTCTAGACATATAGGGGTGATTATAGAGGCTGAGAAGGAAAATGATCTCCAATCGGAGGATACTTTTTCCTCCAAAGTAACTTCAATTATTACTTTCAATAAATAA

Coding sequence (CDS)

ATGATTGCCGGCAAGGATGTTATCAACATTCTCAGCGCAATCGTCCCAATGTACTTCCCACTAACAATAGCCTACATTACTGTACGGTGGTTCAACCTCTTCACCCCCGACCAATCCGCCGGAATCAGCCGCTTCGTTAGAACCCTCGCCATTCCATTCCTCTGCTTCCAAGTAATCTCTTCCAACAATCTCCTTACCATTAATCTCAAACTCTTCGCCGCCGATTCACTTCAGAAGCTTATTTCCCTCGCCGCTCTGTTCCTCTGGAAATTGCTCTGTACCAACGCCTCTCTCGATTGGATGATTACTCTCTTCTCTCTCTCTTCTCTTCCCAATACGCTCATCATCGGCCTTCCAATGACGACGGCGATGTACGGCCAAGGTTCGGTTGGTTTCATGATTCAGACTCTGGTTTTTCAGAACGCCATTTGGATCAATGTGTTGATTGTTCTGTTCGAGTATAGGGCTGCGAGAATGATTGTGGCGGCGGAGGAGGATCGGAGGGGTGGTTTGGTGGATTTAAATGGATTGAAACAGGTTTTTCCAGATAAAACAGAGGTGAGTGTTGGGTGTGTTGATGGCGATGGTGAAGTTGGAAGTGAAGGTAATGGTAATGGAGGTTTTCCGGTGAAAGAGATAGTTTCGGCCGACGGCGACGGTGGTTCTAGACATATAGGGGTGATTATAGAGGCTGAGAAGGAAAATGATCTCCAATCGGAGGATACTTTTTCCTCCAAAGTAACTTCAATTATTACTTTCAATAAATAA
BLAST of CSPI02G07240 vs. Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 5.7e-42
Identity = 89/200 (44.50%), Postives = 133/200 (66.50%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+A+VP+Y  + +AY +VRW+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SN+   +N    AADSLQK++ LAALFLW+      SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGG---------- 180
             AMYG  S   M+Q +V Q+ IW  +++ LFE+R A+++++ +     G          
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSD 180

Query: 181 LVDLNGLKQVFPDKTEVSVG 191
           ++ LNG +   P +T+  +G
Sbjct: 181 VISLNGRE---PLQTDAEIG 197

BLAST of CSPI02G07240 vs. Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.2e-40
Identity = 86/197 (43.65%), Postives = 127/197 (64.47%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI G D  ++++A+VP+Y  + +AY +V+W+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN  T+NL+  AAD+LQKLI LA L LW  L    SL+W ITLFSLS+LPNTL++G+P+
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGG---------- 180
              MYG+ S   M+Q +V Q  IW  +++ +FEYR AR+++  +     G          
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDAD 180

Query: 181 LVDLNGLKQVFPDKTEV 188
           +V L+G + +   + EV
Sbjct: 181 VVSLDGRRDMIETEAEV 197

BLAST of CSPI02G07240 vs. Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 82/176 (46.59%), Postives = 122/176 (69.32%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI   D  ++++A+VP+Y  + +AY +V+W+ +FTPDQ +GI+RFV   A+P L F  I+
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN   +NL+  AADSLQK+I L+ LFLW  L  N SLDW ITLFSLS+LPNTL++G+P+
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAE-EDRRGGLVDLN 176
              MYG  S   M+Q +V Q  IW  +++ LFEYR A+++++ +  D  G +V ++
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIH 176

BLAST of CSPI02G07240 vs. Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-39
Identity = 91/206 (44.17%), Postives = 133/206 (64.56%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI+G D   +++A+VP+Y  + +AY +VRW+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNAS---LDWMITLFSLSSLPNTLIIG 120
           +N+   +NL+  AAD+LQKL+ LA L  W  L +      LDW ITLFSLS+LPNTL++G
Sbjct: 61  TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120

Query: 121 LPMTTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAE-EDRRGGLVDLNG 180
           +P+  AMYG  S   M+Q +V Q  IW  +++ LFE+RAARM++A +  D    +V L+ 
Sbjct: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLH- 180

