Carg06137 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06137
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Location	Cucurbita_argyrosperma_scaffold_026 : 1290510 .. 1294883 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAATATTCGACTAATCTTCCCTATTCCCACATCATTTGATTGCTCACTCAATTCCAAGAGTTCATAAAAGGAAACCAACAATGGATGCCAAAAACCCTGAATTCAGCGATGTAGATATCAATCCGTTCGCGAAATCTCATTAAAAAGACACCATCCATATTACAAATCTTCATCTTACTCTTAATCCTGTTTGAAATTCTTCAATTTTTCATTTCTAATCATCAGGGGATCGGTAGCTGCTGGTGAAGAATCATGTTCTCATCAATGGCTTCCTGTAACATCCCGTGCAGTTCAGGGTTCCAATTTCGGTCCATTTCTTTTAGAAGGAATTTCGTCTTCAATGGGCCACACGGTTCGCTCGCTTTTGCCTCGGGGTTGAAGCACCAGAAGAATCCACTCGTTCAAAGGGTCACTACATGCAATTCCGCCGCTTCCAAACAACAATTTGAGGTAAAAGTTTAGGTTTCTTTCGTTGGATTGGATAGATGTTTTGAAATTATGTTTGTTCATCGGTTTGATTCGGGATTTTGAGTTGGGAATTAGATAGTTTATGATCCTGATGAACGGATAAACAAGTTGGCTGATGAAGTAGACCGGGATGCTCCACTTTCGAGGCTTACTTTGTTCTCACCTTGCAAGGTAACAATGGAGTTTATTCATGTTAAGCTTTGGAAATGGTGGGTTTATCCCTTTTGTTGGGTTTATATGTTGAGTTTATTGATGCAGATTAATGTGTTCTTGAGAATAACTGAGAAGAGGGAAGATGGATATCATGATTTGGCCTCTCTTTTCCATGTAAGTATTGAAATGCTTCTATTTGATGATATTAGATGCTTTGTTACAGTAAATAGCCTTTTCAGAGTCCTGTTTTTGGTATGTTTTTGACGATGTTCTTGAATGCCATGAAATTTTTAGCTTGATAAAAGCATTTTTTACGATTCAAAAAGACGCACCAAACTCACTTTCCATCGTTTAGAAGAACCCGAGGTGTTTGATAACTCGGTTGGTGAATTTCGATGTTTTGTTCTCTTTTCCATGTAAGTAATGGGATGTTTCTATTTGATGATACTAGATGCCTTTTCAGGTCCTGATTTGAAGTGAAACACTTCGCTATGCCTGTTTTTGACAATGTTCTTGAATACCATGAAACTTTTAATTGGCTAAAACCACCTTTTACGACTCAAAAAGTCGTACCAAACTCACTTTTCATCGTTTAGAAGAATCCGAGGTGTTTGATAACTCGGTTGGTGAATTTGGATGTTTTGTTCTCTTGTCCATGTAAGTAATGAGATGCTTCTGTTTGATGATATTAGAAAAGCCTTTTCAGAGTCCTGATTTGAAGTGAAACACTTCTCTATGCCTGTTTTTGGTATGTTTTTGACAATGTTCTTGAATGCCATGAAACTTTTAGTTGGCTAAAAGCACTTTTTATGATTCAAAAAGTCGTACCAAACTCACTTTTCGTCGTTTAGAAGAATCTGAGGTGTTCAATAACTCGGCGGGTGAATTTGAATGTTTTGTTCTCTCTGCCATTAGGTGATAAGCTTAGGGGATACTATTAAGTTCTCATTGTCGCCATCGAAGAAGGACCGTCTTTCTACCAATGTATCGGGAGTACCCCTCGATGACAGAAATTTGGTAGTTTCTTTAGCATAATGCTCTTGTTGTTTTGTTTCTTCTGATGTTCTTTGTTTCCTTGGCTTATTTGTTTGTCATATATCTGCAGATTATCAAAGCTCTTAACCTCTACAGGAAGAAGACTGGTAGTGACAAGTTTTTCTGGGTGAGAATCTATGAAATGATTGAATATCTTCAATGAATGTCATGAAATCTTCTTGTATGAATGGAAAATGTTGAGAACCTATTGTAAAGTTTGGAATTGTTCGTTTATACACGAGCAGATCCATCTCGACAAGAAGGTACCGACTGGAGCGGGGCTTGGTGGAGGAAGCAGTAATGCTGCCACAGCACTGTGGGCGGCCAATCAGTTCAGTGGATGTCTTGCTACTGAAAAGGACCTTCAAGAATGGTCGAGCGAGATAGGCTCTGATATTCCCTTCTTTTTCTCGGAAGGGGCGGCGTTTTGTACCGGGAGAGGCGAGGTATGTCTAAATGACTACAGGCATTGATAAGAAATATACAATCACGTCGATACACGAAAGGTGCAGAAATTGGCATCTTGAGACAGGTTTTGATAGAATTGAGTGTCTTTGTTTTGAACTTACGTTAAGTATTTCTGCATACATCAGCTGGAATAGTTCGATTTCCATTGCTAATTCTAAAAACCGATGAGCTCATGACGACTCATTCTAGATGAATGCTTAACAAATTCTTTGTTACTACCTGGAATAGTTTGATTTCCAGTGCTAATTCTGAAAACCGATGAGCTCGTGCCGACTCATTATAGATGAATGCTTAACGAGTTCTCATGACAACTCATTCTAGATGAATGCTTAATAAGTTCTTTGTTACTAGCTAGAATAGTTCAATTGCCATTGCAATCTGAAAAGTGACGAGCTCGTGACGACTCATTCTAGATGCATTAACGAGTTCTCGTGACAACTCATTCTGGATGAATGCTTAATGAGTTCTTTGTTACTAGCTAGAATAGTTCGATTGCCATTGCTAATTCTGAAAAGCAATGAGCTCGTGACGACTGATTCTAGATGCATTAACGAGTTCTCGTGACAACTCATTCTAGATGAATGCTTAATGAGTTCTTGGTTACTAGCTAGAATAGTTCGATTTCCATTGCTAATTCTGAAAACCGATGAGCTCGTGACAACTCATTCTAGATGAATGCTTAACGAGTTTGTTTTTTACCAGGTTGTACAGAATCTTCCACCTCCAGTACCCTTGGACGTTCCAATGGTTCTCATAAAGCCCCAGGAAGCATGCTCTACAGCAGAAGTTTATAAGGTAATGGAAATTTTAGAACAAGCTGAAAGAAACTGAGAATTAGTTCTTATTTCCGTTTCATAATGAAGGCCGATTTGTATTCCTCAGCGCTTACGATTGGATCAAACAAGCAAGGTCGATCCTTTGTCGTTGTTGGATAAAATCACCAAGAACGGAATATCCCAAGATGTGTGTATCAACGATTTGGGTATGTGAGTTTGTCTAATGTTTACTCAAACGAGCGCTTGCAAGCTTGTGAAGTAGTTCGAGTTGGTGAAATTAGTACGTGTCGTAAATTACATGCTATATAATGAACGCCTTGAAACTTCAAGTTTGACGAACATAATATCGTACCAGATTAAGTGGCGTATGAACATTAGTGACTTGCTTAGCATATCAATTTGACCCTATTTTAGTAACATGCACTATGTCTTACAATCCTTGGCATTCCTTCTCTTCAGAACCTCCTGCTTTCGAGGTCCTCCCGTCTCTTAGAAGATTGAAACAGCGTATAATTTCTTCCAGCCGTGGCGAATTCGACGCTGTGTTCATGTCTGGGAGGTAAGAACATTAAGCGAATTCTTCGAACATCTCTCGATCTTTGTTCATATGCTGTTTTCATGCTATAGACAATATCAGATGTTTTCTGTTCATCATATCACCACCTCAAATTTCATTTCATGCAGTGGTAGCACAATAGTAGGAATTGGGTCCCCAGATCCTCCAGGCTTCATATATAACGACGATGAATTTCAGGACGTATTTTTGGCAGGTAACAACCCGAACGCTCCCTGGCTAGTTTCCTCTATATTTTTTACCTCGCACCACCATCGATGCACAAGTCCTCGTTGTAGGGACTTTTTTCATACCCTGTGCCCGTTAGAGAAGTTATATTCATTGGCTAGCCTGTAAAACTTACATGACCGATAACCGAACAGAAGTATAACTCCATATTTTAGTATTCGAAAAGTCATTCCAAACTCACCCTTTTAATAATTTTGACATCATCTGCTACACGTGCGGAAGAAGATAAACCAATTAAGCAAGATAAATATCGAATGAAAGAACGTATATGGATTTCTCTCTACTCTCAGCGATTTGTTTTGGTGTATTCTCAAATCAAATATTTGGATGCAATCTTACCTGAAAAGTTCTGAATGCAGAGGCAAACTTTCTCACCCGTGAAGCAAATCAATGGTATCGAGAGCCTGCATCGGCATCAGCTCGTAGTCCGCCTTCCGAGCATCCTGAATTGGCTAGATAGCTTGCTCATTGGATGAAATAGAGGTTCAGCTTATGTTCCTTGTTCTAGTGAGGATTCTTGTATGACAGTTAAACTACATCCTCCATTGATAAACTTGGGAAGGGATCTTGAGCTCTTTTTTCTATGCCAAAAGAGAGTTATTTAAGAAACTTATGTGATTTCCATGACCATTGCTAGAACATTTTCGTAAGTTAGAGAGCTCGCTAACG

