Carg17993 (gene) Silver-seed gourd

Overview
NameCarg17993
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger CCCH domain-containing protein
LocationCucurbita_argyrosperma_scaffold_171 : 199906 .. 202575 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCTGACGGTGTTCGCAAGAGGGAGAGAGCTGAAACCGCCTTGAATGGCAATGGGGCCTTTAAGAAGTCCAAACCAGGTTCGTTTTGCTTCATAAATGCTCCTCTTGGGCTTTTTTTGGGCGTTCTCAACGGTTTTGGTATTTTCTCGTTCAGCTGGTTCATGGGTTTGTTGGTGGCTTTTGTTTCCCTTGCTTGTAGTTGTAGCATGTGTATGCTGAAGTCCGTTTTGTTTGATTTCTGTTCGTTTTTACTACTATTGATAGTTTTGATGGACTTGTTATTTACTCTCGGGTATTGCTGTTCTTTTGTATACGCTCTAGCTAGAAGAAACTTGGAAGCTTATTCTAGAACAAATCTGAATAAATGAACACAAATTGTTGCCTTTTACCCTACCATGTAGCTTGTTCTTCGTTTGAATATATAGATGTAGGTATAGTCTTTTAGTATCCTTACTTGTTTTTTGGTTAATGATTCTAATATCATGTTCTAAGTTGTAGTATTTGAAACTACTGTTTATGGCTTCAACTGATGTCGATTTCACATCCTTTGCTTGGATGTTGGAACATAAAAAGTACATCACTCCCTATTGTCTTTGTTTTTGTTGATAGTTTTTCAAAATGGGATGTGGGTGTCTTTTGATTCCTCCTGCTGGCCGTTTTCACCGCATTAATTAATAGTGTGTTGTGTTAGCCATAAAAGATGTTAGAACAATTTGAGATATTTTAAGCTGGGAGATCAATAATTGGGTGAAATTTGAACTAAGGAAAGTTAATTAATGTTGTGCGACAGAATTGGACTCCTTATCTACTGGTTTAGGAAGCAAATCGAGGCCTTGCACAAAGTTTTTCAGGTTCAAATCTTAACTTATCTAAAATGAATTAATATAATGCCACTCAATCTATTGCTAACATCCTTTAATTTCCAGAAAGATTTACTTAATTTTCTCAAGCAAAATTATTGTTCTTTGGACTAATGAATTGGTTAGTTAAAGTTGTTTCAGGTTATGCAATGATGTAATCATAACAACAATCACTGAACTGAAATAGTTGATTCACAACAGTTCAGTGGGAATGTCTAAATTGAAAGCACTTTTGTATTGGATGCAAACTTGTTCTCTCTTAAGTGGATAATTAGTTCTTACTTGGATATTTTCAAGTAAGCAGTTTGATGCAGAATTGAATTGGCATTTAGGTTTTGATCAAAGAATTAAAAGTTATGGTAAATCATGTTCTATTTGTTCGCTTTCTTTTTTGCCTACCTCTATCCCGATAAGCTGAAGCCAAGACCTTCTCTTGAATTCTCAAAACTTCTTTCGCTCCATCCCCATGGGGGTAAACCAGAAATGTTTGGATAGAGCCGGATCTAAATGTTGGCTAAACGAATTATTGCTTGTGTCATAAAGACCTTTATGTCCACGCCCCAATCGTGCTCAAACAAGAGAAGGAAACAAACATAAAATTCTTGAGATATTACAATAGGTTAGCTATCACATGAGCCACATTTCCATTTTTTTTATTTTAATTATATATGTATATATGAAAATCTGTAAATGTTATGCTAATTTTCCGTCTAGTTCATATGAAATTATTTTGTTGAACGATAGTTAAGCCCGGTTTAAGATTTCGGTTTCTTTTCCTGTTAAGGATTTTGGACATTACAATTTTCTGATACGGTAGTTCAACTTGTTTCTGTTGCCAAGTTGAAGAGTTGTCTTGAAATTTGATATCTTTGTCTGTTTTGGAGTAGAGTTATTGTGATCTTTACTTTGGTTGTTTATGCTCAAGAATCTTCATCGGTTTTTTGTTGGTTTCGTTAGATTTTGTATGAGTTTCGACTAGTATTCTAGATCGGGTTGCTATGGTGAAGTTTACTCGTCTTTTTGAAATAAAAATGCAGCACTTCTGGTTGTCCTTTTGGTGAGGGGTGTCATTTTGCACATTATGTTCCTGGTGGATTCAAAGCAATTTCTCAGATGAACAGTCCTGCTATTTCCCCTGGCATTAGAAATCCTGTCGCCCCTCCATCGTTTCCAGATGGTGTTTCTCCTCCGGCACTCAAGACACGTTTGTGCAACAAATTCAACTCAGCCGAAGGCTGCAGATTCGGTGACAAATGCCATTTTGCTCATGGCGAGTGGGACCTTGGAAGGCCAAATCCTCCACCAGAATACGGTGGAATGGGTGGAGGACCACTAGGACAACAACCCAGAATGGGTGGTGGTTGGAATGTGCCTCCGCCACAACCCAACCATGGACCTGCTGCTAGCTTCGGTGCGTCTGCAACAGCAAAGATTAGCGTCGATGCATCGCTTGCTGGTCCCATAATTGGGAAGAATGGTGTCAACTCGAAGAATATCTGTCGAATGACAGGAGCAAGACTTTCTATAAAAGATCATGAGTCTGACTCTAGCTTGAAGAACATTGAGCTCGAGGGTACGTTTGATCAGATCAATCTTGCTAGTTCAATGGTGCGCGAGTTGATTGCAAACGTCGGCGCAGCCTCTGCCAATAATGCCATGAGGCAGCAGCAGCAGCAGCATTCTCAGCACTCAGCAAACAACTTCAAGACCAAGCTTTGTGCTAATTTTGCAAAGGGTACTTGTACGTTTAGAGAAAGATGCCATTTTGCACATGGCGAAAGTGAATTGCGGAAACCAGGTATGTGA

