Carg19490 (gene) Silver-seed gourd

Overview
NameCarg19490
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box/kelch-repeat protein SKIP25
LocationCucurbita_argyrosperma_scaffold_204 : 455766 .. 456887 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCACCGCCGCTGCTCCCACCCCCAAGCGCAGTAAACTGGCTCTCCACCATCACCACCACCGCCACCGCCCCTCTCCGCCGCTTCTCCCGGGGCTCCCCGATGACGTGGCACAACTCTGCCTCTGCCATCTTCCTCCTTCCCTCCTCTTCTCCGTCTGCCGGTCATGGCGGCGCCTCCTTTACTCCCCTTCTTTCCCTCCGTTCTTCTCCCTCTACGCCCTTCTCTCCTCCTCCCCTGATTCCATCGATTTCTTCAACTTCGATCCAATCTCTTCCAAATGGACCTCTCTCCCTCCACATCCTAATCCCCCCTCTCTACAGCTCTTGATCCACCACCCCTCTTTCCTCTCCCGCCACCTCCCCGTTCAGTCCCTCGCCGTCTCCGGCCACCTCCTCCTCCTAGCCGCCACCACCCACAACCTCCTCCCCGCCCTTCCTCGCCCTCTCCTCTTTTCCCCTCTTTCTAATTCCTGGCGTTTCGCCCCTCCTCTCCCCACCCCTCGCCGCTGGTGCGCTGCCGGCGCTCTCCGCGGCTCCGTCTATGTCGCCAGTGGAATCGGCTCCTTCTTCTCCACCGATGTCGCTCGATCCGTCGAGAGATGGGATTTGAAACCAATCGACGGTGGCGCGTGGGAGAAGGTGAGTGGACTTAAGGATGGGAGATTTAGCAGAGACGCCACTGATGCTGTGGGGTGGAGGGGGAAGCTCTGTATGGTGAATGTGAAAGGGGATGCGCGGAAAGAAGGGTTGGTTTATGATTTGGAAAGGGATGAGTGGGAGGAGATGTCGGAGGGGATGATCGGAGGTTGGAGAGGGCCGGTGGCGACCATGGAGGAGGAAGAGATGTATGTGGTGGATGAAGTCACCGGAAGTCTGAGAAGGTATGATCCGGAAAGGGATTTCTGGGAAGAGGTAACGGAGTCAAATCGGCTGAAAGGGGCGGTTCAGATGGCGGCCGGCGGCGGCAGAGTATGCGTGGTGTGCAGCGGAAGTAGAAGGGAAATCGTGGTGGTGGATGTGGTAGCGTCGCCACCGCGGCTGTGGGTTGAGGCGACGCCGCCGGGGATGGAGGTGGTCGCCGTCCACGTGCTGCCCAGAATGAGTGCCTCAAAGTCATGA

mRNA sequence

ATGGTCACCGCCGCTGCTCCCACCCCCAAGCGCAGTAAACTGGCTCTCCACCATCACCACCACCGCCACCGCCCCTCTCCGCCGCTTCTCCCGGGGCTCCCCGATGACGTGGCACAACTCTGCCTCTGCCATCTTCCTCCTTCCCTCCTCTTCTCCGTCTGCCGGTCATGGCGGCGCCTCCTTTACTCCCCTTCTTTCCCTCCGTTCTTCTCCCTCTACGCCCTTCTCTCCTCCTCCCCTGATTCCATCGATTTCTTCAACTTCGATCCAATCTCTTCCAAATGGACCTCTCTCCCTCCACATCCTAATCCCCCCTCTCTACAGCTCTTGATCCACCACCCCTCTTTCCTCTCCCGCCACCTCCCCGTTCAGTCCCTCGCCGTCTCCGGCCACCTCCTCCTCCTAGCCGCCACCACCCACAACCTCCTCCCCGCCCTTCCTCGCCCTCTCCTCTTTTCCCCTCTTTCTAATTCCTGGCGTTTCGCCCCTCCTCTCCCCACCCCTCGCCGCTGGTGCGCTGCCGGCGCTCTCCGCGGCTCCGTCTATGTCGCCAGTGGAATCGGCTCCTTCTTCTCCACCGATGTCGCTCGATCCGTCGAGAGATGGGATTTGAAACCAATCGACGGTGGCGCGTGGGAGAAGGTGAGTGGACTTAAGGATGGGAGATTTAGCAGAGACGCCACTGATGCTGTGGGGTGGAGGGGGAAGCTCTGTATGGTGAATGTGAAAGGGGATGCGCGGAAAGAAGGGTTGGTTTATGATTTGGAAAGGGATGAGTGGGAGGAGATGTCGGAGGGGATGATCGGAGGTTGGAGAGGGCCGGTGGCGACCATGGAGGAGGAAGAGATGTATGTGGTGGATGAAGTCACCGGAAGTCTGAGAAGGTATGATCCGGAAAGGGATTTCTGGGAAGAGGTAACGGAGTCAAATCGGCTGAAAGGGGCGGTTCAGATGGCGGCCGGCGGCGGCAGAGTATGCGTGGTGTGCAGCGGAAGTAGAAGGGAAATCGTGGTGGTGGATGTGGTAGCGTCGCCACCGCGGCTGTGGGTTGAGGCGACGCCGCCGGGGATGGAGGTGGTCGCCGTCCACGTGCTGCCCAGAATGAGTGCCTCAAAGTCATGA

Coding sequence (CDS)