Query: 181 LKQVFPDKTEVSVGCVDGDGEVGSEG 203
              V PD   +  G  + + EV ++G
Sbjct: 181 ---VDPDVVSLEGGHAETEAEVAADG 202

BLAST of CSPI02G07240 vs. Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 96/232 (41.38%), Postives = 139/232 (59.91%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI G+D+ ++L+AIVP+Y  + +AY +VRW+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTN--------ASLDWMITLFSLSSLPN 120
           +N+  ++N +  AADSLQKL+ LAAL +W  L +         ASLDW ITLFSLS+LPN
Sbjct: 61  TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120

Query: 121 TLIIGLPMTTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLV 180
           TL++G+P+  AMYG  S   M+Q +V Q+ IW  +++ LFEYR A+ +++ +     G  
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGA- 180

Query: 181 DLNGLKQVFPDKTEVSVG---CVDGDGEVGSEGNGNGGFPVKEIVSADGDGG 222
               +     D   VS+     +  D EVG +G  +         S  G GG
Sbjct: 181 ---SIASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGG 228

BLAST of CSPI02G07240 vs. TrEMBL
Match: A0A0A0LH32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074260 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 3.9e-130
Identity = 252/260 (96.92%), Postives = 253/260 (97.31%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG-----GLVDLN 180
           TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG     GLVDLN
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIIEAEKEN 240
           GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVI+EAEKEN
Sbjct: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKEN 240

Query: 241 DLQSEDTFSSKVTSIITFNK 256
           D QSEDTFSSKVTS ITFNK
Sbjct: 241 D-QSEDTFSSKVTSFITFNK 259

BLAST of CSPI02G07240 vs. TrEMBL
Match: A5BFN9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032889 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.0e-42
Identity = 89/197 (45.18%), Postives = 132/197 (67.01%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+AIVP+Y  + +AY +VRW+ +FTP+Q AGI+RFV   A+P L F  IS
Sbjct: 1   MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
            N++  +N K  AADSLQK++ L+ALFLW+    N SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  LNDIYNMNYKFIAADSLQKIVILSALFLWQAFAKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLV-------D 180
             AMYG  S   M+Q +V Q+ IW  +++ +FEYR A++++  +     G +       D
Sbjct: 121 LKAMYGDFSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVESD 180

Query: 181 LNGLKQVFPDKTEVSVG 191
           +  L    P +T+  +G
Sbjct: 181 VMSLNGREPLETDAEIG 197

BLAST of CSPI02G07240 vs. TrEMBL
Match: F6GXI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00440 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.0e-42
Identity = 89/197 (45.18%), Postives = 132/197 (67.01%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+AIVP+Y  + +AY +VRW+ +FTP+Q AGI+RFV   A+P L F  IS
Sbjct: 1   MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
            N++  +N K  AADSLQK++ L+ALFLW+    N SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  LNDIYNMNYKFIAADSLQKIVILSALFLWQAFAKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLV-------D 180
             AMYG  S   M+Q +V Q+ IW  +++ +FEYR A++++  +     G +       D
Sbjct: 121 LKAMYGDFSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVESD 180

Query: 181 LNGLKQVFPDKTEVSVG 191
           +  L    P +T+  +G
Sbjct: 181 VMSLNGREPLETDAEIG 197

BLAST of CSPI02G07240 vs. TrEMBL
Match: V7AZN4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G234200g PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 91/203 (44.83%), Postives = 138/203 (67.98%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKDV +++SAIVP+Y  L +AY +VRW+ +FTP+Q AGI+RFV   A+PFL F+ IS
Sbjct: 1   MIKGKDVYDVVSAIVPLYVALILAYCSVRWWKIFTPEQCAGINRFVSVFAVPFLSFRFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN  T+N +  AADSLQK++ L AL LW  L    S++W ITLFSLS+LPNTLI+G+P+
Sbjct: 61  NNNPYTMNFRFLAADSLQKVVILVALVLWNSLTKWGSINWTITLFSLSTLPNTLIMGVPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLVDLNGLKQV 180
             AMYG  +   MIQ +VFQ+ IW  +L++++EYR A+++++ +   + G +    +   
Sbjct: 121 LKAMYGDFTAPLMIQIVVFQSVIWFTLLLIMYEYRGAKLLLSEQFPEKAGAIASLRVDSN 180

