Carg18023 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18023
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Location	Cucurbita_argyrosperma_scaffold_171 : 456056 .. 461286 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCCAAAGTTTTCATATAAGGGAAATGACATGGACGCGATTTTCACGTTTTTCACAGATTTCTTACAATAATCTCTCGGCCCACAATGCATAAATCTTCATCTTCGTCTTAATCCGCTTCGAAATTATTCGATTTCTCTTATTTGATCATCTGGGACTGTACCAGTGAAGAGTTTCTCAGTCATCAATGGCTTCCTGTAATATCTCTTTTAGTTCGCGGCTTCGATTTCCATCCGTTTCGCCTAGAAAGAATTTCGCCGTCGATTCATTTGGGCCTCGCGGTTCATTTAATTTTGCGTCGAGGTCGAAACACCAGAAGAATCTACTCATTCAGAAGGCCATTAGATGTAATTCCACCGCTTCTAAACAACAAGTTGAGGTATAAATATGATTTCGTCTGTTCCTTTTGGAATTGTTGGAAATTTAATGGTTTATGATTCAAATGAAGAGTTTAAATTATGATCCAGTAGCATGCAGCATCGTCCTTACGCAATCTAAGTCTAAAAGGTTGTATCAGAGCAAGGTTAAGAGACAAATTTTGGTTATGTGATAAGGAATCAACCAAGGAAAAGCTCTTATACCAAATGATAAGTAACTAACGGAAAACTTTGATTCCAAATGATGAATCATTACATGGGAAGTAAGATTTGAATTACCTTGTTGTTCGAATATTTCAAGGCAAGAACACTTGTTTGAGATTCGAATCACTCCACAAGCAAGATCAATAATGTCTAGCTTGAATGATTCTAAACATGATCAATTTTGCTTGTGAGTGATTTGAATCTCAAACAAGTGTTCTTGTCTTGAGATATTCGATCAACAAGGTAATATGAATCTTAGTTTCCCTGTAGTGATTCCTTATTATTCGGTATTAAAACTTTCCTTTGGGTTGGTTCCTTATCATTTGGTATAAGAGCTTCCCCTAAGTTGATTCCTTATCATTTGGTATCAAAATTTTCTTTTGAGTTGGTTCCTTATCATTTGGTATTAGAGCTTTCCCATGGTTGATATTATCACAATGTCCCCTGAAAATTTGGGGCATTGTTTTGAAATTATGTTTGTTCATCGGTCTAATTTGTGATTGTTGGTTGGTTGCTGTTGGAAATTTGGTGGTTTATATATTTTCTGGAGAATTTTCAAACATCACTAGCATGCATGTAGTAATATCTCTTGGCAGTCTAAGTCTAGAAAGTCAGATCATTAGATCATTAGAGTTGGTATTAGAGCGAAGTTAAAGAAAGAAAGTTCGGGATTATGTTTGTTCATCGGTTTAATCTGTGATGGTGAGTTTGTTGTTGTTCGTAAATAGATTGTTTACGATGCTGATGAAAGGATAAACAAGTTAGCTGACGAAGTGGACCGAGATGCTCCTCTTTCGAGGCTTACCCTGTTCTCACCTTGCAAGGTAATAATGGTGTTACTTTAAGTCAAGCTTTGAAATGGTGGGGTTTGTCTCTTATGTTGAGTTTTGTTGATGCAGATTAATGTTTTCTTGAGAATAACTAAGAAGAGGGAAGATGGATATCATGATTTGGCATCTCTCTTTCACGTAAGTAATAGGGATTTTTGGATTTGATGTTATTATTCGATACAATCGGTACCGAGATTTTAAAGTCGATGCGAGTTTGATAAACTGTTCTATAGTCGGGCTTGTTTCGAGTATTTTGTCAAAATTTCTTTTGACAATGTTATTGGCTAAAAGCGCTTTTTATAATTCAAAAAGTCATACGAAACTCGACTTTACCGTTTTAGAAGGAATCGAGTTGTTAAGAAACTTTGAGTATCATCCATTTCTCTTAGCTGCTGAATTTTGGATGTTTTTTTCTTCTGTCTTTAGGTGATAAGCTTAGGGGATACAATTAAATTCTCTTTGTCGCCATCGAAGAAGGATCGCCTTTCGACCAATGTATCGGGGGTACCCCTTGATGATAGAAATTTGGTAGTCGTTCTCGAACAATGCTCTTATTCTATTTCTTCTGAGTTTTTTTTGTTGCCATAACTTATTTCTCTACCATATATCTTCAGATTATCAAGGCTCTTAACCTCTACAGGAAAAAGACTGGCTGTGACCAATTTTTCTGGGTGAGTATCTACAAAATGATTAGATATCTTTAATGAATGTCATAAAATCTACCTGAATGAATGGAAAACGTCGATACTCGATCGTGAAGTTTGGAACTATGGTTTTATGTGCGAGCAGATCCATCTCGACAAAAAGGTACCAACTGGAGCAGGGCTTGGTGGAGGAAGCAGTAATGCTGCAACTGCACTGTGGGCAGCCAATCAGTTCAGTGGATGTCTTGCTACTGAAAAGGATCTTCAACAATGGTCAAGTGAGATAGGATCTGATATTCCCTTCTTTTTCTCGGAAGGGGCGGCCTTCTGCACTGGGAGAGGTGAGGTATGTGTTGGGTTATGAAGTCTGCTGCTTATTTATAGCTTATTCAATTGTTATAGACAGTAAAACTATATATGCAAAATGGTCGTATATAGTAAACGATAGTAAAAAGTTGATAAAGATTGGTAAAACTATATATAAGTAAACTGAAACCATATATATACCCCTTAGGTAGTGTTTTGAAGATGTACTTTTTGCCTTCTCTGTATTCTCTATTAGTGTACATATACGAAGTCATCAATACAAACCTTTAGCCAATATTTCTCATTATTCTCTCCTGTTCTTTGTGGTCATTTAGATCAAATGTGTGCGTTATTGTGCGATCCTAACACACTAATGTTCTTTGTGTTCATCTCGATCGAGTGTGTGCGTAGTTGTGTGATCCTAACACTCATGTTCCTTGTGTTCATCTTTATCAAGTATGTGCATTATTGTGTGGTCCTAACAATATGTTTAGATAGCTACAAGCGTTAATAAGAAATATACAGTTGAATTTGGAAATGCCTATTATTTCTCTTTCGCATTGATACCCATAAGTTCTAGAAATTGGCATTTTGAGTCGGATTTGATAGAACGAGCGTCTTCTGTTTCAATCCATAAATCAGTGGACATAATCAAAGATTCTTTTGCTATTATCCATATACGAGTACTCGTGTTTATCATTATCCGCGTGCATCGCCTGGAATAGTTCGATTGCCAATGCTAATTCTGAAAACCAAGGAGCTCGGAGCTCGTGGTGTCTCTTTCTAAATGAATGATCTGTTCTTGGCTGGCATTTGAGGAACTTTTATGTTTTCTCTTTTACAGTTCGTGCAGAATATTCCTCCTCCGGTACCCTTGGACGTTCCGATGGTTCTCATAAAGCCCCAGGAAGCATGCTCTACAGCAGAAGTTTATAAGGTAATGGAAATTGTAGTATATGGTGAGAAAAAGAAGGAGAATTAGTTCTTGTTTCCATTGCATAATCAAGATTGGTTTATATTCCTCAGCGCTTACGGTTGGATCGAACGAGCGATGTCGATCCTTTATCATTGTTGGATAAAATCACAAAGAATGGAATATCACAAGATGTGTGTATCAATGATTTGGGTACGTGAGTTCGTTTAATGTTCACTCGAACAAGCATTCGAAAGCTAGTTCTTCAGTTCATTTGGATAGGTGAAATTACATAATGCTATGCCTTAAAACATCCGAGTTTGCCGAACATAATATCGTACCTGATTACTTTAAGCGATGTATGAACATTCATGACTTGCTTTGCATATCGACTTTAGAGTTACTGCTGATCGATCCCATTTTTGTAACGTGCATTATCGACTTTCGTGAATCTTTTGAGTTTCTTTTATGTTGACACATTTGTATTTATTTCGATCTTCGACATTCTTTCTCCTCAGAACCTCCTGCTTTTGAGGTCCTCCCGTCGCTTAAAAGATTGAAACAGCGAATAGTCTCTGCCAGCCGTGGCGAGTTTGATGCCGTTTTCATGTCCGGGAGGTAAGAACATCGAAATTATTATTTATCAGTTTATCCTTGTTCTATGCCGTTTTTATGCCAAGACAATGTCAGGTGTTCTTTGTTTTCCCTTGTAAAGCTTCTGATTAGGTAAGATTATTAGTATAAACATCTTATCATCACTTCAAATTTCATTTCATTCAGTGGTAGCACAATAGTAGGAATTGGGTCTCCAGATCCTCCAGGCTTCATCTATAACGACAACGAATTCCAGGACGTGTTTTTGGCAGGTAACAATCCGAATGCTCCTTAACTAGTTTCCTCTAGATTTTTCGACGTCGTGCTACCATCGATGCACAAGTCATTGTTTGGAAAATTTTGGAGCTTAAAATGCACTTCTAGTACACCATATTCGAGGATCTTACCATGTTCTTTCTGTAAACACTTTCGAAAGAAACTTCCTTTTCAATGTTCTTTGGAATACGTAACCGCATGAGCCCACTGCTAGCCATTACTATTCGCTTCGGCCCGTTATGTACTGTCGTCAACCTCGCAGTTTTAAAATGCATCTGTTAGGGAGAGGTTTTCACACCCTTCATTCTCCTCTATAATTGATGTGAGATCTCACAATCTACCCCCTTTAAGGGTGTGGAAACCTTGAGGCTGACGATAATCCGTAACGGGCTAAAACGGACAATATCTGTCAAGGGTGGACTTAGGATGTTAAAGAATATGTTTTGGGAAGTTTTATATTCACTTTTAATCGACTTTAAAGTAATAACTTCTTTATGTTGTCCTCGATGCATAATATTCTTAGAACTTTATATAGTAAGATTCCTATTGAATGAACATTCATAGATTTCCCTTTTCTCATGCGTTTTACATACTTCTCCAGTGCTTTATTAATTTGTTTCCAAATGTTTGGATGGAATCTTACCTGAAAAGTTCTGAATGCAGAGGCCAACTTTCTCACCCGTGAAGCGAATCAATGGTATCGAGAACCCGCTACAGCATCCGCGTGTAGTACACCGTCCGAGCGTCGCGAATCTGCTGCTGCATAACTGGCTCCTCCCTCCTAGGATGAAATAGAGGTTCAGCTTATGATTCCTGTAGACTGAGAATTCCTGTAGGACTTTAAACTACATCCATTGTTAACTTGCGAATTGATCTCGAGTTCTCATTTGTGACCTTAACTGGCTTTAATCTCGGTCTAGGAAAAAACGAGCGTGAATATAAACATTAATATTAATAATAATAATGCAAACGTTGAATTGGTATCGATCATCATTACTAGAACGCTTAGCTCAATGAGAAACATTCACCATGAAGAATCTAAAAGAAGGAACAAAAAAGCTATAAAGATTCAATCAAACTCACTTT