ATGGTCACCGCCGCTGCTCCCACCCCCAAGCGCAGTAAACTGGCTCTCCACCATCACCACCACCGCCACCGCCCCTCTCCGCCGCTTCTCCCGGGGCTCCCCGATGACGTGGCACAACTCTGCCTCTGCCATCTTCCTCCTTCCCTCCTCTTCTCCGTCTGCCGGTCATGGCGGCGCCTCCTTTACTCCCCTTCTTTCCCTCCGTTCTTCTCCCTCTACGCCCTTCTCTCCTCCTCCCCTGATTCCATCGATTTCTTCAACTTCGATCCAATCTCTTCCAAATGGACCTCTCTCCCTCCACATCCTAATCCCCCCTCTCTACAGCTCTTGATCCACCACCCCTCTTTCCTCTCCCGCCACCTCCCCGTTCAGTCCCTCGCCGTCTCCGGCCACCTCCTCCTCCTAGCCGCCACCACCCACAACCTCCTCCCCGCCCTTCCTCGCCCTCTCCTCTTTTCCCCTCTTTCTAATTCCTGGCGTTTCGCCCCTCCTCTCCCCACCCCTCGCCGCTGGTGCGCTGCCGGCGCTCTCCGCGGCTCCGTCTATGTCGCCAGTGGAATCGGCTCCTTCTTCTCCACCGATGTCGCTCGATCCGTCGAGAGATGGGATTTGAAACCAATCGACGGTGGCGCGTGGGAGAAGGTGAGTGGACTTAAGGATGGGAGATTTAGCAGAGACGCCACTGATGCTGTGGGGTGGAGGGGGAAGCTCTGTATGGTGAATGTGAAAGGGGATGCGCGGAAAGAAGGGTTGGTTTATGATTTGGAAAGGGATGAGTGGGAGGAGATGTCGGAGGGGATGATCGGAGGTTGGAGAGGGCCGGTGGCGACCATGGAGGAGGAAGAGATGTATGTGGTGGATGAAGTCACCGGAAGTCTGAGAAGGTATGATCCGGAAAGGGATTTCTGGGAAGAGGTAACGGAGTCAAATCGGCTGAAAGGGGCGGTTCAGATGGCGGCCGGCGGCGGCAGAGTATGCGTGGTGTGCAGCGGAAGTAGAAGGGAAATCGTGGTGGTGGATGTGGTAGCGTCGCCACCGCGGCTGTGGGTTGAGGCGACGCCGCCGGGGATGGAGGTGGTCGCCGTCCACGTGCTGCCCAGAATGAGTGCCTCAAAGTCATGA

Protein sequence

MVTAAAPTPKRSKLALHHHHHRHRPSPPLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDPERDFWEEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMSASKS
Homology
[Close]
BLAST of Carg19490 vs. NCBI nr
Match: XP_022923249.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita moschata])

HSP 1 Score: 681.8 bits (1758), Expect = 1.3e-192
Identity = 372/373 (99.73%), Postives = 372/373 (99.73%), Query Frame = 0 

Query: 1   MVTAAAXXXXXXXXXXXXXXXXXXXXXPLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRL 60
           MVTAAAXXXXXXXXXXXXXXXXXXXXXPLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRL
Sbjct: 1   MVTAAAXXXXXXXXXXXXXXXXXXXXXPLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRL 60

Query: 61  LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH 120
           LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH
Sbjct: 61  LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH 120

Query: 121 LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGS 180
           LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGS
Sbjct: 121 LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGS 180

Query: 181 VYVASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV 240
           VYVASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV
Sbjct: 181 VYVASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV 240

Query: 241 NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXX 300
           NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXX
Sbjct: 241 NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXX 300

Query: 301 XXXXXXTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV 360
           XXXXXXTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV
Sbjct: 301 XXXXXXTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV 360

Query: 361 AVHVLPRMSASKS 374
           AVHVLPRMSA KS
Sbjct: 361 AVHVLPRMSAPKS 373

[Close]
BLAST of Carg19490 vs. NCBI nr
Match: XP_023552710.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673.3 bits (1736), Expect = 4.7e-190
Identity = 347/373 (93.03%), Postives = 349/373 (93.57%), Query Frame = 0 

Query: 1   MVTAAAXXXXXXXXXXXXXXXXXXXXXPLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRL 60
           MVTAAA                     PLLPGLPDDVAQLCL HLPPSLLFSVCRSWRRL
Sbjct: 1   MVTAAAPTPKRSKLALHPQHHHNRPSPPLLPGLPDDVAQLCLSHLPPSLLFSVCRSWRRL 60

Query: 61  LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH 120
           LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH
Sbjct: 61  LYSPSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRH 120

Query: 121 LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGS 180
           LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWR APPLPTPRRWCAAG+LRGS
Sbjct: 121 LPVQSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRLAPPLPTPRRWCAAGSLRGS 180

Query: 181 VYVASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV 240
           VYVASGIGSFFSTDVARSVERWDLKP+DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV
Sbjct: 181 VYVASGIGSFFSTDVARSVERWDLKPMDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMV 240

Query: 241 NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXX 300
           NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXX
Sbjct: 241 NVKGDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXX 300

Query: 301 XXXXXXTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV 360
           XXXXXXTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV
Sbjct: 301 XXXXXXTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVV 360

Query: 361 AVHVLPRMSASKS 374
           AVHVLPRMSA KS
Sbjct: 361 AVHVLPRMSAPKS 373

[Close]
BLAST of Carg19490 vs. NCBI nr
Match: XP_022965312.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita maxima])