Query: 181 FPDKTEVSVGCVDGDGEVGSEGN 204
               ++  +  ++ + E G +GN
Sbjct: 181 VDSLSDRKI--LETNAETGEDGN 201

BLAST of CSPI02G07240 vs. TrEMBL
Match: A0A118K778_CYNCS (Auxin efflux carrier OS=Cynara cardunculus var. scolymus GN=Ccrd_009752 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-41
Identity = 92/200 (46.00%), Postives = 133/200 (66.50%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+AIVP+Y  + +AY +VRW+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMMLAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNN   +N    AADSLQKL+ L+ALF+W+ L    SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  SNNPYKMNYHFIAADSLQKLVILSALFVWQWLSKTGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGG---------- 180
             AMYG  S   M+Q +V Q+ IW  +++ +FEYR A++++  +     G          
Sbjct: 121 LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFHVESD 180

Query: 181 LVDLNGLKQVFPDKTEVSVG 191
           +V LNG +   P +T+  +G
Sbjct: 181 VVSLNGRE---PLQTDAEIG 197

BLAST of CSPI02G07240 vs. TAIR10
Match: AT5G57090.1 (AT5G57090.1 Auxin efflux carrier family protein)

HSP 1 Score: 172.6 bits (436), Expect = 3.2e-43
Identity = 89/200 (44.50%), Postives = 133/200 (66.50%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+A+VP+Y  + +AY +VRW+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SN+   +N    AADSLQK++ LAALFLW+      SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGG---------- 180
             AMYG  S   M+Q +V Q+ IW  +++ LFE+R A+++++ +     G          
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSD 180

Query: 181 LVDLNGLKQVFPDKTEVSVG 191
           ++ LNG +   P +T+  +G
Sbjct: 181 VISLNGRE---PLQTDAEIG 197

BLAST of CSPI02G07240 vs. TAIR10
Match: AT1G73590.1 (AT1G73590.1 Auxin efflux carrier family protein)

HSP 1 Score: 164.5 bits (415), Expect = 8.8e-41
Identity = 82/176 (46.59%), Postives = 122/176 (69.32%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI   D  ++++A+VP+Y  + +AY +V+W+ +FTPDQ +GI+RFV   A+P L F  I+
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN   +NL+  AADSLQK+I L+ LFLW  L  N SLDW ITLFSLS+LPNTL++G+P+
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAE-EDRRGGLVDLN 176
              MYG  S   M+Q +V Q  IW  +++ LFEYR A+++++ +  D  G +V ++
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIH 176

BLAST of CSPI02G07240 vs. TAIR10
Match: AT1G23080.1 (AT1G23080.1 Auxin efflux carrier family protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39
Identity = 86/208 (41.35%), Postives = 128/208 (61.54%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI   D+  +L+A++P+Y  + +AY +VRW+ +F+PDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNN   +NL+  AAD+LQKLI L  L +W     + SL+W IT+FSLS+LPNTL++G+P+
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLVDLNGLKQV 180
             AMYG+ S   M+Q +V Q  IW  +L+ LFEYR A++++  +    G          +
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGA--------SI 180

Query: 181 FPDKTEVSVGCVDG------DGEVGSEG 203
              K E  V  +DG      D ++G +G
Sbjct: 181 VSFKVESDVVSLDGHDFLETDAQIGDDG 200

BLAST of CSPI02G07240 vs. TAIR10
Match: AT2G01420.2 (AT2G01420.2 Auxin efflux carrier family protein)

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-39
Identity = 86/208 (41.35%), Postives = 129/208 (62.02%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI   D+  +L+A+VP+Y  + +AY +V+W+ +F+PDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           +N+   +N +  AAD+LQK+I L  L LW  L  N SL+WMIT+FSLS+LPNTL++G+P+
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLVDLNGLKQV 180
             AMYG  +   M+Q +V Q  IW  +L+ LFEYR A++++  +    G          +
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETGA--------SI 180

Query: 181 FPDKTEVSVGCVDG------DGEVGSEG 203
              K E  V  +DG      D E+G++G
Sbjct: 181 VSFKVESDVVSLDGHDFLETDAEIGNDG 200

BLAST of CSPI02G07240 vs. TAIR10
Match: AT1G70940.1 (AT1G70940.1 Auxin efflux carrier family protein)