mRNA sequence

ATGGACCCTGACGGTGTTCGCAAGAGGGAGAGAGCTGAAACCGCCTTGAATGGCAATGGGGCCTTTAAGAAGTCCAAACCAGAATTGGACTCCTTATCTACTGGTTTAGGAAGCAAATCGAGGCCTTGCACAAAGTTTTTCAGCACTTCTGGTTGTCCTTTTGGTGAGGGGTGTCATTTTGCACATTATGTTCCTGGTGGATTCAAAGCAATTTCTCAGATGAACAGTCCTGCTATTTCCCCTGGCATTAGAAATCCTGTCGCCCCTCCATCGTTTCCAGATGGTGTTTCTCCTCCGGCACTCAAGACACGTTTGTGCAACAAATTCAACTCAGCCGAAGGCTGCAGATTCGGTGACAAATGCCATTTTGCTCATGGCGAGTGGGACCTTGGAAGGCCAAATCCTCCACCAGAATACGGTGGAATGGGTGGAGGACCACTAGGACAACAACCCAGAATGGGTGGTGGTTGGAATGTGCCTCCGCCACAACCCAACCATGGACCTGCTGCTAGCTTCGGTGCGTCTGCAACAGCAAAGATTAGCGTCGATGCATCGCTTGCTGGTCCCATAATTGGGAAGAATGGTGTCAACTCGAAGAATATCTGTCGAATGACAGGAGCAAGACTTTCTATAAAAGATCATGAGTCTGACTCTAGCTTGAAGAACATTGAGCTCGAGGGTACGTTTGATCAGATCAATCTTGCTAGTTCAATGGTGCGCGAGTTGATTGCAAACGTCGGCGCAGCCTCTGCCAATAATGCCATGAGGCAGCAGCAGCAGCAGCATTCTCAGCACTCAGCAAACAACTTCAAGACCAAGCTTTGTGCTAATTTTGCAAAGGGTACTTGTACGTTTAGAGAAAGATGCCATTTTGCACATGGCGAAAGTGAATTGCGGAAACCAGGTATGTGA

Coding sequence (CDS)

ATGGACCCTGACGGTGTTCGCAAGAGGGAGAGAGCTGAAACCGCCTTGAATGGCAATGGGGCCTTTAAGAAGTCCAAACCAGAATTGGACTCCTTATCTACTGGTTTAGGAAGCAAATCGAGGCCTTGCACAAAGTTTTTCAGCACTTCTGGTTGTCCTTTTGGTGAGGGGTGTCATTTTGCACATTATGTTCCTGGTGGATTCAAAGCAATTTCTCAGATGAACAGTCCTGCTATTTCCCCTGGCATTAGAAATCCTGTCGCCCCTCCATCGTTTCCAGATGGTGTTTCTCCTCCGGCACTCAAGACACGTTTGTGCAACAAATTCAACTCAGCCGAAGGCTGCAGATTCGGTGACAAATGCCATTTTGCTCATGGCGAGTGGGACCTTGGAAGGCCAAATCCTCCACCAGAATACGGTGGAATGGGTGGAGGACCACTAGGACAACAACCCAGAATGGGTGGTGGTTGGAATGTGCCTCCGCCACAACCCAACCATGGACCTGCTGCTAGCTTCGGTGCGTCTGCAACAGCAAAGATTAGCGTCGATGCATCGCTTGCTGGTCCCATAATTGGGAAGAATGGTGTCAACTCGAAGAATATCTGTCGAATGACAGGAGCAAGACTTTCTATAAAAGATCATGAGTCTGACTCTAGCTTGAAGAACATTGAGCTCGAGGGTACGTTTGATCAGATCAATCTTGCTAGTTCAATGGTGCGCGAGTTGATTGCAAACGTCGGCGCAGCCTCTGCCAATAATGCCATGAGGCAGCAGCAGCAGCAGCATTCTCAGCACTCAGCAAACAACTTCAAGACCAAGCTTTGTGCTAATTTTGCAAAGGGTACTTGTACGTTTAGAGAAAGATGCCATTTTGCACATGGCGAAAGTGAATTGCGGAAACCAGGTATGTGA