HSP 1 Score: 671.8 bits (1732), Expect = 1.4e-189
Identity = 341/346 (98.55%), Postives = 343/346 (99.13%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN 87
           PLLPGLPDDVAQLCL HLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN
Sbjct: 26  PLLPGLPDDVAQLCLSHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN 85

Query: 88  FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP 147
           FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP
Sbjct: 86  FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP 145

Query: 148 RPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPI 207
           RPLLFSPLSNSWRFAPPLPTPRRWCAAG+LRGSVYVASGIGSFFSTDVARSVERWDLKPI
Sbjct: 146 RPLLFSPLSNSWRFAPPLPTPRRWCAAGSLRGSVYVASGIGSFFSTDVARSVERWDLKPI 205

Query: 208 DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGM 267
           DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGM
Sbjct: 206 DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGM 265

Query: 268 IGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGRVCV 327
           IGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGRVCV
Sbjct: 266 IGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGRVCV 325

Query: 328 VCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMSASKS 374
           VCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS  +S
Sbjct: 326 VCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMSTPRS 371

[Close]
BLAST of Carg19490 vs. NCBI nr
Match: XP_008448576.1 (PREDICTED: F-box/kelch-repeat protein SKIP25 [Cucumis melo])

HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163
Identity = 290/342 (84.80%), Postives = 302/342 (88.30%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN 87
           PLLPGLPD VAQ CL H+PPSLLFSV RSWRRLLYSPSFPPF SLYALLSSS +S+DFFN
Sbjct: 29  PLLPGLPDHVAQFCLSHVPPSLLFSVSRSWRRLLYSPSFPPFSSLYALLSSSSNSLDFFN 88

Query: 88  FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP 147
           FDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPVQSL+VSGHLLLLAATTHNLLPALP
Sbjct: 89  FDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLSVSGHLLLLAATTHNLLPALP 148

Query: 148 RPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPI 207
           RPLLFSP SNSWR APPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLK  
Sbjct: 149 RPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKAN 208

Query: 208 DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGM 267
             G WEKVSGLKDGRFSRDA DAVGW+GKLCMVNVKG A KEGLVYDLE+DEWE+M EGM
Sbjct: 209 GAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVKGHALKEGLVYDLEKDEWEDMPEGM 268

Query: 268 IGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGRVCV 327
           IGGWRGP A M+EE+MYVVDEV+GSLRRY           ESNRLKGAVQMAAGGGRVCV
Sbjct: 269 IGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFWEDVMESNRLKGAVQMAAGGGRVCV 328

Query: 328 VCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS 370
           VC GSR EIVVVDVVASP RLWVE TPPG EVVAVHVLPRM+
Sbjct: 329 VCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVHVLPRMN 370

[Close]
BLAST of Carg19490 vs. NCBI nr
Match: XP_022937163.1 (F-box/kelch-repeat protein SKIP25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 574.3 bits (1479), Expect = 3.0e-160
Identity = 289/349 (82.81%), Postives = 303/349 (86.82%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN 87
           PLLPGLPD VAQLCL  LPPSLLFSV RSWRRL+YSP+FPPFFS+YALLSSSP+S+DFF 
Sbjct: 39  PLLPGLPDHVAQLCLSRLPPSLLFSVSRSWRRLIYSPAFPPFFSIYALLSSSPNSLDFFT 98

Query: 88  FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP 147
           FDPISSKW  LPP PNPP L L+IHHPSFLSRHLPVQSLAVSGHLLLLAATT NLLPALP
Sbjct: 99  FDPISSKWNRLPPPPNPPPLDLMIHHPSFLSRHLPVQSLAVSGHLLLLAATTQNLLPALP 158

Query: 148 RPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPI 207
           RPL+FSP+SNSW+F PPL TPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLK  
Sbjct: 159 RPLIFSPVSNSWQFGPPLITPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKKP 218

Query: 208 DGGA---WEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMS 267
            GG    WEKVSGLKD RFSRDA DAVGWRGKLCMVNVKGDA KEGLVYDLERD WEEM 
Sbjct: 219 RGGGGGDWEKVSGLKDRRFSRDAIDAVGWRGKLCMVNVKGDAPKEGLVYDLERDLWEEMP 278

Query: 268 EGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGR 327
           EGM+GGWRGPVA M+EEEMYVVDE  G LRRY           +SNRLKGAVQMAAGGGR
Sbjct: 279 EGMVGGWRGPVAAMDEEEMYVVDEGGGCLRRYNPVGDLWEQVIQSNRLKGAVQMAAGGGR 338

Query: 328 VCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMSASKS 374
           VC+VC GSR EIVVVDVVASPP L VE TPPGMEVVAVHVLPRMSA +S
Sbjct: 339 VCIVCGGSRGEIVVVDVVASPPWLRVEPTPPGMEVVAVHVLPRMSAPES 387

[Close]
BLAST of Carg19490 vs. TAIR10
Match: AT1G31350.1 (KAR-UP F-box 1)

HSP 1 Score: 314.7 bits (805), Expect = 7.7e-86
Identity = 173/358 (48.32%), Postives = 229/358 (63.97%), Query Frame = 0 

Query: 29  LLPGLPDDVAQLCLCHL-PPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPD------ 88
           L+ GLPD ++++CL  +  PSLL +VC  WRRLLYSP FP F SLYAL   S        
Sbjct: 35  LIEGLPDHISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDSTSDTGRVN 94