mRNA sequence

TTTGAATATTCGACTAATCTTCCCTATTCCCACATCATTTGATTGCTCACTCAATTCCAAGAGTTCATAAAAGGAAACCAACAATGGATGCCAAAAACCCTGAATTCAGCGATGTAGATATCAATCCGTTCGCGAAATCTCATTAAAAAGACACCATCCATATTACAAATCTTCATCTTACTCTTAATCCTGTTTGAAATTCTTCAATTTTTCATTTCTAATCATCAGGGGATCGGTAGCTGCTGGTGAAGAATCATGTTCTCATCAATGGCTTCCTGTAACATCCCGTGCAGTTCAGGGTTCCAATTTCGGTCCATTTCTTTTAGAAGGAATTTCGTCTTCAATGGGCCACACGGTTCGCTCGCTTTTGCCTCGGGGTTGAAGCACCAGAAGAATCCACTCGTTCAAAGGGTCACTACATGCAATTCCGCCGCTTCCAAACAACAATTTGAGATAGTTTATGATCCTGATGAACGGATAAACAAGTTGGCTGATGAAGTAGACCGGGATGCTCCACTTTCGAGGCTTACTTTGTTCTCACCTTGCAAGATTAATGTGTTCTTGAGAATAACTGAGAAGAGGGAAGATGGATATCATGATTTGGCCTCTCTTTTCCATGTGATAAGCTTAGGGGATACTATTAAGTTCTCATTGTCGCCATCGAAGAAGGACCGTCTTTCTACCAATGTATCGGGAGTACCCCTCGATGACAGAAATTTGATTATCAAAGCTCTTAACCTCTACAGGAAGAAGACTGGTAGTGACAAGTTTTTCTGGATCCATCTCGACAAGAAGGTACCGACTGGAGCGGGGCTTGGTGGAGGAAGCAGTAATGCTGCCACAGCACTGTGGGCGGCCAATCAGTTCAGTGGATGTCTTGCTACTGAAAAGGACCTTCAAGAATGGTCGAGCGAGATAGGCTCTGATATTCCCTTCTTTTTCTCGGAAGGGGCGGCGTTTTGTACCGGGAGAGGCGAGGTTGTACAGAATCTTCCACCTCCAGTACCCTTGGACGTTCCAATGGTTCTCATAAAGCCCCAGGAAGCATGCTCTACAGCAGAAGTTTATAAGCGCTTACGATTGGATCAAACAAGCAAGGTCGATCCTTTGTCGTTGTTGGATAAAATCACCAAGAACGGAATATCCCAAGATGTGTGTATCAACGATTTGGAACCTCCTGCTTTCGAGGTCCTCCCGTCTCTTAGAAGATTGAAACAGCGTATAATTTCTTCCAGCCGTGGCGAATTCGACGCTGTGTTCATGTCTGGGAGTGGTAGCACAATAGTAGGAATTGGGTCCCCAGATCCTCCAGGCTTCATATATAACGACGATGAATTTCAGGACGTATTTTTGGCAGAGGCAAACTTTCTCACCCGTGAAGCAAATCAATGGTATCGAGAGCCTGCATCGGCATCAGCTCGTAGTCCGCCTTCCGAGCATCCTGAATTGGCTAGATAGCTTGCTCATTGGATGAAATAGAGGTTCAGCTTATGTTCCTTGTTCTAGTGAGGATTCTTGTATGACAGTTAAACTACATCCTCCATTGATAAACTTGGGAAGGGATCTTGAGCTCTTTTTTCTATGCCAAAAGAGAGTTATTTAAGAAACTTATGTGATTTCCATGACCATTGCTAGAACATTTTCGTAAGTTAGAGAGCTCGCTAACG

Coding sequence (CDS)

