Carg19687 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGGTTCTTGCTGGTGGCTGCTTTTGCAGAGTCCGCCGCCGTCGACGCCGCCGTGGATGAAGTGATTCAACTAGTTTCTGATGGAGGGAATGATTTCCCAAGAAAGATGATGAACGGTGCCCAAGGTTGCCCTAGAATCCTTATGCCCTGCAAAGTGGATTCTGACTGCTTTCCTACTTGCAAATGCCGGTCCAACGGCTACGGTGGTTGAAGCTCCGCCGTGTCGGTTAATGTGACACCCGAGTAAAGGAGGAATGCATAAATAAATCGAGAGTACATCAGATGAGAGAGATTTGAAGGATAAGTCACTACCTGACTCAATCCTAAGAACTTCATGGTTAAATATGTTTTGTTTAAAGCAGACTTTTAGATAATTTTTATAAGATTTATGTGAGTAAGGACAAAACATGCCGATAAGAAATCAAATTGGTCCATATGAATAGTTTTCACTTTTAGAAGCCCCAACCAAATGTTGGGGTACATAGGTGTTCGAGTTTGACTTGAAAGTTCATTTTTTTTTTTGTTAATCAAATTTGTAAATATTCACCCCCAAAATTAGATGTGTAACAACCAAAAACGAACACTACCAGATATTATCTTATTTGGACTTTCACTCTCGATGTCCTTTTTGAGCTTTTCCTCTCATACTTCCTCTCAACGTTTTAAAACGCGTTTTATGGGGAGAAATTTTCACACCCTTAAAAGGACGCTGACGGGCTCTGATACCATTTGTAACAGTTCAAACCCACCGCTAACATATATGGTTCTCTACGAGCTTCTTTTCAAAATTTTAAAACACGTCTATTAAAAAAAGATTTACAGGACCTTATAATGGGTCTATACCAATTTGGTCTTAAAAGAATGTTGAGAGTTATTTTTTAAAATAAAAAAGCAATATATTATTATTTTTTTAATAATATAGGCATTAGAAAAATGAATAATTTAGTGGTACAATAATTCACCCACCACGTGTTATCCCTGTTAATTACATTTATTATATTTTTCTGAAATTAATGGCGAGAAATTGACGATATATTAAGGAGATTTTGAAGTTATATATTTCCATTTGCTTTTTTCATCGCAATTTAATTAATTAAATATTGAATAAAAGTAGCCGTTGATCTCTATAAATAGAGAGAGTTAAAGGGATAATGGGCAACAAAAGAGAGAAAATGGAGTGGAAAAGAGGTGCTTTAATTGCCATGGTGGGGCTGTTGCTGATGGCGGCTTTTGCAGAGTCCGCCGCCGTCCACGGCGGTGAAGTGATTCAGCTAGTTTCCGACGGAGTGAATGATTTCCCAAGGAAGATGATGAACGGTGCCCTAGGTTGCCCTAGAATCCTTATGGAGTGCGAAGTGGATTCCGACTGCCTTCCTGGTTGCATATGCCGGCCCAACGGCTTCTGTGGTTGA ATGGTGGGGTTCTTGCTGGTGGCTGCTTTTGCAGAGTCCGCCGCCGTCGACGCCGCCGTGGATGAAGTGATTCAACTAGTTTCTGATGGAGGGAATGATTTCCCAAGAAAGATGATGAACGGTGCCCAAGGTTGCCCTAGAATCCTTATGCCCTGCAAAGTGGATTCTGACTGCTTTCCTACTTGCAAATGCCGGTCCAACGGCTACGAGAGAGTTAAAGGGATAATGGGCAACAAAAGAGAGAAAATGGAGTGGAAAAGAGGTGCTTTAATTGCCATGGTGGGGCTGTTGCTGATGGCGGCTTTTGCAGAGTCCGCCGCCGTCCACGGCGGTGAAGTGATTCAGCTAGTTTCCGACGGAGTGAATGATTTCCCAAGGAAGATGATGAACGGTGCCCTAGGTTGCCCTAGAATCCTTATGGAGTGCGAAGTGGATTCCGACTGCCTTCCTGGTTGCATATGCCGGCCCAACGGCTTCTGTGGTTGA ATGGTGGGGTTCTTGCTGGTGGCTGCTTTTGCAGAGTCCGCCGCCGTCGACGCCGCCGTGGATGAAGTGATTCAACTAGTTTCTGATGGAGGGAATGATTTCCCAAGAAAGATGATGAACGGTGCCCAAGGTTGCCCTAGAATCCTTATGCCCTGCAAAGTGGATTCTGACTGCTTTCCTACTTGCAAATGCCGGTCCAACGGCTACGAGAGAGTTAAAGGGATAATGGGCAACAAAAGAGAGAAAATGGAGTGGAAAAGAGGTGCTTTAATTGCCATGGTGGGGCTGTTGCTGATGGCGGCTTTTGCAGAGTCCGCCGCCGTCCACGGCGGTGAAGTGATTCAGCTAGTTTCCGACGGAGTGAATGATTTCCCAAGGAAGATGATGAACGGTGCCCTAGGTTGCCCTAGAATCCTTATGGAGTGCGAAGTGGATTCCGACTGCCTTCCTGGTTGCATATGCCGGCCCAACGGCTTCTGTGGTTGA MVGFLLVAAFAESAAVDAAVDEVIQLVSDGGNDFPRKMMNGAQGCPRILMPCKVDSDCFPTCKCRSNGYERVKGIMGNKREKMEWKRGALIAMVGLLLMAAFAESAAVHGGEVIQLVSDGVNDFPRKMMNGALGCPRILMECEVDSDCLPGCICRPNGFCG
BLAST of Carg19687 vs. NCBI nr
Match: XP_023552845.1 (uncharacterized protein LOC111810370 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63 Identity = 127/161 (78.88%), Postives = 133/161 (82.61%), Query Frame = 0
BLAST of Carg19687 vs. NCBI nr
Match: XP_022984819.1 (trypsin inhibitor 1-like [Cucurbita maxima]) HSP 1 Score: 164.1 bits (414), Expect = 4.0e-37 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Carg19687 vs. NCBI nr