Query: 89  -SIDFFNFDPISSKWTSLP-PHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATT 148
            S+ F  F+P+SSKW  LP      P  ++L  HPSF+S +LP+Q ++ +G L+L+A + 
Sbjct: 95  PSVRFMCFNPVSSKWYPLPXXXXXXPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSN 154

Query: 149 HNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSV 208
             L PA+  PL+F P+S+SW   P + +PRRWCA GA  G++Y+ASGI S FS+ VA+SV
Sbjct: 155 QQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFSSTVAKSV 214

Query: 209 ERWDLKPIDGG----AWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDL 268
           E+ DL   +       WEK+  ++D RFSR+A DAVG+R KL MVNVKGDA KEG +YD+
Sbjct: 215 EKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNVKGDAVKEGAIYDV 274

Query: 269 ERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXT----ESNR 328
            +D+WE M E M+ GWRGPVA MEEE +Y VDE  G++R+Y                   
Sbjct: 275 VKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKREWREVVVVEGGEEM 334

Query: 329 LKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS 370
           LKGA Q+ A  G++CVV    +  IVVVDV A P ++W    P G+E V+VHVLPRMS
Sbjct: 335 LKGATQVTADSGKLCVVTGDGK--IVVVDVAAEPAKIWNVEIPDGLEPVSVHVLPRMS 390

[Close]
BLAST of Carg19490 vs. TAIR10
Match: AT2G24540.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-14
Identity = 78/283 (27.56%), Postives = 118/283 (41.70%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLP---PSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSP---- 87
           PL+ GLP+D+A+LCL  LP    +L  SV  SW + + +P F   FS  +L  SSP    
Sbjct: 27  PLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRF--LFSKQSLSISSPYLFV 86

Query: 88  -------DSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLL 147
                    I + + D  S +W  LPP PN  +    I  P  LS      S+   G L 
Sbjct: 87  FAFNKSTARIQWQSLDLASGRWFVLPPMPNSFT---KISSPHALS----CASMPRQGKLF 146

Query: 148 LLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASG-IGSFFS 207
           +L     N        ++++ L+N W    P+ +PR +  +G + G +    G +G   +
Sbjct: 147 VLGGGDVN-----RSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGG--N 206

Query: 208 TDVARSVERWDLKPIDGGAWEKVSGL-------KDGRFSRDATDAVGWRGKLCMVNVKGD 267
            +    VE +D    D   W  V  L             ++     GW        +   
Sbjct: 207 GEATTEVESYD---PDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPM--- 266

Query: 268 ARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDE 289
               G VYD +   W EMS GM  GW G V+ +  + ++V+ E
Sbjct: 267 ----GQVYDSDEGTWREMSGGMKEGWTG-VSVVIRDRLFVISE 282

[Close]
BLAST of Carg19490 vs. TAIR10
Match: AT1G30090.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 70/279 (25.09%), Postives = 105/279 (37.63%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLF---SVCRSWRRLLYSP----------SFPPFFSLYA 87
           PL+PGLPDDVA  CL  +P        SVC+ W  L  +            F   +    
Sbjct: 52  PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVV 111

Query: 88  LLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLL 147
             S     I +   D  +  W  +P  P     +  +    F S  +P +     G + +
Sbjct: 112 GFSRCTGKIQWKVLDLRNLTWHEIPAMP----CRDKVCPHGFRSVSMPRE-----GTMFV 171

Query: 148 LAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASG-IGSFFST 207
                 +    L   L +  + N W     + T R + A+G + G +Y A G     +  
Sbjct: 172 CGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYEL 231

Query: 208 DVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVN---VKGDARKEG 267
           D A       L P+DG  W  VS +     S D        GKL +             G
Sbjct: 232 DCAEV-----LNPLDGN-WRPVSNMVAHMASYDTAVL---NGKLLVTEGWLWPFFVSPRG 291

Query: 268 LVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEV 290
            VYD   D+WE MS G+  GW G  + +  + +++V E+
Sbjct: 292 QVYDPRTDQWETMSMGLREGWTG-TSVVIYDRLFIVSEL 311

[Close]
BLAST of Carg19490 vs. TAIR10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 78/324 (24.07%), Postives = 118/324 (36.42%), Query Frame = 0 

Query: 29  LLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFS-----------LYALLS 88
           L+P LPD+++   L  LP     SV    RR   + S    +S           LY L  
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 89  SSPDSIDFFNFDPISSKWTSLPPHP------------------NPPSLQLLIHHPSFLSR 148
              D + ++  DP+S+KW  LPP P                    PS  +     SFL R
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 149 HLPVQSL--------AVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRW 208
               + +        AV G L ++   + +    +     F P+ NSW     +   R +
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRS--KTVSCVWRFDPILNSWSEVSSMLASRAY 222

Query: 209 CAAGALRGSVYVASGIG-SFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGR-------F 268
              G L   +YV  G+          +S E +D       AW +V  +   +       F
Sbjct: 223 SKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPST---DAWSEVPSMPFSKAQVLPNAF 282

Query: 269 SRD-----ATDAVGWRGKLCM----------VNVKGDARKEGLVYDLERDEWEEMSEGMI 288
             D     AT    + G+LC+          V+V G+      VYD E + W EM  GM 
Sbjct: 283 LADLLKPIATGMTCYNGRLCVPQSLYSWPFFVDVGGE------VYDPETNLWVEMPSGMG 342