Protein sequence

MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELIANVGAASANNAMRQQQQQHSQHSANNFKTKLCANFAKGTCTFRERCHFAHGESELRKPGM
Homology
[Close]
BLAST of Carg17993 vs. NCBI nr
Match: XP_022933588.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata])

HSP 1 Score: 578.6 bits (1490), Expect = 1.3e-161
Identity = 300/303 (99.01%), Postives = 303/303 (100.00%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MDPDGVRKRERAETALNGNGAFKKSKPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDPDGVRKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           CHFAHGEWDLGRPNPPPE+GGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI
Sbjct: 121 CHFAHGEWDLGRPNPPPEHGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           ELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 ELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 303

[Close]
BLAST of Carg17993 vs. NCBI nr
Match: XP_023531374.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.1 bits (1468), Expect = 4.5e-159
Identity = 287/303 (94.72%), Postives = 290/303 (95.71%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MDPDGVRKRERAETALNGNGAFKKSKPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDPDGVRKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           CHFAHGEWDLGRPNPPPE+GGMGGGPL QQPRMGGGWNVPPPQPNHGPAASFGASATAKI
Sbjct: 121 CHFAHGEWDLGRPNPPPEHGGMGGGPLAQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           ELIANVGAAS        XXXXXXX   NFKTKLCANFAKG CTFRERCHFAHGESELRK
Sbjct: 241 ELIANVGAAS-ANNAMRQXXXXXXXSANNFKTKLCANFAKGNCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 302

[Close]
BLAST of Carg17993 vs. NCBI nr
Match: XP_022967901.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima])

HSP 1 Score: 552.0 bits (1421), Expect = 1.3e-153
Identity = 273/304 (89.80%), Postives = 277/304 (91.12%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MDPDGV KRERAETALNGNGAFKKSKPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDPDGVHKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMNSPAI  GIRNPV PP FPDGVSPPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAILTGIRNPVGPPPFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           CHFAHGEWDLGRPNPPPE+GGM GGPL QQPRMGGGWNVPPPQPNHGPAASFGASATAKI
Sbjct: 121 CHFAHGEWDLGRPNPPPEHGGM-GGPLAQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAAS-XXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELR 300
           ELIAN+G AS                   NFKTKLCANFAKGTCTFRERCHFAHGESELR
Sbjct: 241 ELIANMGTASANDAMRQQQHSQHHSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 300

Query: 301 KPGM 304
           KPGM
Sbjct: 301 KPGM 303

[Close]
BLAST of Carg17993 vs. NCBI nr
Match: XP_023516879.1 (zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516880.1 zinc finger CCCH domain-containing protein 14-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.0 bits (1312), Expect = 5.6e-141
Identity = 257/305 (84.26%), Postives = 266/305 (87.21%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRER ETA NGNG+FKK KPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETAFNGNGSFKKLKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQM +PA+ PG RNPV P SF DGVSPPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           CHFAHGEW+LGRPNPP ++GGMG     QQPRMGGGWNVPPP PNHGPAASFGASATAKI
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG---QMQQPRMGGGWNVPPP-PNHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNGVNSKNICRMTGARLSIK+HESD SLKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAAS--XXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESEL 300
           ELIANVGAAS                    NFKTKLCANFAKGTCTFRERCHFAHGESEL
Sbjct: 241 ELIANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESEL 300

Query: 301 RKPGM 304
           RKPGM
Sbjct: 301 RKPGM 301

[Close]
BLAST of Carg17993 vs. NCBI nr
Match: XP_022988178.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima])

HSP 1 Score: 501.1 bits (1289), Expect = 2.6e-138
Identity = 253/305 (82.95%), Postives = 262/305 (85.90%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRER ETALNGNG+FKK KPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQM +PA+ PG RNPV P SF DGVSPPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           CHFAHGEW+LGRPNPP ++GGMG     QQPRMGGGWNV      HGPAASFGASATAKI
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG---QMQQPRMGGGWNVXXXXXXHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNGVNSKNICRMTGARLSIK+HESD SLKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAAS--XXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESEL 300
           ELIANVGAAS                    NFKTKLCANFAKGTCTFRERCHFAHGESEL
Sbjct: 241 ELIANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESEL 300