mRNA sequence

CACTCCAAAGTTTTCATATAAGGGAAATGACATGGACGCGATTTTCACGTTTTTCACAGATTTCTTACAATAATCTCTCGGCCCACAATGCATAAATCTTCATCTTCGTCTTAATCCGCTTCGAAATTATTCGATTTCTCTTATTTGATCATCTGGGACTGTACCAGTGAAGAGTTTCTCAGTCATCAATGGCTTCCTGTAATATCTCTTTTAGTTCGCGGCTTCGATTTCCATCCGTTTCGCCTAGAAAGAATTTCGCCGTCGATTCATTTGGGCCTCGCGGTTCATTTAATTTTGCGTCGAGGTCGAAACACCAGAAGAATCTACTCATTCAGAAGGCCATTAGATGTAATTCCACCGCTTCTAAACAACAAGTTGAGATTGTTTACGATGCTGATGAAAGGATAAACAAGTTAGCTGACGAAGTGGACCGAGATGCTCCTCTTTCGAGGCTTACCCTGTTCTCACCTTGCAAGATTAATGTTTTCTTGAGAATAACTAAGAAGAGGGAAGATGGATATCATGATTTGGCATCTCTCTTTCACGTGATAAGCTTAGGGGATACAATTAAATTCTCTTTGTCGCCATCGAAGAAGGATCGCCTTTCGACCAATGTATCGGGGGTACCCCTTGATGATAGAAATTTGATTATCAAGGCTCTTAACCTCTACAGGAAAAAGACTGGCTGTGACCAATTTTTCTGGATCCATCTCGACAAAAAGGTACCAACTGGAGCAGGGCTTGGTGGAGGAAGCAGTAATGCTGCAACTGCACTGTGGGCAGCCAATCAGTTCAGTGGATGTCTTGCTACTGAAAAGGATCTTCAACAATGGTCAAGAACTTTTATGTTTTCTCTTTTACAGTTCGTGCAGAATATTCCTCCTCCGGTACCCTTGGACGTTCCGATGGTTCTCATAAAGCCCCAGGAAGCATGCTCTACAGCAGAAGTTTATAAGCGCTTACGGTTGGATCGAACGAGCGATGTCGATCCTTTATCATTGTTGGATAAAATCACAAAGAATGGAATATCACAAGATGTGTGTATCAATGATTTGGAACCTCCTGCTTTTGAGGTCCTCCCGTCGCTTAAAAGATTGAAACAGCGAATAGTCTCTGCCAGCCGTGGCGAGTTTGATGCCGTTTTCATGTCCGGGAGTGGTAGCACAATAGTAGGAATTGGGTCTCCAGATCCTCCAGGCTTCATCTATAACGACAACGAATTCCAGGACGTGTTTTTGGCAGAGGCCAACTTTCTCACCCGTGAAGCGAATCAATGGTATCGAGAACCCGCTACAGCATCCGCGTGTAGTACACCGTCCGAGCGTCGCGAATCTGCTGCTGCATAACTGGCTCCTCCCTCCTAGGATGAAATAGAGGTTCAGCTTATGATTCCTGTAGACTGAGAATTCCTGTAGGACTTTAAACTACATCCATTGTTAACTTGCGAATTGATCTCGAGTTCTCATTTGTGACCTTAACTGGCTTTAATCTCGGTCTAGGAAAAAACGAGCGTGAATATAAACATTAATATTAATAATAATAATGCAAACGTTGAATTGGTATCGATCATCATTACTAGAACGCTTAGCTCAATGAGAAACATTCACCATGAAGAATCTAAAAGAAGGAACAAAAAAGCTATAAAGATTCAATCAAACTCACTTT

