Carg19367 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19367
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	COBRA-like protein
Location	Cucurbita_argyrosperma_scaffold_096 : 140949 .. 147214 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTCCGACCACGACACTTGGCCTCTCCAAAGGTTAGACCGACCAATCGATGTTTCCTAGAATATCTTGTTTGAATATAAGCTTTTGGATAAGATGGGATGGAGTTTTAACCCATGTCGGGTTAGGGTAAGGCTTCTTCTTCTTTAGACAAACAAAATGTCAACTGGGTCAGGGTTTGATTTGGGTTCAGACAAACAACAAAATGGAAGCAAGCCCTTCTCCTTCAGTTCTTTGTTTGTTCTTGGTAGCTATGTGCTGTTATTTGGCAGGCATCTTTCTAGCTTTCTTTGGATTCAATTTTTGTGGGATAATATGCCTTTCTTTTTGGTGTCTATTCATAACCTATGTCTTGATCCATGTGTTTGTGGTGCAGGTTGTTTCGATCCCTTGGATCCTAATGGAAATGTTACGATTACTTACGATATTCGAACTTGGACGACTCGTGGATACGCGGTGAGTTTAATGTTTGTGCTTAGCCTAGATGTGAAAGTCGTCCTTGCAAAGAGTATAGAGTCTGTTGATTTAGTAAGTTCGAACGGTTAGGAACTACGACTCTCTATAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCATGACTTTGCTTTTGGTTTCCTCGAAAGGGCTCGTACCGATGGAGATAGTACTCCTTACTTAGCTGGTGTGGGACTCATCTCCCAACAATCCTCCCATCGAACAAAGTATACCATAGAGCCTCCCCTGAGGCCTATGGAGCCCTCAAATAACCTCCTCTTAATCGAGACTTGACTATTTCTCTAGAGCCCTCGAATAAAATACACCATTTGTTCGACATTTGAGTCACTTTTGTCTACACCTTTAAGGCTCACAACTTATTTGGTCGACATTTGAGGATTTTATGAACATGGCTAAGTTAAATACATGACTTTGGTACTATGTTAGAAATCACAGACCTCCACAATGGTATGATTGACTGTTCGTGTGCTTTTAGCTCTTTCGGGTAGGTGACTTCCCGCTGGAAGTCACTAGCAACCATGTCAACTATCTAAGAGTCAAGCCACTATTGCTTTTCATCTCAGATGCCTTCAATACTCAAAACAAACAATTCAATTGGATTCACTCCCACTAATGGGACAAGTTTTCATGTCTATGATGTCTTCTTTGTTCTGTCATAGCGTAACAGTCCAAGTCCAAGTCCACCGTTAGTAGATATTATTTGTTTTGGTCAGTTACGTATCGTCGTCAGTCTCATGGTTTTTAAAATGCATCTGTTAGGGAGAGGTTTCCACACCCTTATAAGGAATCTTTCGTTCCCCTCTCCAACAGATGTGGGATCTCACAATCCACTCCCCCTTGGGGGTTCAGCGTCCTCGCTGGCACACCGCCTGGTGACTGACTCTGATACCATTTGTAACAGCCCAAGCCCACCCCTAGTAGATATTGTCTACTTTGACCCGTTACGTATCGCCGTCAACCTCACGGTTTTTAAAATGCGTCTGCTAGGGATAGGTTTCCATACCCTTATAAGGAATGCTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCTCCTTGGGGGCCCAATGTCCTCGCTGGCACACCGCCTGGTAGCTGGCTCTGATACCATATGTAACAGCCCAAGTCCACCTCTAGTAGATATCGTCCCCTTTGGCCCTTTACATATCGCCGTTAGCCTCACGGTTTTTAAAACACGTCTACCCCGCTCCAATCGATGTGGGATCTCACATCCGGTGTTGTTGGAACTACTAAACCAAACAGAGTTATAAGTTCAACTTAAAGTTCATTCAAGTTAGTTTGTGCAATTTTCACTGGTTTTCATCATTTGGGTTTATCTGGAAGATAGGAAAGCTATGAACTTTCTCACCAACATGTCCTTCTCAGGGGAGGGTCACGGTCCAAAACTACTATCAGTTCCGACACGTGGAGAAGCCGGGTTGGAAGCTGGGGTGGACATGGACAAGGGATGAAGTCATCTGGTCAATGAGTGGAGCTTTTGCAACTGAACAAGGGAATTGCTCGTTGTTTAAGTTTGACACTCCACATTCCTGTGAAGAGAGCCCTGTCATTCTTGATCTCATGCCGGAGGCATCGCCCGAAAACCGATCGGAGGGTTGCTGTCGCGGTGGGGTTCTTTCTGCTCGGGCTGTGGACCCTTCCAAGTCATTCACTTCGTTTGAAATTTCAGTTGGGAGTATGGATGAAGATGGCCATGAGCAACCACCGGCCAATGTTACTCTCATGGCGCCTGGTCTTGGTTACACTTGCAGCCCATTTTTGGACGCTCATCCAACCGTTTCTTCTGTCATTGACGGCAAAAGACAAGTTCAGGTTTTTAGTAAGTACTTTAAATGAATATACATGGTTGGGTTTTTCTTTTCGGGCTTCGCAAGGCTTTAAAACGCGTTTGCTAGAGGAAGGTTTCCACACCGTTATAAATGGTGGTTTGTTCTCCTTCCCAACTAATGTGGGACATCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGAGCGTTACAAATGGTATCAGAGCCAAACACCAGATGACGTGCTAGCCTTCATGCTGTTCCCCGAAGGGGGTAGACACGAGGTGGTGTGCCAGTAAGGACGCTGGCCCCAAAGGGGGTGGATTTGGGGGTGGTCCTATATCGATTGGAGGAAGGAAAGAGTGCCAGCGAAGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAAAACAAACCACCATTTATAAGGGTGTGGCAACCTTCCCCTAGCAAACGCGTTTTAAAGCCTTGAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGGTGGATCTAGGTCATTACACTTTTGGCTCTGGAAATTGCTCTCAAGTGCCCAAAAGAATGGCACAGCCTGCTGATTACATTTTTTAATCCAACTCTTATATGCTACGCGATCGCTTTCATGATATCAACTTCATAGTTTTTTGGAGTCTATTCTTGTAACGGTCCTAGCTCACCACTGGCCGATATTGTCCACTTTGGGCTTTCCTTTCAGGGTTTTGAAACAGTCTGCTAGGGAGAGGTTTCCACACCCTTACAAAAGGAAAAGTTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGACTGTTACAAATAGTATCAGAGCTAGACACTGGGCGGTGTGCCAGTAAGGACGTTGACCCCCCAAGAGGAGTTGGATTGTGGGAGGTCCCACATCGATTGAAGAAAGGAACTAGTGCCAGCGAGGACATTGGGCCCTGAAGAAGGGTGAATTGTAAGATACCACATTGGTTGGGGAGGAGAACGAAACATTCCTTTTAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCACAAAGAAGAGAATATCTGCTAGATGTGGGCTTGGACTCGGGCTTATTAGAAGCACAAGTCGACAACCCATAGAATGTCTTACTAGATTTCATGTTTCTCTTTAGGCTTTGTGTATGAAGCTGTTTTGTCAATAAAAGGAAAAATCCATCTCTTTTTCTTGGTGAAAACTTCGACCAAAACCTTAAATCTGAAGCTTGACTACTGGTTTTTGCAGGAACATGGAAGTCAACATGTACTTACTCCATGTTTGTGGCGAACAAGACACCACTCTGTCGTGTCTCACTCTCAACATTTTACAATCCCTCCATCACACCCTGCCCTACATGCAGCTGTGGTTGCAGAAAAGCAAACAAAAGCTCTGTTCACTGTACAAGGTATTTGCCAGCTCGTTTTTAGCTGCCATGCTTTATCAATAGCATACTTTCTGTTACCATATGATCAACCCCTCGGGTGAGATCTCATATTAGTTGGAGAGGGAAACGAAACATACTTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGTGTTTTAAAATTTTGAGGGAAAGCTCAAAGAGCTAGGCACCGAACGATAGTAGAGCTAGGCACCGAACGATAGTAGAGCTAGGCACCGAACGATGTGTTAGCGAGGACGCTGGGCACCAAGGGGGTGGATTGTGGGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTTCTTATAAGGGTGTAGAAACCTCTCTCTAGTAGACGCGTTTTAAAACTTTGAGGGAAAGCCTAAAGAGGACAATATCTGCTAACGGTGGACTTGGCCAATTACAAATAGTATCAGAGCTAGGCACTGAACTGTGTGTCTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTAGACGGGTTTTAAAACTTTGAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGACTTGGCCTGTTACAAATAGTATCAGAGCTAGGCACTGAACGGTGTGTCAGCGAGGATGCTAGGCCCTAAAGAAGTGGATTGTGAGATCTCACATTGGTTGTAGAGGGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAATAGGCACGTTTTAAGACCTTGAGGGAATACTCAAAGAAGACAATATTTGCTAGCGGTCCAATGTTTTAAGAGAATACTTGGGAATATGTGGTCACAACGAGTGCACGGGCGAACTCTGGCAACATTGTATATCGGTACTATATTACGGTTCTTCGAGTGTTGTTGTGTAGATACCCACGCAAACCGCCCTATTCGTATTCTCTTCTCTTTTCGACTCTTACATTTTCTTGTAACAAGCTATCATGTTTCTCTTGACACCAGACAAGAACACCCGTTGTCGACCACGGATTCTTCTAACGATCTCGCCGCAGTACAGTGCTCGGACCACATGTGCCCGGTTCGGGTGCATTGGCACGTTATGACGAACTATATCAACCATTGGAGGGTGAAACTCACAGTTTCCAACTACAACTACAACAGAAACTACTCAAACTGGAACATCCTAGTACAGCATCCAGGCTTCAAACAATCAACAAAAGCATTTAGTTTCAATAGCTCACAACTTCCATCCTTCAGATTTGGAGGTACATTACATATTTCTTCTTCTGCAACGTCGACATTATCAAACCGGTTGAAGCAACGTTTTGACACGAATTTTGTAACAACCCAGATCCACTACTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTTCAGGCTTCCCCTCAAGACTTTAAAACGCGTCTGCTTGGGGAAGGTTTCCATACCCTTATAAAGGTTGTTTCGTTCTCCTCTCCAACCAACGTGGGACTCTCACAATCCACCTCCTTTAAGGCTCAGCTTCCTTGCTTACACTCTTTCCTTTCTCCAATCGATGTGGGACCCTCCGACAAATCCACTCACTTTGGGGCCTAGCGTCCTTATTGGCACATCGTCTCGTGTCTACCCCCTTCGGGGACCAGTGAGAAGGCTCGTACATCGTCCAGTGTCTGACTCCAATACCATTTGTAACAACCCAAATCCACCACTATCAGATATTGTCCTCTTTGGACTTTCCCTTTAGGGCTTCCCCTCAATGCTTTAAAATGCGTCTGTGCTAGGGGAAGGTTTCCACACCCTTATAAAGGTTGTTTCGTTCTCCTCCTCAACCAATGTGAGACTCTCACAATCCATCCTCTTTAGAACCCAACGTCCTCGTTGACACTCTTTCCTTTCTCTAATCAATGTTGGACCCTCCGCCAAATCCACCCCCCTTTGGGGTCCAGCGTCCTTACTAGCACACCGTCTCGTGTCTACCCCCTTCGGGGACCAGTGAGAAGGCTGGCACATCATCCAGTGTCTGACTCTGATATCATTTGTAACAACCCAAATCCACCGCTCGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACACGTCTACTGAGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTTCCCAACCAACGTGAGACTCTCACAGATTTGTCGTGTGTTTGCAGGCGAGTTGGGTGTCTTTTGGGGCATTGAGTATTACAACACAGAGCTTGTGCAATCCACTGATATCAATGTGGGGCATGTGACAACAGAGATTGTTCTTGAAAAAGACTTAGAATCATTCACATTAAGCAATGGTTGGGCGCTTCCAAGAAGAGTTTATTTCAATGGAGATTACTGTCAGATGCCTTTACCTGACACCTTCCCAATGCTACCAAATGGGAGTTCTAAACAAACCCTCTCCATTCTCCTCTTGTTGGCCTTTTTGTTTTGGTGA

mRNA sequence

ATGGAACTCCGACCACGACACTTGGCCTCTCCAAAGGTTGTTTCGATCCCTTGGATCCTAATGGAAATGTTACGATTACTTACGATATTCGAACTTGGACGACTCGGGAGGGTCACGGTCCAAAACTACTATCAGTTCCGACACGTGGAGAAGCCGGGTTGGAAGCTGGGGTGGACATGGACAAGGGATGAAGTCATCTGGTCAATGAGTGGAGCTTTTGCAACTGAACAAGGGAATTGCTCGTTGTTTAAGTTTGACACTCCACATTCCTGTGAAGAGAGCCCTGTCATTCTTGATCTCATGCCGGAGGCATCGCCCGAAAACCGATCGGAGGGTTGCTGTCGCGGTGGGGTTCTTTCTGCTCGGGCTGTGGACCCTTCCAAGTCATTCACTTCGTTTGAAATTTCAGTTGGGAGTATGGATGAAGATGGCCATGAGCAACCACCGGCCAATGAACATGGAAGTCAACATGTACTTACTCCATGTTTGTGGCGAACAAGACACCACTCTGTCGTGTCTCACTCTCAACATTTTACAATCCCTCCATCACACCCTGCCCTACATGCAGCTGTGGTTGCAGAAAAGCAAACAAAAGCTCTCTATCATGTTTCTCTTGACACCAGACAAGAACACCCGTTGTCGACCACGGATTCTTCTAACGATCTCGCCGCAGTACAGTGCTCGGACCACATGTGCCCGGTTCGGGTGCATTGGCACGTTATGACGAACTATATCAACCATTGGAGGGTGAAACTCACAGTTTCCAACTACAACTACAACAGAAACTACTCAAACTGGAACATCCTAATGCCTTTACCTGACACCTTCCCAATGCTACCAAATGGGAGTTCTAAACAAACCCTCTCCATTCTCCTCTTGTTGGCCTTTTTGTTTTGGTGA

Coding sequence (CDS)

ATGGAACTCCGACCACGACACTTGGCCTCTCCAAAGGTTGTTTCGATCCCTTGGATCCTAATGGAAATGTTACGATTACTTACGATATTCGAACTTGGACGACTCGGGAGGGTCACGGTCCAAAACTACTATCAGTTCCGACACGTGGAGAAGCCGGGTTGGAAGCTGGGGTGGACATGGACAAGGGATGAAGTCATCTGGTCAATGAGTGGAGCTTTTGCAACTGAACAAGGGAATTGCTCGTTGTTTAAGTTTGACACTCCACATTCCTGTGAAGAGAGCCCTGTCATTCTTGATCTCATGCCGGAGGCATCGCCCGAAAACCGATCGGAGGGTTGCTGTCGCGGTGGGGTTCTTTCTGCTCGGGCTGTGGACCCTTCCAAGTCATTCACTTCGTTTGAAATTTCAGTTGGGAGTATGGATGAAGATGGCCATGAGCAACCACCGGCCAATGAACATGGAAGTCAACATGTACTTACTCCATGTTTGTGGCGAACAAGACACCACTCTGTCGTGTCTCACTCTCAACATTTTACAATCCCTCCATCACACCCTGCCCTACATGCAGCTGTGGTTGCAGAAAAGCAAACAAAAGCTCTCTATCATGTTTCTCTTGACACCAGACAAGAACACCCGTTGTCGACCACGGATTCTTCTAACGATCTCGCCGCAGTACAGTGCTCGGACCACATGTGCCCGGTTCGGGTGCATTGGCACGTTATGACGAACTATATCAACCATTGGAGGGTGAAACTCACAGTTTCCAACTACAACTACAACAGAAACTACTCAAACTGGAACATCCTAATGCCTTTACCTGACACCTTCCCAATGCTACCAAATGGGAGTTCTAAACAAACCCTCTCCATTCTCCTCTTGTTGGCCTTTTTGTTTTGGTGA

Protein sequence

MELRPRHLASPKVVSIPWILMEMLRLLTIFELGRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCEESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPANEHGSQHVLTPCLWRTRHHSVVSHSQHFTIPPSHPALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPDTFPMLPNGSSKQTLSILLLLAFLFW

Homology

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BLAST of Carg19367 vs. NCBI nr
Match: XP_022953022.1 (COBRA-like protein 1, partial [Cucurbita moschata])

HSP 1 Score: 380.6 bits (976), Expect = 5.0e-102
Identity = 218/389 (56.04%), Postives = 231/389 (59.38%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +GRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE
Sbjct: 52  GYVGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 111

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
           ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN 
Sbjct: 112 ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPANV 171

Query: 153 ---EHGSQHVLTPCL---------------------WRT--RHHSVVSHS--------QH 212
                G  +  +P L                     W++   +   V++           
Sbjct: 172 TLMAPGLGYTCSPFLDAHPTVSSVIDGKRQVQVFRTWKSTCTYSMFVANKTPLCCVSLST 231

Query: 213 FTIPPSHPALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVH 272
           F  P   P    +    K  K+  H    TR+EHPLSTT+SSNDLAAVQCSDHMCPVRVH
Sbjct: 232 FYNPSITPCPTCSCGCRKANKSSVHC---TREEHPLSTTNSSNDLAAVQCSDHMCPVRVH 291

Query: 273 WHVMTNYINHWRVKLTVSNYNYNRNYSNWNIL---------------------------- 300
           WHVMTNYI+HWRVKLTVSNYNYNRNYSNWNIL                            
Sbjct: 292 WHVMTNYIDHWRVKLTVSNYNYNRNYSNWNILVQHPGFKQSTEAFSFNSSQLPSFRFGGE 351

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BLAST of Carg19367 vs. NCBI nr
Match: KGN43224.1 (hypothetical protein Csa_7G009200 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 178/308 (57.79%), Postives = 200/308 (64.94%), Query Frame = 0


Query: 1   MELRPRHLASPKVVSIPWILMEMLRLLTIFELGRLGRVTVQNYYQFRHVEKPGWKLGWTW 60
           ME R RHL SPK                       GRVTVQNYYQFRHVE PGWKLGWTW
Sbjct: 1   MEFRSRHLTSPK-----------------------GRVTVQNYYQFRHVENPGWKLGWTW 60

Query: 61  TRDEVIWSMSGAFATEQGNCSLFKFDTPHSCEESPVILDLMPEASPENRSEGCCRGGVLS 120
           TR EVIWSM+GAFATEQGNCSLFKFD PHSCE+SPVILDLMPEASPENRSEGCCR GVLS
Sbjct: 61  TRGEVIWSMNGAFATEQGNCSLFKFDIPHSCEDSPVILDLMPEASPENRSEGCCRSGVLS 120

Query: 121 ARAVDPSKSFTSFEISVGSMDEDGHEQPPAN----EHGSQHVLTPCL------------- 180
           A AVDPSKSF+SFEISVGS DEDG+EQPP N      G  +  +P L             
Sbjct: 121 AWAVDPSKSFSSFEISVGSTDEDGNEQPPVNITLMAPGPGYTCSPFLDSSPTISSVIDGK 180

Query: 181 --------WR-TRHHSVVSHSQ---------HFTIPPSHPALHAAVVAEKQTKALYHVSL 240
                   W+ T  +S+   ++          F  P   P    +    K +K+      
Sbjct: 181 REVQVFRTWKSTCTYSIFVDNKTPVCCVSLSAFYNPSITPCPSCSCGCRKASKSSVQC-- 240

Query: 241 DTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHVMTNYINHWRVKLTVSNYNYNRNYSN 274
            TR E+ LS+TDS+ +L++V+CSDHMCPVRVHWHV TNYINHWRVKLTVSNYNYNRNYSN
Sbjct: 241 -TRDEYQLSSTDSATNLSSVRCSDHMCPVRVHWHVKTNYINHWRVKLTVSNYNYNRNYSN 282

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BLAST of Carg19367 vs. NCBI nr
Match: XP_011659689.1 (PREDICTED: COBRA-like protein 2 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 1.5e-85
Identity = 170/276 (61.59%), Postives = 193/276 (69.93%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +GRVTVQNYYQFRHVE PGWKLGWTWTR EVIWSM+GAFATEQGNCSLFKFD PHSCE
Sbjct: 44  GYVGRVTVQNYYQFRHVENPGWKLGWTWTRGEVIWSMNGAFATEQGNCSLFKFDIPHSCE 103

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
           +SPVILDLMPEASPENRSEGCCR GVLSA AVDPSKSF+SFEISVGS DEDG+EQPP N 
Sbjct: 104 DSPVILDLMPEASPENRSEGCCRSGVLSAWAVDPSKSFSSFEISVGSTDEDGNEQPPVNI 163

Query: 153 ---EHGSQHVLTPCL---------------------WR-TRHHSVVSHSQ---------H 212
                G  +  +P L                     W+ T  +S+   ++          
Sbjct: 164 TLMAPGPGYTCSPFLDSSPTISSVIDGKREVQVFRTWKSTCTYSIFVDNKTPVCCVSLSA 223

Query: 213 FTIPPSHPALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVH 272
           F  P   P    +    K +K+       TR E+ LS+TDS+ +L++V+CSDHMCPVRVH
Sbjct: 224 FYNPSITPCPSCSCGCRKASKSSVQC---TRDEYQLSSTDSATNLSSVRCSDHMCPVRVH 283

Query: 273 WHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLP 274
           WHV TNYINHWRVKLTVSNYNYNRNYSNWNIL+  P
Sbjct: 284 WHVKTNYINHWRVKLTVSNYNYNRNYSNWNILVQHP 316

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BLAST of Carg19367 vs. NCBI nr
Match: XP_016900461.1 (PREDICTED: COBRA-like protein 2, partial [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 6.4e-81
Identity = 182/388 (46.91%), Postives = 210/388 (54.12%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +GRVT+QNYYQFRHVE PGWKL WTWTR EVIWSM+GAFATEQGNCSLFKFD PHSCE
Sbjct: 37  GYVGRVTIQNYYQFRHVENPGWKLAWTWTRGEVIWSMNGAFATEQGNCSLFKFDIPHSCE 96

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
           E PVILDLMPEAS  NRSEGCCR GVLSA AVD SKSF+SFEISVGS DEDG+E PPAN 
Sbjct: 97  ERPVILDLMPEASLGNRSEGCCRSGVLSAWAVDRSKSFSSFEISVGSKDEDGNELPPANI 156

Query: 153 ---EHGSQHVLTPCL---------------------WR-TRHHSVVSHSQ---------H 212
                G  +  +P L                     W+ T  +S+   ++          
Sbjct: 157 TLMAPGPGYTCSPFLDSHPTVSSVIDGKREVQVFRTWKSTCTYSIFVDNKTPVCCVSLSA 216

Query: 213 FTIPPSHPALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVH 272
           F  P   P    +    K  K+       TR E+ LS++DS+ +L++V+CSDHMCPVRVH
Sbjct: 217 FYNPSITPCPSCSCGCRKANKSSVQC---TRDEYQLSSSDSATNLSSVRCSDHMCPVRVH 276

Query: 273 WHVMTNYINHWRVKLTVSNYNYNRNYSNWNIL---------------------------- 300
           WHV TNYINHWRVKLTVSNYNYNRNYSNWNIL                            
Sbjct: 277 WHVETNYINHWRVKLTVSNYNYNRNYSNWNILVQHPGFGQSTEAFSFNSSQLPSLRYGDE 336

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BLAST of Carg19367 vs. NCBI nr
Match: XP_022135670.1 (COBRA-like protein 2 [Momordica charantia])

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 178/389 (45.76%), Postives = 205/389 (52.70%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G + RVTVQNYYQFRHVEKPGWKLGWTW R EVIWSMSGAFATEQGNCSLFK+DTPHSC 
Sbjct: 47  GYVARVTVQNYYQFRHVEKPGWKLGWTWVRGEVIWSMSGAFATEQGNCSLFKYDTPHSCV 106

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
           ESP+IL+LM +ASP NRS+GCC GGVLS+ AVDPSKSF+SFEI+VGS DEDG+EQ PAN 
Sbjct: 107 ESPMILELMSKASPANRSDGCCNGGVLSSWAVDPSKSFSSFEITVGSSDEDGNEQHPANI 166

Query: 153 ---EHGSQHVLTPCL-WRTRHHSVVSHSQHFTIPPSHPALHAAVVAEKQTKALYHVSLDT 212
                G  +  +P L       SV+   +   +  +  +     +       L  VSL T
Sbjct: 167 TLMAPGPGYTCSPFLDANPTVSSVIDGKRQVQVFRTWKSTCTYSMFVDNKTPLCCVSLST 226

Query: 213 ---------------------------RQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHV 272
                                      R+E+ L T DS+++ A VQCSDHMCPVRVHWH+
Sbjct: 227 FYSSTITPCPACSCGCRKSDKSSVQCIREEYQLPTADSADNRALVQCSDHMCPVRVHWHL 286

Query: 273 MTNYINHWRVKLTVSNYNYNRNYSNWNIL------------------------------- 300
             NY+NHWRVKLTVSNYNY+RNYSNWNIL                               
Sbjct: 287 KANYVNHWRVKLTVSNYNYDRNYSNWNILVQHPGFNQPTEAFSFNSSQLPSFRFGDELGL 346

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BLAST of Carg19367 vs. TAIR10
Match: AT3G29810.1 (COBRA-like protein 2 precursor)

HSP 1 Score: 176.4 bits (446), Expect = 2.6e-44
Identity = 97/276 (35.14%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VT+ N+ Q+RH+E PGW+LGW+W + EVIWSM G  ATEQG+CS FK + PH C+
Sbjct: 51  GYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGNIPHCCK 110

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDG-------- 152
           ++P I+DL+P      +   CCRGGV+SA A DP+ + +SF+ISVG              
Sbjct: 111 KTPAIVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRN 170

Query: 153 ---HEQPPANEHGSQHVLTPCLW-----RTRHHSVV------SHSQHF-----TIPPSHP 212
                  P    G   ++ P  +     R +  S++      ++SQ       T   S  
Sbjct: 171 ITLKAPGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLS 230

Query: 213 ALHAAVVAE-------KQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHW 272
           A +   +          Q  +     +D +    +     +N    +QC+ HMCP+RVHW
Sbjct: 231 AFYNETIVPCPTCSCGCQNSSQAGTCVDPKIASVVPALGKNNLEPLLQCTQHMCPIRVHW 290

Query: 273 HVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           HV T+Y  +WRVK+ ++N+NYN NYS WN+++  P+
Sbjct: 291 HVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPN 326

[Close]

BLAST of Carg19367 vs. TAIR10
Match: AT3G02210.1 (COBRA-like protein 1 precursor)

HSP 1 Score: 166.4 bits (420), Expect = 2.7e-41
Identity = 93/280 (33.21%), Postives = 145/280 (51.79%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VTV N+ Q+RH++ PGW LGW+W + EVIW M+G   TEQG+CS FK   PH C+
Sbjct: 56  GYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCK 115

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHE-QPPAN 152
           ++P ++DL+P +    +   CCRGGVL++ A DP+ + ++F+++VG         + P N
Sbjct: 116 KTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKN 175

Query: 153 ----EHGSQHVLTPCLWRTRHHSVVSHSQHFT---IPPSHPALHAAVVAEK------QTK 212
                 G  +  +P         + +  +  T   +  +    ++  +A+K         
Sbjct: 176 FTLKAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLS 235

Query: 213 ALYH---VSLDT------RQEHPLSTTDSSNDLAA---------------VQCSDHMCPV 272
           + Y+   VS  T          P +  D      A               VQC+ HMCPV
Sbjct: 236 SFYNKTIVSCPTCSCGCRNTSQPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPV 295

Query: 273 RVHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           R+HWHV  NY  +WRVK+T++N+NYN NYS WN+++  P+
Sbjct: 296 RIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPN 335

[Close]

BLAST of Carg19367 vs. TAIR10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family)

HSP 1 Score: 164.9 bits (416), Expect = 7.9e-41
Identity = 98/302 (32.45%), Postives = 139/302 (46.03%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VT+ N+  +RH++ PGW LGWTW + EVIWSM GA  TEQG+CS FK + PH C+
Sbjct: 43  GYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCK 102

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDE---------- 152
           ++P ++DL+P      +   CC+GGV+ A   DPS + + F++S G              
Sbjct: 103 KTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKN 162

Query: 153 -------DGHEQPPANEHGSQHVLTP---------CLWRT----------RHHSVVSHSQ 212
                   G+   PA    S   LT            W            +H S      
Sbjct: 163 FTLLGPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFS 222

Query: 213 HFTIPPSHPALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRV 272
            F      P    A   E + K+          +  L+T    N    +QC+ HMCPVRV
Sbjct: 223 SFYNDTITPCPSCACGCENK-KSCVKADSKILTKKGLNTPKKDN-TPLLQCTHHMCPVRV 282

Query: 273 HWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLP-----------DTFPMLPNGSSK 288
           HWHV TNY ++WRVK+ ++N+NY  N++ W + +  P           D  P+ P GS  
Sbjct: 283 HWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSIN 342

[Close]

BLAST of Carg19367 vs. TAIR10
Match: AT1G09790.1 (COBRA-like protein 6 precursor)

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-40
Identity = 95/276 (34.42%), Postives = 139/276 (50.36%), Query Frame = 0


Query: 37  RVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLF--KFDTPHSCEES 96
           +VT++N  ++RHVEKPGWKL W W   EVIW M GA  TEQGNCS F    + PH C E 
Sbjct: 62  QVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLER 121

Query: 97  PVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQ--PPAN- 156
           P I+DL+P AS   +   CCRGGVL++ + D +   ++F ++VGS   DG E+   P+N 
Sbjct: 122 PTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGS-SPDGPEEFNMPSNF 181

Query: 157 ----------------------EHGSQHVLTPCLWRTRHHSVVSHSQHFTIPPSHPALHA 216
                                 + G +       W     +V  +SQ  + P     +  
Sbjct: 182 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATW----EAVCVYSQFRSSPSPKCCVSL 241

Query: 217 AVVAEKQTKALYHVSLDTRQEHPL----------STTDSSNDLA-AVQCSDHMCPVRVHW 275
           +    +        S      H +             D   +++  V+CSDHMCP+R+HW
Sbjct: 242 SAFYYQNIVPCPTCSCGCSSSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHW 301

[Close]

BLAST of Carg19367 vs. TAIR10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family)

HSP 1 Score: 161.4 bits (407), Expect = 8.7e-40
Identity = 88/282 (31.21%), Postives = 138/282 (48.94%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VT+ N+ ++RH++ PGW LGW W + EVIWSM GA  TEQG+CS +K + PH C+
Sbjct: 59  GYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCK 118

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHE------ 152
           + P ++DL+P      +   CC+GGV+++   DP+ + +SF+ISVG+             
Sbjct: 119 KDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRN 178

Query: 153 -----QPPANEHGSQHVLTPCLW---RTRHHSVVSHSQHFTIPPSHPALHAAVVAEKQTK 212
                  P    G   ++ P  +    TR  +    + + T   S               
Sbjct: 179 FTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLS 238

Query: 213 ALYHVSL-----------DTRQEHPLSTTDSSNDLAA---------------VQCSDHMC 272
           + Y+ ++           + R E        +  LA+               VQC+ HMC
Sbjct: 239 SFYNETIVGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMC 298

Query: 273 PVRVHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           P+RVHWHV  NY  +WRVK+T++N+NY  NY+ WN++   P+
Sbjct: 299 PIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPN 340

[Close]

BLAST of Carg19367 vs. Swiss-Prot
Match: sp|Q8L8Q7|COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 4.7e-43
Identity = 97/276 (35.14%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VT+ N+ Q+RH+E PGW+LGW+W + EVIWSM G  ATEQG+CS FK + PH C+
Sbjct: 51  GYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGNIPHCCK 110

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDG-------- 152
           ++P I+DL+P      +   CCRGGV+SA A DP+ + +SF+ISVG              
Sbjct: 111 KTPAIVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRN 170

Query: 153 ---HEQPPANEHGSQHVLTPCLW-----RTRHHSVV------SHSQHF-----TIPPSHP 212
                  P    G   ++ P  +     R +  S++      ++SQ       T   S  
Sbjct: 171 ITLKAPGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLS 230

Query: 213 ALHAAVVAE-------KQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHW 272
           A +   +          Q  +     +D +    +     +N    +QC+ HMCP+RVHW
Sbjct: 231 AFYNETIVPCPTCSCGCQNSSQAGTCVDPKIASVVPALGKNNLEPLLQCTQHMCPIRVHW 290

Query: 273 HVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           HV T+Y  +WRVK+ ++N+NYN NYS WN+++  P+
Sbjct: 291 HVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPN 326

[Close]

BLAST of Carg19367 vs. Swiss-Prot
Match: sp|Q6Z4G8|COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.0e-43
Identity = 97/280 (34.64%), Postives = 145/280 (51.79%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  V++ NY Q+RH++ PGWKLGW W + E+IW+M+G  ATEQG+CS FK + PH C+
Sbjct: 51  GYVAVVSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCK 110

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDG-------- 152
           + P I+DL+P      +   CC+GGVL++ A DP+ +  SF++SVG              
Sbjct: 111 KDPEIVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRN 170

Query: 153 ---HEQPPANEHGSQHVLTPCLWRTRHHSVVSHSQHFTIPPSHPALHAAVVAEKQTKALY 212
                  P    GS  V+ P  + ++     + + H T   +    ++ +VA++      
Sbjct: 171 FTLKSPGPGYTCGSAKVVRPTKFFSQDGRRTTQA-HMTW--NVTCTYSQIVAQRSPTCCV 230

Query: 213 HVSL---DTRQEHPLSTTDSSND------------LAA-------------VQCSDHMCP 272
            +S    DT    P  +    N+            LA+             VQC+ HMCP
Sbjct: 231 SLSSFYNDTIVNCPTCSCGCQNNKPGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCP 290

Query: 273 VRVHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLP 274
           +RVHWHV  NY  +WRVK+TV+N+NY  NYS WN++   P
Sbjct: 291 IRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHP 327

[Close]

BLAST of Carg19367 vs. Swiss-Prot
Match: sp|Q9SRT7|COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=COBL1 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.9e-40
Identity = 93/280 (33.21%), Postives = 145/280 (51.79%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VTV N+ Q+RH++ PGW LGW+W + EVIW M+G   TEQG+CS FK   PH C+
Sbjct: 56  GYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCK 115

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHE-QPPAN 152
           ++P ++DL+P +    +   CCRGGVL++ A DP+ + ++F+++VG         + P N
Sbjct: 116 KTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKN 175

Query: 153 ----EHGSQHVLTPCLWRTRHHSVVSHSQHFT---IPPSHPALHAAVVAEK------QTK 212
                 G  +  +P         + +  +  T   +  +    ++  +A+K         
Sbjct: 176 FTLKAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLS 235

Query: 213 ALYH---VSLDT------RQEHPLSTTDSSNDLAA---------------VQCSDHMCPV 272
           + Y+   VS  T          P +  D      A               VQC+ HMCPV
Sbjct: 236 SFYNKTIVSCPTCSCGCRNTSQPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPV 295

Query: 273 RVHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           R+HWHV  NY  +WRVK+T++N+NYN NYS WN+++  P+
Sbjct: 296 RIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPN 335

[Close]

BLAST of Carg19367 vs. Swiss-Prot
Match: sp|Q60E70|COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.4e-40
Identity = 94/283 (33.22%), Postives = 137/283 (48.41%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VT+ NY QFRH++ PGW+LGWTW + EVIWSM GA  TEQG+CS FK  TPH C+
Sbjct: 59  GYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGTPHCCK 118

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPANE 152
           + P ++DL+P      +   CC+ GV++    DPS + +SF+ISVG     G        
Sbjct: 119 KDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLA---GTTNKTVKL 178

Query: 153 HGSQHVLTPCLWRTRHHSVVSHSQHFTIPPSHPALHAAV-----------VAEKQTKALY 212
             +  +  P    T   +++     F       A  A +           +A+K      
Sbjct: 179 PKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCV 238

Query: 213 HVSL---DTRQEHPLSTTDSSNDLAA---------------------------VQCSDHM 272
            +S    DT    P  +    N+  +                           VQC+ HM
Sbjct: 239 SLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQSAIDGPGKWTGQPLVQCTSHM 298

Query: 273 CPVRVHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           CP+R+HWHV  NY  +WRVK+T++N+NY  NY+ WN++   P+
Sbjct: 299 CPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPN 338

[Close]

BLAST of Carg19367 vs. Swiss-Prot
Match: sp|Q75IW1|COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L2 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39
Identity = 91/279 (32.62%), Postives = 141/279 (50.54%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +  VT+ N+ ++RH++ PGW LGW W + E+IWSM+G  ATEQG+CS FK + PH C+
Sbjct: 52  GYVAVVTIYNFQKYRHIQAPGWSLGWAWAKKEIIWSMAGGQATEQGDCSAFKANIPHCCK 111

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDG-------- 152
             P ++DL+P A    +   CC+GGVL++   DP  +  SF+I+VG              
Sbjct: 112 RDPRVVDLVPGAPYNMQFGNCCKGGVLTSWVQDPLNAVASFQITVGHSGTSNKTVKAPKN 171

Query: 153 ---HEQPPANEHG-SQHVLTPCLWRT---RHHSVVSHSQHFTIPPSHPALHAAVVAEKQT 212
                  P    G +Q V  P  + +   R  +    + + T   S      A       
Sbjct: 172 FTLKAPGPGYSCGLAQEVKPPTRFISLDGRRTTQAHVTWNVTCTYSQFVAQRAPTCCVSL 231

Query: 213 KALYHVSL--------DTRQEHPLSTTDSSNDLAA--------------VQCSDHMCPVR 272
            + Y+ ++          + + P S  + ++   A              VQC+ HMCP+R
Sbjct: 232 SSFYNETIVNCPKCACGCQNKKPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHMCPIR 291

Query: 273 VHWHVMTNYINHWRVKLTVSNYNYNRNYSNWNILMPLPD 275
           VHWHV  NY ++WRVK+T++N+NY  NYS WN+++  P+
Sbjct: 292 VHWHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPN 330

[Close]

BLAST of Carg19367 vs. TrEMBL
Match: tr|A0A0A0K2H3|A0A0A0K2H3_CUCSA (COBRA-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G009200 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.1e-86
Identity = 178/308 (57.79%), Postives = 200/308 (64.94%), Query Frame = 0


Query: 1   MELRPRHLASPKVVSIPWILMEMLRLLTIFELGRLGRVTVQNYYQFRHVEKPGWKLGWTW 60
           ME R RHL SPK                       GRVTVQNYYQFRHVE PGWKLGWTW
Sbjct: 1   MEFRSRHLTSPK-----------------------GRVTVQNYYQFRHVENPGWKLGWTW 60

Query: 61  TRDEVIWSMSGAFATEQGNCSLFKFDTPHSCEESPVILDLMPEASPENRSEGCCRGGVLS 120
           TR EVIWSM+GAFATEQGNCSLFKFD PHSCE+SPVILDLMPEASPENRSEGCCR GVLS
Sbjct: 61  TRGEVIWSMNGAFATEQGNCSLFKFDIPHSCEDSPVILDLMPEASPENRSEGCCRSGVLS 120

Query: 121 ARAVDPSKSFTSFEISVGSMDEDGHEQPPAN----EHGSQHVLTPCL------------- 180
           A AVDPSKSF+SFEISVGS DEDG+EQPP N      G  +  +P L             
Sbjct: 121 AWAVDPSKSFSSFEISVGSTDEDGNEQPPVNITLMAPGPGYTCSPFLDSSPTISSVIDGK 180

Query: 181 --------WR-TRHHSVVSHSQ---------HFTIPPSHPALHAAVVAEKQTKALYHVSL 240
                   W+ T  +S+   ++          F  P   P    +    K +K+      
Sbjct: 181 REVQVFRTWKSTCTYSIFVDNKTPVCCVSLSAFYNPSITPCPSCSCGCRKASKSSVQC-- 240

Query: 241 DTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHVMTNYINHWRVKLTVSNYNYNRNYSN 274
            TR E+ LS+TDS+ +L++V+CSDHMCPVRVHWHV TNYINHWRVKLTVSNYNYNRNYSN
Sbjct: 241 -TRDEYQLSSTDSATNLSSVRCSDHMCPVRVHWHVKTNYINHWRVKLTVSNYNYNRNYSN 282

[Close]

BLAST of Carg19367 vs. TrEMBL
Match: tr|A0A1S4DWV5|A0A1S4DWV5_CUCME (COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103490406 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.2e-81
Identity = 182/388 (46.91%), Postives = 210/388 (54.12%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G +GRVT+QNYYQFRHVE PGWKL WTWTR EVIWSM+GAFATEQGNCSLFKFD PHSCE
Sbjct: 37  GYVGRVTIQNYYQFRHVENPGWKLAWTWTRGEVIWSMNGAFATEQGNCSLFKFDIPHSCE 96

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
           E PVILDLMPEAS  NRSEGCCR GVLSA AVD SKSF+SFEISVGS DEDG+E PPAN 
Sbjct: 97  ERPVILDLMPEASLGNRSEGCCRSGVLSAWAVDRSKSFSSFEISVGSKDEDGNELPPANI 156

Query: 153 ---EHGSQHVLTPCL---------------------WR-TRHHSVVSHSQ---------H 212
                G  +  +P L                     W+ T  +S+   ++          
Sbjct: 157 TLMAPGPGYTCSPFLDSHPTVSSVIDGKREVQVFRTWKSTCTYSIFVDNKTPVCCVSLSA 216

Query: 213 FTIPPSHPALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVH 272
           F  P   P    +    K  K+       TR E+ LS++DS+ +L++V+CSDHMCPVRVH
Sbjct: 217 FYNPSITPCPSCSCGCRKANKSSVQC---TRDEYQLSSSDSATNLSSVRCSDHMCPVRVH 276

Query: 273 WHVMTNYINHWRVKLTVSNYNYNRNYSNWNIL---------------------------- 300
           WHV TNYINHWRVKLTVSNYNYNRNYSNWNIL                            
Sbjct: 277 WHVETNYINHWRVKLTVSNYNYNRNYSNWNILVQHPGFGQSTEAFSFNSSQLPSLRYGDE 336

[Close]

BLAST of Carg19367 vs. TrEMBL
Match: tr|A0A068TLZ0|A0A068TLZ0_COFCA (COBRA-like protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014156001 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 124/269 (46.10%), Postives = 163/269 (60.59%), Query Frame = 0


Query: 38  VTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCEESPVI 97
           VT+QN+Y +RHV+KPGW++GWTW+++EVIWSMSGAFAT QGNCS FKF TPHSC + P I
Sbjct: 83  VTIQNFYLYRHVDKPGWRIGWTWSQNEVIWSMSGAFATHQGNCSSFKFQTPHSCMKYPDI 142

Query: 98  LDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN------ 157
           LD MP+A P+NRS+ CC+GG+L A A++PSKSF+SFE++VG++  +     P N      
Sbjct: 143 LDWMPDALPQNRSDACCKGGILDAWAINPSKSFSSFEMTVGNLGGNPTGYRPLNLTLLAP 202

Query: 158 ---------------------------EHGSQHVLTPCLWRTRHHSVVSHSQHFTIPPSH 217
                                       HG+QH  +  +W TR  SVV HSQHFT+    
Sbjct: 203 GPGYTCSPIIDTDPTVSSVVGGRREEQGHGNQHAHSRVIWLTRRQSVVFHSQHFTM---L 262

Query: 218 PALHAAVVAEKQTKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHVMTNY 274
           P LH+  +                            D   +QC+DHMCP+RVHWH+  N+
Sbjct: 263 PLLHSRTL----------------------------DTDILQCTDHMCPLRVHWHIKNNF 320

[Close]

BLAST of Carg19367 vs. TrEMBL
Match: tr|A0A059APZ8|A0A059APZ8_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01370 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.2e-63
Identity = 130/273 (47.62%), Postives = 168/273 (61.54%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G + RVT+QNY+Q+RH+EKPGWKLGWTW RDEVIW MSGAFA +QGNCS FKF  PHSC+
Sbjct: 51  GYMARVTIQNYHQYRHIEKPGWKLGWTWARDEVIWLMSGAFAAQQGNCSSFKFQIPHSCK 110

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
           ++PVILDL+P+ASPENRSE CC GG+LSA A+DPSKSF+SFEI VG+++       P N 
Sbjct: 111 KNPVILDLIPDASPENRSEDCCHGGLLSAWAIDPSKSFSSFEIQVGNLEGSSTGHAPLNL 170

Query: 153 ---EHGSQHVLTPC------------------LWRTRHHSVVSHSQHFTIPP-------- 212
                G  +   P                   ++RT   + +  S      P        
Sbjct: 171 TLMAPGPGYTCGPLVDTDPTVSSDIGGRREVQVFRTWKSTCIYSSFLANKAPVCCVSLST 230

Query: 213 -SHPALHAAVVAEKQTK-ALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHV 272
             +P + +        K A  + S    +   L  +D+ +D   VQC++H CPVRVHWH+
Sbjct: 231 FYNPRITSCPTCSCGCKDAGPNTSFCISEGTALPQSDALSDTDVVQCTNHNCPVRVHWHL 290

Query: 273 MTNYINHWRVKLTVSNYNYNRNYSNWNILMPLP 274
             NY++HWRVKLTVSNYNY RNYS+WN+L+  P
Sbjct: 291 KNNYLDHWRVKLTVSNYNYKRNYSSWNVLVQHP 323

[Close]

BLAST of Carg19367 vs. TrEMBL
Match: tr|A0A2C9V0X6|A0A2C9V0X6_MANES (COBRA-like protein OS=Manihot esculenta OX=3983 GN=MANES_11G089400 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 127/272 (46.69%), Postives = 164/272 (60.29%), Query Frame = 0


Query: 33  GRLGRVTVQNYYQFRHVEKPGWKLGWTWTRDEVIWSMSGAFATEQGNCSLFKFDTPHSCE 92
           G L RVT+QNYYQ+RHV+KPGW +GW WT+ E+IWS+SGAFAT QG+CS FK   PHSC+
Sbjct: 50  GYLARVTIQNYYQYRHVDKPGWSIGWAWTQKEIIWSISGAFATVQGDCSAFKHQIPHSCQ 109

Query: 93  ESPVILDLMPEASPENRSEGCCRGGVLSARAVDPSKSFTSFEISVGSMDEDGHEQPPAN- 152
             PVI DL P+ASPEN SE CCRGG+LSA A+DPS SF+SFEI+VG++D +    PPAN 
Sbjct: 110 PKPVIADLTPDASPENTSENCCRGGLLSAWAIDPSNSFSSFEITVGNLDINATLHPPANL 169

Query: 153 ------------------------EHGSQHVLTPCLWRT--RHHSVVSHSQHFTIPPSHP 212
                                     G + V     W++   + S +++ +         
Sbjct: 170 TLSAPGPGYTCGPVTDTNPTESLDIGGRRKVQVYKTWKSTCTYSSFLANKKPVCCVSLST 229

Query: 213 ALHAAVVAEKQ----TKALYHVSLDTRQEHPLSTTDSSNDLAAVQCSDHMCPVRVHWHVM 272
             +  V    +     K     +++   E   S+    N L  VQC+DHMCPVRVHWHV 
Sbjct: 230 FYNRKVTTCPECSCGCKETNQNAVECISEGSSSSLSDLNSLDMVQCTDHMCPVRVHWHVK 289

Query: 273 TNYINHWRVKLTVSNYNYNRNYSNWNILMPLP 274
            NY++HWRVK+TVSNYNY RNYSNWN+L+  P
Sbjct: 290 NNYMSHWRVKITVSNYNYKRNYSNWNVLVQHP 321

The following BLAST results are available for this feature:

BLAST of Carg19367 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953022.1	5.0e-102	56.04	COBRA-like protein 1, partial [Cucurbita moschata]	[more]
KGN43224.1	1.7e-86	57.79	hypothetical protein Csa_7G009200 [Cucumis sativus]	[more]
XP_011659689.1	1.5e-85	61.59	PREDICTED: COBRA-like protein 2 [Cucumis sativus]	[more]
XP_016900461.1	6.4e-81	46.91	PREDICTED: COBRA-like protein 2, partial [Cucumis melo]	[more]
XP_022135670.1	1.1e-77	45.76	COBRA-like protein 2 [Momordica charantia]	[more]

BLAST of Carg19367 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G29810.1	2.6e-44	35.14	COBRA-like protein 2 precursor	[more]
AT3G02210.1	2.7e-41	33.21	COBRA-like protein 1 precursor	[more]
AT5G15630.1	7.9e-41	32.45	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT1G09790.1	2.3e-40	34.42	COBRA-like protein 6 precursor	[more]
AT5G60920.1	8.7e-40	31.21	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]

BLAST of Carg19367 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L8Q7\|COBL2_ARATH	4.7e-43	35.14	COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2	[more]
sp\|Q6Z4G8\|COBL1_ORYSJ	8.0e-43	34.64	COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1	[more]
sp\|Q9SRT7\|COBL1_ARATH	4.9e-40	33.21	COBRA-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=COBL1 PE=2 SV=1	[more]
sp\|Q60E70\|COBL3_ORYSJ	6.4e-40	33.22	COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1	[more]
sp\|Q75IW1\|COBL2_ORYSJ	1.4e-39	32.62	COBRA-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L2 PE=2 SV=1	[more]

BLAST of Carg19367 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2H3\|A0A0A0K2H3_CUCSA	1.1e-86	57.79	COBRA-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G009200 PE=3 SV=1	[more]
tr\|A0A1S4DWV5\|A0A1S4DWV5_CUCME	4.2e-81	46.91	COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103490406 PE=3 SV=1	[more]
tr\|A0A068TLZ0\|A0A068TLZ0_COFCA	2.8e-64	46.10	COBRA-like protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014156001 PE=3 SV=1	[more]
tr\|A0A059APZ8\|A0A059APZ8_EUCGR	5.2e-63	47.62	Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01...	[more]
tr\|A0A2C9V0X6\|A0A2C9V0X6_MANES	1.2e-62	46.69	COBRA-like protein OS=Manihot esculenta OX=3983 GN=MANES_11G089400 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010215	cellulose microfibril organization
GO:0016049	cell growth

Vocabulary: **Cellular Component**
Term	Definition
GO:0031225	anchored component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR006918	COBRA_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0010215	cellulose microfibril organization
cellular_component	GO:0031225	anchored component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19367-RA	Carg19367-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 37..151 e-value: 9.4E-42 score: 142.6
IPR006918	COBRA, plant	PIRSF	PIRSF038122	COBRA	coord: 19..156 e-value: 8.5E-43 score: 140.2 coord: 183..270 e-value: 7.5E-23 score: 74.4 coord: 268..299 e-value: 0.017 score: 7.3
IPR006918	COBRA, plant	PANTHER	PTHR31673	FAMILY NOT NAMED	coord: 27..151
IPR006918	COBRA, plant	PANTHER	PTHR31673	FAMILY NOT NAMED	coord: 193..269
IPR006918	COBRA, plant	PRODOM	PD140986		coord: 33..138 e-value: 3.0E-30 score: 330.0
None	No IPR available	PANTHER	PTHR31673:SF9	SUBFAMILY NOT NAMED	coord: 193..269
None	No IPR available	PANTHER	PTHR31673:SF9	SUBFAMILY NOT NAMED	coord: 27..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19367	CmaCh19G007230	Cucurbita maxima (Rimu)	carcmaB0440
Carg19367	CmoCh19G007320	Cucurbita moschata (Rifu)	carcmoB0433
Carg19367	Lsi11G011780	Bottle gourd (USVL1VR-Ls)	carlsiB290
Carg19367	Cp4.1LG15g05850	Cucurbita pepo (Zucchini)	carcpeB0436
Carg19367	CsGy7G000590	Cucumber (Gy14) v2	carcgybB0326
Carg19367	MELO3C029039.2	Melon (DHL92) v3.6.1	carmedB0330
Carg19367	Cla97C02G031160	Watermelon (97103) v2	carwmbB0324
Carg19367	Bhi05G001500	Wax gourd	carwgoB0397

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19367	Silver-seed gourd	carcarB342
Carg19367	Silver-seed gourd	carcarB343
Carg19367	Cucumber (Gy14) v2	carcgybB0325
Carg19367	Cucumber (Gy14) v1	carcgyB0373
Carg19367	Cucurbita maxima (Rimu)	carcmaB0439
Carg19367	Cucurbita maxima (Rimu)	carcmaB0441
Carg19367	Cucurbita maxima (Rimu)	carcmaB0442
Carg19367	Cucurbita maxima (Rimu)	carcmaB0443
Carg19367	Cucurbita moschata (Rifu)	carcmoB0432
Carg19367	Cucurbita moschata (Rifu)	carcmoB0435
Carg19367	Cucurbita moschata (Rifu)	carcmoB0436
Carg19367	Cucurbita pepo (Zucchini)	carcpeB0437
Carg19367	Cucurbita pepo (Zucchini)	carcpeB0439
Carg19367	Cucurbita pepo (Zucchini)	carcpeB0440
Carg19367	Wild cucumber (PI 183967)	carcpiB0347
Carg19367	Wild cucumber (PI 183967)	carcpiB0348
Carg19367	Cucumber (Chinese Long) v2	carcuB0341
Carg19367	Cucumber (Chinese Long) v2	carcuB0342
Carg19367	Cucumber (Chinese Long) v3	carcucB0346
Carg19367	Cucumber (Chinese Long) v3	carcucB0347
Carg19367	Bottle gourd (USVL1VR-Ls)	carlsiB289
Carg19367	Melon (DHL92) v3.5.1	carmeB0319
Carg19367	Melon (DHL92) v3.5.1	carmeB0321
Carg19367	Melon (DHL92) v3.6.1	carmedB0328
Carg19367	Watermelon (Charleston Gray)	carwcgB0308
Carg19367	Watermelon (97103) v1	carwmB0305