ATGTTCTCATCAATGGCTTCCTGTAACATCCCGTGCAGTTCAGGGTTCCAATTTCGGTCCATTTCTTTTAGAAGGAATTTCGTCTTCAATGGGCCACACGGTTCGCTCGCTTTTGCCTCGGGGTTGAAGCACCAGAAGAATCCACTCGTTCAAAGGGTCACTACATGCAATTCCGCCGCTTCCAAACAACAATTTGAGATAGTTTATGATCCTGATGAACGGATAAACAAGTTGGCTGATGAAGTAGACCGGGATGCTCCACTTTCGAGGCTTACTTTGTTCTCACCTTGCAAGATTAATGTGTTCTTGAGAATAACTGAGAAGAGGGAAGATGGATATCATGATTTGGCCTCTCTTTTCCATGTGATAAGCTTAGGGGATACTATTAAGTTCTCATTGTCGCCATCGAAGAAGGACCGTCTTTCTACCAATGTATCGGGAGTACCCCTCGATGACAGAAATTTGATTATCAAAGCTCTTAACCTCTACAGGAAGAAGACTGGTAGTGACAAGTTTTTCTGGATCCATCTCGACAAGAAGGTACCGACTGGAGCGGGGCTTGGTGGAGGAAGCAGTAATGCTGCCACAGCACTGTGGGCGGCCAATCAGTTCAGTGGATGTCTTGCTACTGAAAAGGACCTTCAAGAATGGTCGAGCGAGATAGGCTCTGATATTCCCTTCTTTTTCTCGGAAGGGGCGGCGTTTTGTACCGGGAGAGGCGAGGTTGTACAGAATCTTCCACCTCCAGTACCCTTGGACGTTCCAATGGTTCTCATAAAGCCCCAGGAAGCATGCTCTACAGCAGAAGTTTATAAGCGCTTACGATTGGATCAAACAAGCAAGGTCGATCCTTTGTCGTTGTTGGATAAAATCACCAAGAACGGAATATCCCAAGATGTGTGTATCAACGATTTGGAACCTCCTGCTTTCGAGGTCCTCCCGTCTCTTAGAAGATTGAAACAGCGTATAATTTCTTCCAGCCGTGGCGAATTCGACGCTGTGTTCATGTCTGGGAGTGGTAGCACAATAGTAGGAATTGGGTCCCCAGATCCTCCAGGCTTCATATATAACGACGATGAATTTCAGGACGTATTTTTGGCAGAGGCAAACTTTCTCACCCGTGAAGCAAATCAATGGTATCGAGAGCCTGCATCGGCATCAGCTCGTAGTCCGCCTTCCGAGCATCCTGAATTGGCTAGATAG

Protein sequence

MFSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAASKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR

Homology

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BLAST of Carg06137 vs. NCBI nr
Match: XP_022960704.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 805.4 bits (2079), Expect = 8.5e-230
Identity = 399/400 (99.75%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MFSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA 60
           MFSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA
Sbjct: 1   MFSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA 60

Query: 61  SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF 120
           SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF
Sbjct: 61  SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF 120

Query: 121 HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 180
           HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK
Sbjct: 121 HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 180

Query: 181 VPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 240
           VPTGAGLGGGSSNAATALWAANQFSGC+ATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG
Sbjct: 181 VPTGAGLGGGSSNAATALWAANQFSGCIATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 240

Query: 241 EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 300
           EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV
Sbjct: 241 EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 300

Query: 301 CINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 360
           CINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE
Sbjct: 301 CINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 360

Query: 361 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR 401
           FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR
Sbjct: 361 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR 400

[Close]

BLAST of Carg06137 vs. NCBI nr
Match: XP_023515762.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 801.6 bits (2069), Expect = 1.2e-228
Identity = 396/400 (99.00%), Postives = 399/400 (99.75%), Query Frame = 0


Query: 1   MFSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA 60
           M SSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA
Sbjct: 1   MLSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA 60

Query: 61  SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF 120
           SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF
Sbjct: 61  SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF 120

Query: 121 HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 180
           HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK
Sbjct: 121 HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 180

Query: 181 VPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 240
           VPTGAGLGGGSSNAATALWAANQFSGC+ATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG
Sbjct: 181 VPTGAGLGGGSSNAATALWAANQFSGCIATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 240

Query: 241 EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 300
           EVVQNLPPPVPLD+PMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV
Sbjct: 241 EVVQNLPPPVPLDIPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 300

Query: 301 CINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 360
           CINDLEPPAFEVLPSL+RLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE
Sbjct: 301 CINDLEPPAFEVLPSLKRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 360

Query: 361 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR 401
           FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR
Sbjct: 361 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR 400

[Close]

BLAST of Carg06137 vs. NCBI nr
Match: XP_022988144.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [Cucurbita maxima] >XP_022988145.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 789.3 bits (2037), Expect = 6.3e-225
Identity = 391/400 (97.75%), Postives = 394/400 (98.50%), Query Frame = 0


Query: 1   MFSSMASCNIPCSSGFQFRSISFRRNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAA 60
           M SSMASCNIPCSSGFQFRSISFRRN  FNGPHGSLAFASGLKHQKNPL+QRVTTCNSAA
Sbjct: 1   MLSSMASCNIPCSSGFQFRSISFRRNVAFNGPHGSLAFASGLKHQKNPLIQRVTTCNSAA 60

Query: 61  SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLF 120
           SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRIT KREDGYHDLASLF
Sbjct: 61  SKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITGKREDGYHDLASLF 120

Query: 121 HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 180
           HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK
Sbjct: 121 HVISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 180

Query: 181 VPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 240
           VPTGAGLGGGSSNAATALWAANQFSGC+ATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG
Sbjct: 181 VPTGAGLGGGSSNAATALWAANQFSGCIATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 240

Query: 241 EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 300
           EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV
Sbjct: 241 EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 300

Query: 301 CINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 360
           CINDLEPPAFEVLPSL+RLKQRII SSR EFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE
Sbjct: 301 CINDLEPPAFEVLPSLKRLKQRIIFSSREEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 360

Query: 361 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR 401
           FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR
Sbjct: 361 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELAR 400

[Close]

BLAST of Carg06137 vs. NCBI nr
Match: XP_008451044.1 (PREDICTED: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 723.0 bits (1865), Expect = 5.5e-205
Identity = 361/395 (91.39%), Postives = 374/395 (94.68%), Query Frame = 0


Query: 5   MASCNIPCSSGFQFRSISFRRNFVFN--GPHGSLAFASGLKHQKNPLVQRVTTCNSAASK 64
           MASC+IPCSS  QF SISFR+NF FN  G HGSLAFAS LK QK        TCNS ASK
Sbjct: 1   MASCSIPCSSQLQFHSISFRKNFAFNSHGSHGSLAFASRLKQQK------AITCNSTASK 60

Query: 65  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHV 124
           QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRIT+KREDGYHDLASLFHV
Sbjct: 61  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 125 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 184
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 180