Coding sequence (CDS)

ATGGCTTCCTGTAATATCTCTTTTAGTTCGCGGCTTCGATTTCCATCCGTTTCGCCTAGAAAGAATTTCGCCGTCGATTCATTTGGGCCTCGCGGTTCATTTAATTTTGCGTCGAGGTCGAAACACCAGAAGAATCTACTCATTCAGAAGGCCATTAGATGTAATTCCACCGCTTCTAAACAACAAGTTGAGATTGTTTACGATGCTGATGAAAGGATAAACAAGTTAGCTGACGAAGTGGACCGAGATGCTCCTCTTTCGAGGCTTACCCTGTTCTCACCTTGCAAGATTAATGTTTTCTTGAGAATAACTAAGAAGAGGGAAGATGGATATCATGATTTGGCATCTCTCTTTCACGTGATAAGCTTAGGGGATACAATTAAATTCTCTTTGTCGCCATCGAAGAAGGATCGCCTTTCGACCAATGTATCGGGGGTACCCCTTGATGATAGAAATTTGATTATCAAGGCTCTTAACCTCTACAGGAAAAAGACTGGCTGTGACCAATTTTTCTGGATCCATCTCGACAAAAAGGTACCAACTGGAGCAGGGCTTGGTGGAGGAAGCAGTAATGCTGCAACTGCACTGTGGGCAGCCAATCAGTTCAGTGGATGTCTTGCTACTGAAAAGGATCTTCAACAATGGTCAAGAACTTTTATGTTTTCTCTTTTACAGTTCGTGCAGAATATTCCTCCTCCGGTACCCTTGGACGTTCCGATGGTTCTCATAAAGCCCCAGGAAGCATGCTCTACAGCAGAAGTTTATAAGCGCTTACGGTTGGATCGAACGAGCGATGTCGATCCTTTATCATTGTTGGATAAAATCACAAAGAATGGAATATCACAAGATGTGTGTATCAATGATTTGGAACCTCCTGCTTTTGAGGTCCTCCCGTCGCTTAAAAGATTGAAACAGCGAATAGTCTCTGCCAGCCGTGGCGAGTTTGATGCCGTTTTCATGTCCGGGAGTGGTAGCACAATAGTAGGAATTGGGTCTCCAGATCCTCCAGGCTTCATCTATAACGACAACGAATTCCAGGACGTGTTTTTGGCAGAGGCCAACTTTCTCACCCGTGAAGCGAATCAATGGTATCGAGAACCCGCTACAGCATCCGCGTGTAGTACACCGTCCGAGCGTCGCGAATCTGCTGCTGCATAA

Protein sequence

MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASKQQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSRTFMFSLLQFVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQDVFLAEANFLTREANQWYREPATASACSTPSERRESAAA

Homology

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BLAST of Carg18023 vs. NCBI nr
Match: XP_022933436.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 738.0 bits (1904), Expect = 1.6e-209
Identity = 379/399 (94.99%), Postives = 380/399 (95.24%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK
Sbjct: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV
Sbjct: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP 180
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP 180

Query: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQF 240
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWS        F FS          +F
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSSEIGSDIPFFFSEGAAFCTGRGEF 240

Query: 241 VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI 300
           VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI
Sbjct: 241 VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI 300

Query: 301 NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQ 360
           NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQ
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQ 360

Query: 361 DVFLAEANFLTREANQWYREPATASACSTPSERRESAAA 386
           DVFLAEANFLTREANQWYREPATASACSTPSERRESAAA
Sbjct: 361 DVFLAEANFLTREANQWYREPATASACSTPSERRESAAA 399

[Close]

BLAST of Carg18023 vs. NCBI nr
Match: XP_022933435.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 733.4 bits (1892), Expect = 3.9e-208
Identity = 379/400 (94.75%), Postives = 380/400 (95.00%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK
Sbjct: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV
Sbjct: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNL-IIKALNLYRKKTGCDQFFWIHLDKKV 180
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNL IIKALNLYRKKTGCDQFFWIHLDKKV
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLVIIKALNLYRKKTGCDQFFWIHLDKKV 180

Query: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQ 240
           PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWS        F FS          +
Sbjct: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSSEIGSDIPFFFSEGAAFCTGRGE 240

Query: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300
           FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC
Sbjct: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300

Query: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360
           INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF
Sbjct: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360

Query: 361 QDVFLAEANFLTREANQWYREPATASACSTPSERRESAAA 386
           QDVFLAEANFLTREANQWYREPATASACSTPSERRESAAA
Sbjct: 361 QDVFLAEANFLTREANQWYREPATASACSTPSERRESAAA 400

[Close]

BLAST of Carg18023 vs. NCBI nr
Match: XP_022967582.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 710.7 bits (1833), Expect = 2.7e-201
Identity = 366/398 (91.96%), Postives = 372/398 (93.47%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MAS NISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKN LIQKAIRCNSTASK
Sbjct: 1   MASSNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNPLIQKAIRCNSTASK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           QQVEIVYDADERINKLA+EVDR+APLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV
Sbjct: 61  QQVEIVYDADERINKLANEVDRNAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP 180
           I+LGDTIKFSLSP KKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP
Sbjct: 121 ITLGDTIKFSLSPLKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP 180

