Carg19099 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19099
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Wound-responsive family protein
Location	Cucurbita_argyrosperma_scaffold_112 : 182216 .. 186087 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTAAAGGATCAAGGGATTTGCCGGTGGAATAACGTCATAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCACTTTCTCAGGCCAAGAAGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGGTCCTAATAATTGAACCGCCTCGGAGCTTCAAAGATACGCTTGAAAAACATTTATATCGAGACTACGGCGGAACCAGCGGCGGTTCGAGCGGAGTGACACCGCCGGGCGCGGTGGTGGAGTTGTTGAGCTGATTATAGATATTGATATGGTTTGGGGATGTAATTAATGGGATGCTTTGGGCGTTTGATTCTTATATGAACAATTGTAATTAATGTAATGCTTTGGGCGTTCTTGTTTCTTTATTAAATACAATTGATTCCTAATTCTTAATGTTACCAATTACTAACCTATACTAATTTGGTTACGATTCCACAACTTACCCTCTCGATCTAGATAAAAATTTCAAAAGATTCGACCGCGAGGGCTCAATTTCACAAACAAAGTGAGCTCGAGTTAGGGTTTTTTTTCTCGATCTTTCTCTAATTCTAATCGTGGAGTTGGATTCAACGTTAGTCGGTTAAAAAGAGGACCCTATTTTTCATTTCGACTAGAAACATGTGAATTTAGGGTTCTTCGTTAATCCATTTACGCCCGACTAGAAACACGTGAATTTAGGAAATTCGGCTCGTGAATAGTTTCTTAATAATAGAATCCTTCTTCATTAATCCATTTAGGTTCGATTAGAAACACGTGGATTCAAGAAACCCAGCTCAAGAAATATTGTTCCATTTAGGCTCGATTAGGAACACGTGATCGAACACATGATTCAATAATATGTTTTTAGTCACTCAAAGGAGTGATAAACGATAATAATTAATCTTAATTAATCTTAAATAAAAAGAAAAAAGGAGTGAGAAATGACAACAATACCCCTCCCGTACAATGTACCCTGTTTCACAAAGAGCGGCAGAATCCGCCAGTTTCAAGCCCAACTCCTCCGGTTTAGAAAGGCAGTTTCTCCCGAATAATTCCAACTTTACCCCTCACATTGCTGTCAAAAGAACCCGGCCTCTAGGGGCAATCAAGTCCAAGAATTATTTACAACGTATTTATTATAATAATAAGAAATATAATCCTGGTCTCCATTAGTCACCTTTAGCTAATAAAAGAATTTCCTTTTCTACAGGTATTACAAGACCATGAGGTCCAGATCCATAGATAGTAGATATTGTCTTTTTTGGGTTTTCTCTTTCGAATTTTTCCTGAATGCTTTAAATCGCGTCTACTCGGAGAAAGTTTCATAAGAGTGATTTGTTCTCCTCCCCACAAATTATATATATGGGAATTTAAAATAAAAAAGAAACCCATTTGAGAGGAGGAAATCAGCCGGTCGCGGCGGTTTACTTTCCTCGCTTCCCGGAATTCAAAACCAGGTGCCCAGTGGAATTAAAGAAAAAAACCAGGGGCCTTTTTGGAATAATCTCTATAAAACTCTCAAAATATTCCAACATTTCAGAACAGAGACAGAACAGAGATGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTTCTTGAGCTGTTGGGGTCCTAATAATTGACCCACCACCCCAGATTGTTCTTCTTAGGAAAGCTTTTGTATAAATTTCATTCAACATTTTTGATAAATTTTAATGAATGATTTTATTTTTGGTTTAAAATAAGATTTAAAATTTTTAATATGATAAGTGTTGGTTGATAATTACATTTATAATGAGTAATTAATATCTTTTGTCCTTGTTGAATGGACCAACCTTATCCGCAAATTAAGAACGGGCCCACTTAATAGATTCGTTGTCTGAGGATTTAGAATCTAGACCCACCAGATATTGTCATACGACATGATCATATTACTTACTTTTTCACTTCTAAGAGTAAAGACTATTCCCACCGACCAACACGAGTTATTCCATCATATTTTGTAAGAGATCACCCAACATAGAATTGATCCGAGTAAAGGACGTTCCGTTGTGGTATTTGATTCATTTATGTACCCCTCATTTACTCCGCACTATTTCTGTGGGTACAAAAAGAATTCTCTTCTTTATAGATAATCTTTTTTGGGAGGAATAATATCTATTCTTTCTTTCTATATGCTCGACATAGTTAAGAACAGTAGATTCTACCGTGCATATGCTATAGTTCTTTTTGTTAAAAGAGAATTCATTGTATGATTCAAGATCTAAATTTGTTCTCTCGAGTAGCTCTCTCCGTGCAAGAGGATAATTTTAACTACACAATTATGAAATTTCATCTTAGTTAGGGGTTTCGGGTTGAAGATTATAAAATATACGTGGCGGGTTCTTCTCTCTGAACCAATTCGAGTGATGATGATGATGATTGTGAGATCCCACATTGATTGGAGGAGGAACGAAATATTCCTTATAAGGGTGCAAAAGTCTCTCCGTAGCAAACGCGTTTTAACACCTTGAGGCTGATGGCGATACTTAATGAGCCAAAACAGACAATATCTGCCGGCAGTGGGCTTGGGGCTGTTACAAAAGGTATCAGAGTTAGAGTCCAAGCAGTGTGCCAATGAGGACACTGGGTCTCGAGGGGAGTGGATTGTGAGATCACACATCAGATCCTACATCAGTGGTAGGGGAAACGAAGCATTCTTTATAAGGGTGTGGGAACCTCTTCCTAACCGACACATTTCAAAATCGTAAGACTAACAGCAATACGTAACAGGCCAAAGAGGACAATATCTACTAGCGATAGGGTTCGGTTATTATAATGATGATGCTCGGAAATATGCTCACTGCTTGAGAGATTTCATTATAAAATGAAGGCTCTCAAGTGAGTTTCTTTCTCACGTCATAGTCGAAAAGACGAGTAAAAGAAACATTAGACCTTATCCGTGGTGGAGTGTTTCGAAAATCGTTCAAATCGGTAGAGTTAGATAGCAACACACAAACAAGACAACAAAATCAGTGGGTGAGAAGCGAGTGGTTTGCTTCTCATACTTTGGGCTCATCCTCAACCCTAATTTCACAAAAATGATCCACATTTTCCCATTTTTACCCTCCACCATTCACCAACCTACACATCATCACAAGGGCAATCCAGTCATTTCACATCAAGTGAAGAACCCACCACCTTGTACGAACTCAGTTTTTCAATGATTAGCCAGAGGTTTTCCCCATTCCACGTTCTCCAAAACACATCTATATAAACCAACCAAACCCTTTTAACCTTAATTTCATCAAACTGTACGACACAAACAAGAACAACCAAAATGTGTAGCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCTGCCCTCGTCGTCGTCACCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