Query: 185 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEV 244
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWS EIGSDIPFFFS+GAAFCTGRGE+
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSGEIGSDIPFFFSDGAAFCTGRGEI 240

Query: 245 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 304
           VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI
Sbjct: 241 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 300

Query: 305 NDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQ 364
           NDLEPPAFEVLPSL+RLKQRIIS+SRGEFDAVFMSGSGSTIVGIGSPDPPGFIY+D+EF+
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIISASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYDDEEFR 360

Query: 365 DVFLAEANFLTREANQWYREPASASARSPPSEHPE 398
           DVFLAEANFLTRE N+WY+EPAS+SA SPPSEHPE
Sbjct: 361 DVFLAEANFLTREPNKWYQEPASSSACSPPSEHPE 389

[Close]

BLAST of Carg06137 vs. NCBI nr
Match: XP_004144086.1 (PREDICTED: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Cucumis sativus] >KGN66389.1 hypothetical protein Csa_1G600780 [Cucumis sativus])

HSP 1 Score: 707.6 bits (1825), Expect = 2.4e-200
Identity = 356/395 (90.13%), Postives = 369/395 (93.42%), Query Frame = 0


Query: 5   MASCNIPCSSGFQFRSISFRRNFVFN--GPHGSLAFASGLKHQKNPLVQRVTTCNSAASK 64
           MASC+I CSS  QF SISFR+NF FN  G  GSLAFAS LK       QR  TCNS ASK
Sbjct: 1   MASCSILCSSQLQFHSISFRKNFAFNSHGSQGSLAFASRLKQ------QRAITCNSTASK 60

Query: 65  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHV 124
           QQFEIVYDPDERI+KLADEVDRDAPLSRLTLFSPCKINVFLRIT+KREDGYHDLASLFHV
Sbjct: 61  QQFEIVYDPDERISKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 125 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 184
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSD FFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDNFFWIHLDKKVP 180

Query: 185 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEV 244
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWS EIGSDIPFFFS+GAAFCTGRGEV
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSGEIGSDIPFFFSDGAAFCTGRGEV 240

Query: 245 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 304
           VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDP SLLDKITKNGISQDVCI
Sbjct: 241 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPSSLLDKITKNGISQDVCI 300

Query: 305 NDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQ 364
           NDLEPPAFEVLPSL+RLKQRIIS+SRG FDAVFMSGSGSTIVGIGSPDPPGFIY+D+EF+
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIISASRGGFDAVFMSGSGSTIVGIGSPDPPGFIYDDEEFR 360

Query: 365 DVFLAEANFLTREANQWYREPASASARSPPSEHPE 398
           DVFLAEANFLTRE N+WY+EPAS+SA SPPSEHPE
Sbjct: 361 DVFLAEANFLTREPNKWYQEPASSSACSPPSEHPE 389

[Close]

BLAST of Carg06137 vs. TAIR10
Match: AT2G26930.1 (4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase)

HSP 1 Score: 567.0 bits (1460), Expect = 9.2e-162
Identity = 269/347 (77.52%), Postives = 319/347 (91.93%), Query Frame = 0


Query: 49  LVQRVTTCNSAASKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEK 108
           L++ + + +  AS++Q EIV+DPDER+NK+ D+VD++APLSRL LFSPCKINVFLRIT K
Sbjct: 31  LLRPLLSFSVKASRKQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRITGK 90

Query: 109 REDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKT 168
           REDG+HDLASLFHVISLGDTIKFSLSPSK KDRLSTNV GVP+D RNLIIKALNLYRKKT
Sbjct: 91  REDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRKKT 150

Query: 169 GSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPF 228
           GS++FFWIHLDKKVPTGAGLGGGSSNAATALWAAN+ +G L TE +LQ+WSSEIGSDIPF
Sbjct: 151 GSNRFFWIHLDKKVPTGAGLGGGSSNAATALWAANELNGGLVTENELQDWSSEIGSDIPF 210

Query: 229 FFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSL 288
           FFS GAA+CTGRGE+VQ+LPPP PLD+PMVLIKP+EACSTAEVYKRLRLDQTS ++PL+L
Sbjct: 211 FFSHGAAYCTGRGEIVQDLPPPFPLDLPMVLIKPREACSTAEVYKRLRLDQTSNINPLTL 270

Query: 289 LDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIG 348
           L+ +T NG+SQ +C+NDLEPPAF VLPSL+RLKQRII+S RGE+DAVFMSGSGSTI+GIG
Sbjct: 271 LENVTSNGVSQSICVNDLEPPAFSVLPSLKRLKQRIIASGRGEYDAVFMSGSGSTIIGIG 330

Query: 349 SPDPPGFIYNDDEFQDVFLAEANFLTREANQWYREPASASARSPPSE 395
           SPDPP FIY+D+E+++VFL+EANF+TREAN+WY+EPASA+A +  +E
Sbjct: 331 SPDPPQFIYDDEEYKNVFLSEANFMTREANEWYKEPASANATTSSAE 377

[Close]

BLAST of Carg06137 vs. Swiss-Prot
Match: sp|P93841|ISPE_SOLLC (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (Fragment) OS=Solanum lycopersicum OX=4081 GN=ISPE PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 4.7e-163
Identity = 276/359 (76.88%), Postives = 320/359 (89.14%), Query Frame = 0


Query: 30  NGPHGSLAFASGLKHQKNPLVQRVTTCNSAASKQQFEIVYDPDERINKLADEVDRDAPLS 89
           N PHGS  F   ++ ++N  V  V    S  SK+Q EI Y+P+E+ NKLADEVDR+A LS
Sbjct: 29  NRPHGSSYFNKNIQFRRNSFV-IVKASGSRTSKKQVEITYNPEEKFNKLADEVDREAGLS 88

Query: 90  RLTLFSPCKINVFLRITEKREDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGV 149
           RLTLFSPCKINVFLRIT KR+DGYHDLASLFHVISLGD IKFSLSPSK KDRLSTNV+GV
Sbjct: 89  RLTLFSPCKINVFLRITSKRDDGYHDLASLFHVISLGDKIKFSLSPSKSKDRLSTNVAGV 148

Query: 150 PLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCL 209
           PLD+RNLIIKALNLYRKKTG+D +FWIHLDKKVPTGAGLGGGSSNAAT LWAANQFSGC+
Sbjct: 149 PLDERNLIIKALNLYRKKTGTDNYFWIHLDKKVPTGAGLGGGSSNAATTLWAANQFSGCV 208

Query: 210 ATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTA 269
           ATEK+LQEWS EIGSDIPFFFS GAA+CTGRGEVVQ++P P+P D+PMVLIKPQ+ACSTA
Sbjct: 209 ATEKELQEWSGEIGSDIPFFFSHGAAYCTGRGEVVQDIPSPIPFDIPMVLIKPQQACSTA 268

Query: 270 EVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSR 329
           EVYKR +LD +SKVDPLSLL+KI+ +GISQDVC+NDLEPPAFEVLPSL+RLKQR+I++ R
Sbjct: 269 EVYKRFQLDLSSKVDPLSLLEKISTSGISQDVCVNDLEPPAFEVLPSLKRLKQRVIAAGR 328

Query: 330 GEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQDVFLAEANFLTREANQWYREPASAS 388
           G++DAVFMSGSGSTIVG+GSPDPP F+Y+D+E++DVFL+EA+F+TR AN+WY EP S S
Sbjct: 329 GQYDAVFMSGSGSTIVGVGSPDPPQFVYDDEEYKDVFLSEASFITRPANEWYVEPVSGS 386

[Close]

BLAST of Carg06137 vs. Swiss-Prot
Match: sp|O81014|ISPE_ARATH (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPE PE=2 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 1.7e-160
Identity = 269/347 (77.52%), Postives = 319/347 (91.93%), Query Frame = 0


Query: 49  LVQRVTTCNSAASKQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEK 108
           L++ + + +  AS++Q EIV+DPDER+NK+ D+VD++APLSRL LFSPCKINVFLRIT K
Sbjct: 31  LLRPLLSFSVKASRKQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRITGK 90

Query: 109 REDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKT 168
           REDG+HDLASLFHVISLGDTIKFSLSPSK KDRLSTNV GVP+D RNLIIKALNLYRKKT
Sbjct: 91  REDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRKKT 150

Query: 169 GSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPF 228
           GS++FFWIHLDKKVPTGAGLGGGSSNAATALWAAN+ +G L TE +LQ+WSSEIGSDIPF
Sbjct: 151 GSNRFFWIHLDKKVPTGAGLGGGSSNAATALWAANELNGGLVTENELQDWSSEIGSDIPF 210

Query: 229 FFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSL 288
           FFS GAA+CTGRGE+VQ+LPPP PLD+PMVLIKP+EACSTAEVYKRLRLDQTS ++PL+L
Sbjct: 211 FFSHGAAYCTGRGEIVQDLPPPFPLDLPMVLIKPREACSTAEVYKRLRLDQTSNINPLTL 270

Query: 289 LDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIG 348
           L+ +T NG+SQ +C+NDLEPPAF VLPSL+RLKQRII+S RGE+DAVFMSGSGSTI+GIG
Sbjct: 271 LENVTSNGVSQSICVNDLEPPAFSVLPSLKRLKQRIIASGRGEYDAVFMSGSGSTIIGIG 330

Query: 349 SPDPPGFIYNDDEFQDVFLAEANFLTREANQWYREPASASARSPPSE 395
           SPDPP FIY+D+E+++VFL+EANF+TREAN+WY+EPASA+A +  +E
Sbjct: 331 SPDPPQFIYDDEEYKNVFLSEANFMTREANEWYKEPASANATTSSAE 377

[Close]

BLAST of Carg06137 vs. Swiss-Prot
Match: sp|P56848|ISPE_MENPI (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Mentha piperita OX=34256 GN=ISPE PE=1 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 7.5e-153
Identity = 259/355 (72.96%), Postives = 304/355 (85.63%), Query Frame = 0


Query: 32  PHGSLAFASGLKHQKNPLVQRVTTCNSAASKQQFEIVYDPDERINKLADEVDRDAPLSRL 91
           P+GS +F   L+  +  ++ R    +    + Q E+VYD + ++NKLADEVDR+A +SRL
Sbjct: 40  PNGSSSFRKKLQSSRIHII-RAAASDPTTGRNQLEVVYDLENKLNKLADEVDREAGISRL 99

Query: 92  TLFSPCKINVFLRITEKREDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGVPL 151
           TLFSPCKINVFLRIT KREDG+HDLASLFHVISLGD IKFSLSPSK      TNV GVPL
Sbjct: 100 TLFSPCKINVFLRITGKREDGFHDLASLFHVISLGDKIKFSLSPSKFNGSFVTNVPGVPL 159

Query: 152 DDRNLIIKALNLYRKKTGSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLAT 211
           D++NLIIKALNL+RKKTG+DK FWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGC+AT
Sbjct: 160 DEKNLIIKALNLFRKKTGTDKHFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCIAT 219

Query: 212 EKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTAEV 271
           EKDLQEWS EIGSDIPFFFS GAA+CTGRGEVV+++PPPVP D+ MVL+KPQEAC T EV
Sbjct: 220 EKDLQEWSGEIGSDIPFFFSHGAAYCTGRGEVVEDIPPPVPRDLSMVLMKPQEACPTGEV 279

Query: 272 YKRLRLDQTSKVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSRGE 331
           YKRLRLDQTS +DPL LL+KI+K GISQDVC+NDLEPPAFEV+PSL+RLKQRI ++ R +
Sbjct: 280 YKRLRLDQTSDIDPLVLLEKISKGGISQDVCVNDLEPPAFEVVPSLKRLKQRIAAAGRSQ 339

Query: 332 FDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQDVFLAEANFLTREANQWYREPAS 386
           +DAVFMSGSGSTIVG+GSPDPP F+Y+ DE++++F +EA F+TR ANQWY EP S
Sbjct: 340 YDAVFMSGSGSTIVGVGSPDPPQFVYDGDEYKNIFFSEAKFITRSANQWYSEPLS 393

[Close]

BLAST of Carg06137 vs. Swiss-Prot
Match: sp|Q8S2G0|ISPE_ORYSJ (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPE PE=2 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 7.7e-150
Identity = 252/339 (74.34%), Postives = 302/339 (89.09%), Query Frame = 0


Query: 62  KQQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFH 121
           ++Q E+ YD   + NKLAD++D++A ++RL LFSPCKINVFLRIT KR DG+HDLASLFH
Sbjct: 59  RRQVEVEYDLQAKFNKLADQIDQNAGITRLNLFSPCKINVFLRITGKRPDGFHDLASLFH 118

Query: 122 VISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKK 181
           VISLGDTIKFSLSPSK KDRLSTNV+GVP+D+ NLIIKALNLYRKKTG+D FFWIHLDKK
Sbjct: 119 VISLGDTIKFSLSPSKSKDRLSTNVAGVPVDESNLIIKALNLYRKKTGTDNFFWIHLDKK 178

Query: 182 VPTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRG 241
           VPTGAGLGGGSSNAATALWAANQFSGC+A+EK+LQEWS EIGSDIPFFFS+GAA+CTGRG
Sbjct: 179 VPTGAGLGGGSSNAATALWAANQFSGCIASEKELQEWSGEIGSDIPFFFSQGAAYCTGRG 238

Query: 242 EVVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDV 301
           E+V+++  P+P ++PMVL+KP EACSTAEVYKRLRL+ TS+ DPL LL +IT+NGISQD 
Sbjct: 239 EIVEDIRNPLPANLPMVLVKPPEACSTAEVYKRLRLEHTSQTDPLVLLKEITENGISQDA 298

Query: 302 CINDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDE 361
           C+NDLEPPAFEVLPSL+RLK+RII+++RG++DAVFMSGSGSTIVGIGSPDPP F+Y+DD+
Sbjct: 299 CVNDLEPPAFEVLPSLKRLKKRIIAANRGDYDAVFMSGSGSTIVGIGSPDPPAFVYDDDD 358

Query: 362 FQDVFLAEANFLTREANQWYREPASASARSPPSEHPELA 400
           ++D F++EA FLTR  N+WYREP S+   S     PE+A
Sbjct: 359 YKDTFVSEACFLTRNENEWYREPISSKITSEEDLPPEVA 397

[Close]

BLAST of Carg06137 vs. Swiss-Prot
Match: sp|Q6MAT6|ISPE_PARUW (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=ispE PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.7e-60
Identity = 129/290 (44.48%), Postives = 169/290 (58.28%), Query Frame = 0


Query: 91  LTLFSPCKINVFLRITEKREDGYHDLASLFHVISLGDTIKFSLSPSKKDRLSTNVSGVPL 150
           + LFSP KIN+FL++  KR DGYH+L+SLF  IS GD + F       D L+ +   +P 
Sbjct: 15  IRLFSPAKINLFLKVIGKRADGYHELSSLFQTISAGDILTFQRQTI--DTLTCSDPYLPT 74

Query: 151 DDRNLIIKALNLYRKKTGSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLAT 210
           DD NL++KA+ L+R KTG D    IHLDK++P+ AGLGGGSSNAAT LWA NQ +G + T
Sbjct: 75  DDSNLVLKAMRLFRSKTGLDLHLRIHLDKRLPSQAGLGGGSSNAATTLWACNQLAGEIVT 134

Query: 211 EKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTAEV 270
            ++L +W SEIG+DIPFFFS+G A CTGRGE V +L P     +   ++KP    ST EV
Sbjct: 135 TEELMQWGSEIGADIPFFFSKGTAHCTGRGECVNSLEPLAHCKI--WIVKPPFGLSTPEV 194

Query: 271 YKRLRLDQTSKVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSRGE 330
           YK L   Q ++       +        +    NDLE  AFE+ P L+ LK  ++SS    
Sbjct: 195 YKHLNFSQPNE-------NNNDYASFKEKPYFNDLEASAFEIKPELKILKNTLLSSG--- 254

Query: 331 FDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQDVFLAEANFLTREANQWY 381
           FD V MSGSGS+   IG    P                A F+ R +N+WY
Sbjct: 255 FDTVLMSGSGSSFFCIGQGQIPA---------SFKAFSAYFINRSSNRWY 281

[Close]

BLAST of Carg06137 vs. TrEMBL
Match: tr|A0A1S3BQ16|A0A1S3BQ16_CUCME (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492448 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 3.7e-205
Identity = 361/395 (91.39%), Postives = 374/395 (94.68%), Query Frame = 0


Query: 5   MASCNIPCSSGFQFRSISFRRNFVFN--GPHGSLAFASGLKHQKNPLVQRVTTCNSAASK 64
           MASC+IPCSS  QF SISFR+NF FN  G HGSLAFAS LK QK        TCNS ASK
Sbjct: 1   MASCSIPCSSQLQFHSISFRKNFAFNSHGSHGSLAFASRLKQQK------AITCNSTASK 60

Query: 65  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHV 124
           QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRIT+KREDGYHDLASLFHV
Sbjct: 61  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 125 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 184
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 180

Query: 185 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEV 244
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWS EIGSDIPFFFS+GAAFCTGRGE+
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSGEIGSDIPFFFSDGAAFCTGRGEI 240

Query: 245 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 304
           VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI
Sbjct: 241 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 300

Query: 305 NDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQ 364
           NDLEPPAFEVLPSL+RLKQRIIS+SRGEFDAVFMSGSGSTIVGIGSPDPPGFIY+D+EF+
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIISASRGEFDAVFMSGSGSTIVGIGSPDPPGFIYDDEEFR 360

Query: 365 DVFLAEANFLTREANQWYREPASASARSPPSEHPE 398
           DVFLAEANFLTRE N+WY+EPAS+SA SPPSEHPE
Sbjct: 361 DVFLAEANFLTREPNKWYQEPASSSACSPPSEHPE 389

[Close]

BLAST of Carg06137 vs. TrEMBL
Match: tr|A0A0A0LZC4|A0A0A0LZC4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600780 PE=3 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 1.6e-200
Identity = 356/395 (90.13%), Postives = 369/395 (93.42%), Query Frame = 0


Query: 5   MASCNIPCSSGFQFRSISFRRNFVFN--GPHGSLAFASGLKHQKNPLVQRVTTCNSAASK 64
           MASC+I CSS  QF SISFR+NF FN  G  GSLAFAS LK       QR  TCNS ASK
Sbjct: 1   MASCSILCSSQLQFHSISFRKNFAFNSHGSQGSLAFASRLKQ------QRAITCNSTASK 60

Query: 65  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHV 124
           QQFEIVYDPDERI+KLADEVDRDAPLSRLTLFSPCKINVFLRIT+KREDGYHDLASLFHV
Sbjct: 61  QQFEIVYDPDERISKLADEVDRDAPLSRLTLFSPCKINVFLRITKKREDGYHDLASLFHV 120

Query: 125 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKVP 184
           ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSD FFWIHLDKKVP
Sbjct: 121 ISLGDTIKFSLSPSKKDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDNFFWIHLDKKVP 180

Query: 185 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEV 244
           TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWS EIGSDIPFFFS+GAAFCTGRGEV
Sbjct: 181 TGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSGEIGSDIPFFFSDGAAFCTGRGEV 240

Query: 245 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVCI 304
           VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDP SLLDKITKNGISQDVCI
Sbjct: 241 VQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPSSLLDKITKNGISQDVCI 300

Query: 305 NDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQ 364
           NDLEPPAFEVLPSL+RLKQRIIS+SRG FDAVFMSGSGSTIVGIGSPDPPGFIY+D+EF+
Sbjct: 301 NDLEPPAFEVLPSLKRLKQRIISASRGGFDAVFMSGSGSTIVGIGSPDPPGFIYDDEEFR 360

Query: 365 DVFLAEANFLTREANQWYREPASASARSPPSEHPE 398
           DVFLAEANFLTRE N+WY+EPAS+SA SPPSEHPE
Sbjct: 361 DVFLAEANFLTREPNKWYQEPASSSACSPPSEHPE 389

[Close]

BLAST of Carg06137 vs. TrEMBL
Match: tr|A0A2P4L0Y1|A0A2P4L0Y1_QUESU (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, chloroplastic/chromoplastic OS=Quercus suber OX=58331 GN=CFP56_40153 PE=3 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 5.0e-170
Identity = 292/363 (80.44%), Postives = 338/363 (93.11%), Query Frame = 0


Query: 32  PHGSLAFASGLKHQKNPLVQRVTTCNSAASKQQFEIVYDPDERINKLADEVDRDAPLSRL 91
           P+GS +F S  + ++   ++ + + ++  ++++ E+VY+P+ERINKLADEVD++APLSRL
Sbjct: 38  PNGSSSFHSNSQFKR---IRAMASDSNTPTRRKVEVVYNPEERINKLADEVDKEAPLSRL 97

Query: 92  TLFSPCKINVFLRITEKREDGYHDLASLFHVISLGDTIKFSLSPSK-KDRLSTNVSGVPL 151
           TLFSPCK+NVFLRIT KREDG+HDLASLFHVISLGD +KFSLSPSK KD LSTNVSGVPL
Sbjct: 98  TLFSPCKVNVFLRITNKREDGFHDLASLFHVISLGDILKFSLSPSKTKDSLSTNVSGVPL 157

Query: 152 DDRNLIIKALNLYRKKTGSDKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCLAT 211
           DDRNLIIKALNLYRKKTGS+KFFWIHLDKKVPTGAGLGGGSSNAATALWAANQF+GCLAT
Sbjct: 158 DDRNLIIKALNLYRKKTGSEKFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFNGCLAT 217

Query: 212 EKDLQEWSSEIGSDIPFFFSEGAAFCTGRGEVVQNLPPPVPLDVPMVLIKPQEACSTAEV 271
           EK+LQEWSSEIGSD+PFFFS+GAA+CTGRGEVVQN+PPPVPLD+PMVLIKPQ+ACSTAEV
Sbjct: 218 EKELQEWSSEIGSDVPFFFSQGAAYCTGRGEVVQNIPPPVPLDIPMVLIKPQQACSTAEV 277

Query: 272 YKRLRLDQTSKVDPLSLLDKITKNGISQDVCINDLEPPAFEVLPSLRRLKQRIISSSRGE 331
           YKRLRLDQTSKVDPL+LL+KI+ NGISQDVCINDLEPPAFEVLPSLRRLKQR+ ++SRG+
Sbjct: 278 YKRLRLDQTSKVDPLTLLEKISTNGISQDVCINDLEPPAFEVLPSLRRLKQRVNAASRGQ 337

Query: 332 FDAVFMSGSGSTIVGIGSPDPPGFIYNDDEFQDVFLAEANFLTREANQWYREPASASARS 391
           +DAVFMSGSGSTIVGIGSPDPP F+Y+D+E+ DVFL+EANFLTREANQWYREPAS SA +
Sbjct: 338 YDAVFMSGSGSTIVGIGSPDPPQFVYDDEEYNDVFLSEANFLTREANQWYREPASTSAST 397

Query: 392 PPS 394
            PS
Sbjct: 398 SPS 397

[Close]

BLAST of Carg06137 vs. TrEMBL
Match: tr|A0A0L9VJA8|A0A0L9VJA8_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g071100 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.1e-169
Identity = 310/384 (80.73%), Postives = 340/384 (88.54%), Query Frame = 0


Query: 5   MASCNIPCSS-GFQFRSISFR-RNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAASK 64
           MA+ ++ CSS  F     SFR  +F    P+GS  F S L+ Q+  LV R    +S  SK
Sbjct: 1   MAASHLLCSSYVFPTSQNSFRSSHFSQFRPNGSSTFHSKLRFQRPHLV-RAMVSDSNTSK 60

Query: 65  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHV 124
           +Q EIVYDP+ RINKLADEVDR+APLSRLTLFSPCKINVFLRIT KREDGYHDLASLFHV
Sbjct: 61  RQVEIVYDPEARINKLADEVDREAPLSRLTLFSPCKINVFLRITNKREDGYHDLASLFHV 120

Query: 125 ISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKV 184
           ISLGD IKFSLSPSK KD LSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDK+V
Sbjct: 121 ISLGDIIKFSLSPSKTKDSLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKRV 180

Query: 185 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGE 244
           PTGAGLGGGSSNAATALWAANQFSGCLA+EK+LQEWSSEIGSDIPFFFS+GAA+CTGRGE
Sbjct: 181 PTGAGLGGGSSNAATALWAANQFSGCLASEKELQEWSSEIGSDIPFFFSQGAAYCTGRGE 240

Query: 245 VVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVC 304
           VVQN+PPPV LDVPMVLIKP EACSTAEVYKRLRLDQTS VDPL+LLDKI+K GISQDVC
Sbjct: 241 VVQNIPPPVSLDVPMVLIKPPEACSTAEVYKRLRLDQTSNVDPLTLLDKISKIGISQDVC 300

Query: 305 INDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEF 364
           INDLEPPAFEVLPSL+RLKQRI ++ RGE+ AVFMSGSGSTIVGIGSPDPP F+Y+DDE+
Sbjct: 301 INDLEPPAFEVLPSLKRLKQRISAAGRGEYGAVFMSGSGSTIVGIGSPDPPQFVYDDDEY 360

Query: 365 QDVFLAEANFLTREANQWYREPAS 386
           +DVFL++A FLTREANQWY+EPAS
Sbjct: 361 KDVFLSDAYFLTREANQWYQEPAS 383

[Close]

BLAST of Carg06137 vs. TrEMBL
Match: tr|A0A0S3S796|A0A0S3S796_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G222100 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.1e-169
Identity = 310/384 (80.73%), Postives = 340/384 (88.54%), Query Frame = 0


Query: 5   MASCNIPCSS-GFQFRSISFR-RNFVFNGPHGSLAFASGLKHQKNPLVQRVTTCNSAASK 64
           MA+ ++ CSS  F     SFR  +F    P+GS  F S L+ Q+  LV R    +S  SK
Sbjct: 1   MAASHLLCSSYVFPTSQNSFRSSHFSQFRPNGSSTFHSKLRFQRPHLV-RAMVSDSNTSK 60

Query: 65  QQFEIVYDPDERINKLADEVDRDAPLSRLTLFSPCKINVFLRITEKREDGYHDLASLFHV 124
           +Q EIVYDP+ RINKLADEVDR+APLSRLTLFSPCKINVFLRIT KREDGYHDLASLFHV
Sbjct: 61  RQVEIVYDPEARINKLADEVDREAPLSRLTLFSPCKINVFLRITNKREDGYHDLASLFHV 120

Query: 125 ISLGDTIKFSLSPSK-KDRLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKKV 184
           ISLGD IKFSLSPSK KD LSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDK+V
Sbjct: 121 ISLGDIIKFSLSPSKTKDSLSTNVSGVPLDDRNLIIKALNLYRKKTGSDKFFWIHLDKRV 180

Query: 185 PTGAGLGGGSSNAATALWAANQFSGCLATEKDLQEWSSEIGSDIPFFFSEGAAFCTGRGE 244
           PTGAGLGGGSSNAATALWAANQFSGCLA+EK+LQEWSSEIGSDIPFFFS+GAA+CTGRGE
Sbjct: 181 PTGAGLGGGSSNAATALWAANQFSGCLASEKELQEWSSEIGSDIPFFFSQGAAYCTGRGE 240

Query: 245 VVQNLPPPVPLDVPMVLIKPQEACSTAEVYKRLRLDQTSKVDPLSLLDKITKNGISQDVC 304
           VVQN+PPPV LDVPMVLIKP EACSTAEVYKRLRLDQTS VDPL+LLDKI+K GISQDVC
Sbjct: 241 VVQNIPPPVSLDVPMVLIKPPEACSTAEVYKRLRLDQTSNVDPLTLLDKISKIGISQDVC 300

Query: 305 INDLEPPAFEVLPSLRRLKQRIISSSRGEFDAVFMSGSGSTIVGIGSPDPPGFIYNDDEF 364
           INDLEPPAFEVLPSL+RLKQRI ++ RGE+ AVFMSGSGSTIVGIGSPDPP F+Y+DDE+
Sbjct: 301 INDLEPPAFEVLPSLKRLKQRISAAGRGEYGAVFMSGSGSTIVGIGSPDPPQFVYDDDEY 360

Query: 365 QDVFLAEANFLTREANQWYREPAS 386
           +DVFL++A FLTREANQWY+EPAS
Sbjct: 361 KDVFLSDAYFLTREANQWYQEPAS 383

The following BLAST results are available for this feature:

BLAST of Carg06137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960704.1	8.5e-230	99.75	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [Cucurbita...	[more]
XP_023515762.1	1.2e-228	99.00	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Cucurbita pepo...	[more]
XP_022988144.1	6.3e-225	97.75	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like [Cucurbita...	[more]
XP_008451044.1	5.5e-205	91.39	PREDICTED: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isof...	[more]
XP_004144086.1	2.4e-200	90.13	PREDICTED: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Cuc...	[more]

BLAST of Carg06137 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26930.1	9.2e-162	77.52	4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase	[more]

BLAST of Carg06137 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93841\|ISPE_SOLLC	4.7e-163	76.88	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (...	[more]
sp\|O81014\|ISPE_ARATH	1.7e-160	77.52	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Arabidopsis ...	[more]
sp\|P56848\|ISPE_MENPI	7.5e-153	72.96	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Mentha piper...	[more]
sp\|Q8S2G0\|ISPE_ORYSJ	7.7e-150	74.34	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa...	[more]
sp\|Q6MAT6\|ISPE_PARUW	5.7e-60	44.48	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Protochlamydia amoebophila ...	[more]

BLAST of Carg06137 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQ16\|A0A1S3BQ16_CUCME	3.7e-205	91.39	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isoform X1 OS=C...	[more]
tr\|A0A0A0LZC4\|A0A0A0LZC4_CUCSA	1.6e-200	90.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600780 PE=3 SV=1	[more]
tr\|A0A2P4L0Y1\|A0A2P4L0Y1_QUESU	5.0e-170	80.44	4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, chloroplastic/chromoplastic O...	[more]
tr\|A0A0L9VJA8\|A0A0L9VJA8_PHAAN	1.1e-169	80.73	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g071100 PE...	[more]
tr\|A0A0S3S796\|A0A0S3S796_PHAAN	1.1e-169	80.73	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0050515	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016114	terpenoid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR020568	Ribosomal_S5_D2-typ_fold
IPR006204	GHMP_kinase_N_dom
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR004424	IspE
IPR036554	GHMP_kinase_C_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050515	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06137-RA	Carg06137-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036554	GHMP kinase, C-terminal domain superfamily	GENE3D	G3DSA:3.30.70.890		coord: 253..350 e-value: 2.2E-18 score: 68.4
IPR036554	GHMP kinase, C-terminal domain superfamily	SUPERFAMILY	SSF55060	GHMP Kinase, C-terminal domain	coord: 253..348
IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	TIGRFAM	TIGR00154	TIGR00154	coord: 91..344 e-value: 8.6E-58 score: 194.2
IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	HAMAP	MF_00061	IspE	coord: 91..386 score: 27.248
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 75..246 e-value: 5.9E-53 score: 180.8
IPR006204	GHMP kinase N-terminal domain	PFAM	PF00288	GHMP_kinases_N	coord: 175..228 e-value: 1.7E-6 score: 28.0
None	No IPR available	PANTHER	PTHR43527	FAMILY NOT NAMED	coord: 87..387
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	SSF54211	Ribosomal protein S5 domain 2-like	coord: 91..244

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06137	Cla011088	Watermelon (97103) v1	carwmB0018
Carg06137	Csa1G600780	Cucumber (Chinese Long) v2	carcuB0015
Carg06137	MELO3C015605	Melon (DHL92) v3.5.1	carmeB0019
Carg06137	ClCG03G014320	Watermelon (Charleston Gray)	carwcgB0024
Carg06137	CSPI01G29480	Wild cucumber (PI 183967)	carcpiB0015
Carg06137	Cucsa.142530	Cucumber (Gy14) v1	carcgyB0020
Carg06137	CmaCh11G007960	Cucurbita maxima (Rimu)	carcmaB0027
Carg06137	CmaCh10G009930	Cucurbita maxima (Rimu)	carcmaB0026
Carg06137	CmoCh10G010460	Cucurbita moschata (Rifu)	carcmoB0027
Carg06137	CmoCh11G008030	Cucurbita moschata (Rifu)	carcmoB0028
Carg06137	Lsi06G004190	Bottle gourd (USVL1VR-Ls)	carlsiB021
Carg06137	Cp4.1LG18g01120	Cucurbita pepo (Zucchini)	carcpeB0033
Carg06137	CsGy1G028750	Cucumber (Gy14) v2	carcgybB0014
Carg06137	MELO3C015605.2	Melon (DHL92) v3.6.1	carmedB0020
Carg06137	CsaV3_1G041900	Cucumber (Chinese Long) v3	carcucB0015
Carg06137	Cla97C03G064510	Watermelon (97103) v2	carwmbB0020
Carg06137	Bhi02G001431	Wax gourd	carwgoB0027

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06137	Carg18023	Silver-seed gourd	carcarB017

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06137	Cucurbita pepo (Zucchini)	carcpeB0037