Query: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQF 240
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQ+WS        F FS          +F
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEF 240

Query: 241 VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI 300
           VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI
Sbjct: 241 VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI 300

Query: 301 NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQ 360
           NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFP 360

Query: 361 DVFLAEANFLTREANQWYREPATASACSTPSERRESAA 385
           DVFLAEANFLTREANQWYREPATASACS  SE R+SAA
Sbjct: 361 DVFLAEANFLTREANQWYREPATASACSPRSEHRKSAA 398

[Close]

BLAST of Carg18023 vs. NCBI nr
Match: XP_022967572.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 706.1 bits (1821), Expect = 6.7e-200
Identity = 366/399 (91.73%), Postives = 372/399 (93.23%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MAS NISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKN LIQKAIRCNSTASK
Sbjct: 1   MASSNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNPLIQKAIRCNSTASK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           QQVEIVYDADERINKLA+EVDR+APLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV
Sbjct: 61  QQVEIVYDADERINKLANEVDRNAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNL-IIKALNLYRKKTGCDQFFWIHLDKKV 180
           I+LGDTIKFSLSP KKDRLSTNVSGVPLDDRNL IIKALNLYRKKTGCDQFFWIHLDKKV
Sbjct: 121 ITLGDTIKFSLSPLKKDRLSTNVSGVPLDDRNLVIIKALNLYRKKTGCDQFFWIHLDKKV 180

Query: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQ 240
           PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQ+WS        F FS          +
Sbjct: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGE 240

Query: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300
           FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC
Sbjct: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300

Query: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360
           INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF
Sbjct: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360

Query: 361 QDVFLAEANFLTREANQWYREPATASACSTPSERRESAA 385
            DVFLAEANFLTREANQWYREPATASACS  SE R+SAA
Sbjct: 361 PDVFLAEANFLTREANQWYREPATASACSPRSEHRKSAA 399

[Close]

BLAST of Carg18023 vs. NCBI nr
Match: XP_022147682.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Momordica charantia])

HSP 1 Score: 649.0 bits (1673), Expect = 9.8e-183
Identity = 334/398 (83.92%), Postives = 358/398 (89.95%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQK-AIRCNSTAS 60
           MA C I F+S+L+FP++S RKNFA +S G  GSF F SRSK++K+ LIQK AI CNSTAS
Sbjct: 1   MAFCTIPFNSQLQFPAISFRKNFACNSVGSHGSFAFPSRSKNRKSSLIQKTAITCNSTAS 60

Query: 61  KQQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFH 120
           KQQVEIVY+ DERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFH
Sbjct: 61  KQQVEIVYNPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFH 120

Query: 121 VISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKV 180
           VISLGDTIKFSLSPSKKDRLSTNVSGVPLDD+NLIIKALNLYRKKTG + FFWIHLDKKV
Sbjct: 121 VISLGDTIKFSLSPSKKDRLSTNVSGVPLDDKNLIIKALNLYRKKTGSENFFWIHLDKKV 180

Query: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQ 240
           PTGAGLGGGSSNAATALWAAN+FSGCLATEKDLQ+WS        F FS          +
Sbjct: 181 PTGAGLGGGSSNAATALWAANKFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAYCTGRGE 240

Query: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300
            VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLD+TS +DPLSLLD+ITKNGISQDVC
Sbjct: 241 VVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSGIDPLSLLDQITKNGISQDVC 300

Query: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360
           INDLEPPAF+VLPSLKRLKQRI+SASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYND+EF
Sbjct: 301 INDLEPPAFDVLPSLKRLKQRIISASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEF 360

Query: 361 QDVFLAEANFLTREANQWYREPATASACSTPSERRESA 384
           QDVFLAEANFLTREANQWY+EPA+ASACS PSE  +SA
Sbjct: 361 QDVFLAEANFLTREANQWYQEPASASACSPPSEHLDSA 398

[Close]

BLAST of Carg18023 vs. TAIR10
Match: AT2G26930.1 (4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase)

HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-142
Identity = 258/395 (65.32%), Postives = 315/395 (79.75%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MA+ +  F S L F + S  K  +  SF P+               L++  +  +  AS+
Sbjct: 1   MATASPPFISTLSF-THSSFKTSSSSSFSPK---------------LLRPLLSFSVKASR 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           +QVEIV+D DER+NK+ D+VD++APLSRL LFSPCKINVFLRIT KREDG+HDLASLFHV
Sbjct: 61  KQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRITGKREDGFHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKV 180
           ISLGDTIKFSLSPSK KDRLSTNV GVP+D RNLIIKALNLYRKKTG ++FFWIHLDKKV
Sbjct: 121 ISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRKKTGSNRFFWIHLDKKV 180

Query: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQ 240
           PTGAGLGGGSSNAATALWAAN+ +G L TE +LQ WS        F FS          +
Sbjct: 181 PTGAGLGGGSSNAATALWAANELNGGLVTENELQDWSSEIGSDIPFFFSHGAAYCTGRGE 240

Query: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300
            VQ++PPP PLD+PMVLIKP+EACSTAEVYKRLRLD+TS+++PL+LL+ +T NG+SQ +C
Sbjct: 241 IVQDLPPPFPLDLPMVLIKPREACSTAEVYKRLRLDQTSNINPLTLLENVTSNGVSQSIC 300

Query: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360
           +NDLEPPAF VLPSLKRLKQRI+++ RGE+DAVFMSGSGSTI+GIGSPDPP FIY+D E+
Sbjct: 301 VNDLEPPAFSVLPSLKRLKQRIIASGRGEYDAVFMSGSGSTIIGIGSPDPPQFIYDDEEY 360

Query: 361 QDVFLAEANFLTREANQWYREPATASACSTPSERR 381
           ++VFL+EANF+TREAN+WY+EPA+A+A ++ +E R
Sbjct: 361 KNVFLSEANFMTREANEWYKEPASANATTSSAESR 379

[Close]

BLAST of Carg18023 vs. Swiss-Prot
Match: sp|O81014|ISPE_ARATH (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPE PE=2 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.2e-141
Identity = 258/395 (65.32%), Postives = 315/395 (79.75%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MA+ +  F S L F + S  K  +  SF P+               L++  +  +  AS+
Sbjct: 1   MATASPPFISTLSF-THSSFKTSSSSSFSPK---------------LLRPLLSFSVKASR 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           +QVEIV+D DER+NK+ D+VD++APLSRL LFSPCKINVFLRIT KREDG+HDLASLFHV
Sbjct: 61  KQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRITGKREDGFHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKV 180
           ISLGDTIKFSLSPSK KDRLSTNV GVP+D RNLIIKALNLYRKKTG ++FFWIHLDKKV
Sbjct: 121 ISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRKKTGSNRFFWIHLDKKV 180

Query: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQ 240
           PTGAGLGGGSSNAATALWAAN+ +G L TE +LQ WS        F FS          +
Sbjct: 181 PTGAGLGGGSSNAATALWAANELNGGLVTENELQDWSSEIGSDIPFFFSHGAAYCTGRGE 240

Query: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300
            VQ++PPP PLD+PMVLIKP+EACSTAEVYKRLRLD+TS+++PL+LL+ +T NG+SQ +C
Sbjct: 241 IVQDLPPPFPLDLPMVLIKPREACSTAEVYKRLRLDQTSNINPLTLLENVTSNGVSQSIC 300

Query: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360
           +NDLEPPAF VLPSLKRLKQRI+++ RGE+DAVFMSGSGSTI+GIGSPDPP FIY+D E+
Sbjct: 301 VNDLEPPAFSVLPSLKRLKQRIIASGRGEYDAVFMSGSGSTIIGIGSPDPPQFIYDDEEY 360

Query: 361 QDVFLAEANFLTREANQWYREPATASACSTPSERR 381
           ++VFL+EANF+TREAN+WY+EPA+A+A ++ +E R
Sbjct: 361 KNVFLSEANFMTREANEWYKEPASANATTSSAESR 379

[Close]

BLAST of Carg18023 vs. Swiss-Prot
Match: sp|P93841|ISPE_SOLLC (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (Fragment) OS=Solanum lycopersicum OX=4081 GN=ISPE PE=1 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 2.8e-141
Identity = 257/365 (70.41%), Postives = 299/365 (81.92%), Query Frame = 0


Query: 30  PRGSFNFASRSKHQKN-LLIQKAIRCNSTASKQQVEIVYDADERINKLADEVDRDAPLSR 89
           P GS  F    + ++N  +I KA    S  SK+QVEI Y+ +E+ NKLADEVDR+A LSR
Sbjct: 31  PHGSSYFNKNIQFRRNSFVIVKA--SGSRTSKKQVEITYNPEEKFNKLADEVDREAGLSR 90

Query: 90  LTLFSPCKINVFLRITKKREDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGVP 149
           LTLFSPCKINVFLRIT KR+DGYHDLASLFHVISLGD IKFSLSPSK KDRLSTNV+GVP
Sbjct: 91  LTLFSPCKINVFLRITSKRDDGYHDLASLFHVISLGDKIKFSLSPSKSKDRLSTNVAGVP 150

Query: 150 LDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLA 209
           LD+RNLIIKALNLYRKKTG D +FWIHLDKKVPTGAGLGGGSSNAAT LWAANQFSGC+A
Sbjct: 151 LDERNLIIKALNLYRKKTGTDNYFWIHLDKKVPTGAGLGGGSSNAATTLWAANQFSGCVA 210

Query: 210 TEKDLQQWSR------TFMFS--------LLQFVQNIPPPVPLDVPMVLIKPQEACSTAE 269
           TEK+LQ+WS        F FS          + VQ+IP P+P D+PMVLIKPQ+ACSTAE
Sbjct: 211 TEKELQEWSGEIGSDIPFFFSHGAAYCTGRGEVVQDIPSPIPFDIPMVLIKPQQACSTAE 270

Query: 270 VYKRLRLDRTSDVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLKRLKQRIVSASRG 329
           VYKR +LD +S VDPLSLL+KI+ +GISQDVC+NDLEPPAFEVLPSLKRLKQR+++A RG
Sbjct: 271 VYKRFQLDLSSKVDPLSLLEKISTSGISQDVCVNDLEPPAFEVLPSLKRLKQRVIAAGRG 330

Query: 330 EFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQDVFLAEANFLTREANQWYREPATASAC 379
           ++DAVFMSGSGSTIVG+GSPDPP F+Y+D E++DVFL+EA+F+TR AN+WY EP + S  
Sbjct: 331 QYDAVFMSGSGSTIVGVGSPDPPQFVYDDEEYKDVFLSEASFITRPANEWYVEPVSGSTI 390

[Close]

BLAST of Carg18023 vs. Swiss-Prot
Match: sp|P56848|ISPE_MENPI (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Mentha piperita OX=34256 GN=ISPE PE=1 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.6e-136
Identity = 250/388 (64.43%), Postives = 303/388 (78.09%), Query Frame = 0


Query: 7   SFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASKQQVEIV 66
           S++S+  F S +        SF P GS +F  + +  + + I +A   + T  + Q+E+V
Sbjct: 17  SYNSKSHFNSFTNATFPQFSSFKPNGSSSFRKKLQSSR-IHIIRAAASDPTTGRNQLEVV 76

Query: 67  YDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHVISLGDT 126
           YD + ++NKLADEVDR+A +SRLTLFSPCKINVFLRIT KREDG+HDLASLFHVISLGD 
Sbjct: 77  YDLENKLNKLADEVDREAGISRLTLFSPCKINVFLRITGKREDGFHDLASLFHVISLGDK 136

Query: 127 IKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVPTGAGL 186
           IKFSLSPSK      TNV GVPLD++NLIIKALNL+RKKTG D+ FWIHLDKKVPTGAGL
Sbjct: 137 IKFSLSPSKFNGSFVTNVPGVPLDEKNLIIKALNLFRKKTGTDKHFWIHLDKKVPTGAGL 196

Query: 187 GGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQFVQNIP 246
           GGGSSNAATALWAANQFSGC+ATEKDLQ+WS        F FS          + V++IP
Sbjct: 197 GGGSSNAATALWAANQFSGCIATEKDLQEWSGEIGSDIPFFFSHGAAYCTGRGEVVEDIP 256

Query: 247 PPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCINDLEP 306
           PPVP D+ MVL+KPQEAC T EVYKRLRLD+TSD+DPL LL+KI+K GISQDVC+NDLEP
Sbjct: 257 PPVPRDLSMVLMKPQEACPTGEVYKRLRLDQTSDIDPLVLLEKISKGGISQDVCVNDLEP 316

Query: 307 PAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQDVFLA 366
           PAFEV+PSLKRLKQRI +A R ++DAVFMSGSGSTIVG+GSPDPP F+Y+ +E++++F +
Sbjct: 317 PAFEVVPSLKRLKQRIAAAGRSQYDAVFMSGSGSTIVGVGSPDPPQFVYDGDEYKNIFFS 376

Query: 367 EANFLTREANQWYREP-ATASACSTPSE 379
           EA F+TR ANQWY EP +T  + S P +
Sbjct: 377 EAKFITRSANQWYSEPLSTDESPSFPQD 403

