Carg18632 (gene) Silver-seed gourd

Overview
NameCarg18632
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionpentatricopeptide repeat-containing protein At2g15690-like
LocationCucurbita_argyrosperma_scaffold_147 : 278909 .. 282930 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCGATTCCTTCTCAGACCACTCCGAACTCCATTATCACTACCAATTTCACATCGCGAATCATCCCATATCACTCTCCCGCGGTCAAATCCTTCCGACCCACGCTCTTCTGCCCTAATGCTCTCTCCAATTCCAGCAACCGGAAGCCGGCTCGCCGGTACGATGGCCAAACCACGACGAACACTCTCTCCAAATCTCAGAACCGGACGAGCGATTCAGTTCTTAGTCTTCCGTCGACGGTGGATTTAGTGGCTCTATGCGAGGCGGGCGAGGTAATGGACGTTCTGGAATTTATTGGCCAAGGTGCTAATCTTGATTATGGAATTTGTACAGCTTTGTTGAATTCTTGTTGCAATTTTAAGTTGCTTGAGGCTGGGAGAAGGGTGGATAGGCTGTTGAAAGGGACGAAATTTAGTGGGGATGTGGGATTGAACAATAAATTGATTGAAATGTACTCTTGTTGTGGCTGTATGAAAGATGCGCGTAGGGTGTTTGATAAAATGCCTGACAGGGATATTAGGACGTGGAATTTGATGATCAAGGGGTATGGAGAGAATGGGGAAGGAGATGGTGGGTTGGCCTTGTTTGAGCGAATGAAGAGTGTGGGATTGCAGCCAAATTCTGAAACATTTCTAGTGGTGTTAGCAGCTTGTGCCATGGCTGAAGCTGTGGAGGAAGGTTTATTTTACTTTAACTCTATGGAAAATGAATATGGAATCATTCCTGAAATCGAACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGCCATTTGATTGAAGCAGAAGAGTTCATTAAGAAAATTCCCATCAACCCCACAGCCAAAATCTGGGATGCCCTTAGAATCTACGCTCGACTCCATGGAAACATCGAGCTTGAAGATCGAGCCGAAGAGCTGATATTCTCTTATGACCCGTCCATGGCGCCCACGGTTGCCAAGCCACCGCTCCCTCCCCCAAGGAAGCAATCGGCCACCAACATGTTGGAGGAGAAGGACAGAGTGAGGGAGTTCAGATGTGCAATGCCTTACAAAGAAGAGGGGGAAGGGGGGAAGCTAAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTGCCAGATACAAGATATGTGCTTCATGACATTGATGAGGAGGCTAAACAGCAAGCTTTGCAGTACCATAGCGAGCGGTTGGCCATTGCTTACGGATTGATCAGTACGCCTGCGAGAACGACGCTGAGAATCATCAAGAATCTTCGGATCTGCGGCGATTGTCACAATGCAATCAAGATCATGTCAAAGATTGTTGGAAGAGAGTTGATTGTTAGAGATAATAAGCGGTTTCATCACTTCAAAGACGGCAAATGCTCTTGTGGGGATTACTGGTAAATACATCACCTGTATATACACAATCATATTTTGGCTTCCTTGGTAATATTATGACTTTGTTTTTTGTTTTCTTGAAAAGTCTCGTACCAATTCATACTAATGGTAGCGGATGTCGGACTCCTCTTCTAACAATTCCCAATAATTTTATGATAGAAAGCGAAGCCATTCCGTCGAAAAGGTCGAGAGTAGATTGAAAGATGAATATTCATAGTAAACATTAGATTTTGAGGATTCGGGTTCTAATGCAAATCTAAAAATTTTGAATCAAGTTTTAGTTTTTAAAAACTATTGAGTTTTGTATGGAAGGTAATATAATAAAGGTTTTATGGGTAGAAAATGAGAAAATTTAAGAAGAAGGGGTTGGACATGAGAATAATTAAATAATAAAAGTTTTATTAGTCGAAATTATGCAAATAAATATTTAATATTTAATTAGAAATGACAGCACATCCTTAAAATTAAATTTCCTAAAATACCCTTTGGATTAAAAATTTTGTGGGCCGAGGTGAAAAGAAGCAGGCCCAGGGTTGGGTGGAAGAAGTCCTCGCTCCGTAGTCCGTCGTTCCATTGAAATTCTCAAGATCCCAATGCCTCATTCTCTCTTCTTCACGGTGTCGGAGCTCCACTTTCTCCCACTAGCGGCGACAGAAAGGAGGTCAGTTCCTCAATCTCCTCCTCCCTCATCGTCTCTTTTGCTATTTCTTGAAGCTGAACGCCTTTCACATTCTCTTCTATTTCCTCAATCTCCTCCCCCTCTGATTTGATCCTTGGTTTTGCCTTTTCCTGTATCCTGTGTTTTTCTCTTTCTTTTATATGATCTTTTCATCTTCTCTGTCGTATAAATACTGCGCCTTATTTGTATAATAGTGGAAATCTCTTCTTCTTTTTTTTTCTATGTCTTTGGATTGTTGTTTCGGATATTCGATATTGGAATTTGATTAGGGTTTTAGCCGTTTGTTATTTTGAAAATTTACTACACTAAAACTTTCTATTTCCTAAGTAAGGAGGGAAAATGTCTGTGATTTAGGGTGCTATTTATGGCGGAATGGTTTCTCTGGATCTTATTTTCCGACTCATGTGACGGTAGTAAATTTCGAGTTACTCCATTTTGCCTGCTCCACGTTGATTTTTGTGCTTAACGAAGAAACATATTTTGTCACACGGCAGTGGTTTTCTAGATCTCTTTTCACTTCTGATTTTGTCTGAGAAGCCATTTTTTTGGGTATTTATTCATTGTTAGGAACGTCAGGAAAATCGATGTTTTGTAGAGGTTGATAAATATGTTCTTGTTTTCGACATGTCTTTAATTTAATTTTTTATCTCTTGGCTGCAGTTTTCTAGCTTTCTTTTGGATTTAATGGCGTCCAAGTTGCATCAGTTGCAATCCAAGGCTTGTAAAGCTTCTCAATATGCTATCAAGCACGGGTCCTCCTATTATAAGCAGTTGTTGGAGCAGAACAAGCAATACATCCAAGAACCAGCTACTGTGGAGAAATGCAGCTTGCTTTCAGAGCAGTTGTTTTATACTCGTCTTGCTAGGTAATTACCTTCAATACTCATGCTATTCTTGCACCTTTTCCTTGGTTGTTGAAGAATTCCTACCGTTTTCATGTTCATGTGTTCTTGGGATTATACCTATTAGCTTAGTTTTAGTATCTTACGCTGGCATTCAACTGATACAATTGTGTTTTAGAAACTCGTCTGTTTCTATATTGATTTTAACTTTGCTTCTAAGCATCGCACCACTTGTTGAACTGCGCAGCCACTCGTGAGAATTATAGTTCATGGACCTGTTTCCATTCATGGAACGGTATACATATTTGTTATACGTGGGAATGAATCCCCTCTCACCTGTAGCACTGTGCTTAGTATGATAGCATTTTTTTATTCCTAAAATGGGAGCATGAAAGTATCTACTATCCATCCGTGCATGAATTCTGTATTATCCCCCACTCGATGTTCATATCCTAAAATACTTGTCCTAAGCTTCACCTCATTGCTTTACTCACTGATTTTGCACATTACGTTTATAATGCAGCATCCCAGGCCGATATGAATCATTCTGGAAAGAACTTGATTGTGTTAAAAACTTGTGGAAGAACCGGCAGGAGCTGAAAGTTGAAGATGCTGGCATCGCGGCCTTGTTCGGGCTTGAGTGTTTTGCATGGTTTTGTGCTGGCGAGATCGTTGGAAGGGGCTTTACATTCACAGGTTATTATGTCTGAGGACATTCATAGTCATTTGTGGAAGGGATGTCGACAATGGCGAATTCCCTTCTCTTTTCTGCGGGTACTTCGCATATAGTTTTTTTCTTTTTCTTTTTAATTAAGTTGAGAATTCTGCGAGCAACTCTGATAGATTAATAATAGCCCATGAATTCCGAGGGGGACTATAAAGGATTCTTGCGTTGTTCAAATTGATGCATGTTCTTGATAAATCCAGTTACTAACTATGAACTGGAAATCTGATTTGGTGAAACCTCCATACAAGATGTGGCTTTTGCTGCAACTTCCCTACATTTTTCTTGGAGCTTTTTCCCAGATGATGTGCCAGGTTGTACGTAGAACTAGAGGTATGTCATTGTGCAATCTTTGTATTTGGGTGTTCCATTCGAAATCTTCAATATCAAGTTCATCTCTCCC