[Close]
BLAST of Carg19490 vs. TAIR10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 7.9e-06
Identity = 49/158 (31.01%), Postives = 67/158 (42.41%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPS---LLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPD--- 87
           PLLPGLPDD+A  CL  +P +    L  VC+ W RL  S +F  F+S   LL  S +   
Sbjct: 77  PLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLA-SGNF--FYSQRKLLGMSEEWVY 136

Query: 88  --------SIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLL 147
                    I +  FDPIS  W  LPP P               S  +      +SG  L
Sbjct: 137 VFKRDRDGKISWNTFDPISQLWQPLPPVPRE------------YSEAVGFGCAVLSGCHL 196

Query: 148 LLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRW 172
            L      L  ++ R + ++  +N W  AP +   R +
Sbjct: 197 YLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHF 219

[Close]
BLAST of Carg19490 vs. Swiss-Prot
Match: sp|Q8GX29|SKI25_ARATH (F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-84
Identity = 173/358 (48.32%), Postives = 229/358 (63.97%), Query Frame = 0 

Query: 29  LLPGLPDDVAQLCLCHL-PPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPD------ 88
           L+ GLPD ++++CL  +  PSLL +VC  WRRLLYSP FP F SLYAL   S        
Sbjct: 35  LIEGLPDHISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDSTSDTGRVN 94

Query: 89  -SIDFFNFDPISSKWTSLP-PHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATT 148
            S+ F  F+P+SSKW  LP      P  ++L  HPSF+S +LP+Q ++ +G L+L+A + 
Sbjct: 95  PSVRFMCFNPVSSKWYPLPXXXXXXPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSN 154

Query: 149 HNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSV 208
             L PA+  PL+F P+S+SW   P + +PRRWCA GA  G++Y+ASGI S FS+ VA+SV
Sbjct: 155 QQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFSSTVAKSV 214

Query: 209 ERWDLKPIDGG----AWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDL 268
           E+ DL   +       WEK+  ++D RFSR+A DAVG+R KL MVNVKGDA KEG +YD+
Sbjct: 215 EKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNVKGDAVKEGAIYDV 274

Query: 269 ERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXT----ESNR 328
            +D+WE M E M+ GWRGPVA MEEE +Y VDE  G++R+Y                   
Sbjct: 275 VKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKREWREVVVVEGGEEM 334

Query: 329 LKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS 370
           LKGA Q+ A  G++CVV    +  IVVVDV A P ++W    P G+E V+VHVLPRMS
Sbjct: 335 LKGATQVTADSGKLCVVTGDGK--IVVVDVAAEPAKIWNVEIPDGLEPVSVHVLPRMS 390

[Close]
BLAST of Carg19490 vs. Swiss-Prot
Match: sp|Q8LAW2|AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana OX=3702 GN=AFR PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-13
Identity = 78/283 (27.56%), Postives = 118/283 (41.70%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLP---PSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSP---- 87
           PL+ GLP+D+A+LCL  LP    +L  SV  SW + + +P F   FS  +L  SSP    
Sbjct: 27  PLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRF--LFSKQSLSISSPYLFV 86

Query: 88  -------DSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLL 147
                    I + + D  S +W  LPP PN  +    I  P  LS      S+   G L 
Sbjct: 87  FAFNKSTARIQWQSLDLASGRWFVLPPMPNSFT---KISSPHALS----CASMPRQGKLF 146

Query: 148 LLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASG-IGSFFS 207
           +L     N        ++++ L+N W    P+ +PR +  +G + G +    G +G   +
Sbjct: 147 VLGGGDVN-----RSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGG--N 206

Query: 208 TDVARSVERWDLKPIDGGAWEKVSGL-------KDGRFSRDATDAVGWRGKLCMVNVKGD 267
            +    VE +D    D   W  V  L             ++     GW        +   
Sbjct: 207 GEATTEVESYD---PDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPM--- 266

Query: 268 ARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDE 289
               G VYD +   W EMS GM  GW G V+ +  + ++V+ E
Sbjct: 267 ----GQVYDSDEGTWREMSGGMKEGWTG-VSVVIRDRLFVISE 282

[Close]
BLAST of Carg19490 vs. Swiss-Prot
Match: sp|Q9C6Z0|FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.2e-07
Identity = 70/279 (25.09%), Postives = 105/279 (37.63%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLF---SVCRSWRRLLYSP----------SFPPFFSLYA 87
           PL+PGLPDDVA  CL  +P        SVC+ W  L  +            F   +    
Sbjct: 52  PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVV 111

Query: 88  LLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLL 147
             S     I +   D  +  W  +P  P     +  +    F S  +P +     G + +
Sbjct: 112 GFSRCTGKIQWKVLDLRNLTWHEIPAMP----CRDKVCPHGFRSVSMPRE-----GTMFV 171

Query: 148 LAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASG-IGSFFST 207
                 +    L   L +  + N W     + T R + A+G + G +Y A G     +  
Sbjct: 172 CGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYEL 231

Query: 208 DVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVN---VKGDARKEG 267
           D A       L P+DG  W  VS +     S D        GKL +             G
Sbjct: 232 DCAEV-----LNPLDGN-WRPVSNMVAHMASYDTAVL---NGKLLVTEGWLWPFFVSPRG 291

Query: 268 LVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEV 290
            VYD   D+WE MS G+  GW G  + +  + +++V E+
Sbjct: 292 QVYDPRTDQWETMSMGLREGWTG-TSVVIYDRLFIVSEL 311