Query: 301 RKPGM 304
           RKPGM
Sbjct: 301 RKPGM 302

[Close]
BLAST of Carg17993 vs. TAIR10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-61
Identity = 142/299 (47.49%), Postives = 173/299 (57.86%), Query Frame = 0 

Query: 7   RKRERAETAL--NGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E A   N NG FK+SK E++S+STGLGSKS+PCTKFFSTSGCPFG+ CHF HYV
Sbjct: 4   RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63

Query: 67  PGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFA 126
           PGG+ A +QM +      +R PV+  S                   + +G          
Sbjct: 64  PGGYNAAAQMTN------LRPPVSQVS------------------RNMQG---------- 123

Query: 127 HGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKISVDA 186
                              GGP G+    G         P  GP + FGAS T+KISVDA
Sbjct: 124 ------------------SGGPGGRFSGRG--------DPGSGPVSIFGAS-TSKISVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK G++SK ICR TGA+LSIKDHE D +LK IELEGTF+QIN+AS MVRELI 
Sbjct: 184 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 247 NVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRKPGM 304
            +G  S                  N+KTK+C  ++KG CT+ +RCHFAHGESELR+ G+
Sbjct: 244 RLG--SVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]
BLAST of Carg17993 vs. TAIR10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 219.2 bits (557), Expect = 3.6e-57
Identity = 144/305 (47.21%), Postives = 174/305 (57.05%), Query Frame = 0 

Query: 7   RKRERAET-ALNGN-GAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E  + N N G +KKSK E++S STGLGSKS+PCTKFFSTSGCPFGE CHF HYV
Sbjct: 4   RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63

Query: 67  PGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFA 126
           PGG+ A+SQM +                   + PP  +    N   S  G RF  +    
Sbjct: 64  PGGYNAVSQMTN-------------------MGPPIPQVSR-NMQGSGNGGRFSGR---- 123

Query: 127 HGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKISVDA 186
            GE                 GP                    G  ++FG SATA+ SVDA
Sbjct: 124 -GE----------------SGP--------------------GHVSNFGDSATARFSVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK GV+SK ICR TG +LSI+DHE D +LKNI LEGT +QI+ AS+MV++LI 
Sbjct: 184 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 243

Query: 247 NVGA------ASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESEL 304
            + +        XXXXXXX           NFKTK+C  F+KG CTF +RCHFAHGE+EL
Sbjct: 244 RLNSXXXXXXXXXXXXXXXMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAEL 247

[Close]
BLAST of Carg17993 vs. TAIR10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-08
Identity = 50/158 (31.65%), Postives = 68/158 (43.04%), Query Frame = 0 

Query: 15  ALNGNGAFKKSKPELDSLSTGLGS---KSRPCTKFFSTSGCPF-GEGCHFAH-------- 74
           A+N +GA   SK    S S+ +G    K++ C K F    CP+    CHFAH        
Sbjct: 46  AINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFK-FRAGTCPYSASSCHFAHSAEELRLP 105

Query: 75  ------YVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCR 134
                 +     +A     S A+S G R  VA       +  P  KTR+CNK+ +   C 
Sbjct: 106 XXXXXNWQETVTEASRNRESFAVSLGPRGNVA-----QTLKSPNWKTRICNKWQTTGYCP 165

Query: 135 FGDKCHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMG 155
           FG  CHFAHG         P E    GGG +  + ++G
Sbjct: 166 FGSHCHFAHG---------PSELHTFGGGLVEGECKIG 188

[Close]
BLAST of Carg17993 vs. TAIR10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 39/111 (35.14%), Postives = 46/111 (41.44%), Query Frame = 0 

Query: 43  CTKFFSTSGCPFGEGCHFAHYVPGGFKAIS--QMNSPAISPGIRN--------------- 102
           C KF     CP+G+ C+F H     F+  S     S  IS G                  
Sbjct: 189 CRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVN 248

Query: 103 -----PVAPPSFPDGVSPPAL-KTRLCNKFNSAEGCRFGDKCHFAHGEWDL 131
                PV  P    GV      KTRLC KF+    C FGDKCHFAHG+ +L
Sbjct: 249 RQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]
BLAST of Carg17993 vs. TAIR10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein)

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-05
Identity = 40/160 (25.00%), Postives = 52/160 (32.50%), Query Frame = 0 

Query: 34  TGLGSKSRPCTKFFSTSGCPFGEGCHFAH-------------------------YVPGGF 93
           +G   K R C KF++  GCP+GE C F H                               
Sbjct: 169 SGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRXXXXXXXXXXXXXXXXXXXXXXXX 228

Query: 94  KAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFAHGEW 153
                                      + P   KTR+CNK+     C FG KCHFAHG  
Sbjct: 229 XXXXXXXXXXXXXXXXXXXXXXXXXQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAA 288