[Close]

BLAST of Carg18023 vs. Swiss-Prot
Match: sp|Q8S2G0|ISPE_ORYSJ (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPE PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 5.4e-132
Identity = 232/338 (68.64%), Postives = 281/338 (83.14%), Query Frame = 0


Query: 52  IRCNSTASKQQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGY 111
           +  ++   ++QVE+ YD   + NKLAD++D++A ++RL LFSPCKINVFLRIT KR DG+
Sbjct: 51  VAASAEQGRRQVEVEYDLQAKFNKLADQIDQNAGITRLNLFSPCKINVFLRITGKRPDGF 110

Query: 112 HDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQF 171
           HDLASLFHVISLGDTIKFSLSPSK KDRLSTNV+GVP+D+ NLIIKALNLYRKKTG D F
Sbjct: 111 HDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVAGVPVDESNLIIKALNLYRKKTGTDNF 170

Query: 172 FWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS-- 231
           FWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGC+A+EK+LQ+WS        F FS  
Sbjct: 171 FWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCIASEKELQEWSGEIGSDIPFFFSQG 230

Query: 232 ------LLQFVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKIT 291
                   + V++I  P+P ++PMVL+KP EACSTAEVYKRLRL+ TS  DPL LL +IT
Sbjct: 231 AAYCTGRGEIVEDIRNPLPANLPMVLVKPPEACSTAEVYKRLRLEHTSQTDPLVLLKEIT 290

Query: 292 KNGISQDVCINDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPP 351
           +NGISQD C+NDLEPPAFEVLPSLKRLK+RI++A+RG++DAVFMSGSGSTIVGIGSPDPP
Sbjct: 291 ENGISQDACVNDLEPPAFEVLPSLKRLKKRIIAANRGDYDAVFMSGSGSTIVGIGSPDPP 350

Query: 352 GFIYNDNEFQDVFLAEANFLTREANQWYREPATASACS 375
            F+Y+D++++D F++EA FLTR  N+WYREP ++   S
Sbjct: 351 AFVYDDDDYKDTFVSEACFLTRNENEWYREPISSKITS 388

[Close]

BLAST of Carg18023 vs. Swiss-Prot
Match: sp|Q6MAT6|ISPE_PARUW (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=ispE PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.2e-44
Identity = 112/290 (38.62%), Postives = 152/290 (52.41%), Query Frame = 0


Query: 89  LTLFSPCKINVFLRITKKREDGYHDLASLFHVISLGDTIKFSLSPSKKDRLSTNVSGVPL 148
           + LFSP KIN+FL++  KR DGYH+L+SLF  IS GD + F       D L+ +   +P 
Sbjct: 15  IRLFSPAKINLFLKVIGKRADGYHELSSLFQTISAGDILTFQRQTI--DTLTCSDPYLPT 74

Query: 149 DDRNLIIKALNLYRKKTGCDQFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLAT 208
           DD NL++KA+ L+R KTG D    IHLDK++P+ AGLGGGSSNAAT LWA NQ +G + T
Sbjct: 75  DDSNLVLKAMRLFRSKTGLDLHLRIHLDKRLPSQAGLGGGSSNAATTLWACNQLAGEIVT 134

Query: 209 EKDLQQWSR------TFMFS--------LLQFVQNIPPPVPLDVPMVLIKPQEACSTAEV 268
            ++L QW         F FS          + V ++ P     +   ++KP    ST EV
Sbjct: 135 TEELMQWGSEIGADIPFFFSKGTAHCTGRGECVNSLEPLAHCKI--WIVKPPFGLSTPEV 194

Query: 269 YKRLRLDRTSDVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLKRLKQRIVSASRGE 328
           YK L   + ++       +        +    NDLE  AFE+ P LK LK  ++S+    
Sbjct: 195 YKHLNFSQPNE-------NNNDYASFKEKPYFNDLEASAFEIKPELKILKNTLLSSG--- 254

Query: 329 FDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQDVFLAEANFLTREANQWY 365
           FD V MSGSGS+   IG    P                A F+ R +N+WY
Sbjct: 255 FDTVLMSGSGSSFFCIGQGQIPA---------SFKAFSAYFINRSSNRWY 281

[Close]

BLAST of Carg18023 vs. TrEMBL
Match: tr|A0A1S3BQ16|A0A1S3BQ16_CUCME (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492448 PE=3 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 3.3e-179
Identity = 330/399 (82.71%), Postives = 349/399 (87.47%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MASC+I  SS+L+F S+S RKNFA +S G  GS  FASR K       QKAI CNSTASK
Sbjct: 1   MASCSIPCSSQLQFHSISFRKNFAFNSHGSHGSLAFASRLKQ------QKAITCNSTASK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           QQ EIVYD DERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV
Sbjct: 61  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP 180
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTG D+FFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 180

Query: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWS--------------RTFMFSLLQF 240
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQ+WS                F     + 
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSGEIGSDIPFFFSDGAAFCTGRGEI 240

Query: 241 VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI 300
           VQN+PPPVPLDVPMVLIKPQEACSTAEVYKRLRLD+TS VDPLSLLDKITKNGISQDVCI
Sbjct: 241 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 300

Query: 301 NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQ 360
           NDLEPPAFEVLPSLKRLKQRI+SASRGEFDAVFMSGSGSTIVGIGSPDPPGFIY+D EF+
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIISASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYDDEEFR 360

Query: 361 DVFLAEANFLTREANQWYREPATASACSTPSERRESAAA 386
           DVFLAEANFLTRE N+WY+EPA++SACS PSE  ES++A
Sbjct: 361 DVFLAEANFLTREPNKWYQEPASSSACSPPSEHPESSSA 393

[Close]

BLAST of Carg18023 vs. TrEMBL
Match: tr|A0A0A0LZC4|A0A0A0LZC4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600780 PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 1.5e-176
Identity = 326/399 (81.70%), Postives = 347/399 (86.97%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MASC+I  SS+L+F S+S RKNFA +S G +GS  FASR K       Q+AI CNSTASK
Sbjct: 1   MASCSILCSSQLQFHSISFRKNFAFNSHGSQGSLAFASRLKQ------QRAITCNSTASK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           QQ EIVYD DERI+KLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV
Sbjct: 61  QQFEIVYDPDERISKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVP 180
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTG D FFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDNFFWIHLDKKVP 180

Query: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWS--------------RTFMFSLLQF 240
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQ+WS                F     + 
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSGEIGSDIPFFFSDGAAFCTGRGEV 240

Query: 241 VQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCI 300
           VQN+PPPVPLDVPMVLIKPQEACSTAEVYKRLRLD+TS VDP SLLDKITKNGISQDVCI
Sbjct: 241 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPSSLLDKITKNGISQDVCI 300

Query: 301 NDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQ 360
           NDLEPPAFEVLPSLKRLKQRI+SASRG FDAVFMSGSGSTIVGIGSPDPPGFIY+D EF+
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIISASRGGFDAVFMSGSGSTIVGIGSPDPPGFIYDDEEFR 360

Query: 361 DVFLAEANFLTREANQWYREPATASACSTPSERRESAAA 386
           DVFLAEANFLTRE N+WY+EPA++SACS PSE  ES++A
Sbjct: 361 DVFLAEANFLTREPNKWYQEPASSSACSPPSEHPESSSA 393

[Close]

BLAST of Carg18023 vs. TrEMBL
Match: tr|A0A2P4L0Y1|A0A2P4L0Y1_QUESU (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, chloroplastic/chromoplastic OS=Quercus suber OX=58331 GN=CFP56_40153 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 7.2e-150
Identity = 273/365 (74.79%), Postives = 316/365 (86.58%), Query Frame = 0


Query: 28  FGPRGSFNFASRSKHQKNLLIQKAIRCNSTASKQQVEIVYDADERINKLADEVDRDAPLS 87
           F P GS +F S S+ ++   I+     ++T ++++VE+VY+ +ERINKLADEVD++APLS
Sbjct: 36  FKPNGSSSFHSNSQFKR---IRAMASDSNTPTRRKVEVVYNPEERINKLADEVDKEAPLS 95

Query: 88  RLTLFSPCKINVFLRITKKREDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGV 147
           RLTLFSPCK+NVFLRIT KREDG+HDLASLFHVISLGD +KFSLSPSK KD LSTNVSGV
Sbjct: 96  RLTLFSPCKVNVFLRITNKREDGFHDLASLFHVISLGDILKFSLSPSKTKDSLSTNVSGV 155

Query: 148 PLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCL 207
           PLDDRNLIIKALNLYRKKTG ++FFWIHLDKKVPTGAGLGGGSSNAATALWAANQF+GCL
Sbjct: 156 PLDDRNLIIKALNLYRKKTGSEKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFNGCL 215

Query: 208 ATEKDLQQWSR------TFMFS--------LLQFVQNIPPPVPLDVPMVLIKPQEACSTA 267
           ATEK+LQ+WS        F FS          + VQNIPPPVPLD+PMVLIKPQ+ACSTA
Sbjct: 216 ATEKELQEWSSEIGSDVPFFFSQGAAYCTGRGEVVQNIPPPVPLDIPMVLIKPQQACSTA 275

Query: 268 EVYKRLRLDRTSDVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLKRLKQRIVSASR 327
           EVYKRLRLD+TS VDPL+LL+KI+ NGISQDVCINDLEPPAFEVLPSL+RLKQR+ +ASR
Sbjct: 276 EVYKRLRLDQTSKVDPLTLLEKISTNGISQDVCINDLEPPAFEVLPSLRRLKQRVNAASR 335

Query: 328 GEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEFQDVFLAEANFLTREANQWYREPATASA 378
           G++DAVFMSGSGSTIVGIGSPDPP F+Y+D E+ DVFL+EANFLTREANQWYREPA+ SA
Sbjct: 336 GQYDAVFMSGSGSTIVGIGSPDPPQFVYDDEEYNDVFLSEANFLTREANQWYREPASTSA 395

[Close]

BLAST of Carg18023 vs. TrEMBL
Match: tr|A0A1D8KVV9|A0A1D8KVV9_MORAL (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Morus alba OX=3498 GN=CMK PE=2 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.2e-149
Identity = 284/395 (71.90%), Postives = 325/395 (82.28%), Query Frame = 0


Query: 1   MASCNI-SFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTAS 60
           MAS +I   ++    P  S RK+ ++ SF   GS +F S+S+  K   ++  +     ++
Sbjct: 1   MASSHILCHNNVFNLPQNSSRKS-SLSSFSSHGSCSFGSKSRFAKTQFLKLLV-----SA 60

Query: 61  KQQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFH 120
           K+QVEIVYD DERINK ADEVD+ APLSRLTLFSPCKINVFLRIT KREDGYHDLASLFH
Sbjct: 61  KKQVEIVYDPDERINKWADEVDKQAPLSRLTLFSPCKINVFLRITNKREDGYHDLASLFH 120

Query: 121 VISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKK 180
           VISLGD +KFSLSPSK KD LSTN  GVPLDDRNLIIKALNLYRKKTG D +FWIHLDKK
Sbjct: 121 VISLGDVLKFSLSPSKTKDSLSTNAPGVPLDDRNLIIKALNLYRKKTGTDNYFWIHLDKK 180

Query: 181 VPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LL 240
           VPTGAGLGGGSSNAATALWAANQFSG LATEK+LQ+WS        F FS          
Sbjct: 181 VPTGAGLGGGSSNAATALWAANQFSGGLATEKELQEWSSEIGSDIPFFFSQGAAYCTGRG 240

Query: 241 QFVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDV 300
           + VQ+I PPVPLD+PM LIKPQEACSTAEVYKRLRLD+TS+VDPL LLDKI+++GISQD+
Sbjct: 241 EVVQDILPPVPLDIPMSLIKPQEACSTAEVYKRLRLDKTSNVDPLQLLDKISRDGISQDI 300

Query: 301 CINDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNE 360
           CINDLEPPAFEVLPSLKRLKQRI++A RG++DAVFMSGSGSTIVGIGSPDPP FIY+D E
Sbjct: 301 CINDLEPPAFEVLPSLKRLKQRIIAAGRGQYDAVFMSGSGSTIVGIGSPDPPQFIYDDEE 360

Query: 361 FQDVFLAEANFLTREANQWYREPATASA-CSTPSE 379
           ++DVFL+EANFLTREANQWY+EPA+ASA CS P++
Sbjct: 361 YKDVFLSEANFLTREANQWYKEPASASATCSPPND 389

[Close]

BLAST of Carg18023 vs. TrEMBL
Match: tr|A0A0L9VJA8|A0A0L9VJA8_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g071100 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.0e-148
Identity = 283/392 (72.19%), Postives = 324/392 (82.65%), Query Frame = 0


Query: 1   MASCNISFSSRLRFPSVSPRKNFAVDSFGPRGSFNFASRSKHQKNLLIQKAIRCNSTASK 60
           MA+ ++  SS +   S +  ++     F P GS  F S+ + Q+  L+ +A+  +S  SK
Sbjct: 1   MAASHLLCSSYVFPTSQNSFRSSHFSQFRPNGSSTFHSKLRFQRPHLV-RAMVSDSNTSK 60