[Close]
BLAST of Carg19490 vs. Swiss-Prot
Match: sp|Q9LM55|FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.4e-06
Identity = 78/324 (24.07%), Postives = 118/324 (36.42%), Query Frame = 0 

Query: 29  LLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFS-----------LYALLS 88
           L+P LPD+++   L  LP     SV    RR   + S    +S           LY L  
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 89  SSPDSIDFFNFDPISSKWTSLPPHP------------------NPPSLQLLIHHPSFLSR 148
              D + ++  DP+S+KW  LPP P                    PS  +     SFL R
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 149 HLPVQSL--------AVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRW 208
               + +        AV G L ++   + +    +     F P+ NSW     +   R +
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRS--KTVSCVWRFDPILNSWSEVSSMLASRAY 222

Query: 209 CAAGALRGSVYVASGIG-SFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGR-------F 268
              G L   +YV  G+          +S E +D       AW +V  +   +       F
Sbjct: 223 SKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPST---DAWSEVPSMPFSKAQVLPNAF 282

Query: 269 SRD-----ATDAVGWRGKLCM----------VNVKGDARKEGLVYDLERDEWEEMSEGMI 288
             D     AT    + G+LC+          V+V G+      VYD E + W EM  GM 
Sbjct: 283 LADLLKPIATGMTCYNGRLCVPQSLYSWPFFVDVGGE------VYDPETNLWVEMPSGMG 342

[Close]
BLAST of Carg19490 vs. Swiss-Prot
Match: sp|Q93W93|FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04
Identity = 49/158 (31.01%), Postives = 67/158 (42.41%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPS---LLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPD--- 87
           PLLPGLPDD+A  CL  +P +    L  VC+ W RL  S +F  F+S   LL  S +   
Sbjct: 77  PLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLA-SGNF--FYSQRKLLGMSEEWVY 136

Query: 88  --------SIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLL 147
                    I +  FDPIS  W  LPP P               S  +      +SG  L
Sbjct: 137 VFKRDRDGKISWNTFDPISQLWQPLPPVPRE------------YSEAVGFGCAVLSGCHL 196

Query: 148 LLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRW 172
            L      L  ++ R + ++  +N W  AP +   R +
Sbjct: 197 YLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHF 219

[Close]
BLAST of Carg19490 vs. TrEMBL
Match: tr|A0A1S3BK00|A0A1S3BK00_CUCME (F-box/kelch-repeat protein SKIP25 OS=Cucumis melo OX=3656 GN=LOC103490713 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 1.4e-163
Identity = 290/342 (84.80%), Postives = 302/342 (88.30%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN 87
           PLLPGLPD VAQ CL H+PPSLLFSV RSWRRLLYSPSFPPF SLYALLSSS +S+DFFN
Sbjct: 29  PLLPGLPDHVAQFCLSHVPPSLLFSVSRSWRRLLYSPSFPPFSSLYALLSSSSNSLDFFN 88

Query: 88  FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP 147
           FDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPVQSL+VSGHLLLLAATTHNLLPALP
Sbjct: 89  FDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLSVSGHLLLLAATTHNLLPALP 148

Query: 148 RPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPI 207
           RPLLFSP SNSWR APPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLK  
Sbjct: 149 RPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKAN 208

Query: 208 DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGM 267
             G WEKVSGLKDGRFSRDA DAVGW+GKLCMVNVKG A KEGLVYDLE+DEWE+M EGM
Sbjct: 209 GAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVKGHALKEGLVYDLEKDEWEDMPEGM 268

Query: 268 IGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGRVCV 327
           IGGWRGP A M+EE+MYVVDEV+GSLRRY           ESNRLKGAVQMAAGGGRVCV
Sbjct: 269 IGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFWEDVMESNRLKGAVQMAAGGGRVCV 328

Query: 328 VCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS 370
           VC GSR EIVVVDVVASP RLWVE TPPG EVVAVHVLPRM+
Sbjct: 329 VCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVHVLPRMN 370

[Close]
BLAST of Carg19490 vs. TrEMBL
Match: tr|A0A0A0L136|A0A0A0L136_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G003480 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 9.7e-160
Identity = 283/344 (82.27%), Postives = 298/344 (86.63%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSSPDSIDFFN 87
           PLLPGLPD VAQ CL H+PPSLLFSV RSWRRLLYSPSFPPF SLYALLSSS +S+DFFN
Sbjct: 29  PLLPGLPDHVAQFCLSHVPPSLLFSVSRSWRRLLYSPSFPPFSSLYALLSSSSNSLDFFN 88

Query: 88  FDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPALP 147
           FDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPVQSL VSGHLLLLAATT+NLLPALP
Sbjct: 89  FDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLTVSGHLLLLAATTYNLLPALP 148

Query: 148 RPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPI 207
           RPLLFSP SNSWR APPLPTPRRWCAAGAL GSVYVASGIGSFFSTDVARSVERWD K  
Sbjct: 149 RPLLFSPFSNSWRLAPPLPTPRRWCAAGALHGSVYVASGIGSFFSTDVARSVERWDFKSN 208

Query: 208 DGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERDEWEEMSEGM 267
               WEKVSGLKDG+FSRDA DAVGW+GKLCMVNVKG A KEGLVYDLE+DEWEEM EGM
Sbjct: 209 GADGWEKVSGLKDGKFSRDAIDAVGWKGKLCMVNVKGHALKEGLVYDLEKDEWEEMPEGM 268

