Carg17896 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17896
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_114 : 146168 .. 149212 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTGTTTCATGGGATGGAGAGTGGAAAATGAGAAATAAGTCTATGTTTACTTGAAACCTGAATAATTTCCTCGAAACGACGTCGTATTATGTGTGGTGGGTGAGTACCTACCTAGAAAAGCATTAAGCCCATCTCCTGGCTCTCCTCTCACCCTTTCTCCAGTCGCCCAGATTGCACATCATCTCTTTCTGGCTTTTGGCCTCTATCTCCCATGGTGTTCATGAAACCTTAATTTAGGGTTTCTTTATTGTTCCTGTGCGCGTTCTCTATCTCTGAAGAAGAAGAAGAATAAGAAGAAGAATAAGAAGAAGAATGGCTTCCGTTTCGCTAACTAACCTTGATTTGGCGACACCTTTCCTGGGTCTAAACCTGTAATTCCCTCTCTCTCGTTTTCTCAAACTTCGGAATTTATTGAGTTTTGGTTTTAGCTTATGTGTGTGGTGTGCTTCTGCTCTTTTCCAGGTCTAGTCGCCTTACCGGGGTGAAGGGAAGACCATTTCGCGCGTTGTTTAGAAGCCCCAGATTTGTTTTGGATACACCATATGAAGGTACCTTTCTATTGTCTTCTTGCATTTTCATTCTTGAAACAATTTGCAATTGTGCATACTTAGTATACATGGGGTGGGTTTCCATCGATTAATTCCAGCGGCTGCAGCAGGAGGTTGAATTACCCTATGAATTATGAGACTAATGGTAATTTCATATTGATTGATTCTTTCTGCTCCAATCGGCTTTTCTGTGGATATTTTTAAAATGGTTTGATTGGAAGAACGTGGAGTTATCCTTACCTCGAGAAACTTATGTTCTAAAGAACATTATCTGCTTTATTTCTGAAATTCTTTCCTCTTTGGTTTTAAGTATTCATAAGAAATTTTGATATAGCTAGTGGATTATATAACGTGGACAATATTAAATTTGATAGTTACGTGAGACTCGGCCTCCTGGTTGTTTCTTCGCAGTATGCTTGACTTAAAAGTTTATTAGATTTGTTTGTCTTAAAAATATCCCTACTTTTTCCTAGCTGCTATGGTGATAAATCTGTCAATCCTTAATTATTCGCAGGTAATGTCACAAAGTTCTCTCGAATTCGTGTTTGGGATCCATATAAACGCCTTGGTGTAAGTACTGCTGCTTCAGAGGAAGAAATTTGGAGTGCACGGAATTTTCTTTTGCAGCAGTATTCCGGTCATGAAAGAAGTGAGGAATCTATAGAAGCTGCTTTTGAGAAAATATTGATGGCAAGCTTCCAGCATAGGAAAAAGACAAAGATTAATTTGAAAACCAGGTTGAAGAAGCAAGTCGAGGAGTCCCCACCATGGTTTAAGAACTTGCTGAATTTTGTAGAACTTCCTCCAACTGATGTTATCTTCAGAAGATTGTTTCTTTTTGCATTTATGGGTGGCTGGAGCATTATGAACTCAGCGGAAGGTGGACCTGCTTTTCAGGTTAGTATAATATTCCTTCAGTAAACGCATTTTTTCCCTTTATAATGTCATCTCAATATATGAATAAACATATTTTTAGTGATGTCCCGAAGGCTAGTGCTTCTGTTGGGAAGTAATCAAAAGGGTGTAAATCGGAGCTGCACGTTTTGAATGTATTAGTTAGAGTGGTAAGGGAAGAAGAGTACCTAGGAACGTGCCACAAAATGCATACTTATCCCTTGTCGCATACTCAATTTCTGATCCAAATATTTAGAATAAGTAAAAATAATGGCAATAAGGAAAAAAATAGGAAAAGCAGTGAGTTCACGGTTATAAGCCATCTACCATCCACTGTAATGCCGTAGCCTCTTCTCTTCTTTAATTTTCGTTTTTGTGGCAGTGACTGTGTGAGATCCCATATCGGTTGGAGAGGGGAACATAGTATTCCTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACAGTGAGACTGACGGCGATACGTAGTGGATTAAAACGGACATATCTGCTAGCAATGGGCTTGGGCGGTTACAAACCTTGATTTAGTGATTGAATATTCAAATTATAAATCTTGATCCAGGAAAAATAAATTATTGTGTTAGCTCTGCGTCTTGCAAGCTTTAGTAATAAAGTGCCACTTTGAGATTAAGAATAGATGGGTGCACATAAGCTTTGAAGAATCCACGGATTTAAGATAAAAGGTTGCGCTCGAGGGTTCTTATCTTGCCAATCAATTAATTATTTTGACAGAATCCAACATCTGCTTTATCTATATTCCATCATATTAATTATTAAATTAGTTACTTGGTAGGAGTTCGTGCATCATAGCTTCGGTTCTCTTCCTCTAGTTGAGCATTTTTCGATTATCCCACGTTATTTTTCTTCCTCTTATTCTTATTCATCTGTATGGTATGATATCAAGATATCTAAAATTGCACTCGGGATTGGTTATACATCTTTGGGTCTATTCCATTTAAAAGCACATTCTGTCTTTGCATCTAATTTGGATCCTGTTGGGGGTGTTTTAGGCCACTGTCATCTCTGGTTAAACTTTGTATATCGATCAATGCAGGTTGCAGTGTCCTTGGCGGCCTGCATATATTTTCTCAATGAGAAGACTAAAAGTGTGGCTCGGGCTTCTATTATTGGGTAAAACTTGCACGAACTACTGATCTCATTATATATCTCAAAACTAAAACTCAGTGACTTATATGCCGTCTTTACTGTTCTGCCTGCAGACTTGGTTCTCTTGTGGCTGGTTGGGTATGCGGTTCGTTGATTGTTCCGAGTATTCCTTCGTTTCTATTGCAACCGACGTGGTCGCTCGAACTACTTACATCTCTAGTAGTATACGTCTTCTTGTTTCTGTCCTGTACTTTTCTCAAGTAGATCTCTCTGTTTGTGCTTCTAGCTTATTATCAAGTAGTAACATGGAAAATGGATTTAATGGGGGAATTTGCAGATATTATTGATCAGAGCTATCTGTGATCTTCCCTTCTTTAATTTTCATTATGACTTGAACTTTTATCACCATTCTACTCTTGCACATCTCAAGAAATAAGCCATCGTTGGGTGCGTTTAGCTTC