mRNA sequence

ATGGCTTCCTCGATTCCTTCTCAGACCACTCCGAACTCCATTATCACTACCAATTTCACATCGCGAATCATCCCATATCACTCTCCCGCGGTCAAATCCTTCCGACCCACGCTCTTCTGCCCTAATGCTCTCTCCAATTCCAGCAACCGGAAGCCGGCTCGCCGGTACGATGGCCAAACCACGACGAACACTCTCTCCAAATCTCAGAACCGGACGAGCGATTCAGTTCTTAGTCTTCCGTCGACGGTGGATTTAGTGGCTCTATGCGAGGCGGGCGAGGTAATGGACGTTCTGGAATTTATTGGCCAAGGTGCTAATCTTGATTATGGAATTTGTACAGCTTTGTTGAATTCTTGTTGCAATTTTAAGTTGCTTGAGGCTGGGAGAAGGGTGGATAGGCTGTTGAAAGGGACGAAATTTAGTGGGGATGTGGGATTGAACAATAAATTGATTGAAATGTACTCTTGTTGTGGCTGTATGAAAGATGCGCGTAGGGTGTTTGATAAAATGCCTGACAGGGATATTAGGACGTGGAATTTGATGATCAAGGGGTATGGAGAGAATGGGGAAGGAGATGGTGGGTTGGCCTTGTTTGAGCGAATGAAGAGTGTGGGATTGCAGCCAAATTCTGAAACATTTCTAGTGGTGTTAGCAGCTTGTGCCATGGCTGAAGCTGTGGAGGAAGGTTTATTTTACTTTAACTCTATGGAAAATGAATATGGAATCATTCCTGAAATCGAACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGCCATTTGATTGAAGCAGAAGAGTTCATTAAGAAAATTCCCATCAACCCCACAGCCAAAATCTGGGATGCCCTTAGAATCTACGCTCGACTCCATGGAAACATCGAGCTTGAAGATCGAGCCGAAGAGCTGATATTCTCTTATGACCCGTCCATGGCGCCCACGGTTGCCAAGCCACCGCTCCCTCCCCCAAGGAAGCAATCGGCCACCAACATGTTGGAGGAGAAGGACAGAGTGAGGGAGTTCAGATGTGCAATGCCTTACAAAGAAGAGGGGGAAGGGGGGAAGCTAAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTGCCAGATACAAGATATGTGCTTCATGACATTGATGAGGAGGCTAAACAGCAAGCTTTGCAGTACCATAGCGAGCGGTTGGCCATTGCTTACGGATTGATCAGTACGCCTGCGAGAACGACGCTGAGAATCATCAAGAATCTTCGGATCTGCGGCGATTGTCACAATGCAATCAAGATCATGTCAAAGATTGTTGGAAGAGAGTTGATTGTTAGAGATAATAAGCGGTTTCATCACTTCAAAGACGGCAAATGCTCTTATCCCAATGCCTCATTCTCTCTTCTTCACGGTGTCGGAGCTCCACTTTCTCCCACTAGCGGCGACAGAAAGGAGTTTTCTAGCTTTCTTTTGGATTTAATGGCGTCCAAGTTGCATCAGTTGCAATCCAAGGCTTGTAAAGCTTCTCAATATGCTATCAAGCACGGGTCCTCCTATTATAAGCAGTTGTTGGAGCAGAACAAGCAATACATCCAAGAACCAGCTACTGTGGAGAAATGCAGCTTGCTTTCAGAGCAGTTGTTTTATACTCGTCTTGCTAGCATCCCAGGCCGATATGAATCATTCTGGAAAGAACTTGATTGTGTTAAAAACTTGTGGAAGAACCGGCAGGAGCTGAAAGTTGAAGATGCTGGCATCGCGGCCTTGTTCGGGCTTGAGTGTTTTGCATGGTTTTGTGCTGGCGAGATCGTTGGAAGGGGCTTTACATTCACAGGTTATTATGTCTGAGGACATTCATAGTCATTTGTGGAAGGGATGTCGACAATGGCGAATTCCCTTCTCTTTTCTGCGGGTACTTCGCATATAGTTTTTTTCTTTTTCTTTTTAATTAAGTTGAGAATTCTGCGAGCAACTCTGATAGATTAATAATAGCCCATGAATTCCGAGGGGGACTATAAAGGATTCTTGCGTTGTTCAAATTGATGCATGTTCTTGATAAATCCAGTTACTAACTATGAACTGGAAATCTGATTTGGTGAAACCTCCATACAAGATGTGGCTTTTGCTGCAACTTCCCTACATTTTTCTTGGAGCTTTTTCCCAGATGATGTGCCAGGTTGTACGTAGAACTAGAGGTATGTCATTGTGCAATCTTTGTATTTGGGTGTTCCATTCGAAATCTTCAATATCAAGTTCATCTCTCCC

Coding sequence (CDS)

ATGGCTTCCTCGATTCCTTCTCAGACCACTCCGAACTCCATTATCACTACCAATTTCACATCGCGAATCATCCCATATCACTCTCCCGCGGTCAAATCCTTCCGACCCACGCTCTTCTGCCCTAATGCTCTCTCCAATTCCAGCAACCGGAAGCCGGCTCGCCGGTACGATGGCCAAACCACGACGAACACTCTCTCCAAATCTCAGAACCGGACGAGCGATTCAGTTCTTAGTCTTCCGTCGACGGTGGATTTAGTGGCTCTATGCGAGGCGGGCGAGGTAATGGACGTTCTGGAATTTATTGGCCAAGGTGCTAATCTTGATTATGGAATTTGTACAGCTTTGTTGAATTCTTGTTGCAATTTTAAGTTGCTTGAGGCTGGGAGAAGGGTGGATAGGCTGTTGAAAGGGACGAAATTTAGTGGGGATGTGGGATTGAACAATAAATTGATTGAAATGTACTCTTGTTGTGGCTGTATGAAAGATGCGCGTAGGGTGTTTGATAAAATGCCTGACAGGGATATTAGGACGTGGAATTTGATGATCAAGGGGTATGGAGAGAATGGGGAAGGAGATGGTGGGTTGGCCTTGTTTGAGCGAATGAAGAGTGTGGGATTGCAGCCAAATTCTGAAACATTTCTAGTGGTGTTAGCAGCTTGTGCCATGGCTGAAGCTGTGGAGGAAGGTTTATTTTACTTTAACTCTATGGAAAATGAATATGGAATCATTCCTGAAATCGAACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGCCATTTGATTGAAGCAGAAGAGTTCATTAAGAAAATTCCCATCAACCCCACAGCCAAAATCTGGGATGCCCTTAGAATCTACGCTCGACTCCATGGAAACATCGAGCTTGAAGATCGAGCCGAAGAGCTGATATTCTCTTATGACCCGTCCATGGCGCCCACGGTTGCCAAGCCACCGCTCCCTCCCCCAAGGAAGCAATCGGCCACCAACATGTTGGAGGAGAAGGACAGAGTGAGGGAGTTCAGATGTGCAATGCCTTACAAAGAAGAGGGGGAAGGGGGGAAGCTAAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTGCCAGATACAAGATATGTGCTTCATGACATTGATGAGGAGGCTAAACAGCAAGCTTTGCAGTACCATAGCGAGCGGTTGGCCATTGCTTACGGATTGATCAGTACGCCTGCGAGAACGACGCTGAGAATCATCAAGAATCTTCGGATCTGCGGCGATTGTCACAATGCAATCAAGATCATGTCAAAGATTGTTGGAAGAGAGTTGATTGTTAGAGATAATAAGCGGTTTCATCACTTCAAAGACGGCAAATGCTCTTATCCCAATGCCTCATTCTCTCTTCTTCACGGTGTCGGAGCTCCACTTTCTCCCACTAGCGGCGACAGAAAGGAGTTTTCTAGCTTTCTTTTGGATTTAATGGCGTCCAAGTTGCATCAGTTGCAATCCAAGGCTTGTAAAGCTTCTCAATATGCTATCAAGCACGGGTCCTCCTATTATAAGCAGTTGTTGGAGCAGAACAAGCAATACATCCAAGAACCAGCTACTGTGGAGAAATGCAGCTTGCTTTCAGAGCAGTTGTTTTATACTCGTCTTGCTAGCATCCCAGGCCGATATGAATCATTCTGGAAAGAACTTGATTGTGTTAAAAACTTGTGGAAGAACCGGCAGGAGCTGAAAGTTGAAGATGCTGGCATCGCGGCCTTGTTCGGGCTTGAGTGTTTTGCATGGTTTTGTGCTGGCGAGATCGTTGGAAGGGGCTTTACATTCACAGGTTATTATGTCTGA

Protein sequence

MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQTTTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSYPNASFSLLHGVGAPLSPTSGDRKEFSSFLLDLMASKLHQLQSKACKASQYAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLASIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV
Homology
[Close]
BLAST of Carg18632 vs. NCBI nr
Match: XP_022938077.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022938078.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 905.6 bits (2339), Expect = 9.2e-260
Identity = 449/454 (98.90%), Postives = 451/454 (99.34%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           MASSIPSQTTPNSIITTNFTSRIIP+HSPAVKSFRPTLFCPN+LSNSSNRKPARRYDGQT
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
           TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           NFKLLEAGRRVDRLLKGTKFSGDVGLNN LIEMYSCCGCMKDARRVFDKMPDRDIRTWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EELIFSYDPSMAPT AKPPL PPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 454

[Close]
BLAST of Carg18632 vs. NCBI nr
Match: XP_022938076.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 905.6 bits (2339), Expect = 9.2e-260
Identity = 449/454 (98.90%), Postives = 451/454 (99.34%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           MASSIPSQTTPNSIITTNFTSRIIP+HSPAVKSFRPTLFCPN+LSNSSNRKPARRYDGQT
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
           TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           NFKLLEAGRRVDRLLKGTKFSGDVGLNN LIEMYSCCGCMKDARRVFDKMPDRDIRTWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EELIFSYDPSMAPT AKPPL PPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 454

[Close]
BLAST of Carg18632 vs. NCBI nr
Match: XP_023538219.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 898.7 bits (2321), Expect = 1.1e-257
Identity = 446/454 (98.24%), Postives = 449/454 (98.90%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           MASSIPSQT PNSIITTNFTSRIIP+HSPAVKSFRP LFCPNALSNSSNRKPARRYDGQT
Sbjct: 1   MASSIPSQTAPNSIITTNFTSRIIPFHSPAVKSFRPKLFCPNALSNSSNRKPARRYDGQT 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
           TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGA+LDYGI TALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGAHLDYGIFTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYGENGEGDGGLALFERMK+VGLQPNSETFL VLAACAMAEAVEEGLFYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKNVGLQPNSETFLAVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN
Sbjct: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKD KCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDSKCS 454

[Close]
BLAST of Carg18632 vs. NCBI nr
Match: XP_022966045.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 877.9 bits (2267), Expect = 2.0e-251
Identity = 437/454 (96.26%), Postives = 443/454 (97.58%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           MASSIPSQTTPNSIITTNFTSRIIP+HSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
           TTNTLSKSQNRTSDSVLS PSTV LVALCEAGEVMDVLEFIG GANLDYGI TALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVLSPPSTVHLVALCEAGEVMDVLEFIGHGANLDYGIFTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYGENGEGDGGLALFERMK+VGLQPNSETFL VLAACAMAEAVEEGLFYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKNVGLQPNSETFLAVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GIIPEIEHYL VVDVLGKSGHLIEAEEFIKK+PI+PTAKIWDALRIYARLHGNIELEDRA
Sbjct: 241 GIIPEIEHYLRVVDVLGKSGHLIEAEEFIKKMPISPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EELIFSYDPSMAPT AKPPLPP RKQS TNMLEEKDRVR+FRC+MP KEEGE GKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLPPLRKQSVTNMLEEKDRVRDFRCSMPSKEEGERGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 454

[Close]
BLAST of Carg18632 vs. NCBI nr
Match: XP_008459269.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis melo])

HSP 1 Score: 761.9 bits (1966), Expect = 1.6e-216
Identity = 383/454 (84.36%), Postives = 409/454 (90.09%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           M+SSI S  T NSI TTNF S IIP H PAVKSFR T    NALSNS  RK AR+YD Q+
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
           TTNTLS+SQN+TSDSV S PSTVDL+ALCE G+V+D LE+IGQGA +DYG+ TALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           N KLLEAGRRVD LLKGTKF GDV LNNKLIEMYS CGCMK+AR+VFDKMP++D RTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYGENGEGD GLALFE+MK+VGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFI+K+PINPTAKIWDALR YARLHGN+ELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EEL+FS DPS   T  KP LPP RKQS+TNMLEEKDRVREFR AMPYKEEGE GKLKGLN
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGE-GKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 453

[Close]
BLAST of Carg18632 vs. TAIR10
Match: AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 339.7 bits (870), Expect = 3.6e-93
Identity = 180/375 (48.00%), Postives = 223/375 (59.47%), Query Frame = 0 

Query: 80  PSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCCNFKLLEAGRRVDRLLKGTK 139
           PS  +++ LC+     D +E + +GA  D      L  SC N K LE  ++V      +K
Sbjct: 207 PSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSK 266

Query: 140 FSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFE 199
           F GD  LNN +I M+  C  + DA+RVFD M D+D+ +W+LM+  Y +NG GD  L LFE
Sbjct: 267 FRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFE 326

Query: 200 RMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKS 259
            M   GL+PN ETFL V  ACA                                      
Sbjct: 327 EMTKHGLKPNEETFLTVFLACATVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 386

Query: 260 GHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPP 319
               EAE++I+ +P  PTA  W+A+R YARLHG+I+LED  EEL+   DPS A  + K P
Sbjct: 387 XXXXEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA-VINKIP 446

Query: 320 LPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLNGQMREAGYVPDTRYVLHDI 379
            PPP+    TNM+  K R+ EFR    YK+E +    K      +   YVPDTR+VLHDI
Sbjct: 447 TPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK------KGVVYVPDTRFVLHDI 506

Query: 380 DEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIV 439
           D+EAK+QAL YHSERLAIAYG+I TP R TL IIKNLR+CGDCHN IKIMSKI+GR LIV
Sbjct: 507 DQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIV 566

Query: 440 RDNKRFHHFKDGKCS 455
           RDNKRFHHFKDGKCS
Sbjct: 567 RDNKRFHHFKDGKCS 574

[Close]
BLAST of Carg18632 vs. TAIR10
Match: AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 261.9 bits (668), Expect = 9.6e-70
Identity = 141/386 (36.53%), Postives = 220/386 (56.99%), Query Frame = 0 

Query: 84  DLVALCEAGEVMDVLEFIGQGANLDYGICTALL----NSCCNFKLLEAGRRVDRLLKGTK 143
           +L ++C  G+V   +E I    N  Y +    L      C + + L+  + V   +  + 
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211

Query: 144 FSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFE 203
              D+   N +IEMYS CG ++DA  VF+ MP+R++ TW  +I+ + +NG+G+  +  F 
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271

Query: 204 RMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKS 263
           R K  G +P+ E F  +  AC +   + EGL +F SM  EYGIIP +EHY+ +V +L + 
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331

Query: 264 GHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPP 323
           G+L EA  F++   + P   +W+ L   +R+HG++ L DR ++++   D S     +K  
Sbjct: 332 GYLDEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAG 391

Query: 324 LPPPRKQSATNMLEEK--DRVREFRCAMPYKEEGEGGK---------LKGLNGQMREAGY 383
           L P +   ++++++EK     +     + Y   G+  +         LK L   M E GY
Sbjct: 392 LVPVK---SSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGY 451

Query: 384 VPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKI 443
           VP ++  LHD+D+E+K + L  H+ER A     + TPAR+ +R++KNLR+C DCHNA+K+
Sbjct: 452 VPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKL 511

Query: 444 MSKIVGRELIVRDNKRFHHFKDGKCS 455
           MSKIVGRELI RD KRFHH KDG CS
Sbjct: 512 MSKIVGRELISRDAKRFHHMKDGVCS 532

[Close]
BLAST of Carg18632 vs. TAIR10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-69
Identity = 139/375 (37.07%), Postives = 219/375 (58.40%), Query Frame = 0 

Query: 103 QGANLDYGICTALLNSCCNFKLLEAGRRV-DRLLKGTKFSGDVGLNNKLIEMYSCCGCMK 162
           +G  L+    ++ L++C +   LE G+++  RL+KG   +G   + N L+ MY  CG ++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIE 462

Query: 163 DARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACA 222
           +A  +F +M  +DI +WN MI GY  +G G+  L  FE MK  GL+P+  T + VL+AC+
Sbjct: 463 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 522

Query: 223 MAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIW 282
               V++G  YF +M  +YG++P  +HY  +VD+LG++G L +A   +K +P  P A IW
Sbjct: 523 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 582

Query: 283 DALRIYARLHGNIELEDRAEELIFSYDP--------------------SMAPTVAKPPLP 342
             L   +R+HGN EL + A + IF+ +P                     +     +    
Sbjct: 583 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 642

Query: 343 PPRKQSATNMLEEKDRVREFRCAMPYKEEGEG--GKLKGLNGQMREAGYVPDTRYVLHDI 402
             +K    + +E +++   F     +  E +     L+ L+ +M++AGYV  T  VLHD+
Sbjct: 643 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 702

Query: 403 DEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
           +EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+
Sbjct: 703 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 762

[Close]
BLAST of Carg18632 vs. TAIR10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1)

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-69
Identity = 144/369 (39.02%), Postives = 215/369 (58.27%), Query Frame = 0 

Query: 108 DYGICTALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVF 167
           DY   +++++ C N  LLE GR++  L   + F     + + L+ +YS CG  + A +VF
Sbjct: 217 DYSF-SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVE 227
           +++P +++  WN M+K Y ++      + LF+RMK  G++PN  TFL VL AC+ A  V+
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIY 287
           EG +YF+ M+ E  I P  +HY  +VD+LG++G L EA E I  +PI+PT  +W AL   
Sbjct: 337 EGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 ARLHGNIELEDRAEELIFSYDP-------SMAPTVAKPPL-------------PPPRKQS 347
             +H N EL   A + +F   P       S++   A                    +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 ATNMLEEKDRVREFRCAMPYKEEGEG--GKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F       E+ +    KL  L  +M +AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 455
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

[Close]
BLAST of Carg18632 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 261.2 bits (666), Expect = 1.6e-69
Identity = 145/366 (39.62%), Postives = 203/366 (55.46%), Query Frame = 0 

Query: 113 TALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPD 172
           T +L++C     L  G+ V  L++ T F   + ++  LI MY+ CG + +ARR+FD M  
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483

Query: 173 RDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFY 232
           ++  TWN MI GYG +G+G   L +F  M + G+ P   TFL VL AC+ A  V+EG   
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 233 FNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHG 292
           FNSM + YG  P ++HY  +VD+LG++GHL  A +FI+ + I P + +W+ L    R+H 
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603

Query: 293 NIELEDRAEELIFSYDPS------MAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMP 352
           +  L     E +F  DP       +   +       P  Q+AT     K R         
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP--QAATVRQTAKKRKLAKAPGYT 663

Query: 353 YKEEGEG------------------GKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQAL 412
             E GE                    KL+ L G+MREAGY P+T   LHD++EE ++  +
Sbjct: 664 LIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 723

Query: 413 QYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 455
           + HSERLAIA+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHF
Sbjct: 724 KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHF 783

[Close]
BLAST of Carg18632 vs. Swiss-Prot
Match: sp|Q9ZQE5|PP153_ARATH (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 339.7 bits (870), Expect = 6.6e-92
Identity = 180/375 (48.00%), Postives = 223/375 (59.47%), Query Frame = 0 

Query: 80  PSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCCNFKLLEAGRRVDRLLKGTK 139
           PS  +++ LC+     D +E + +GA  D      L  SC N K LE  ++V      +K
Sbjct: 207 PSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSK 266

Query: 140 FSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFE 199
           F GD  LNN +I M+  C  + DA+RVFD M D+D+ +W+LM+  Y +NG GD  L LFE
Sbjct: 267 FRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFE 326

Query: 200 RMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKS 259
            M   GL+PN ETFL V  ACA                                      
Sbjct: 327 EMTKHGLKPNEETFLTVFLACATVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 386

Query: 260 GHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPP 319
               EAE++I+ +P  PTA  W+A+R YARLHG+I+LED  EEL+   DPS A  + K P
Sbjct: 387 XXXXEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA-VINKIP 446

Query: 320 LPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLNGQMREAGYVPDTRYVLHDI 379
            PPP+    TNM+  K R+ EFR    YK+E +    K      +   YVPDTR+VLHDI
Sbjct: 447 TPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK------KGVVYVPDTRFVLHDI 506

Query: 380 DEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIV 439
           D+EAK+QAL YHSERLAIAYG+I TP R TL IIKNLR+CGDCHN IKIMSKI+GR LIV
Sbjct: 507 DQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIV 566

Query: 440 RDNKRFHHFKDGKCS 455
           RDNKRFHHFKDGKCS
Sbjct: 567 RDNKRFHHFKDGKCS 574

[Close]
BLAST of Carg18632 vs. Swiss-Prot
Match: sp|Q9SUU7|PP346_ARATH (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-68
Identity = 141/386 (36.53%), Postives = 220/386 (56.99%), Query Frame = 0 

Query: 84  DLVALCEAGEVMDVLEFIGQGANLDYGICTALL----NSCCNFKLLEAGRRVDRLLKGTK 143
           +L ++C  G+V   +E I    N  Y +    L      C + + L+  + V   +  + 
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211

Query: 144 FSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFE 203
              D+   N +IEMYS CG ++DA  VF+ MP+R++ TW  +I+ + +NG+G+  +  F 
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271

Query: 204 RMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKS 263
           R K  G +P+ E F  +  AC +   + EGL +F SM  EYGIIP +EHY+ +V +L + 
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331

Query: 264 GHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPP 323
           G+L EA  F++   + P   +W+ L   +R+HG++ L DR ++++   D S     +K  
Sbjct: 332 GYLDEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAG 391

Query: 324 LPPPRKQSATNMLEEK--DRVREFRCAMPYKEEGEGGK---------LKGLNGQMREAGY 383
           L P +   ++++++EK     +     + Y   G+  +         LK L   M E GY
Sbjct: 392 LVPVK---SSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGY 451

Query: 384 VPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKI 443
           VP ++  LHD+D+E+K + L  H+ER A     + TPAR+ +R++KNLR+C DCHNA+K+
Sbjct: 452 VPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKL 511

Query: 444 MSKIVGRELIVRDNKRFHHFKDGKCS 455
           MSKIVGRELI RD KRFHH KDG CS
Sbjct: 512 MSKIVGRELISRDAKRFHHMKDGVCS 532

[Close]
BLAST of Carg18632 vs. Swiss-Prot
Match: sp|Q9SY02|PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-68
Identity = 139/375 (37.07%), Postives = 219/375 (58.40%), Query Frame = 0 

Query: 103 QGANLDYGICTALLNSCCNFKLLEAGRRV-DRLLKGTKFSGDVGLNNKLIEMYSCCGCMK 162
           +G  L+    ++ L++C +   LE G+++  RL+KG   +G   + N L+ MY  CG ++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIE 462

Query: 163 DARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACA 222
           +A  +F +M  +DI +WN MI GY  +G G+  L  FE MK  GL+P+  T + VL+AC+
Sbjct: 463 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 522

Query: 223 MAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIW 282
               V++G  YF +M  +YG++P  +HY  +VD+LG++G L +A   +K +P  P A IW
Sbjct: 523 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 582

Query: 283 DALRIYARLHGNIELEDRAEELIFSYDP--------------------SMAPTVAKPPLP 342
             L   +R+HGN EL + A + IF+ +P                     +     +    
Sbjct: 583 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 642

Query: 343 PPRKQSATNMLEEKDRVREFRCAMPYKEEGEG--GKLKGLNGQMREAGYVPDTRYVLHDI 402
             +K    + +E +++   F     +  E +     L+ L+ +M++AGYV  T  VLHD+
Sbjct: 643 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 702

Query: 403 DEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIV 455
           +EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+
Sbjct: 703 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 762

[Close]
BLAST of Carg18632 vs. Swiss-Prot
Match: sp|Q9LTF4|PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-68
Identity = 144/369 (39.02%), Postives = 215/369 (58.27%), Query Frame = 0 

Query: 108 DYGICTALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVF 167
           DY   +++++ C N  LLE GR++  L   + F     + + L+ +YS CG  + A +VF
Sbjct: 217 DYSF-SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVE 227
           +++P +++  WN M+K Y ++      + LF+RMK  G++PN  TFL VL AC+ A  V+
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIY 287
           EG +YF+ M+ E  I P  +HY  +VD+LG++G L EA E I  +PI+PT  +W AL   
Sbjct: 337 EGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 ARLHGNIELEDRAEELIFSYDP-------SMAPTVAKPPL-------------PPPRKQS 347
             +H N EL   A + +F   P       S++   A                    +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 ATNMLEEKDRVREFRCAMPYKEEGEG--GKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F       E+ +    KL  L  +M +AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 455
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

[Close]
BLAST of Carg18632 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-68
Identity = 145/366 (39.62%), Postives = 203/366 (55.46%), Query Frame = 0 

Query: 113 TALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPD 172
           T +L++C     L  G+ V  L++ T F   + ++  LI MY+ CG + +ARR+FD M  
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483

Query: 173 RDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFY 232
           ++  TWN MI GYG +G+G   L +F  M + G+ P   TFL VL AC+ A  V+EG   
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 233 FNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHG 292
           FNSM + YG  P ++HY  +VD+LG++GHL  A +FI+ + I P + +W+ L    R+H 
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603

Query: 293 NIELEDRAEELIFSYDPS------MAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMP 352
           +  L     E +F  DP       +   +       P  Q+AT     K R         
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP--QAATVRQTAKKRKLAKAPGYT 663

Query: 353 YKEEGEG------------------GKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQAL 412
             E GE                    KL+ L G+MREAGY P+T   LHD++EE ++  +
Sbjct: 664 LIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 723

Query: 413 QYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 455
           + HSERLAIA+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHF
Sbjct: 724 KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHF 783

[Close]
BLAST of Carg18632 vs. TrEMBL
Match: tr|A0A1S3C9A6|A0A1S3C9A6_CUCME (pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=3656 GN=LOC103498440 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.1e-216
Identity = 383/454 (84.36%), Postives = 409/454 (90.09%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           M+SSI S  T NSI TTNF S IIP H PAVKSFR T    NALSNS  RK AR+YD Q+
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
           TTNTLS+SQN+TSDSV S PSTVDL+ALCE G+V+D LE+IGQGA +DYG+ TALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           N KLLEAGRRVD LLKGTKF GDV LNNKLIEMYS CGCMK+AR+VFDKMP++D RTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYGENGEGD GLALFE+MK+VGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFI+K+PINPTAKIWDALR YARLHGN+ELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EEL+FS DPS   T  KP LPP RKQS+TNMLEEKDRVREFR AMPYKEEGE GKLKGLN
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGE-GKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 453

[Close]
BLAST of Carg18632 vs. TrEMBL
Match: tr|A0A0A0LEV9|A0A0A0LEV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000530 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.2e-200
Identity = 356/454 (78.41%), Postives = 384/454 (84.58%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT 60
           M+SSIPS  T NS  TTNF SRI+P+H P +KSFR TL   NALSNS  RK A +YD Q+
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120
                                     ALCE G+V+DVLE+IGQGA +DYG+ TALLNSCC
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180
           N KLLEAGRRVD LLKGTKF GD+ LNN+LIEMYS CGCMKDAR+VFDKM ++D  +WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240
           MIKGYG+NGEGD GLALFE+MK+ GLQPNSETFLVVLAACAMAEAV+EG+FYF  M NEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300
           GI PEIEHYLGVVDVLGKSGHLIEAEEFI+K+PINPTAKIWDALR YARLHGN+ELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360
           EEL+FS DPS   T  KP LPP RKQS+TNMLEEKDRVREFRCAMPYKEEGE G+LKGLN
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGE-GRLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 453

[Close]
BLAST of Carg18632 vs. TrEMBL
Match: tr|A0A2N9FV74|A0A2N9FV74_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22439 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 9.0e-147
Identity = 266/410 (64.88%), Postives = 322/410 (78.54%), Query Frame = 0 

Query: 45  SNSSNRKPARRYDGQTTTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQG 104
           S+ +N+K       ++ +N    +    SD +   P  VDL+ LCE G+V  V+E++GQG
Sbjct: 72  SSQTNKK-------KSHSNEQKLNDENESDPLRGDPPNVDLMGLCEEGKVEQVVEYMGQG 131

Query: 105 ANLDYGICTALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDAR 164
            + DYG+  ALL+SC + K L+ G+RV+  LK + F GD+ LNNKLI MY  CG M+DAR
Sbjct: 132 VSADYGVFCALLDSCGDSKSLQVGKRVNEFLKRSPFRGDIELNNKLIGMYVRCGSMRDAR 191

Query: 165 RVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAE 224
           RVFDKM +R++ +W+LMI GY  NG+G+ GL LFE M+ VGLQP+SETF+VVLAACA  E
Sbjct: 192 RVFDKMRERNMNSWHLMIHGYAVNGQGNYGLLLFEEMRKVGLQPDSETFVVVLAACASVE 251

Query: 225 AVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDAL 284
           AV+EGL YFN M+NEY I+  IEHYLGV+DVLG SGHL EAEEFI+K+P+ PTA++W+AL
Sbjct: 252 AVKEGLMYFNLMKNEYRIVRGIEHYLGVIDVLGASGHLNEAEEFIEKMPVEPTAEVWEAL 311

Query: 285 RIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCA 344
             YAR+HG+IELEDR +EL+ S DPS +    K P+P  +K SA NMLEEK+RV E+RC 
Sbjct: 312 GTYARIHGDIELEDRVDELLVSLDPSKS-IADKIPIPVRKKHSAINMLEEKNRVSEYRCT 371

Query: 345 MPYKEEGEGGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLIST 404
            PYK  G   +LKGLNGQMREAGYVPDTRYVLHDIDE+AK+QALQYHSERLAIAYGLIST
Sbjct: 372 SPYKGGGY-ERLKGLNGQMREAGYVPDTRYVLHDIDEDAKEQALQYHSERLAIAYGLIST 431

Query: 405 PARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           P RTTLRIIKNLRICGDCHNAIKIMS+IVGRELIVRDNKRFHHFKDGKCS
Sbjct: 432 PPRTTLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCS 472

[Close]
BLAST of Carg18632 vs. TrEMBL
Match: tr|A5C1E4|A5C1E4_VITVI (Uncharacterized protein (Fragment) OS=Vitis vinifera OX=29760 GN=VITISV_013147 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.5e-146
Identity = 286/479 (59.71%), Postives = 346/479 (72.23%), Query Frame = 0 

Query: 1   MASSIPSQTTPNSIITTNFTSRIIPYHSPAVK----SFRP-----TLFCPNALSN----- 60
           MAS +    T NSIIT+NF +R IP HS A+     S  P      L C  AL N     
Sbjct: 1   MASXMSLNRTGNSIITSNFKAR-IPAHSSALPLKPISSSPQNPPLKLLCTYALPNHQPTN 60

Query: 61  --------SSNRKPARRYDGQTTTNTLSKSQNRT---SDSVLSLPSTVDLVALCEAGEVM 120
                   +++  P ++++GQ  T T   +QN     +++   + S VDL+ LCE G++ 
Sbjct: 61  KPRVFRRQTNSTHPPKQHNGQNLTGTQLNTQNANYPQTENFTVVHSGVDLMGLCEEGKIR 120

Query: 121 DVLEFIGQGANLDYGICTALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYS 180
           + +E++GQG   +YG+  A+L+SC   K LE GRRV  LL  +KF GDV LNNKLIEMY 
Sbjct: 121 EAVEYMGQGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIEMYG 180

Query: 181 CCGCMKDARRVFDKMPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLV 240
            CG M+DARRVFD+M +R++ +W+LMI GY  NG+G  GL LFERM+ VGL+P  ETF+ 
Sbjct: 181 RCGSMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFERMRKVGLRPVGETFVA 240

Query: 241 VLAACAMAEAVEEGLFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPIN 300
           VL+AC    +VEEGL YF  M+ E GIIP IEHYLGV+DVLGK GH+ EAEEF+ K+PI 
Sbjct: 241 VLSACG---SVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFGHINEAEEFVDKMPIE 300

Query: 301 PTAKIWDALRIYARLHGNIELEDRAEELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEK 360
           PTA++W+ALR +AR+HG IELEDRAEE++ + DPS A T  K P PP +KQ A NMLE K
Sbjct: 301 PTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAIT-DKIPTPPQKKQLAVNMLEGK 360

Query: 361 DRVREFRCAMPYKEEGEGGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERL 420
           +RV E+R   PYK +    KLKGLNGQMREAGYVPDTRYVLHDID+EAK+QAL YHSERL
Sbjct: 361 NRVSEYRSTNPYKGDAY-EKLKGLNGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERL 420

Query: 421 AIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           AIAYGLISTPART LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 421 AIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 473

[Close]
BLAST of Carg18632 vs. TrEMBL
Match: tr|A0A2P5BNT2|A0A2P5BNT2_PARAD (DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_222880 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.9e-146
Identity = 275/465 (59.14%), Postives = 338/465 (72.69%), Query Frame = 0 

Query: 15  ITTNFTSRIIPYHSPAVKSFRPTLFCPNALSNSSNRKPARRYDGQT---TTNTLSKSQ-- 74
           + TNF S   P+ + ++ +  P   C  A+ N+++   +RRY G T   +  +  K+Q  
Sbjct: 32  LKTNFFSLKTPFPASSLNAISPKPLCNYAVPNANSAGVSRRYGGATGRGSARSPYKTQPL 91

Query: 75  NRTSDSVLSLPS--------------------TVDLVALCEAGEVMDVLEFIGQGANLDY 134
            R   S+L  P+                    + DL+ALC  G++ +VLE +G G + DY
Sbjct: 92  ERRKKSLLQKPNPNDNQLNNQNENDPLRKNLQSADLIALCHDGKIEEVLELMGDGVSADY 151

Query: 135 GICTALLNSCCNFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDK 194
            + +ALL+SC + K LE G+RV   LK + F GD+ LN+KLI+MY  CG MKDAR+VFD+
Sbjct: 152 NVFSALLDSCRDPKSLEVGKRVHEFLKRSSFRGDIELNDKLIKMYGKCGSMKDARKVFDR 211

Query: 195 MPDRDIRTWNLMIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEG 254
           M +R   +W+LMI GY  NG G+ G+ LFE MK VGL P+ E+FL VLAACA AEAVEEG
Sbjct: 212 MTERSRSSWHLMINGYSVNGIGEDGIFLFEEMKKVGLDPDRESFLAVLAACASAEAVEEG 271

Query: 255 LFYFNSMENEYGIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYAR 314
           L Y  SM +EYGI+P IEHYLGV+DVLG SGHL EAE+FI+K+P+  T ++W+ LR +AR
Sbjct: 272 LQYLESMTSEYGIMPGIEHYLGVIDVLGMSGHLNEAEKFIEKMPVESTFEVWETLRNFAR 331

Query: 315 LHGNIELEDRAEELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKE 374
           +HG++ELEDR EEL+ + DPS A    K PLP  ++ SATNMLEEK+RV EFRC+ PYKE
Sbjct: 332 IHGDLELEDRVEELLVAMDPSKA-IANKFPLPQRKRHSATNMLEEKNRVTEFRCSNPYKE 391

Query: 375 EGEGGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTT 434
           E    KLKGLNGQMREAGYVPDTRYVLHDIDEEAK+QALQYHSERLAIAYGLISTP RTT
Sbjct: 392 EAY-QKLKGLNGQMREAGYVPDTRYVLHDIDEEAKEQALQYHSERLAIAYGLISTPPRTT 451