Query: 268 IGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQMAAGGGRVCV 327
           I GWRGPVA M+E++MYVVDE++GSLRRY           ESNRLKGAVQMAAGGGRVCV
Sbjct: 269 IEGWRGPVAAMDEKDMYVVDEISGSLRRYDSEKDFWEEVMESNRLKGAVQMAAGGGRVCV 328

Query: 328 VCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMSAS 372
           VC GSR EIVVVDVV SP RLWVE TPPG EVVAVHVLPRM+ +
Sbjct: 329 VCGGSRGEIVVVDVVTSPARLWVEPTPPGTEVVAVHVLPRMNGA 372

[Close]
BLAST of Carg19490 vs. TrEMBL
Match: tr|A0A2C9V0W4|A0A2C9V0W4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G129100 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 3.5e-125
Identity = 227/356 (63.76%), Postives = 271/356 (76.12%), Query Frame = 0 

Query: 29  LLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLSSS-----PDSI 88
           L+PGLPD +A LCL  +PPSLLFSVC SWRRL+YSPSFPPF SLY +LSS+      +SI
Sbjct: 36  LIPGLPDHIALLCLSCVPPSLLFSVCPSWRRLIYSPSFPPFLSLYTVLSSTDHGDLSNSI 95

Query: 89  DFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLL 148
            FFNFDPISSKW SLP       L LL+ HP+F+SR++PVQS++VSG L+LLAATTHN  
Sbjct: 96  QFFNFDPISSKWASLPXXXXXXXLHLLLRHPAFISRYIPVQSVSVSGQLILLAATTHNFF 155

Query: 149 PALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWD 208
           PAL RPL+F+PL+ +W F PPL TPRRWCAAGA+ GS+YVASGIG++FS+DVA+SVE+WD
Sbjct: 156 PALSRPLIFNPLNCTWVFGPPLATPRRWCAAGAINGSIYVASGIGAYFSSDVAKSVEKWD 215

Query: 209 ---------LKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYD 268
                    ++      WEKV GLKDGRFSRDA DA+GWRGKL MVNVKGDA KEGLVYD
Sbjct: 216 FLHDKKTAVVRKGSSWKWEKVKGLKDGRFSRDAIDAIGWRGKLYMVNVKGDAAKEGLVYD 275

Query: 269 LERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKG 328
            E+D WE+M EGM+ GW+GPVA M+EE +YVV+E+ G+L+RY           ES RL G
Sbjct: 276 TEKDAWEDMPEGMLAGWKGPVAAMDEEVIYVVEELKGALKRYDPERDDWEDIMESERLIG 335

Query: 329 AVQMAAGGGRVCVVCSGSRR-EIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS 370
           A Q++AGGGRVCVVC GS    IVV+DVV  P RLW+  TPPG E VAVH+LPRMS
Sbjct: 336 AQQISAGGGRVCVVCGGSNSGGIVVLDVVTDPVRLWIVETPPGFEAVAVHILPRMS 391

[Close]
BLAST of Carg19490 vs. TrEMBL
Match: tr|M5WZH1|M5WZH1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G018500 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 4.6e-125
Identity = 230/351 (65.53%), Postives = 274/351 (78.06%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALL--SSSPDSIDF 87
           PLLPGLPDD+AQ+CL  + PS+LFSVC SWRRL+YS SFPPF SLYALL  SSSP+SI F
Sbjct: 26  PLLPGLPDDIAQVCLSLVHPSVLFSVCTSWRRLIYSSSFPPFLSLYALLTSSSSPNSIQF 85

Query: 88  FNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPA 147
           ++FDP+SS W +LP  P  P L+L + HPSF+SR+LP+QS++VSG+L+L+AATT NLLPA
Sbjct: 86  YSFDPLSSNWHALPATPPDPPLRLFLRHPSFISRNLPIQSVSVSGNLVLVAATTSNLLPA 145

Query: 148 LPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDL- 207
           LPRPL+F P++  W F PPL TPRRWC+AGAL G+VYVASGIGS FS DVARSVE+WDL 
Sbjct: 146 LPRPLVFDPVAKKWAFGPPLATPRRWCSAGALGGAVYVASGIGSHFSIDVARSVEKWDLT 205

Query: 208 ----KPID--GGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDLERD 267
                P D  G  WEK  GL+DGRFSRDA +AVGWRGKLCMVN+KGDA KEGL+YD+E+D
Sbjct: 206 KNKKHPNDHLGWEWEKARGLRDGRFSRDAIEAVGWRGKLCMVNLKGDAVKEGLMYDVEKD 265

Query: 268 EWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGAVQM 327
            W++M EGMIGGW+GPVA M+EE MYVVDE  G+LRRY           ES RL GA Q+
Sbjct: 266 TWQDMPEGMIGGWKGPVAAMDEEVMYVVDEAKGALRRYNPEKDVWVEILESERLIGADQI 325

Query: 328 AAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRMS 370
           A GGGRVCVVC G   +I+VVDV A+PP      TP G+E VA+H+LPRMS
Sbjct: 326 AGGGGRVCVVCRG---KILVVDVTAAPPSFRDVKTPLGLEAVAIHILPRMS 373

[Close]
BLAST of Carg19490 vs. TrEMBL
Match: tr|A0A2P6PB53|A0A2P6PB53_ROSCH (Putative F-box domain, kelch-type beta propeller OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0213971 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 9.5e-123
Identity = 223/353 (63.17%), Postives = 265/353 (75.07%), Query Frame = 0 