Query: 61  QQVEIVYDADERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120
           +QVEIVYD + RINKLADEVDR+APLSRLTLFSPCKINVFLRIT KREDGYHDLASLFHV
Sbjct: 61  RQVEIVYDPEARINKLADEVDREAPLSRLTLFSPCKINVFLRITNKREDGYHDLASLFHV 120

Query: 121 ISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGCDQFFWIHLDKKV 180
           ISLGD IKFSLSPSK KD LSTNVSGVPLDDRNLIIKALNLYRKKTG D+FFWIHLDK+V
Sbjct: 121 ISLGDIIKFSLSPSKTKDSLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKRV 180

Query: 181 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQQWSR------TFMFS--------LLQ 240
           PTGAGLGGGSSNAATALWAANQFSGCLA+EK+LQ+WS        F FS          +
Sbjct: 181 PTGAGLGGGSSNAATALWAANQFSGCLASEKELQEWSSEIGSDIPFFFSQGAAYCTGRGE 240

Query: 241 FVQNIPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDRTSDVDPLSLLDKITKNGISQDVC 300
            VQNIPPPV LDVPMVLIKP EACSTAEVYKRLRLD+TS+VDPL+LLDKI+K GISQDVC
Sbjct: 241 VVQNIPPPVSLDVPMVLIKPPEACSTAEVYKRLRLDQTSNVDPLTLLDKISKIGISQDVC 300

Query: 301 INDLEPPAFEVLPSLKRLKQRIVSASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDNEF 360
           INDLEPPAFEVLPSLKRLKQRI +A RGE+ AVFMSGSGSTIVGIGSPDPP F+Y+D+E+
Sbjct: 301 INDLEPPAFEVLPSLKRLKQRISAAGRGEYGAVFMSGSGSTIVGIGSPDPPQFVYDDDEY 360

Query: 361 QDVFLAEANFLTREANQWYREPATASACSTPS 378
           +DVFL++A FLTREANQWY+EPA+  + ++ S
Sbjct: 361 KDVFLSDAYFLTREANQWYQEPASNPSSASAS 391

The following BLAST results are available for this feature:

BLAST of Carg18023 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933436.1	1.6e-209	94.99	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X2...	[more]
XP_022933435.1	3.9e-208	94.75	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X1...	[more]
XP_022967582.1	2.7e-201	91.96	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X2...	[more]
XP_022967572.1	6.7e-200	91.73	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like isoform X1...	[more]
XP_022147682.1	9.8e-183	83.92	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Momordica char...	[more]

BLAST of Carg18023 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26930.1	1.2e-142	65.32	4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase	[more]

BLAST of Carg18023 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81014\|ISPE_ARATH	2.2e-141	65.32	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Arabidopsis ...	[more]
sp\|P93841\|ISPE_SOLLC	2.8e-141	70.41	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (...	[more]
sp\|P56848\|ISPE_MENPI	3.6e-136	64.43	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Mentha piper...	[more]
sp\|Q8S2G0\|ISPE_ORYSJ	5.4e-132	68.64	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa...	[more]
sp\|Q6MAT6\|ISPE_PARUW	7.2e-44	38.62	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Protochlamydia amoebophila ...	[more]

BLAST of Carg18023 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQ16\|A0A1S3BQ16_CUCME	3.3e-179	82.71	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isoform X1 OS=C...	[more]
tr\|A0A0A0LZC4\|A0A0A0LZC4_CUCSA	1.5e-176	81.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600780 PE=3 SV=1	[more]
tr\|A0A2P4L0Y1\|A0A2P4L0Y1_QUESU	7.2e-150	74.79	4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, chloroplastic/chromoplastic O...	[more]
tr\|A0A1D8KVV9\|A0A1D8KVV9_MORAL	1.2e-149	71.90	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Morus alba OX=3498 GN=CMK P...	[more]
tr\|A0A0L9VJA8\|A0A0L9VJA8_PHAAN	1.0e-148	72.19	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g071100 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0050515	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016114	terpenoid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR020568	Ribosomal_S5_D2-typ_fold
IPR004424	IspE
IPR036554	GHMP_kinase_C_sf
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR006204	GHMP_kinase_N_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050515	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18023-RA	Carg18023-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006204	GHMP kinase N-terminal domain	PFAM	PF00288	GHMP_kinases_N	coord: 173..204 e-value: 5.8E-6 score: 26.3
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 73..220 e-value: 2.5E-40 score: 139.7
IPR036554	GHMP kinase, C-terminal domain superfamily	GENE3D	G3DSA:3.30.70.890		coord: 237..334 e-value: 2.6E-18 score: 68.3
IPR036554	GHMP kinase, C-terminal domain superfamily	SUPERFAMILY	SSF55060	GHMP Kinase, C-terminal domain	coord: 237..332
None	No IPR available	PANTHER	PTHR43527	FAMILY NOT NAMED	coord: 227..370 coord: 85..218
IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	HAMAP	MF_00061	IspE	coord: 89..370 score: 20.346
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	SSF54211	Ribosomal protein S5 domain 2-like	coord: 89..217

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18023	Cla011088	Watermelon (97103) v1	carwmB0163
Carg18023	Csa1G600780	Cucumber (Chinese Long) v2	carcuB0192
Carg18023	MELO3C015605	Melon (DHL92) v3.5.1	carmeB0178
Carg18023	ClCG03G014320	Watermelon (Charleston Gray)	carwcgB0165
Carg18023	CSPI01G29480	Wild cucumber (PI 183967)	carcpiB0199
Carg18023	Cucsa.142530	Cucumber (Gy14) v1	carcgyB0212
Carg18023	CmaCh10G009930	Cucurbita maxima (Rimu)	carcmaB0230
Carg18023	CmaCh11G007960	Cucurbita maxima (Rimu)	carcmaB0231
Carg18023	CmoCh11G008030	Cucurbita moschata (Rifu)	carcmoB0241
Carg18023	CmoCh10G010460	Cucurbita moschata (Rifu)	carcmoB0240
Carg18023	Lsi06G004190	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg18023	Cp4.1LG18g01120	Cucurbita pepo (Zucchini)	carcpeB0247
Carg18023	MELO3C015605.2	Melon (DHL92) v3.6.1	carmedB0182
Carg18023	CsaV3_1G041900	Cucumber (Chinese Long) v3	carcucB0199
Carg18023	Cla97C03G064510	Watermelon (97103) v2	carwmbB0178
Carg18023	Bhi02G001431	Wax gourd	carwgoB0221

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18023	Carg06137	Silver-seed gourd	carcarB017

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18023	Silver-seed gourd	carcarB209
Carg18023	Cucumber (Gy14) v2	carcgybB0186
Carg18023	Cucurbita pepo (Zucchini)	carcpeB0248