Query: 435 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 455
           LRI+KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS
Sbjct: 452 LRIMKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 494

The following BLAST results are available for this feature:
BLAST of Carg18632 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938077.19.2e-26098.90pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor... [more]
XP_022938076.19.2e-26098.90pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor... [more]
XP_023538219.11.1e-25798.24pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur... [more]
XP_022966045.12.0e-25196.26pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur... [more]
XP_008459269.11.6e-21684.36PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis m... [more]
BLAST of Carg18632 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15690.13.6e-9348.00Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G32450.19.6e-7036.53Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G02750.11.3e-6937.07Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G52630.11.3e-6939.02mitochondrial RNAediting factor 1[more]
AT4G30700.11.6e-6939.62Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg18632 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZQE5|PP153_ARATH6.6e-9248.00Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop... [more]
sp|Q9SUU7|PP346_ARATH1.7e-6836.53Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop... [more]
sp|Q9SY02|PP301_ARATH2.3e-6837.07Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
sp|Q9LTF4|PP429_ARATH2.3e-6839.02Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... [more]
sp|Q9SUH6|PP341_ARATH3.0e-6839.62Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg18632 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C9A6|A0A1S3C9A6_CUCME1.1e-21684.36pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=36... [more]
tr|A0A0A0LEV9|A0A0A0LEV9_CUCSA3.2e-20078.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000530 PE=4 SV=1[more]
tr|A0A2N9FV74|A0A2N9FV74_FAGSY9.0e-14764.88Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22439 PE=4 SV=1[more]
tr|A5C1E4|A5C1E4_VITVI4.5e-14659.71Uncharacterized protein (Fragment) OS=Vitis vinifera OX=29760 GN=VITISV_013147 P... [more]
tr|A0A2P5BNT2|A0A2P5BNT2_PARAD5.9e-14659.14DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_222... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: INTERPRO
TermDefinition
IPR006808ATP_synth_F0_gsu_mt
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR032867DYW_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18632-RACarg18632-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 355..449
e-value: 1.1E-32
score: 112.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 177..209
e-value: 7.3E-8
score: 30.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 174..221
e-value: 8.8E-10
score: 38.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..239
score: 6.259
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 143..173
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 108..142
score: 5.338
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..275
score: 5.207
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..208
score: 12.507
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 83..240
e-value: 1.7E-26
score: 95.3
IPR006808ATP synthase, F0 complex, subunit G, mitochondrialPFAMPF04718ATP-synt_Gcoord: 502..607
e-value: 2.7E-20
score: 73.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..73
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 52..375
NoneNo IPR availablePANTHERPTHR24015:SF363SUBFAMILY NOT NAMEDcoord: 52..375

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18632Csa2G000530Cucumber (Chinese Long) v2carcuB0913
Carg18632ClCG11G001840Watermelon (Charleston Gray)carwcgB0872
Carg18632CSPI02G00530Wild cucumber (PI 183967)carcpiB0933
Carg18632Cucsa.288520Cucumber (Gy14) v1carcgyB1017
Carg18632CmaCh12G013050Cucurbita maxima (Rimu)carcmaB1236
Carg18632CmoCh12G013390Cucurbita moschata (Rifu)carcmoB1207
Carg18632Lsi11G001960Bottle gourd (USVL1VR-Ls)carlsiB814
Carg18632Cp4.1LG07g10810Cucurbita pepo (Zucchini)carcpeB1248
Carg18632CsGy2G000500Cucumber (Gy14) v2carcgybB0885
Carg18632CsaV3_2G001550Cucumber (Chinese Long) v3carcucB0936
Carg18632Cla97C11G208240Watermelon (97103) v2carwmbB0935
Carg18632Cla97C07G140590Watermelon (97103) v2carwmbB0940
Carg18632Bhi06G001425Wax gourdcarwgoB1039
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18632Carg12267Silver-seed gourdcarcarB046
Carg18632Carg10812Silver-seed gourdcarcarB527
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18632Silver-seed gourdcarcarB108
Carg18632Silver-seed gourdcarcarB238
Carg18632Silver-seed gourdcarcarB528
Carg18632Cucumber (Gy14) v2carcgybB0881
Carg18632Cucumber (Gy14) v2carcgybB0882
Carg18632Cucumber (Gy14) v1carcgyB1014
Carg18632Cucumber (Gy14) v1carcgyB1016
Carg18632Cucurbita maxima (Rimu)carcmaB1234
Carg18632Cucurbita maxima (Rimu)carcmaB1235
Carg18632Cucurbita maxima (Rimu)carcmaB1237
Carg18632Cucurbita moschata (Rifu)carcmoB1205
Carg18632Cucurbita moschata (Rifu)carcmoB1206
Carg18632Cucurbita moschata (Rifu)carcmoB1208
Carg18632Cucurbita pepo (Zucchini)carcpeB1244
Carg18632Cucurbita pepo (Zucchini)carcpeB1245
Carg18632Cucurbita pepo (Zucchini)carcpeB1246
Carg18632Cucurbita pepo (Zucchini)carcpeB1247
Carg18632Wild cucumber (PI 183967)carcpiB0929
Carg18632Wild cucumber (PI 183967)carcpiB0931
Carg18632Cucumber (Chinese Long) v2carcuB0909
Carg18632Cucumber (Chinese Long) v2carcuB0911
Carg18632Cucumber (Chinese Long) v3carcucB0932
Carg18632Cucumber (Chinese Long) v3carcucB0934
Carg18632Bottle gourd (USVL1VR-Ls)carlsiB812
Carg18632Bottle gourd (USVL1VR-Ls)carlsiB817
Carg18632Melon (DHL92) v3.5.1carmeB0882
Carg18632Melon (DHL92) v3.5.1carmeB0883
Carg18632Melon (DHL92) v3.5.1carmeB0885
Carg18632Melon (DHL92) v3.6.1carmedB0890
Carg18632Melon (DHL92) v3.6.1carmedB0891
Carg18632Melon (DHL92) v3.6.1carmedB0893
Carg18632Watermelon (Charleston Gray)carwcgB0870
Carg18632Watermelon (Charleston Gray)carwcgB0875
Carg18632Watermelon (97103) v1carwmB0897
Carg18632Watermelon (97103) v1carwmB0898
Carg18632Watermelon (97103) v1carwmB0900
Carg18632Watermelon (97103) v2carwmbB0933
Carg18632Watermelon (97103) v2carwmbB0938
Carg18632Wax gourdcarwgoB1041
Carg18632Wax gourdcarwgoB1040
Carg18632Wax gourdcarwgoB1043