HSP 1 Score: 158.3 bits (399), Expect = 6.3e-39
Identity = 85/208 (40.87%), Postives = 129/208 (62.02%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI+  D+  +L+A++P+Y  + +AY +VRW+ +F+PDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           +NN   +NL+  AAD+LQK+I L+ L LW     + SL+W IT+FSLS+LPNTL++G+P+
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLVDLNGLKQV 180
             AMYG+ S   M+Q +V Q  IW  +L+ LFE+R A+M++  +               +
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAA--------SI 180

Query: 181 FPDKTEVSVGCVDG------DGEVGSEG 203
              K E  V  +DG      D E+G +G
Sbjct: 181 VSFKVESDVVSLDGHDFLETDAEIGDDG 200

BLAST of CSPI02G07240 vs. NCBI nr
Match: gi|700206146|gb|KGN61265.1| (hypothetical protein Csa_2G074260 [Cucumis sativus])

HSP 1 Score: 472.2 bits (1214), Expect = 5.6e-130
Identity = 252/260 (96.92%), Postives = 253/260 (97.31%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG-----GLVDLN 180
           TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG     GLVDLN
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIIEAEKEN 240
           GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVI+EAEKEN
Sbjct: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKEN 240

Query: 241 DLQSEDTFSSKVTSIITFNK 256
           D QSEDTFSSKVTS ITFNK
Sbjct: 241 D-QSEDTFSSKVTSFITFNK 259

BLAST of CSPI02G07240 vs. NCBI nr
Match: gi|778674092|ref|XP_011650130.1| (PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus])

HSP 1 Score: 463.0 bits (1190), Expect = 3.4e-127
Identity = 252/273 (92.31%), Postives = 253/273 (92.67%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG-----GLVDLN 180
           TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG     GLVDLN
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIIEAEKEN 240
           GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVI+EAEKEN
Sbjct: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKEN 240

Query: 241 DLQSEDTFSSK-------------VTSIITFNK 256
           D QSEDTFSSK             VTS ITFNK
Sbjct: 241 D-QSEDTFSSKGILFNNPFIKSFLVTSFITFNK 272

BLAST of CSPI02G07240 vs. NCBI nr
Match: gi|659082635|ref|XP_008441950.1| (PREDICTED: probable auxin efflux carrier component 2 [Cucumis melo])

HSP 1 Score: 430.6 bits (1106), Expect = 1.9e-117
Identity = 233/263 (88.59%), Postives = 241/263 (91.63%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MIAGKDVI+ILSAIVPMYFPLTIAY+TVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS
Sbjct: 1   MIAGKDVIDILSAIVPMYFPLTIAYVTVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SNNLL INLKLFAADSLQKLISLAALFLWKLL TNASLDWMITLFSLSSLPNTLIIGLPM
Sbjct: 61  SNNLLAINLKLFAADSLQKLISLAALFLWKLLHTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG-----GLVDLN 180
           TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRG     GLVDLN
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 GLKQVFPDKTEVSVGCVDGDGEVGSE------GNGNGGFPVKEIVSADGDGGSRHIGVII 240
           GLKQVFP+KTEVSV CVDG+GE+GSE      GNGNGGFP KEIV  DG GGSRHIGVI+
Sbjct: 181 GLKQVFPEKTEVSVVCVDGNGEIGSEVDGNGNGNGNGGFPAKEIVPGDGSGGSRHIGVIV 240

Query: 241 EAEKENDLQSEDTFSSKVTSIIT 253
           EAEKENDLQ EDTFSS+  S +T
Sbjct: 241 EAEKENDLQLEDTFSSEGRSGMT 263

BLAST of CSPI02G07240 vs. NCBI nr
Match: gi|1009176488|ref|XP_015869455.1| (PREDICTED: auxin efflux carrier component 2 [Ziziphus jujuba])

HSP 1 Score: 180.3 bits (456), Expect = 4.4e-42
Identity = 92/200 (46.00%), Postives = 134/200 (67.00%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+AIVP+Y  + +AY +VRW+ +FTPDQ +GI+RFV   A+P L F  IS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMILAYGSVRWWRIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
           SN+   +N K  AADSLQK++ LAALFLW+      SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  SNDPYAMNYKFIAADSLQKVVILAALFLWQTFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGG---------- 180
             AMYG  S   M+Q +V Q+ IW  +++ +FEYR A+++++ +     G          
Sbjct: 121 LKAMYGNDSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQFPETAGSITSFRVDSD 180

Query: 181 LVDLNGLKQVFPDKTEVSVG 191
           +V LNG +   P +T+  +G
Sbjct: 181 VVSLNGRE---PLQTDAEIG 197

BLAST of CSPI02G07240 vs. NCBI nr
Match: gi|147783579|emb|CAN70111.1| (hypothetical protein VITISV_032889 [Vitis vinifera])

HSP 1 Score: 179.9 bits (455), Expect = 5.7e-42
Identity = 89/197 (45.18%), Postives = 132/197 (67.01%), Query Frame = 1

Query: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60
           MI GKD+ ++L+AIVP+Y  + +AY +VRW+ +FTP+Q AGI+RFV   A+P L F  IS
Sbjct: 1   MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120
            N++  +N K  AADSLQK++ L+ALFLW+    N SL+WMITLFSLS+LPNTL++G+P+
Sbjct: 61  LNDIYNMNYKFIAADSLQKIVILSALFLWQAFAKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGLV-------D 180
             AMYG  S   M+Q +V Q+ IW  +++ +FEYR A++++  +     G +       D
Sbjct: 121 LKAMYGDFSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVESD 180

Query: 181 LNGLKQVFPDKTEVSVG 191
           +  L    P +T+  +G
Sbjct: 181 VMSLNGREPLETDAEIG 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PIN2_ARATH5.7e-4244.50Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2[more]
PIN1C_ORYSJ9.2e-4043.65Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PI... [more]
PINI_ARATH1.6e-3946.59Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1[more]
PIN3A_ORYSJ2.7e-3944.17Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PI... [more]
PIN2_ORYSJ1.7e-3841.38Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN... [more]
Match NameE-valueIdentityDescription
A0A0A0LH32_CUCSA3.9e-13096.92Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074260 PE=4 SV=1[more]
A5BFN9_VITVI4.0e-4245.18Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032889 PE=4 SV=1[more]
F6GXI9_VITVI4.0e-4245.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00440 PE=4 SV=... [more]
V7AZN4_PHAVU2.0e-4144.83Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G234200g PE=4 SV=1[more]
A0A118K778_CYNCS2.6e-4146.00Auxin efflux carrier OS=Cynara cardunculus var. scolymus GN=Ccrd_009752 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G57090.13.2e-4344.50 Auxin efflux carrier family protein[more]
AT1G73590.18.8e-4146.59 Auxin efflux carrier family protein[more]
AT1G23080.11.7e-3941.35 Auxin efflux carrier family protein[more]
AT2G01420.23.7e-3941.35 Auxin efflux carrier family protein[more]
AT1G70940.16.3e-3940.87 Auxin efflux carrier family protein[more]
Match NameE-valueIdentityDescription
gi|700206146|gb|KGN61265.1|5.6e-13096.92hypothetical protein Csa_2G074260 [Cucumis sativus][more]
gi|778674092|ref|XP_011650130.1|3.4e-12792.31PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus][more]
gi|659082635|ref|XP_008441950.1|1.9e-11788.59PREDICTED: probable auxin efflux carrier component 2 [Cucumis melo][more]
gi|1009176488|ref|XP_015869455.1|4.4e-4246.00PREDICTED: auxin efflux carrier component 2 [Ziziphus jujuba][more]
gi|147783579|emb|CAN70111.1|5.7e-4245.18hypothetical protein VITISV_032889 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004776Mem_trans
Vocabulary: Biological Process
TermDefinition
GO:0010315auxin efflux
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0010329auxin efflux transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010315 auxin efflux
biological_process GO:0007275 multicellular organism development
biological_process GO:0009416 response to light stimulus
biological_process GO:0055085 transmembrane transport
biological_process GO:0048513 animal organ development
biological_process GO:0010252 auxin homeostasis
biological_process GO:0009926 auxin polar transport
biological_process GO:0009791 post-embryonic development
biological_process GO:0009605 response to external stimulus
biological_process GO:0009733 response to auxin
cellular_component GO:0044464 cell part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
molecular_function GO:0010329 auxin efflux transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G07240.1CSPI02G07240.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 10..166
score: 1.1
NoneNo IPR availablePANTHERPTHR31752FAMILY NOT NAMEDcoord: 2..162
score: 5.2