mRNA sequence

TTTAATTGTTTCATGGGATGGAGAGTGGAAAATGAGAAATAAGTCTATGTTTACTTGAAACCTGAATAATTTCCTCGAAACGACGTCGTATTATGTGTGGTGGGTGAGTACCTACCTAGAAAAGCATTAAGCCCATCTCCTGGCTCTCCTCTCACCCTTTCTCCAGTCGCCCAGATTGCACATCATCTCTTTCTGGCTTTTGGCCTCTATCTCCCATGGTGTTCATGAAACCTTAATTTAGGGTTTCTTTATTGTTCCTGTGCGCGTTCTCTATCTCTGAAGAAGAAGAAGAATAAGAAGAAGAATAAGAAGAAGAATGGCTTCCGTTTCGCTAACTAACCTTGATTTGGCGACACCTTTCCTGGGTCTAAACCTGTCTAGTCGCCTTACCGGGGTGAAGGGAAGACCATTTCGCGCGTTGTTTAGAAGCCCCAGATTTGTTTTGGATACACCATATGAAGGTAATGTCACAAAGTTCTCTCGAATTCGTGTTTGGGATCCATATAAACGCCTTGGTGTAAGTACTGCTGCTTCAGAGGAAGAAATTTGGAGTGCACGGAATTTTCTTTTGCAGCAGTATTCCGGTCATGAAAGAAGTGAGGAATCTATAGAAGCTGCTTTTGAGAAAATATTGATGGCAAGCTTCCAGCATAGGAAAAAGACAAAGATTAATTTGAAAACCAGGTTGAAGAAGCAAGTCGAGGAGTCCCCACCATGGTTTAAGAACTTGCTGAATTTTGTAGAACTTCCTCCAACTGATGTTATCTTCAGAAGATTGTTTCTTTTTGCATTTATGGGTGGCTGGAGCATTATGAACTCAGCGGAAGGTGGACCTGCTTTTCAGGTTGCAGTGTCCTTGGCGGCCTGCATATATTTTCTCAATGAGAAGACTAAAAGTGTGGCTCGGGCTTCTATTATTGGACTTGGTTCTCTTGTGGCTGGTTGGGTATGCGGTTCGTTGATTGTTCCGAGTATTCCTTCGTTTCTATTGCAACCGACGTGGTCGCTCGAACTACTTACATCTCTAGTAGTATACGTCTTCTTGTTTCTGTCCTGTACTTTTCTCAAGTAGATCTCTCTGTTTGTGCTTCTAGCTTATTATCAAGTAGTAACATGGAAAATGGATTTAATGGGGGAATTTGCAGATATTATTGATCAGAGCTATCTGTGATCTTCCCTTCTTTAATTTTCATTATGACTTGAACTTTTATCACCATTCTACTCTTGCACATCTCAAGAAATAAGCCATCGTTGGGTGCGTTTAGCTTC

Coding sequence (CDS)

ATGGCTTCCGTTTCGCTAACTAACCTTGATTTGGCGACACCTTTCCTGGGTCTAAACCTGTCTAGTCGCCTTACCGGGGTGAAGGGAAGACCATTTCGCGCGTTGTTTAGAAGCCCCAGATTTGTTTTGGATACACCATATGAAGGTAATGTCACAAAGTTCTCTCGAATTCGTGTTTGGGATCCATATAAACGCCTTGGTGTAAGTACTGCTGCTTCAGAGGAAGAAATTTGGAGTGCACGGAATTTTCTTTTGCAGCAGTATTCCGGTCATGAAAGAAGTGAGGAATCTATAGAAGCTGCTTTTGAGAAAATATTGATGGCAAGCTTCCAGCATAGGAAAAAGACAAAGATTAATTTGAAAACCAGGTTGAAGAAGCAAGTCGAGGAGTCCCCACCATGGTTTAAGAACTTGCTGAATTTTGTAGAACTTCCTCCAACTGATGTTATCTTCAGAAGATTGTTTCTTTTTGCATTTATGGGTGGCTGGAGCATTATGAACTCAGCGGAAGGTGGACCTGCTTTTCAGGTTGCAGTGTCCTTGGCGGCCTGCATATATTTTCTCAATGAGAAGACTAAAAGTGTGGCTCGGGCTTCTATTATTGGACTTGGTTCTCTTGTGGCTGGTTGGGTATGCGGTTCGTTGATTGTTCCGAGTATTCCTTCGTTTCTATTGCAACCGACGTGGTCGCTCGAACTACTTACATCTCTAGTAGTATACGTCTTCTTGTTTCTGTCCTGTACTTTTCTCAAGTAG

Protein sequence

MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVWDPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVYVFLFLSCTFLK

Homology

[Close]

BLAST of Carg17896 vs. NCBI nr
Match: XP_023516827.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.0 bits (1255), Expect = 1.9e-134
Identity = 250/251 (99.60%), Postives = 250/251 (99.60%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPR VLDTPYEGNVTKFSRIRVW
Sbjct: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRCVLDTPYEGNVTKFSRIRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS
Sbjct: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY
Sbjct: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240

Query: 241 VFLFLSCTFLK 252
           VFLFLSCTFLK
Sbjct: 241 VFLFLSCTFLK 251

[Close]

BLAST of Carg17896 vs. NCBI nr
Match: XP_022988476.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 485.0 bits (1247), Expect = 1.6e-133
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           MASVSLTNLDLATPFLGLNLSSRL GVKGRPFRALFRSPR VLDTPYEGNVTKFSRIRVW
Sbjct: 1   MASVSLTNLDLATPFLGLNLSSRLNGVKGRPFRALFRSPRCVLDTPYEGNVTKFSRIRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS
Sbjct: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTK+VARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY
Sbjct: 181 LAACIYFLNEKTKTVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240

Query: 241 VFLFLSCTFLK 252
           VFLFLSCTFLK
Sbjct: 241 VFLFLSCTFLK 251

[Close]

BLAST of Carg17896 vs. NCBI nr
Match: XP_022921371.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 484.2 bits (1245), Expect = 2.7e-133
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           MASVSLTNLDLATPFLGLNLSSRL GVKGRPFRALFRSPR VLDTPYEGNVTKFSRIRVW
Sbjct: 1   MASVSLTNLDLATPFLGLNLSSRLIGVKGRPFRALFRSPRCVLDTPYEGNVTKFSRIRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFE+ILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEEILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS
Sbjct: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY
Sbjct: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240

Query: 241 VFLFLSCTFLK 252
           VFLFLSCTFLK
Sbjct: 241 VFLFLSCTFLK 251

[Close]

BLAST of Carg17896 vs. NCBI nr
Match: XP_022931604.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 465.7 bits (1197), Expect = 1.0e-127
Identity = 236/251 (94.02%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           MAS SLTNLDLATPFLG NLS RL   KG+PF ALFRSP+ VLDTPYEGNVTKF RIRVW
Sbjct: 1   MASFSLTNLDLATPFLGQNLSGRLNRAKGKPFCALFRSPKCVLDTPYEGNVTKFPRIRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLG+STAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGISTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRR+FLFAFMGGWSIMNSAEGGPAFQVAVS
Sbjct: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRMFLFAFMGGWSIMNSAEGGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTKS+ARASIIGLGSLVAGWVCGSL+VPSIPSFLLQPTWSLELLTSLVVY
Sbjct: 181 LAACIYFLNEKTKSLARASIIGLGSLVAGWVCGSLVVPSIPSFLLQPTWSLELLTSLVVY 240

Query: 241 VFLFLSCTFLK 252
           VFLFLSCTFLK
Sbjct: 241 VFLFLSCTFLK 251

[Close]

BLAST of Carg17896 vs. NCBI nr
Match: XP_023007253.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 463.4 bits (1191), Expect = 5.0e-127
Identity = 236/251 (94.02%), Postives = 241/251 (96.02%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           MAS SLTNLDLAT FLG NLS RL   KG+PF ALFRSP+ VLDTPYEGNVTKF RIRVW
Sbjct: 1   MASFSLTNLDLATSFLGQNLSGRLNRAKGKPFCALFRSPKCVLDTPYEGNVTKFPRIRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS
Sbjct: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTKS+ARASIIGLGSLVAGWVCGSL+VPSIPSFLLQPTWSLELLTSLVVY
Sbjct: 181 LAACIYFLNEKTKSLARASIIGLGSLVAGWVCGSLVVPSIPSFLLQPTWSLELLTSLVVY 240

Query: 241 VFLFLSCTFLK 252
           +FLFLSCTFLK
Sbjct: 241 IFLFLSCTFLK 251

[Close]

BLAST of Carg17896 vs. TAIR10
Match: AT5G23040.1 (Protein of unknown function (DUF3353))

HSP 1 Score: 348.6 bits (893), Expect = 3.2e-96
Identity = 172/224 (76.79%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 31  PFRAL---FRSPRFVLDTPYEGNVTKFSRIRVWDPYKRLGVSTAASEEEIWSARNFLLQQ 90
           PFR +   F++ +  +D+ Y GNV  F R RVWDPYKRLGVS  ASEEEIW++RNFLLQQ
Sbjct: 35  PFRNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQ 94

Query: 91  YSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLKKQVEESPPWFKNLLNFVELPPT 150
           Y+GHERSEESIE AFEK+LM+SF  RKKTKINLK++LKK+VEESPPW K LL+FVE+PP 
Sbjct: 95  YAGHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPM 154

Query: 151 DVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSVARASIIGLGSLV 210
           D IFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAAC+YFLNEKTKS+ RA +IG+G+LV
Sbjct: 155 DTIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRACLIGIGALV 214

Query: 211 AGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVYVFLFLSCTFLK 252
           AGW CGSLI+P IP+FL+QPTW+LELLTSLV YVFLFLSCTFLK
Sbjct: 215 AGWFCGSLIIPMIPTFLIQPTWTLELLTSLVAYVFLFLSCTFLK 258

[Close]

BLAST of Carg17896 vs. TAIR10
Match: AT3G51140.1 (Protein of unknown function (DUF3353))

HSP 1 Score: 132.5 bits (332), Expect = 3.6e-31
Identity = 89/251 (35.46%), Postives = 142/251 (56.57%), Query Frame = 0


Query: 6   LTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVWDPYKR 65
           L N + A P L    SSRL     R    + R+         + +   F RI V DPYKR
Sbjct: 38  LNNRNSAWPVL---KSSRLALPTQRRNAMITRAMSASFGDMADDSAAIFPRINVKDPYKR 97

Query: 66  LGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLK 125
           LG+S  ASE+EI  ARNFL+QQY+GH+ S ++IE+A +KI+M  F  RK  KI++  ++ 
Sbjct: 98  LGISRMASEDEIQGARNFLIQQYAGHKPSVDAIESAHDKIIMQKFHERKNPKIDISKKV- 157

Query: 126 KQVEESPPWFKNLLNFV----ELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSL 185
           +QV +S      ++NFV    + PP  V+ +    FA +G  +++   E GP  QV +SL
Sbjct: 158 RQVRQS-----KVVNFVFERFQTPPNAVLVKTAVTFAVLGVLTVLFPTEEGPTLQVLLSL 217

Query: 186 AACIYFLNEKTKSVARASIIGLGSLVAGWVCGS-LIVPSIPSFLLQPTWSLELLTSLVVY 245
            A  YF++++ +      + G G+ +  W+ G+ L+V  IP F+  P    E+++SL+ Y
Sbjct: 218 IATFYFIHQRLQKKLWTFLYGAGAFIFSWLVGTFLMVSVIPPFIKGPR-GFEVMSSLLSY 277

Query: 246 VFLFLSCTFLK 252
           V L+++ ++L+
Sbjct: 278 VLLWVASSYLR 278

[Close]

BLAST of Carg17896 vs. TAIR10
Match: AT2G20920.1 (Protein of unknown function (DUF3353))

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-08
Identity = 48/172 (27.91%), Postives = 75/172 (43.60%), Query Frame = 0


Query: 64  KRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINLKTR 123
           K LGVS  AS +EI  A+  +L        +    EAA++ +LM S   R+  K+     
Sbjct: 79  KVLGVSEGASFDEILRAKKSILASRKDDPNAISQAEAAYDMLLMQSLNQRRAGKVVSNNI 138

Query: 124 LKKQVEESPP--------WFKNLLNFVELPPTD------VIFRRLFLFAFMGGWSIMNS- 183
               V+ S P        W KN    V++P T        ++  + +  ++ G S  +S 
Sbjct: 139 RYADVKSSNPLGTSTVTQWMKNPPVSVDMPSTSDLGIQAGVYGAMMVLTYVNGSSFESSG 198

Query: 184 ----AEGGPAFQVAVSLAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLI 217
                   P   +A S  A +YF+ +K   + +A+ +  G LVAG V GS I
Sbjct: 199 MPYAGADVPGLILASSFGASLYFMTKKKVKLGKAAALTAGGLVAGAVVGSAI 250

[Close]

BLAST of Carg17896 vs. Swiss-Prot
Match: sp|Q9FN50|CPP1_ARATH (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPP1 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.8e-95
Identity = 172/224 (76.79%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 31  PFRAL---FRSPRFVLDTPYEGNVTKFSRIRVWDPYKRLGVSTAASEEEIWSARNFLLQQ 90
           PFR +   F++ +  +D+ Y GNV  F R RVWDPYKRLGVS  ASEEEIW++RNFLLQQ
Sbjct: 35  PFRNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQ 94

Query: 91  YSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLKKQVEESPPWFKNLLNFVELPPT 150
           Y+GHERSEESIE AFEK+LM+SF  RKKTKINLK++LKK+VEESPPW K LL+FVE+PP 
Sbjct: 95  YAGHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPM 154

Query: 151 DVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSVARASIIGLGSLV 210
           D IFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAAC+YFLNEKTKS+ RA +IG+G+LV
Sbjct: 155 DTIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRACLIGIGALV 214

Query: 211 AGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVYVFLFLSCTFLK 252
           AGW CGSLI+P IP+FL+QPTW+LELLTSLV YVFLFLSCTFLK
Sbjct: 215 AGWFCGSLIIPMIPTFLIQPTWTLELLTSLVAYVFLFLSCTFLK 258

[Close]

BLAST of Carg17896 vs. Swiss-Prot
Match: sp|G5DBJ0|CPP1_NICBE (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CPP1 PE=1 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-91
Identity = 169/252 (67.06%), Postives = 197/252 (78.17%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPR-FVLDTPYEGNVTKFSRIRV 60
           MA+  ++ L L++ FLG   SSR   ++  P     R PR    DTPY GN+ +F R+ V
Sbjct: 1   MATTLISKLTLSSAFLGQQFSSRGNSMRSAPAGLFLRGPRCAATDTPYGGNIPQFPRVNV 60

Query: 61  WDPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKIN 120
           WDPYKRLG+S  ASEEE+WS+RNFLL QY  HERS ESIEAAFEKILMASF +RKKTKIN
Sbjct: 61  WDPYKRLGISRDASEEEVWSSRNFLLNQYYNHERSAESIEAAFEKILMASFINRKKTKIN 120

Query: 121 LKTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAV 180
           LKTRLKK+VEESPPW +NLL+FVELPP  +I RRLFLF FM  WS+MNS E GPAFQVA+
Sbjct: 121 LKTRLKKKVEESPPWVQNLLSFVELPPPVIILRRLFLFGFMACWSVMNSTEAGPAFQVAI 180

Query: 181 SLAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVV 240
           S  AC+YFLN+KTKS+ RA++IG G+LVAGW CGSL+VP IP  LL PTWSLELLTSL +
Sbjct: 181 SFGACVYFLNDKTKSLGRAALIGFGALVAGWFCGSLLVPMIPPNLLHPTWSLELLTSLFI 240

Query: 241 YVFLFLSCTFLK 252
           YV LFL CTFLK
Sbjct: 241 YVSLFLGCTFLK 252

[Close]

BLAST of Carg17896 vs. TrEMBL
Match: tr|A0A1S3BVF6|A0A1S3BVF6_CUCME (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494090 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.9e-123
Identity = 228/251 (90.84%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           MASVS+T LDLATPFL  NL  RL  + G+PFRALFRSP+ VLDTPYEGNVTKF RIRVW
Sbjct: 1   MASVSITKLDLATPFLAQNLPGRLNRLNGKPFRALFRSPKCVLDTPYEGNVTKFPRIRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLGVS+AASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGVSSAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQV+ESPPW KNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS
Sbjct: 121 KTRLKKQVDESPPWIKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTKS+ARASIIG GSLV GWVCGSL+ PSIPSFLLQPTWSLELLTSLVVY
Sbjct: 181 LAACIYFLNEKTKSLARASIIGFGSLVVGWVCGSLVGPSIPSFLLQPTWSLELLTSLVVY 240

Query: 241 VFLFLSCTFLK 252
            FLFLSCTFLK
Sbjct: 241 FFLFLSCTFLK 251

[Close]

BLAST of Carg17896 vs. TrEMBL
Match: tr|A0A0A0LUP3|A0A0A0LUP3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014380 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.7e-115
Identity = 213/229 (93.01%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 23  RLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVWDPYKRLGVSTAASEEEIWSARN 82
           RL  + G+PFRALFRSPR VLDTPYEGNVTKF R+RVWDPYKRLGVS+ ASEEEIW ARN
Sbjct: 5   RLNRLNGKPFRALFRSPRCVLDTPYEGNVTKFPRVRVWDPYKRLGVSSDASEEEIWGARN 64

Query: 83  FLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLKKQVEESPPWFKNLLNFV 142
           FLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLKKQVEESPPW KNLLNFV
Sbjct: 65  FLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINLKTRLKKQVEESPPWIKNLLNFV 124

Query: 143 ELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSVARASIIG 202
           ELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSVARASIIG
Sbjct: 125 ELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACIYFLNEKTKSVARASIIG 184

Query: 203 LGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVYVFLFLSCTFLK 252
            GSLV GWVCGSL+VPSIPSFLLQPTWSLELLTSLVVY FLFLSCTFLK
Sbjct: 185 FGSLVVGWVCGSLVVPSIPSFLLQPTWSLELLTSLVVYFFLFLSCTFLK 233

[Close]

BLAST of Carg17896 vs. TrEMBL
Match: tr|A0A2I4DGM9|A0A2I4DGM9_9ROSI (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108979952 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.6e-102
Identity = 194/252 (76.98%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MASVSLTN-LDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRV 60
           MAS+ L+    L+T FL             + + A F+ PR  +DTP+EGNV KFSR+RV
Sbjct: 39  MASLLLSKPSSLSTSFLPTKTFFHGNAKNRKTYCANFKGPRCAVDTPHEGNVQKFSRLRV 98

Query: 61  WDPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKIN 120
           WDPYKRLGVS  ASEEEIW +RNFLL+QY+GHERSEESIEAAFEKILMAS+QHRKKTKIN
Sbjct: 99  WDPYKRLGVSRDASEEEIWGSRNFLLEQYAGHERSEESIEAAFEKILMASYQHRKKTKIN 158

Query: 121 LKTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAV 180
           LK+RLKK+VEESPPW KNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAV
Sbjct: 159 LKSRLKKKVEESPPWVKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAV 218

Query: 181 SLAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVV 240
           SLAACIYFLNEKTKS+ARA IIG G+LV GW+CGSL+VP+IPS +L PTW+LELLTSLVV
Sbjct: 219 SLAACIYFLNEKTKSLARAFIIGFGALVTGWICGSLLVPNIPSVILHPTWTLELLTSLVV 278

Query: 241 YVFLFLSCTFLK 252
           Y FLFLSCTFLK
Sbjct: 279 YFFLFLSCTFLK 290

[Close]

BLAST of Carg17896 vs. TrEMBL
Match: tr|W9ST27|W9ST27_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004310 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 4.5e-100
Identity = 191/251 (76.10%), Postives = 208/251 (82.87%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNLSSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRIRVW 60
           M S+ L+  + ATPFLG  LS      K      +   PR  +DTPY GNV KF R+RVW
Sbjct: 1   MVSLCLSKPNFATPFLGQKLSFHGNTTKD---CVVLGGPRCAVDTPYGGNVPKFPRLRVW 60

Query: 61  DPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTKINL 120
           DPYKRLG+S  ASEEEIW +RNFLLQQY+GHERSEESIEAAFEKILMASFQHRKKTKINL
Sbjct: 61  DPYKRLGISRDASEEEIWGSRNFLLQQYTGHERSEESIEAAFEKILMASFQHRKKTKINL 120

Query: 121 KTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVS 180
           KTRLKKQVEESPPW KNLL+FVELPP D+  RRLFLFAFMGGWSI+NSAE GPAFQVAVS
Sbjct: 121 KTRLKKQVEESPPWIKNLLSFVELPPVDITLRRLFLFAFMGGWSIINSAESGPAFQVAVS 180

Query: 181 LAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSLVVY 240
           LAACIYFLNEKTKS+ RA IIG G+LV GWVCGSL+VP+IPS LL PTW+LEL TSLVVY
Sbjct: 181 LAACIYFLNEKTKSLGRAFIIGFGALVTGWVCGSLLVPNIPSVLLHPTWTLELATSLVVY 240

Query: 241 VFLFLSCTFLK 252
           VFLFL CTFLK
Sbjct: 241 VFLFLGCTFLK 248

[Close]

BLAST of Carg17896 vs. TrEMBL
Match: tr|A0A1U8NM96|A0A1U8NM96_GOSHI (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107949750 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99
Identity = 187/254 (73.62%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MASVSLTNLDLATPFLGLNL---SSRLTGVKGRPFRALFRSPRFVLDTPYEGNVTKFSRI 60
           M+S SL+N  L+TPF+G NL    +   G+   P       PR  +D PY GN   F RI
Sbjct: 1   MSSSSLSNPTLSTPFIGHNLRLNQNTKDGINCFPSLRRHGVPRCAVDMPYGGNAPTFPRI 60

Query: 61  RVWDPYKRLGVSTAASEEEIWSARNFLLQQYSGHERSEESIEAAFEKILMASFQHRKKTK 120
           RVWDPYKRLG+S  ASEEEIWSARNFLL+QY+GHERSEESIEAAFEK+LMASFQHRKKTK
Sbjct: 61  RVWDPYKRLGISPYASEEEIWSARNFLLEQYAGHERSEESIEAAFEKLLMASFQHRKKTK 120

Query: 121 INLKTRLKKQVEESPPWFKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSAEGGPAFQV 180
           INLK+RLKK+VEESPPW KNLLNFVELPP +VIFRRLFLFAFMGGWSIMNS+EGGPAFQV
Sbjct: 121 INLKSRLKKKVEESPPWIKNLLNFVELPPMEVIFRRLFLFAFMGGWSIMNSSEGGPAFQV 180

Query: 181 AVSLAACIYFLNEKTKSVARASIIGLGSLVAGWVCGSLIVPSIPSFLLQPTWSLELLTSL 240
           AVSLAACIYFLNEKTKS+ RA +IGLG+L  GW+CGS+ VP IP+ L+ PTW+LELLTSL
Sbjct: 181 AVSLAACIYFLNEKTKSLGRAFVIGLGALATGWICGSIFVPMIPTVLIHPTWTLELLTSL 240

Query: 241 VVYVFLFLSCTFLK 252
           V Y FLFL+CTFLK
Sbjct: 241 VAYAFLFLACTFLK 254

The following BLAST results are available for this feature:

BLAST of Carg17896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516827.1	1.9e-134	99.60	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita pepo subsp...	[more]
XP_022988476.1	1.6e-133	98.80	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022921371.1	2.7e-133	98.80	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita moschata]	[more]
XP_022931604.1	1.0e-127	94.02	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Cucurbita moschata]	[more]
XP_023007253.1	5.0e-127	94.02	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Cucurbita maxima]	[more]

BLAST of Carg17896 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23040.1	3.2e-96	76.79	Protein of unknown function (DUF3353)	[more]
AT3G51140.1	3.6e-31	35.46	Protein of unknown function (DUF3353)	[more]
AT2G20920.1	2.5e-08	27.91	Protein of unknown function (DUF3353)	[more]

BLAST of Carg17896 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FN50\|CPP1_ARATH	5.8e-95	76.79	Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
sp\|G5DBJ0\|CPP1_NICBE	1.8e-91	67.06	Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana O...	[more]

BLAST of Carg17896 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BVF6\|A0A1S3BVF6_CUCME	2.9e-123	90.84	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LUP3\|A0A0A0LUP3_CUCSA	1.7e-115	93.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014380 PE=4 SV=1	[more]
tr\|A0A2I4DGM9\|A0A2I4DGM9_9ROSI	3.6e-102	76.98	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Juglans regia OX=51240 ...	[more]
tr\|W9ST27\|W9ST27_9ROSA	4.5e-100	76.10	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004310 PE=4 SV=1	[more]
tr\|A0A1U8NM96\|A0A1U8NM96_GOSHI	2.2e-99	73.62	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Gossypium hirsutum...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021788	CPP1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17896-RA	Carg17896-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PFAM	PF11833	CPP1-like	coord: 72..250 e-value: 1.5E-59 score: 200.9
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PANTHER	PTHR33372	FAMILY NOT NAMED	coord: 33..251
None	No IPR available	PANTHER	PTHR33372:SF3	PROTEIN CHAPERONE-LIKE PROTEIN OF POR1, CHLOROPLASTIC	coord: 33..251

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17896	Cla019011	Watermelon (97103) v1	carwmB0461
Carg17896	Csa1G014380	Cucumber (Chinese Long) v2	carcuB0494
Carg17896	MELO3C017270	Melon (DHL92) v3.5.1	carmeB0469
Carg17896	ClCG06G015190	Watermelon (Charleston Gray)	carwcgB0451
Carg17896	CSPI01G03000	Wild cucumber (PI 183967)	carcpiB0500
Carg17896	Cucsa.198350	Cucumber (Gy14) v1	carcgyB0534
Carg17896	CmaCh11G002560	Cucurbita maxima (Rimu)	carcmaB0644
Carg17896	CmaCh10G002640	Cucurbita maxima (Rimu)	carcmaB0640
Carg17896	CmoCh11G002620	Cucurbita moschata (Rifu)	carcmoB0625
Carg17896	CmoCh10G002810	Cucurbita moschata (Rifu)	carcmoB0622
Carg17896	Lsi06G013670	Bottle gourd (USVL1VR-Ls)	carlsiB420
Carg17896	Cp4.1LG18g07400	Cucurbita pepo (Zucchini)	carcpeB0646
Carg17896	Cp4.1LG04g14260	Cucurbita pepo (Zucchini)	carcpeB0650
Carg17896	CsGy1G003010	Cucumber (Gy14) v2	carcgybB0471
Carg17896	MELO3C017270.2	Melon (DHL92) v3.6.1	carmedB0472
Carg17896	CsaV3_1G003070	Cucumber (Chinese Long) v3	carcucB0497
Carg17896	Cla97C06G124710	Watermelon (97103) v2	carwmbB0487
Carg17896	Bhi02G000022	Wax gourd	carwgoB0563

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17896	Carg09154	Silver-seed gourd	carcarB458

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17896	Cucurbita maxima (Rimu)	carcmaB0645
Carg17896	Cucumber (Gy14) v2	carcgybB0473
Carg17896	Cucumber (Gy14) v1	carcgyB0535
Carg17896	Silver-seed gourd	carcarB410
Carg17896	Silver-seed gourd	carcarB459
Carg17896	Silver-seed gourd	carcarB461
Carg17896	Silver-seed gourd	carcarB462
Carg17896	Cucumber (Gy14) v2	carcgybB0468
Carg17896	Cucumber (Gy14) v2	carcgybB0469
Carg17896	Cucumber (Gy14) v1	carcgyB0530
Carg17896	Cucumber (Gy14) v1	carcgyB0532
Carg17896	Cucurbita maxima (Rimu)	carcmaB0641
Carg17896	Cucurbita moschata (Rifu)	carcmoB0627
Carg17896	Cucurbita moschata (Rifu)	carcmoB0623
Carg17896	Cucurbita moschata (Rifu)	carcmoB0626
Carg17896	Cucurbita pepo (Zucchini)	carcpeB0645
Carg17896	Cucurbita pepo (Zucchini)	carcpeB0647
Carg17896	Cucurbita pepo (Zucchini)	carcpeB0651
Carg17896	Wild cucumber (PI 183967)	carcpiB0497
Carg17896	Wild cucumber (PI 183967)	carcpiB0498
Carg17896	Wild cucumber (PI 183967)	carcpiB0502
Carg17896	Cucumber (Chinese Long) v2	carcuB0491
Carg17896	Cucumber (Chinese Long) v2	carcuB0492
Carg17896	Cucumber (Chinese Long) v2	carcuB0496
Carg17896	Cucumber (Chinese Long) v3	carcucB0494
Carg17896	Cucumber (Chinese Long) v3	carcucB0495
Carg17896	Cucumber (Chinese Long) v3	carcucB0499
Carg17896	Bottle gourd (USVL1VR-Ls)	carlsiB417
Carg17896	Melon (DHL92) v3.5.1	carmeB0467
Carg17896	Melon (DHL92) v3.6.1	carmedB0470
Carg17896	Watermelon (Charleston Gray)	carwcgB0449
Carg17896	Watermelon (97103) v1	carwmB0459
Carg17896	Watermelon (97103) v2	carwmbB0484
Carg17896	Watermelon (97103) v2	carwmbB0485
Carg17896	Wax gourd	carwgoB0560
Carg17896	Wax gourd	carwgoB0561