Query: 28  PLLPGLPDDVAQLCLCHLPPSLLFSVCRSWRRLLYSPSFPPFFSLYALLS-SSPDSIDFF 87
           PLLPGLPD +AQ CL  + P+ L+SVCRSWRR++Y+ SFPPF SLYAL S SS +SI F+
Sbjct: 29  PLLPGLPDHIAQACLSLVDPTTLYSVCRSWRRVIYTRSFPPFLSLYALFSCSSSNSIQFY 88

Query: 88  NFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPVQSLAVSGHLLLLAATTHNLLPAL 147
           NFDP+SSKW +LP  P  P L+L + HP+F+SR+LP+QS++ SG+L+LLAATTHN  PAL
Sbjct: 89  NFDPVSSKWGALPSTPPDPPLRLFLRHPAFISRNLPIQSVSASGNLVLLAATTHNFFPAL 148

Query: 148 PRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKP 207
           PRPL F P ++SW F PPL TPRRWCAAG LR +VYVASGIGS FS +VARSVE+WDL  
Sbjct: 149 PRPLNFDPSTSSWHFGPPLATPRRWCAAGTLRDAVYVASGIGSHFSVNVARSVEKWDLSK 208

Query: 208 ID-----------GGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVKGDARKEGLVYDL 267
            +           GG WE+VS L+DGRFSRDA DAVGWRGKLCMVNVKGDA K+G+VYD 
Sbjct: 209 KNNSTSPNGSEYLGGEWERVSSLRDGRFSRDAIDAVGWRGKLCMVNVKGDALKDGVVYDA 268

Query: 268 ERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYXXXXXXXXXXTESNRLKGA 327
           E+D W++M EGMI GW GPVA M+E+ MYVVDE  G+LRRY           ES  LKGA
Sbjct: 269 EKDTWQDMPEGMIAGWTGPVAAMDEDVMYVVDEAKGALRRYDPGRDTWHQILESESLKGA 328

Query: 328 VQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVHVLPRM 369
            Q+AAGGGRVC VC G    IVVVDV A  PR+W   TP G+E VA+H+LPRM
Sbjct: 329 DQIAAGGGRVCAVCRG---RIVVVDVAAPRPRVWDVETPSGLEAVAIHILPRM 378

The following BLAST results are available for this feature:
BLAST of Carg19490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923249.11.3e-19299.73F-box/kelch-repeat protein SKIP25-like [Cucurbita moschata][more]
XP_023552710.14.7e-19093.03F-box/kelch-repeat protein SKIP25-like [Cucurbita pepo subsp. pepo][more]
XP_022965312.11.4e-18998.55F-box/kelch-repeat protein SKIP25-like [Cucurbita maxima][more]
XP_008448576.12.2e-16384.80PREDICTED: F-box/kelch-repeat protein SKIP25 [Cucumis melo][more]
XP_022937163.13.0e-16082.81F-box/kelch-repeat protein SKIP25-like isoform X1 [Cucurbita moschata][more]
BLAST of Carg19490 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31350.17.7e-8648.32KAR-UP F-box 1[more]
AT2G24540.11.6e-1427.56Galactose oxidase/kelch repeat superfamily protein[more]
AT1G30090.12.9e-0825.09Galactose oxidase/kelch repeat superfamily protein[more]
AT1G22040.11.9e-0724.07Galactose oxidase/kelch repeat superfamily protein[more]
AT1G55270.17.9e-0631.01Galactose oxidase/kelch repeat superfamily protein[more]
BLAST of Carg19490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GX29|SKI25_ARATH1.4e-8448.32F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1... [more]
sp|Q8LAW2|AFR_ARATH2.8e-1327.56F-box protein AFR OS=Arabidopsis thaliana OX=3702 GN=AFR PE=1 SV=2[more]
sp|Q9C6Z0|FBK17_ARATH5.2e-0725.09F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g3009... [more]
sp|Q9LM55|FBK8_ARATH3.4e-0624.07F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204... [more]
sp|Q93W93|FBK22_ARATH1.4e-0431.01F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527... [more]
BLAST of Carg19490 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BK00|A0A1S3BK00_CUCME1.4e-16384.80F-box/kelch-repeat protein SKIP25 OS=Cucumis melo OX=3656 GN=LOC103490713 PE=4 S... [more]
tr|A0A0A0L136|A0A0A0L136_CUCSA9.7e-16082.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G003480 PE=4 SV=1[more]
tr|A0A2C9V0W4|A0A2C9V0W4_MANES3.5e-12563.76Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G129100 PE=4 SV=... [more]
tr|M5WZH1|M5WZH1_PRUPE4.6e-12565.53Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G018500 PE=4 SV=1[more]
tr|A0A2P6PB53|A0A2P6PB53_ROSCH9.5e-12363.17Putative F-box domain, kelch-type beta propeller OS=Rosa chinensis OX=74649 GN=R... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR015915Kelch-typ_b-propeller
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19490-RACarg19490-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13964Kelch_6coord: 120..169
e-value: 9.2E-6
score: 25.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR24414:SF42SUBFAMILY NOT NAMEDcoord: 21..371
NoneNo IPR availablePANTHERPTHR24414FAMILY NOT NAMEDcoord: 21..371
IPR015915Kelch-type beta propellerGENE3DG3DSA:2.120.10.80coord: 88..345
e-value: 6.7E-20
score: 73.2
IPR015915Kelch-type beta propellerSUPERFAMILYSSF117281Kelch motifcoord: 80..331
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 20..66