mRNA sequence

ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTAAAGGATCAAGGGATTTGCCGGTGGAATAACGTCATAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCACTTTCTCAGGCCAAGAAGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGAGATGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCTGCCCTCGTCGTCGTCACCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

Coding sequence (CDS)

ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTAAAGGATCAAGGGATTTGCCGGTGGAATAACGTCATAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCACTTTCTCAGGCCAAGAAGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGAGATGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCTGCCCTCGTCGTCGTCACCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

Protein sequence

MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSSAAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVIGKYWTTAAAASIGAVEALKDQGHLCRWNSAVRALSQPNKLPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMYLSCWGPY

Homology

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: PPS09223.1 (hypothetical protein GOBAR_AA11414 [Gossypium barbadense])

HSP 1 Score: 163.7 bits (413), Expect = 8.0e-37
Identity = 103/176 (58.52%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 149
           MSS+  AW+VAAS+G VEALKDQG+CRWN+T+RSV Q+AK+HVRSASQ K LSS SS A+
Sbjct: 1   MSSTSRAWIVAASIGAVEALKDQGICRWNYTVRSVAQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 150 SD--QKWKQSEESLRTVIGKYWTTA----------AAASIGAVEALKDQGHLCRWNSAVR 209
           S    K KQSEESLRTVI K    A           AASIGAVEALKDQG +CRWN  VR
Sbjct: 61  SKGLNKSKQSEESLRTVIIKITVFARMSSSSRAWIVAASIGAVEALKDQG-ICRWNYTVR 120

Query: 210 ALSQPNK-------LPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMYLSCWGP 247
           ++ Q  K           L S SS A+     +  +  KQSEESLRTVMYLSCWGP
Sbjct: 121 SVVQHAKNHVRLASQAKNLSSQSSAAI----SKGLNNSKQSEESLRTVMYLSCWGP 171

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: OIV96747.1 (hypothetical protein TanjilG_11743 [Lupinus angustifolius])

HSP 1 Score: 161.8 bits (408), Expect = 3.0e-36
Identity = 93/168 (55.36%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 2   SSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKXXXXXXXXXX 61
           S +   AW+VA SVGVVEALKDQG+CRWN  +R AQ + K HV SLSQAK          
Sbjct: 3   SCATSKAWIVATSVGVVEALKDQGLCRWNYALRCAQQHLKTHVRSLSQAK---NVPSTSS 62

Query: 62  XXXXXXXXXXXXXXXXLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTI 121
                           LRTVMYLSCW     S  AWVVA SVG+VE LKDQG+CRWN T 
Sbjct: 63  LVARKKGAKVKQAEESLRTVMYLSCW---GPSMKAWVVATSVGIVETLKDQGICRWNSTF 122

Query: 122 RSVQQYAKSHVRSASQVKKLSSPSSPAVS----DQKWKQSEESLRTVI 166
           +S QQ+ KSHVRS SQ KK+SS SS  +S    D+K KQS+ESLRTV+
Sbjct: 123 KSAQQHVKSHVRSLSQAKKVSSSSSAMISRKLKDEKAKQSQESLRTVM 164

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: XP_022930885.1 (uncharacterized protein LOC111437236 isoform X1 [Cucurbita moschata])

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 149
           MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV
Sbjct: 8   MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 67

Query: 150 SDQKWKQSEESLRTVI 166
           SDQKWKQSEESLRTV+
Sbjct: 68  SDQKWKQSEESLRTVM 83

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: XP_022930886.1 (uncharacterized protein LOC111437236 isoform X2 [Cucurbita moschata])

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 149
           MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV
Sbjct: 1   MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 60

Query: 150 SDQKWKQSEESLRTVI 166
           SDQKWKQSEESLRTV+
Sbjct: 61  SDQKWKQSEESLRTVM 76

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: ONK74636.1 (uncharacterized protein A4U43_C03F8530 [Asparagus officinalis])

HSP 1 Score: 140.6 bits (353), Expect = 7.2e-30
Identity = 89/171 (52.05%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVK-KLSSPSSP 149
           +S SR  W+VAASVG VEALKDQ G+CRWN+ +RS+ Q+AKS + S+SQ K + S+ +S 
Sbjct: 3   ISGSRAPWIVAASVGAVEALKDQAGLCRWNYVLRSLHQHAKSSIGSSSQFKRRFSAAASS 62

Query: 150 AV-------SDQKWKQSEESLRTVIGKYWTTAAAASIGAVEALKDQGHLCRWNSAVRALS 209
           A+       +++K +QSEESLR VI  +     AAS+GAVEALKDQ  LCRWN A+R+L 
Sbjct: 63  AIDGLREVRTEEKARQSEESLRKVIASW---IVAASVGAVEALKDQAGLCRWNHALRSLH 122

Query: 210 Q-PNKLPPPLPSSSSPA--VRDCREE--DHSKPKQSEESLRTVMYLSCWGP 247
           Q  +K      +S++ A  +   R+E     K KQSEESLR VMYLSCWGP
Sbjct: 123 QHASKANNKRMASAAAANSIERLRKERITEEKAKQSEESLRKVMYLSCWGP 170

[Close]

BLAST of Carg19099 vs. TAIR10
Match: AT4G10265.1 (Wound-responsive family protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-16
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPA 149
           MSS+   W+VAAS+G VEALKDQ GVCRWN+ IRS  QY ++++RS SQ KKLSS S   
Sbjct: 1   MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 150 VSDQKWKQSEESLRTVI 166
            +  K KQ+EESLRTV+
Sbjct: 61  TN--KTKQAEESLRTVM 75

[Close]

BLAST of Carg19099 vs. TAIR10
Match: AT4G10270.1 (Wound-responsive family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPA 149
           MSS+  AW VA S+G VEALKDQ G+CRWN+ +RSV Q+ +++VRS SQ K+ SS S  A
Sbjct: 1   MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 150 V-----SDQKWKQSEESLRTVI 166
                   +K K++EESLRTV+
Sbjct: 61  AVTSSGESEKAKKAEESLRTVM 82

[Close]

BLAST of Carg19099 vs. TAIR10
Match: AT4G33560.1 (Wound-responsive family protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.6e-05
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 89  MMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSS 147
           M +  + +W VA ++  VE LKDQGV RWN+  R + + A + VR+ +   + S P+S
Sbjct: 1   MNAGKQASWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTS 58

[Close]

BLAST of Carg19099 vs. TrEMBL
Match: tr|A0A2P5Y0V7|A0A2P5Y0V7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11414 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.3e-37
Identity = 103/176 (58.52%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 149
           MSS+  AW+VAAS+G VEALKDQG+CRWN+T+RSV Q+AK+HVRSASQ K LSS SS A+
Sbjct: 1   MSSTSRAWIVAASIGAVEALKDQGICRWNYTVRSVAQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 150 SD--QKWKQSEESLRTVIGKYWTTA----------AAASIGAVEALKDQGHLCRWNSAVR 209
           S    K KQSEESLRTVI K    A           AASIGAVEALKDQG +CRWN  VR
Sbjct: 61  SKGLNKSKQSEESLRTVIIKITVFARMSSSSRAWIVAASIGAVEALKDQG-ICRWNYTVR 120

Query: 210 ALSQPNK-------LPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMYLSCWGP 247
           ++ Q  K           L S SS A+     +  +  KQSEESLRTVMYLSCWGP
Sbjct: 121 SVVQHAKNHVRLASQAKNLSSQSSAAI----SKGLNNSKQSEESLRTVMYLSCWGP 171

[Close]

BLAST of Carg19099 vs. TrEMBL
Match: tr|A0A1J7G8S9|A0A1J7G8S9_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11743 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.0e-36
Identity = 93/168 (55.36%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 2   SSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKXXXXXXXXXX 61
           S +   AW+VA SVGVVEALKDQG+CRWN  +R AQ + K HV SLSQAK          
Sbjct: 3   SCATSKAWIVATSVGVVEALKDQGLCRWNYALRCAQQHLKTHVRSLSQAK---NVPSTSS 62

Query: 62  XXXXXXXXXXXXXXXXLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTI 121
                           LRTVMYLSCW     S  AWVVA SVG+VE LKDQG+CRWN T 
Sbjct: 63  LVARKKGAKVKQAEESLRTVMYLSCW---GPSMKAWVVATSVGIVETLKDQGICRWNSTF 122

Query: 122 RSVQQYAKSHVRSASQVKKLSSPSSPAVS----DQKWKQSEESLRTVI 166
           +S QQ+ KSHVRS SQ KK+SS SS  +S    D+K KQS+ESLRTV+
Sbjct: 123 KSAQQHVKSHVRSLSQAKKVSSSSSAMISRKLKDEKAKQSQESLRTVM 164

[Close]

BLAST of Carg19099 vs. TrEMBL
Match: tr|F6HHI8|F6HHI8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0057g00100 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 100/172 (58.14%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 90  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV 149
           MS  R AW+VAASVG VEALKDQG CRWN+T+RS+ Q+AK+++RS SQ KKLSS SS  V
Sbjct: 1   MSHMRKAWIVAASVGAVEALKDQGFCRWNYTMRSIHQHAKNNLRSFSQAKKLSSSSSAMV 60