Match: XP_011654311.1 (PREDICTED: uncharacterized protein LOC105435333 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 2.6e-20 Identity = 77/205 (37.56%), Postives = 93/205 (45.37%), Query Frame = 0
BLAST of Carg19687 vs. NCBI nr
Match: KGN52761.1 (Trypsin inhibitor 1 [Cucumis sativus]) HSP 1 Score: 100.5 bits (249), Expect = 5.4e-18 Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of Carg19687 vs. NCBI nr
Match: Q43667.1 (RecName: Full=Trypsin inhibitor 1; AltName: Full=TTII; AltName: Full=Trypsin inhibitor I; Flags: Precursor >CAA57704.1 Trichosanthes trypsin inhibitor-I [Trichosanthes kirilowii]) HSP 1 Score: 89.0 bits (219), Expect = 1.6e-14 Identity = 41/63 (65.08%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Carg19687 vs. Swiss-Prot
Match: sp|Q43667|ITR1_TRIKI (Trypsin inhibitor 1 OS=Trichosanthes kirilowii OX=3677 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.3e-17 Identity = 41/63 (65.08%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Carg19687 vs. Swiss-Prot
Match: sp|P34950|ITR5_LUFAE (Trypsin inhibitor 5 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.5e-15 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of Carg19687 vs. Swiss-Prot
Match: sp|P12071|ITR2_ECBEL (Trypsin inhibitor 2 OS=Ecballium elaterium OX=3679 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 5.9e-08 Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Carg19687 vs. Swiss-Prot
Match: sp|P11968|ITR2_BRYDI (Trypsin inhibitor 2 OS=Bryonia dioica OX=3652 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.5e-07 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Carg19687 vs. Swiss-Prot
Match: sp|P83395|ITR4_CYCPE (Trypsin inhibitor 4 OS=Cyclanthera pedata OX=198836 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 0
BLAST of Carg19687 vs. TrEMBL
Match: tr|A0A0A0KY34|A0A0A0KY34_CUCSA (Trypsin inhibitor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G000810 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.6e-18 Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of Carg19687 vs. TrEMBL
Match: tr|A0A0A0KT01|A0A0A0KT01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000805 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.4e-11 Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of Carg19687 vs. TrEMBL
Match: tr|A0A0A7HF33|A0A0A7HF33_9ROSI (TIPRE2 (Fragment) OS=Momordica anigosantha OX=703354 GN=TIPRE2 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.6e-08 Identity = 45/168 (26.79%), Postives = 66/168 (39.29%), Query Frame = 0
BLAST of Carg19687 vs. TrEMBL
Match: tr|A0A0A7HF94|A0A0A7HF94_9ROSI (TIPRE3 (Fragment) OS=Momordica anigosantha OX=703354 GN=TIPRE3 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08 Identity = 46/169 (27.22%), Postives = 67/169 (39.64%), Query Frame = 0
BLAST of Carg19687 vs. TrEMBL
Match: tr|A0A0A7HIT2|A0A0A7HIT2_9ROSI (TIPRE4 (Fragment) OS=Momordica anigosantha OX=703354 GN=TIPRE4 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.3e-07 Identity = 49/191 (25.65%), Postives = 79/191 (41.36%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |