Carg19085 (gene) Silver-seed gourd

NameCarg19085
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptioncysteine-rich repeat secretory protein 38-like
LocationCucurbita_argyrosperma_scaffold_112 : 120134 .. 121441 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCGCCTCCAAGTCAGGTCAAATTCGAGAAGGTCACGAAGGACGATTCGTCACTAGAGACCGGTGTGTTTATAGTTGGATACAGATAAAAGAAAATATATTTGTTACCTAAATATTGGATACATAAACACAATATTCTTACCATTTTCCCTCTTGTACATCCAACAATGCACTTTTAAATTGTAGGGGTAGTTTTATCGAATAATTTTTTCAAACAAGTGGGATGCTATTAATGCAAGCAGGTCGAGACCTTTATGTCACCCAATTGCCTTCACCTCGACATGCTTCGGGCTTGGGGTCAAACACGTGTCGGTTGGCTATTGGGCTATAGAAAAGTCGTATGATTTGACTCATAACTATAGTTTTTGAATGATATCTATATATTGTGGTGAATACGTTCAACAATCTTTTGTTAATACAAAAGTTAAGAATACTCGATATTTTTTAATTTTCTTCTAGAAGGTTGACTCAGCTTGGTTTGAACTTGATTGGCATCAACACTAACCCAACTAAGAAAATTATGGAGGCCACATTAATTCATGAAAATGACACCTATTCAACGTTACCAGGACATCAATTATTAAATTCAACAATTTCAACTCCATTATTTGACTATACACACTTGTTGACCTTTTTTCTTTTTCTTTTTTTTGTAAAAATCAAGTCAACAAGTCGACTCTATACTGTGGTGACGGTTTACCCACCGATTACGAGAACTGCATCACCACAACTAGATAAGTGATCCAACGACGACGTCCTCATTAAAAAAAGAGATGATTTTTGTCACTTCAAATATTTCAATACCCAAACAAATAATCCTAAGTAGTTTAATTGGCTAAGTCAAGATTCGACAACTACATCATGAATAACATCTACACTTCCAACTTATGACTACTTGACCAATAGTGTCTCATCCTCTAGCCTCGACCTTAGCTCGACAAGGGCGAAGGTTGACAAAATCAAGTCAATGGGCTAGTTCTATGTCGCACGGATATCTCACCACCAGAAAAGAGATCCAACATCGATTCGGTTACAAGAAAGACTCCAACATATGGTACGATTGCGGCCTCTTGAAATACTTCAATGCCAAATTCTTTGGGAAGAACCAAAATGGAGGGTTTAGATTCTACTTGAGGAACGTCCAAGAGGTGGATGATCCAACGTCGTTTATAGACCAAGTAAAGAACTTACTTGATGATGCCATTGCTGAGCTTCCATATTGGTGTGCAAATGGAGCTGAAGTTGGAGGAAGAGTGGTCGGTGGGAGTTGTAACTTTTTTTTGTCGAAGTTTGATCAACTTTGA

mRNA sequence

ATGCCACCGCCTCCAAGTCAGGTCAAATTCGAGAAGGTCACGAAGGACGATTCGTCACTAGAGACCGTGTCTCATCCTCTAGCCTCGACCTTAGCTCGACAAGGGCGAAGGTTGACAAAATCAAGTCAATGGGCTAGTTCTATGTCGCACGGATATCTCACCACCAGAAAAGAGATCCAACATCGATTCGGTTACAAGAAAGACTCCAACATATGGTACGATTGCGGCCTCTTGAAATACTTCAATGCCAAATTCTTTGGGAAGAACCAAAATGGAGGGTTTAGATTCTACTTGAGGAACGTCCAAGAGGTGGATGATCCAACGTCGTTTATAGACCAAGTAAAGAACTTACTTGATGATGCCATTGCTGAGCTTCCATATTGGTGTGCAAATGGAGCTGAAGTTGGAGGAAGAGTGGTCGGTGGGAGTTGTAACTTTTTTTTGTCGAAGTTTGATCAACTTTGA

Coding sequence (CDS)

ATGCCACCGCCTCCAAGTCAGGTCAAATTCGAGAAGGTCACGAAGGACGATTCGTCACTAGAGACCGTGTCTCATCCTCTAGCCTCGACCTTAGCTCGACAAGGGCGAAGGTTGACAAAATCAAGTCAATGGGCTAGTTCTATGTCGCACGGATATCTCACCACCAGAAAAGAGATCCAACATCGATTCGGTTACAAGAAAGACTCCAACATATGGTACGATTGCGGCCTCTTGAAATACTTCAATGCCAAATTCTTTGGGAAGAACCAAAATGGAGGGTTTAGATTCTACTTGAGGAACGTCCAAGAGGTGGATGATCCAACGTCGTTTATAGACCAAGTAAAGAACTTACTTGATGATGCCATTGCTGAGCTTCCATATTGGTGTGCAAATGGAGCTGAAGTTGGAGGAAGAGTGGTCGGTGGGAGTTGTAACTTTTTTTTGTCGAAGTTTGATCAACTTTGA

Protein sequence

MPPPPSQVKFEKVTKDDSSLETVSHPLASTLARQGRRLTKSSQWASSMSHGYLTTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQVKNLLDDAIAELPYWCANGAEVGGRVVGGSCNFFLSKFDQL
BLAST of Carg19085 vs. NCBI nr
Match: XP_008455404.1 (PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 9.4e-28
Identity = 73/140 (52.14%), Postives = 80/140 (57.14%), Query Frame = 0

Query: 53  LTTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFID 112
           +T  ++IQ R  YKK + IWYD  LLKY NAKFFGKNQNGGFRFYL NV+E DDPTSF +
Sbjct: 100 ITAAQDIQQRCPYKKGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLVNVREADDPTSFKE 159

Query: 113 QVKNL----------------------------------------------LDDAIAELP 147
           QVKNL                                              LDDAIAELP
Sbjct: 160 QVKNLLNGLSEMAKTSRNLYAIGDLEIGSSKKLYGLVQCTRDLWTADCKKCLDDAIAELP 219

BLAST of Carg19085 vs. NCBI nr
Match: XP_023554592.1 (cysteine-rich repeat secretory protein 38-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 72/139 (51.80%), Postives = 80/139 (57.55%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T  ++IQ R  YK+ + IWYD  LLKY NAKFFGKNQNGGFRFYLRNV++ DDPTSF +Q
Sbjct: 101 TAGQDIQQRCPYKRGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLRNVRDADDPTSFGEQ 160

Query: 114 VKNL----------------------------------------------LDDAIAELPY 147
           VKNL                                              LDDAIAELPY
Sbjct: 161 VKNLLSGLSEKVKTSRNLYAIGELEIGGSKKVYGLVQCTRDLWTADCKKCLDDAIAELPY 220

BLAST of Carg19085 vs. NCBI nr
Match: XP_022952132.1 (cysteine-rich repeat secretory protein 38-like [Cucurbita moschata])

HSP 1 Score: 131.3 bits (329), Expect = 2.7e-27
Identity = 72/139 (51.80%), Postives = 80/139 (57.55%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T  ++IQ R  YKK + IWYD  LLKY NAKFFGKNQNGGFRFYLRNV++ +DPTSF +Q
Sbjct: 101 TAGQDIQQRCPYKKGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLRNVRDAEDPTSFGEQ 160

Query: 114 VKNL----------------------------------------------LDDAIAELPY 147
           VKNL                                              LDDAIAELPY
Sbjct: 161 VKNLLSGLSEKVKTSRNLFAIGELEIGSSKKVYGLVQCTRDLWTADCKKCLDDAIAELPY 220

BLAST of Carg19085 vs. NCBI nr
Match: XP_022969233.1 (cysteine-rich repeat secretory protein 38-like [Cucurbita maxima])

HSP 1 Score: 131.3 bits (329), Expect = 2.7e-27
Identity = 72/139 (51.80%), Postives = 80/139 (57.55%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T  ++IQ R  YKK + IWYD  LLKY NAKFFGKNQNGGFRFYLRNV++ +DPTSF +Q
Sbjct: 101 TAGQDIQQRCPYKKGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLRNVRDAEDPTSFGEQ 160

Query: 114 VKNL----------------------------------------------LDDAIAELPY 147
           VKNL                                              LDDAIAELPY
Sbjct: 161 VKNLLSGLSEKVKTSRNLYAIGELEIGSSKKVYGLVQCTRDLWSADCKKCLDDAIAELPY 220

BLAST of Carg19085 vs. NCBI nr
Match: XP_004144580.2 (PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis sativus] >KGN43546.1 hypothetical protein Csa_7G044860 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 6.1e-27
Identity = 72/136 (52.94%), Postives = 78/136 (57.35%), Query Frame = 0

Query: 57  KEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQVKN 116
           ++IQ R  YKK + IWYD  LLKY NAKFFGKNQNGGFRFYL NV+E DDPTSF +QVKN
Sbjct: 105 QDIQQRCPYKKGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLVNVREADDPTSFKEQVKN 164

Query: 117 L----------------------------------------------LDDAIAELPYWCA 147
           L                                              LDDAIAELPY CA
Sbjct: 165 LLNGLSETAKTSRNLYAIGDLEIGSSRKLYGLVQCTRDLWTADCKKCLDDAIAELPYCCA 224

BLAST of Carg19085 vs. TAIR10
Match: AT3G22060.1 (Receptor-like protein kinase-related family protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.3e-09
Identity = 46/140 (32.86%), Postives = 56/140 (40.00%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T   E++ R    K   +WYD  L+KY +  FFGK      RFYL NV+ V DP++F  Q
Sbjct: 105 TAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFEN-RFYLYNVKNVSDPSTFNSQ 164

Query: 114 VKNLLDD-----------------------------------------------AIAELP 147
            K LL +                                                I ELP
Sbjct: 165 TKALLTELTKKATTRDNQKLFATGEKNIGKNKLYGLVQCTRDLKSITCKACLNGIIGELP 224

BLAST of Carg19085 vs. TAIR10
Match: AT3G58310.1 (Domain of unknown function (DUF26))

HSP 1 Score: 41.6 bits (96), Expect = 5.2e-04
Identity = 38/141 (26.95%), Postives = 51/141 (36.17%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T   E++ R    K   +W+D  LLK     FF K  +   +FY+ + ++V DP  F  +
Sbjct: 109 TATSELRRRCPMNKAGIVWFDKCLLKISPTAFFEKIDDKN-KFYMYSTKKVSDPALFNVK 168

Query: 114 VKNL------------------------------------------------LDDAIAEL 147
            K L                                                LD  I EL
Sbjct: 169 TKALLTELTAKATRRSDKLLLYETGEMKLGKMKLYGMVQCRRDLWFTVCKTCLDKIIGEL 228

BLAST of Carg19085 vs. Swiss-Prot
Match: sp|Q9LRJ9|CRR38_ARATH (Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana OX=3702 GN=CRRSP38 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.6e-08
Identity = 46/140 (32.86%), Postives = 56/140 (40.00%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T   E++ R    K   +WYD  L+KY +  FFGK      RFYL NV+ V DP++F  Q
Sbjct: 105 TAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFEN-RFYLYNVKNVSDPSTFNSQ 164

Query: 114 VKNLLDD-----------------------------------------------AIAELP 147
            K LL +                                                I ELP
Sbjct: 165 TKALLTELTKKATTRDNQKLFATGEKNIGKNKLYGLVQCTRDLKSITCKACLNGIIGELP 224

BLAST of Carg19085 vs. TrEMBL
Match: tr|A0A1S3C1J7|A0A1S3C1J7_CUCME (cysteine-rich repeat secretory protein 38-like OS=Cucumis melo OX=3656 GN=LOC103495573 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-28
Identity = 73/140 (52.14%), Postives = 80/140 (57.14%), Query Frame = 0

Query: 53  LTTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFID 112
           +T  ++IQ R  YKK + IWYD  LLKY NAKFFGKNQNGGFRFYL NV+E DDPTSF +
Sbjct: 100 ITAAQDIQQRCPYKKGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLVNVREADDPTSFKE 159

Query: 113 QVKNL----------------------------------------------LDDAIAELP 147
           QVKNL                                              LDDAIAELP
Sbjct: 160 QVKNLLNGLSEMAKTSRNLYAIGDLEIGSSKKLYGLVQCTRDLWTADCKKCLDDAIAELP 219

BLAST of Carg19085 vs. TrEMBL
Match: tr|A0A0A0K6W4|A0A0A0K6W4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044860 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.0e-27
Identity = 72/136 (52.94%), Postives = 78/136 (57.35%), Query Frame = 0

Query: 57  KEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQVKN 116
           ++IQ R  YKK + IWYD  LLKY NAKFFGKNQNGGFRFYL NV+E DDPTSF +QVKN
Sbjct: 105 QDIQQRCPYKKGAAIWYDSCLLKYSNAKFFGKNQNGGFRFYLVNVREADDPTSFKEQVKN 164

Query: 117 L----------------------------------------------LDDAIAELPYWCA 147
           L                                              LDDAIAELPY CA
Sbjct: 165 LLNGLSETAKTSRNLYAIGDLEIGSSRKLYGLVQCTRDLWTADCKKCLDDAIAELPYCCA 224

BLAST of Carg19085 vs. TrEMBL
Match: tr|A0A1S3C1A5|A0A1S3C1A5_CUCME (cysteine-rich repeat secretory protein 38-like OS=Cucumis melo OX=3656 GN=LOC103495695 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.9e-15
Identity = 57/139 (41.01%), Postives = 67/139 (48.20%), Query Frame = 0

Query: 54  TTRKEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQ 113
           T   EIQ R   KK  +IWYD  LLKY N KFFGK  N GFR Y+ NVQE ++PT F +Q
Sbjct: 130 TASNEIQQRCPDKKGGSIWYDFCLLKYSNIKFFGKIDN-GFRLYMWNVQEAENPTLFNEQ 189

Query: 114 VKNL----------------------------------------------LDDAIAELPY 147
           VKNL                                              L+DA+AELP 
Sbjct: 190 VKNLLTSLVEQVEVTPKLYVIGEKEIEGSKKLYGLVQCTRDLSTAACKKCLNDAVAELPN 249

BLAST of Carg19085 vs. TrEMBL
Match: tr|A0A0A0K273|A0A0A0K273_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044830 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.3e-13
Identity = 54/135 (40.00%), Postives = 64/135 (47.41%), Query Frame = 0

Query: 58  EIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQVKNL 117
           EIQ +   KK  +IWYD   LKY N KFFGK  N GFR Y+ NVQE ++PT F +QVKNL
Sbjct: 110 EIQQQCLNKKGGSIWYDFCFLKYSNIKFFGKIDN-GFRLYMWNVQEAENPTVFNEQVKNL 169

Query: 118 ----------------------------------------------LDDAIAELPYWCAN 147
                                                         L DA+AELP  C  
Sbjct: 170 LTSLVEQVEVTPKLYVIGEKENEGSKKLYGLVQCTRDLSTAACKKCLTDAVAELPRCC-- 229

BLAST of Carg19085 vs. TrEMBL
Match: tr|M5WY54|M5WY54_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016345mg PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 52/136 (38.24%), Postives = 61/136 (44.85%), Query Frame = 0

Query: 57  KEIQHRFGYKKDSNIWYDCGLLKYFNAKFFGKNQNGGFRFYLRNVQEVDDPTSFIDQVKN 116
           K++  R   +K + IWYD  L KY N  F GK  N   RFY+ NVQEVDDPT F ++VK 
Sbjct: 68  KKLGERCPSRKGAIIWYDNCLFKYSNVNFAGKIDNNN-RFYMWNVQEVDDPTPFNEKVKE 127

Query: 117 L----------------------------------------------LDDAIAELPYWCA 147
           L                                              LDDAI+ELP  C 
Sbjct: 128 LLSGLSTKASSNPKFYATGELELSSSETLYGLTQCTRDLSSSDCKKCLDDAISELPNCC- 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008455404.19.4e-2852.14PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis melo][more]
XP_023554592.12.1e-2751.80cysteine-rich repeat secretory protein 38-like [Cucurbita pepo subsp. pepo][more]
XP_022952132.12.7e-2751.80cysteine-rich repeat secretory protein 38-like [Cucurbita moschata][more]
XP_022969233.12.7e-2751.80cysteine-rich repeat secretory protein 38-like [Cucurbita maxima][more]
XP_004144580.26.1e-2752.94PREDICTED: cysteine-rich repeat secretory protein 38-like [Cucumis sativus] >KGN... [more]
Match NameE-valueIdentityDescription
AT3G22060.15.3e-0932.86Receptor-like protein kinase-related family protein[more]
AT3G58310.15.2e-0426.95Domain of unknown function (DUF26)[more]
Match NameE-valueIdentityDescription
sp|Q9LRJ9|CRR38_ARATH9.6e-0832.86Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana OX=3702 GN=CRR... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3C1J7|A0A1S3C1J7_CUCME6.2e-2852.14cysteine-rich repeat secretory protein 38-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0K6W4|A0A0A0K6W4_CUCSA4.0e-2752.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044860 PE=4 SV=1[more]
tr|A0A1S3C1A5|A0A1S3C1A5_CUCME7.9e-1541.01cysteine-rich repeat secretory protein 38-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0K273|A0A0A0K273_CUCSA4.3e-1340.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044830 PE=4 SV=1[more]
tr|M5WY54|M5WY54_PRUPE1.2e-1038.24Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016345mg PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19085-RACarg19085-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32411FAMILY NOT NAMEDcoord: 54..119