Query: 150 S----DQKWKQSEESLRTVIGKYWTTAAAASIGAVEALKDQGHLCRWNSAVRAL------ 209
           S    D+K KQSEESLRTV+        ++S+GAVEALKDQG  CRWN  +R++      
Sbjct: 61  SSRVRDEKAKQSEESLRTVM------YLSSSVGAVEALKDQG-FCRWNYTLRSIHQHAKN 120

Query: 210 -----SQPNKLPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMYLSCWGP 247
                SQ  KL     SSSS A+   R  D  K KQSEESLRTVMYLSCWGP
Sbjct: 121 NLRSFSQARKL-----SSSSSAMVSSRMRD-EKAKQSEESLRTVMYLSCWGP 159

[Close]

BLAST of Carg19099 vs. TrEMBL
Match: tr|A0A2P4JTU7|A0A2P4JTU7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_76435 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.1e-29
Identity = 80/180 (44.44%), Postives = 109/180 (60.56%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKXXXXXXXXXXX 62
           +S   AW+VA+S+  VE LKDQG+CRWN V+RS   +AKN++ S  QAK           
Sbjct: 2   NSACKAWIVASSIAAVETLKDQGVCRWNFVMRSVHQHAKNNIRSYYQAK-----KLSAQS 61

Query: 63  XXXXXXXXXXXXXXXLRTVMYLSCW-------------EMMSSSRTAWVVAASVGLVEAL 122
                          +R V+ LSCW              M ++S+ +W+VAAS+G VEAL
Sbjct: 62  SSAISNTIMRSKEESMRKVLDLSCWGPNTTSSDLERERSMSATSKASWMVAASIGAVEAL 121

Query: 123 KDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVS----DQKWKQSEESLRTVI 166
           KDQGVCRWN+ +RS+ Q+AK+++RS  Q KKLS+ SS A+S    ++K KQSEESLR V+
Sbjct: 122 KDQGVCRWNYPLRSLHQHAKNNIRSYYQAKKLSAQSSSAISSKVNNEKLKQSEESLRKVM 176

[Close]

BLAST of Carg19099 vs. TrEMBL
Match: tr|A0A2P4IAG1|A0A2P4IAG1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_70958 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28
Identity = 79/180 (43.89%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKXXXXXXXXXXX 62
           +S   AW+VA+S+  VE LKDQG+CRWN V+RS   +AKN++ S  QAK           
Sbjct: 2   NSACKAWIVASSIAAVETLKDQGVCRWNFVMRSVHQHAKNNIRSYYQAK-----KLSAQS 61

Query: 63  XXXXXXXXXXXXXXXLRTVMYLSCW-------------EMMSSSRTAWVVAASVGLVEAL 122
                          +R V+ LSCW              M ++S+ +W+VAAS+G VEAL
Sbjct: 62  SSAISNTIMRSKEESMRKVLDLSCWGPNTTSSNLEQEISMSATSKASWMVAASIGAVEAL 121

Query: 123 KDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVS----DQKWKQSEESLRTVI 166
           KDQGVCRWN+ +RS+ Q+AK+++RS  Q KKLS+ SS  +S    ++K KQSEESLR V+
Sbjct: 122 KDQGVCRWNYPLRSLHQHAKNNIRSYYQAKKLSAQSSSVISSKVNNEKLKQSEESLRKVM 176

The following BLAST results are available for this feature:

BLAST of Carg19099 vs. NCBI nr


Match Name	E-value	Identity	Description
PPS09223.1	8.0e-37	58.52	hypothetical protein GOBAR_AA11414 [Gossypium barbadense]	[more]
OIV96747.1	3.0e-36	55.36	hypothetical protein TanjilG_11743 [Lupinus angustifolius]	[more]
XP_022930885.1	1.3e-31	98.68	uncharacterized protein LOC111437236 isoform X1 [Cucurbita moschata]	[more]
XP_022930886.1	1.3e-31	98.68	uncharacterized protein LOC111437236 isoform X2 [Cucurbita moschata]	[more]
ONK74636.1	7.2e-30	52.05	uncharacterized protein A4U43_C03F8530 [Asparagus officinalis]	[more]