Query: 154 DLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGP 169
           +L R          GGG + ++ + G   N    Q    P
Sbjct: 289 ELHR---------FGGGLVEEEGKDGVSPNPDTKQTVQNP 319

[Close]
BLAST of Carg17993 vs. Swiss-Prot
Match: sp|Q7F8R0|C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-83
Identity = 173/306 (56.54%), Postives = 211/306 (68.95%), Query Frame = 0 

Query: 5   GVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 64
           G RKR + + A   NGA  K   E +S  TG+GSKS+PCTKFFSTSGCPFGEGCHF H+ 
Sbjct: 4   GGRKRGKPDGA---NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHF 63

Query: 65  PGGFKAISQMNS---PAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKC 124
           PGG++A+++M +   PAI+P         + PDG   P +KTRLCNK+N+AEGC++GDKC
Sbjct: 64  PGGYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKC 123

Query: 125 HFAHGEWDLGRP-----NPPPEYGGMGGGPLGQQPRMGGGWNVPP-PQPNHGPAASFGAS 184
           HFAHGE +LG+P     + PP        P+G  PR  G +  PP P P     ASFGAS
Sbjct: 124 HFAHGERELGKPMLMDSSMPP--------PMG--PRPTGHFAPPPMPSPAMSTPASFGAS 183

Query: 185 ATAKISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLA 244
           ATAKISVDASLAG IIG+ GVN+K I R+TGA+L+I+DHESD++LKNIELEGTFDQI  A
Sbjct: 184 ATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNA 243

Query: 245 SSMVRELIANV-GAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHG 301
           S+MVRELI ++ G A                   NFKTKLC NF KG+CTF +RCHFAHG
Sbjct: 244 SAMVRELIVSIGGGAPPQGKKPVGGSHRGGGPGSNFKTKLCENFTKGSCTFGDRCHFAHG 296

[Close]
BLAST of Carg17993 vs. Swiss-Prot
Match: sp|Q7XPK1|C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.4e-79
Identity = 177/303 (58.42%), Postives = 214/303 (70.63%), Query Frame = 0 

Query: 7   RKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPG 66
           RKR R +TA NG  A  K   E +S  TGL SK +PCTKFFST GCPFGEGCHF+H+VPG
Sbjct: 8   RKRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 67  GFKAISQ---MNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHF 126
           G++A+++   + +PA+    R P+   +  +     + KTR+C K+N+AEGC+FGDKCHF
Sbjct: 68  GYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHF 127

Query: 127 AHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKISVD 186
           AHGE +LG+P        M   P+G   R GG    PPP     PA +FGASATAKISVD
Sbjct: 128 AHGERELGKPAYMSHESAM-APPMG--GRYGGRPEPPPPAAMGPPAGNFGASATAKISVD 187

Query: 187 ASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELI 246
           ASLAG IIGK GVN+K ICR+TG +LSI+DHESDS+LKNIELEG FDQI  AS+MV ELI
Sbjct: 188 ASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGELI 247

Query: 247 ANVGAA------SXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESE 301
           A +  +      + XXXXXXXXXXXXX    N+KTKLC NF KGTCTF +RCHFAHGE+E
Sbjct: 248 ATISPSTPAKKPAGXXXXXXXXXXXXXGGRSNYKTKLCENFVKGTCTFGDRCHFAHGENE 306

[Close]
BLAST of Carg17993 vs. Swiss-Prot
Match: sp|Q69XQ3|C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.8e-74
Identity = 155/292 (53.08%), Postives = 197/292 (67.47%), Query Frame = 0 

Query: 19  NGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPGGFKAISQMNS-- 78
           NGA K+++   +S   G+GSK +PCTKFFSTSGCPFG  CHF H  PGG++A ++M S  
Sbjct: 15  NGAAKRARAS-ESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHG 74

Query: 79  --PAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFAHGEWDLGRP- 138
                +P  R P+ P + P+G    ++KTR+CNK+N+AEGC++G KCHFAHGE +LG+P 
Sbjct: 75  GTAVAAPPGRMPLGPGA-PNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPM 134

Query: 139 ---NPPPEYGGMGGGPLGQQPRMGGGWNVPP-PQPNHGPAASFGASATAKISVDASLAGP 198
              N  P        P+G  P     +  PP P P+  P ++FGASATAKISVDASLAG 
Sbjct: 135 LLDNSMPH-------PMGSMP-----FEAPPMPGPDIVPPSTFGASATAKISVDASLAGG 194

Query: 199 IIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELIANVGAA 258
           IIGK G N+K+I RMTGA+L+I+D+ES+ +LKNIELEGTFDQI  AS+MV ELI  + + 
Sbjct: 195 IIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRI-SG 254

Query: 259 SXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRKP 302
           +                  NFKTKLC NF KG+CTF +RCHFAHGESELRKP
Sbjct: 255 NAPPAKNPGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRKP 291

[Close]
BLAST of Carg17993 vs. Swiss-Prot
Match: sp|Q9FG30|C3H52_ARATH (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-60
Identity = 142/299 (47.49%), Postives = 173/299 (57.86%), Query Frame = 0 

Query: 7   RKRERAETAL--NGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E A   N NG FK+SK E++S+STGLGSKS+PCTKFFSTSGCPFG+ CHF HYV
Sbjct: 4   RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63

Query: 67  PGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFA 126
           PGG+ A +QM +      +R PV+  S                   + +G          
Sbjct: 64  PGGYNAAAQMTN------LRPPVSQVS------------------RNMQG---------- 123

Query: 127 HGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKISVDA 186
                              GGP G+    G         P  GP + FGAS T+KISVDA
Sbjct: 124 ------------------SGGPGGRFSGRG--------DPGSGPVSIFGAS-TSKISVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK G++SK ICR TGA+LSIKDHE D +LK IELEGTF+QIN+AS MVRELI 
Sbjct: 184 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 247 NVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESELRKPGM 304
            +G  S                  N+KTK+C  ++KG CT+ +RCHFAHGESELR+ G+
Sbjct: 244 RLG--SVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]
BLAST of Carg17993 vs. Swiss-Prot
Match: sp|Q9C7C3|C3H36_ARATH (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.4e-56
Identity = 144/305 (47.21%), Postives = 174/305 (57.05%), Query Frame = 0 

Query: 7   RKRERAET-ALNGN-GAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E  + N N G +KKSK E++S STGLGSKS+PCTKFFSTSGCPFGE CHF HYV
Sbjct: 4   RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63

Query: 67  PGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDKCHFA 126
           PGG+ A+SQM +                   + PP  +    N   S  G RF  +    
Sbjct: 64  PGGYNAVSQMTN-------------------MGPPIPQVSR-NMQGSGNGGRFSGR---- 123

Query: 127 HGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKISVDA 186
            GE                 GP                    G  ++FG SATA+ SVDA
Sbjct: 124 -GE----------------SGP--------------------GHVSNFGDSATARFSVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK GV+SK ICR TG +LSI+DHE D +LKNI LEGT +QI+ AS+MV++LI 
Sbjct: 184 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 243

Query: 247 NVGA------ASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGESEL 304
            + +        XXXXXXX           NFKTK+C  F+KG CTF +RCHFAHGE+EL
Sbjct: 244 RLNSXXXXXXXXXXXXXXXMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAEL 247

[Close]
BLAST of Carg17993 vs. TrEMBL
Match: tr|A0A0A0M2L9|A0A0A0M2L9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605650 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.8e-135
Identity = 256/310 (82.58%), Postives = 268/310 (86.45%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD DG RKRER ETALNGNG FKKSKPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGG K+ISQM SPA+ PGIRNP  P SFPDGV PPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPDGV-PPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           C++AHGEW+LGRPNPP ++GGMG GP+ QQPRMGGGW        HGPAASFGASATAKI
Sbjct: 121 CYYAHGEWELGRPNPPQDHGGMGPGPM-QQPRMGGGWXXXXXXXXHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNGVNSKNICRMTGARLSIK+HESD +LKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAAS-------XXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAH 300
           ELIANVGAAS       XXXXXXXX          NFKTKLCANF KG CTFRERCHFAH
Sbjct: 241 ELIANVGAASANNAMXXXXXXXXXXGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAH 300

Query: 301 GESELRKPGM 304
           GESELRKPGM
Sbjct: 301 GESELRKPGM 308

[Close]
BLAST of Carg17993 vs. TrEMBL
Match: tr|A0A1S3BQ69|A0A1S3BQ69_CUCME (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103492494 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 3.0e-135
Identity = 256/311 (82.32%), Postives = 269/311 (86.50%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD DG RKRER ETALNGNG FKKSKPE+DSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120
           AHYVPGG K+ISQM SPA+ PGIRNP  P SFPDGV PPA+KTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPDGV-PPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180
           C++AHGEW+LGRPNPP ++GGMG GP+ QQPRMGGGW        HGPAASFGASATAKI
Sbjct: 121 CYYAHGEWELGRPNPPQDHGGMGPGPM-QQPRMGGGWXXXXXXXXHGPAASFGASATAKI 180

Query: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240
           SVDASLAGPIIGKNG+NSKNICRMTGARLSIK+HESD +LKNIELEGTFDQINLASSMVR
Sbjct: 181 SVDASLAGPIIGKNGINSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANVGAAS--------XXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFA 300
           ELIANVGAAS        XXXXXXXXX         NFKTKLCANF KG CTFRERCHFA
Sbjct: 241 ELIANVGAASANNAMXXXXXXXXXXXXMQQSSGSANNFKTKLCANFTKGACTFRERCHFA 300

Query: 301 HGESELRKPGM 304
           HGESELRKPGM
Sbjct: 301 HGESELRKPGM 309

[Close]
BLAST of Carg17993 vs. TrEMBL
Match: tr|A0A067JK64|A0A067JK64_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26709 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.9e-106
Identity = 201/307 (65.47%), Postives = 231/307 (75.24%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD  GVRKR R E  LNGNG FKKS+ E++S STG+GSKS+PCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDYGGVRKRGRPEATLNGNGGFKKSRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQM----NSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCR 120
            HYVPGGFKA+SQM    ++ A+ P  RN   PPSFPDG SPPA+KTRLCNK+N+AEGC+
Sbjct: 61  LHYVPGGFKAVSQMLNIGSNQALPPANRNSGVPPSFPDGSSPPAVKTRLCNKYNTAEGCK 120

Query: 121 FGDKCHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASA 180
           FGDKCHFAHGEW+LG+P  P        GP+    RMG    + PP    G  ASFGA+A
Sbjct: 121 FGDKCHFAHGEWELGKPTGPSYEDPRSMGPI--PGRMGR--QMEPPHQGLGAGASFGANA 180

Query: 181 TAKISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLAS 240
           TAKIS+DASLAG IIGKNGVNSK ICR+TGA+LSI++HE+D +L+NIE EGTFDQIN AS
Sbjct: 181 TAKISIDASLAGAIIGKNGVNSKQICRLTGAKLSIREHETDPNLRNIEFEGTFDQINQAS 240

Query: 241 SMVRELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGES 300
           SMVRELI NV  AS                  NFKTKLC NF KG+CTF +RCHFAHGE+
Sbjct: 241 SMVRELIGNVSQAS---APPMKNPAMHSSASQNFKTKLCENFTKGSCTFGDRCHFAHGEN 300

Query: 301 ELRKPGM 304
           +LRKPGM
Sbjct: 301 DLRKPGM 300

[Close]
BLAST of Carg17993 vs. TrEMBL
Match: tr|F6GUE5|F6GUE5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g01290 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105
Identity = 203/309 (65.70%), Postives = 232/309 (75.08%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSKPELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           M+  G RKR R E  LNGNG FKKSK E++S S+G+GSKS+PCTKFFSTSGCPFGEGCHF
Sbjct: 1   MELGGARKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQM-----NSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGC 120
            HYVPGG KA+SQM     N+P ++P  RNP  PPSFPDG SPPA+KTRLCNK+NSAEGC
Sbjct: 61  LHYVPGGIKAVSQMVNLGGNTP-LAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGC 120

Query: 121 RFGDKCHFAHGEWDLGRPNPP---PEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASF 180
           +FGDKCHFAHGEW+LG+P  P    ++ GMG G      R+ G   + PP P    AASF
Sbjct: 121 KFGDKCHFAHGEWELGKPTLPSHHEDHRGMGSG------RLAG--RLEPPPPGLAAAASF 180

Query: 181 GASATAKISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQI 240
           GASATAKISVDASLAG IIGK+GVNSK ICR+TGA+LSIKDH+SD +L+NIELEGTFDQI
Sbjct: 181 GASATAKISVDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQI 240

Query: 241 NLASSMVRELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFA 300
             AS+MVRELI N+ +AS                  NFKTKLC NF KG+CTF ERCHFA
Sbjct: 241 KQASAMVRELIVNISSAS--GPPMRNPAMQASAAANNFKTKLCENFTKGSCTFGERCHFA 298

Query: 301 HGESELRKP 302
           HG  ELRKP
Sbjct: 301 HGADELRKP 298

[Close]
BLAST of Carg17993 vs. TrEMBL
Match: tr|A0A2P2LFN0|A0A2P2LFN0_RHIMU (Uncharacterized protein MANES_15G103200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.6e-104
Identity = 204/308 (66.23%), Postives = 232/308 (75.32%), Query Frame = 0 

Query: 1   MDPDGVRKRERAETALNGNGAFKKSK-PELDSLSTGLGSKSRPCTKFFSTSGCPFGEGCH 60
           M+  G RKR R E A NGNG FKKSK  E++S STG+GSKS+PCTKFFSTSGCPFGEGCH
Sbjct: 1   MEFGGGRKRGRPEAAWNGNGGFKKSKQQEMESYSTGIGSKSKPCTKFFSTSGCPFGEGCH 60

Query: 61  FAHYVPGGFKAISQM----NSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGC 120
           F HYVPGGFKA+SQM     +PA+ P  RNP  PPSFPDG SPPA+KTR+CNK+N+AEGC
Sbjct: 61  FLHYVPGGFKAVSQMLNLSGAPALPPAGRNPGVPPSFPDGSSPPAVKTRVCNKYNTAEGC 120

Query: 121 RFGDKCHFAHGEWDLGRPNPPPEYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGAS 180
           +FGDKCHFAHGEW+LG+P   P YGG     +GQ P  G G  + PP    G AASFGA 
Sbjct: 121 KFGDKCHFAHGEWELGKPT-APSYGGPRA--MGQIPG-GIGRQIEPPSQGLGAAASFGAI 180

Query: 181 ATAKISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLA 240
           A AKISVDASLAG IIGKNGV+SK ICR+TGA+LSI++HESD +L+NIELEGTFDQI  A
Sbjct: 181 AAAKISVDASLAGAIIGKNGVHSKQICRLTGAKLSIREHESDPNLRNIELEGTFDQIKQA 240

Query: 241 SSMVRELIANVGAASXXXXXXXXXXXXXXXXXXNFKTKLCANFAKGTCTFRERCHFAHGE 300
           S+MVRELI NVG AS                  NFKTKLC NFAKG+CTF +RCHFAHG 
Sbjct: 241 SAMVRELIVNVGQAS----GPPMKNPTIHAPGNNFKTKLCENFAKGSCTFGDRCHFAHGT 300

Query: 301 SELRKPGM 304
            ELR+ GM
Sbjct: 301 EELRRTGM 300

The following BLAST results are available for this feature:
BLAST of Carg17993 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933588.11.3e-16199.01zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata][more]
XP_023531374.14.5e-15994.72zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo][more]
XP_022967901.11.3e-15389.80zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima][more]
XP_023516879.15.6e-14184.26zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita pepo su... [more]
XP_022988178.12.6e-13882.95zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima][more]
BLAST of Carg17993 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06770.11.4e-6147.49KH domain-containing protein / zinc finger (CCCH type) family protein[more]
AT3G12130.13.6e-5747.21KH domain-containing protein / zinc finger (CCCH type) family protein[more]
AT2G35430.15.2e-0831.65Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT3G19360.11.2e-0735.14Zinc finger (CCCH-type) family protein[more]
AT1G32360.17.1e-0525.00Zinc finger (CCCH-type) family protein[more]
BLAST of Carg17993 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q7F8R0|C3H14_ORYSJ1.2e-8356.54Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q7XPK1|C3H31_ORYSJ2.4e-7958.42Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q69XQ3|C3H44_ORYSJ1.8e-7453.08Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q9FG30|C3H52_ARATH2.5e-6047.49Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9C7C3|C3H36_ARATH6.4e-5647.21Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Carg17993 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M2L9|A0A0A0M2L9_CUCSA1.8e-13582.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605650 PE=4 SV=1[more]
tr|A0A1S3BQ69|A0A1S3BQ69_CUCME3.0e-13582.32zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A067JK64|A0A067JK64_JATCU2.9e-10665.47Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26709 PE=4 SV=1[more]
tr|F6GUE5|F6GUE5_VITVI1.1e-10565.70Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g01290 PE=4 SV=... [more]
tr|A0A2P2LFN0|A0A2P2LFN0_RHIMU1.6e-10466.23Uncharacterized protein MANES_15G103200 OS=Rhizophora mucronata OX=61149 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR004087KH_dom
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17993-RACarg17993-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 100..127
e-value: 5.2E-4
score: 29.3
coord: 37..64
e-value: 1.6
score: 14.6
coord: 269..295
e-value: 9.2E-6
score: 35.2
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 270..295
e-value: 6.3E-6
score: 25.9
coord: 102..127
e-value: 1.3E-6
score: 28.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 37..65
score: 12.211
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 100..128
score: 13.713
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 269..296
score: 15.178
IPR004087K Homology domainSMARTSM00322kh_6coord: 174..244
e-value: 4.0E-11
score: 53.0
NoneNo IPR availableGENE3DG3DSA:4.10.1000.10coord: 267..300
e-value: 2.6E-11
score: 44.7
coord: 96..132
e-value: 4.9E-11
score: 43.9
NoneNo IPR availablePFAMPF14608zf-CCCH_2coord: 45..62
e-value: 0.43
score: 11.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..172
NoneNo IPR availablePANTHERPTHR10288:SF154SUBFAMILY NOT NAMEDcoord: 9..303
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 9..303
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 175..239
score: 13.502
NoneNo IPR availableCDDcd00105KH-Icoord: 177..239
e-value: 4.56544E-12
score: 59.1107
IPR036612K Homology domain, type 1 superfamilyGENE3DG3DSA:3.30.1370.10coord: 169..266
e-value: 3.7E-13
score: 51.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 165..245
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 178..241
e-value: 7.4E-9
score: 35.2
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 98..131
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 38..64
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 268..299