BLAST of Carg19099 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10265.1	2.5e-16	61.04	Wound-responsive family protein	[more]
AT4G10270.1	1.8e-14	53.66	Wound-responsive family protein	[more]
AT4G33560.1	2.6e-05	37.93	Wound-responsive family protein	[more]

BLAST of Carg19099 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19099 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5Y0V7\|A0A2P5Y0V7_GOSBA	5.3e-37	58.52	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11414 PE=4 SV...	[more]
tr\|A0A1J7G8S9\|A0A1J7G8S9_LUPAN	2.0e-36	55.36	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11743 PE=4 S...	[more]
tr\|F6HHI8\|F6HHI8_VITVI	1.3e-35	58.14	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0057g00100 PE=4 SV=...	[more]
tr\|A0A2P4JTU7\|A0A2P4JTU7_QUESU	4.1e-29	44.44	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_76435 PE=4 SV=1	[more]
tr\|A0A2P4IAG1\|A0A2P4IAG1_QUESU	1.2e-28	43.89	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_70958 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022251	DUF3774_wound-induced

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19099-RA	Carg19099-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 99..165 e-value: 1.4E-22 score: 80.4 coord: 174..246 e-value: 2.9E-23 score: 82.6 coord: 11..87 e-value: 9.7E-29 score: 100.1
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	FAMILY NOT NAMED	coord: 172..247
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	FAMILY NOT NAMED	coord: 90..165 coord: 1..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..232
None	No IPR available	PANTHER	PTHR33090:SF8	SUBFAMILY NOT NAMED	coord: 172..247 coord: 1..87
None	No IPR available	PANTHER	PTHR33090:SF8	SUBFAMILY NOT NAMED	coord: 90..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19099	Cla007722	Watermelon (97103) v1	carwmB0718
Carg19099	Csa7G046640	Cucumber (Chinese Long) v2	carcuB0739
Carg19099	MELO3C018766	Melon (DHL92) v3.5.1	carmeB0715
Carg19099	ClCG02G001320	Watermelon (Charleston Gray)	carwcgB0696
Carg19099	CSPI07G04250	Wild cucumber (PI 183967)	carcpiB0755
Carg19099	Cucsa.147980	Cucumber (Gy14) v1	carcgyB0810
Carg19099	CmaCh19G009600	Cucurbita maxima (Rimu)	carcmaB1008
Carg19099	CmaCh11G018550	Cucurbita maxima (Rimu)	carcmaB1006
Carg19099	CmoCh19G009920	Cucurbita moschata (Rifu)	carcmoB0981
Carg19099	CmoCh11G019320	Cucurbita moschata (Rifu)	carcmoB0979
Carg19099	Lsi11G015120	Bottle gourd (USVL1VR-Ls)	carlsiB659
Carg19099	Cp4.1LG15g07870	Cucurbita pepo (Zucchini)	carcpeB1013
Carg19099	Cp4.1LG04g03370	Cucurbita pepo (Zucchini)	carcpeB1015
Carg19099	CsGy7G003880	Cucumber (Gy14) v2	carcgybB0717
Carg19099	MELO3C018766.2	Melon (DHL92) v3.6.1	carmedB0728
Carg19099	CsaV3_7G004090	Cucumber (Chinese Long) v3	carcucB0758
Carg19099	Cla97C02G027750	Watermelon (97103) v2	carwmbB0752
Carg19099	Bhi05G001570	Wax gourd	carwgoB0847

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19099	Carg19210	Silver-seed gourd	carcarB590

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19099	Silver-seed gourd	carcarB035
Carg19099	Silver-seed gourd	carcarB176
Carg19099	Cucumber (Gy14) v1	carcgyB0809
Carg19099	Cucurbita maxima (Rimu)	carcmaB1010
Carg19099	Cucurbita moschata (Rifu)	carcmoB0980
Carg19099	Cucurbita moschata (Rifu)	carcmoB0983
Carg19099	Cucurbita pepo (Zucchini)	carcpeB1012
Carg19099	Cucurbita pepo (Zucchini)	carcpeB1016
Carg19099	Bottle gourd (USVL1VR-Ls)	carlsiB657
Carg19099	Wax gourd	carwgoB0849