Carg17591 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17591
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Thioredoxin-like protein 1
Location	Cucurbita_argyrosperma_scaffold_183 : 477734 .. 480791 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTGAGTGATGCAGGTTTTTGAGGTGTTTGATTCACAAATTCTTGTTTAAGTTTCGAGAAATGATGAAAGATGATGTTAATACTTGAATCTAGCGAATGAGTTTTGAGTACAGGAGTATCAGGATTTTATTGCTTTAAGCTTAGTTTTCTTTCATACTGATGCTTCGTTTTTAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGGTGCTGTTTGTTATATTTTGACCAGAGATGTTTATCAGTTGCATGTACTTCGTTGTAGTTTCTTGAATTTCTTTACATGGCTGAATAATTCGTTTCTCGATTCAATGAAGTTAAAGATGGTGCTGAGTTAGACTAGCTTTCTTGCAGAATATAATTTCCTTCTCTCTTTTCTTCTAATTGTAAATCTTTCGAGTTTAATATCTTCTTGAGACTTTATGTGGGAATGGTGTATACTTAATGAGTTCTCAATATGTGTCTAATAAATATTGGAAGTGTATTGACTTTGTACCGCTCGTATTTTTTAACACATATTTATTGTGCTAACAAGTGTCCAATATATGTTCAATAAGTGTTAGTGTCAAAGTATCCAACACTTGTCGGGCACGGACGGACACTCTTGCCACATTAAAATGTCTGTGCTTCTTAAGGGTATATGGAAGTTGGTGAATATGAACTTAGCTCTCTTAGGCCAAGTGGCTATGCCGCTTTCTTTTAGAGTCTTATTCTTTATGGCGTATGATTATTGTTAGCATGACTGTCACTTCAGGGGTGGGACACATATGTGGTCTCTGAACTAAAGACATATTAAAAGTCCTTGGAAAACCATTTTCTATTGCATACCGAGCTTTATCAACTACATTAAATTCTCTGTGGGGAGCAGGGCTTGCATTCGTTTATGGGAAGAATTTTGGGCTGGTATCAACGTCTTTCAAAATTCTCTTCTCGTCTTTATAATATTACCCTGTGAAAGAGATGTTGGTCAATTCATTGATAATTCGTACTTCCTTCCACTTGATTTAGAATATGAAGTCGGGTTTTCTATTGCATACTTCCTTCCACTTGATTTTCATTTTCATTTTCATTTTCATTTTAGAAGATATCTTTGTGATATTGAGTCGAGATTTATCCAAATATTATCTCCATTTTTAGTAATACGCATAGTTAGGTTCTTCAGCCATCTGGTATCTTTTGTTTTTTTACCCATCTCCCCACCCCCCTCTTTCACTCTGGATTTTGAAGGCTAAAATCTAAAAAAAGATCAGGTTTTTCACCTGGCTGGTTTCTTTGGGAAGATTAGACACACCATAGACTTTGTCTAGAAGCCTTCATCTTTGTCTGGAAAAAGATCATTTGCTATAGAGATGTCACCTTGTCGTGAAACTTTAGAGTTGAAGCAATTTTCTCACTATTTTGTTGAATCTATGGCTTGCGAGAAATAAAGTATTTTGAGGGTACCGAAGTCTTGGAAGAGGTTTGGAGTTTGGAAAATTTTAATCTCTTGTGGCGTTCTCTTTATCTTTTTATTCTTAACCATTGAACCAACCTACTGTAATTTTGTTTCAAGTTTTTGTTTATAGACTGCTCATCTGTTTGGGTCTATTTTTTAGGCCACTCCTTTTGTGTATTCATTCAGCTTATTAAAAGTTGATGTATCATATGAAGCAAGAGGCTAAAATACCATTTTTGGTCCTTGTAATTTGACACTTGTTCCATTTTAGTTCCTATACTTTCGAATGTAGAATTAATTTAGTCATTATTAATTTGAATGGTACAATAATAATTTTTATTAGAGGAAAGACATTGTGAGTATCTTTTCAACATTTATAGAGGTAGGGCTAATAGATACAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAAGTTAATCATGAACAATATAGGGACTAATTTTAAGATTACTAGAAGACGGAGACTACATTTTTTACATTTGAAAGTACATAAGACCAAAATAAAACAAGTATCAAAGTCTGGGGTCAAAATGGTATTTTTGACCTAAAAGAAAATTTTCATGATAAAATAGGCATCTCTTTTTCCCTGTAATTTCTTCCCAACAGCCAATGGAAATTATTATACCGAGGGTTTGAAGCAACTTTTATCTTAAAATAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAGTATTGCTTTTCATGTATAACTATAGTTCATCTAATCTATTGGCATATTTTTTTTAACATGTCTTACATGTCCAACGTGGCCAATGAGGGGTATGATCATTCCATTTTGAAGTCTTACTATTGTGATTTTTTTATTATTTTTTTTTTTTTTTATTTTTTATTTGTTCTTGATGTCGTCTTTTTTTTTTTGTTTAGTGTTTTTATTTATTTCTTATTGAGTGCTTTTGTGTACACTAGAGAAGTTGGCATGCTTTTTGAAAGAAGAATAGACTGTTTTTCGAATGATAGATTTCGGTTAGACTATTTCGGATTTATATAATATCCACCATTAAGTTGTTGTTATTTGTATTGGTGGGTTTTTATTTTCAGAGTGGGTGGCGCTTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGGTTTTTTTTTTTAGCAAGGCTGGGTGCTGGATTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTACGAATTGCTCGCTTTTGTTCTGCATTGACATATTAG

mRNA sequence

ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAAGTGGGTGGCGCTTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGCAAGGCTGGGTGCTGGATTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTACGAATTGCTCGCTTTTGTTCTGCATTGACATATTAG

Coding sequence (CDS)

ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAAGTGGGTGGCGCTTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGCAAGGCTGGGTGCTGGATTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTACGAATTGCTCGCTTTTGTTCTGCATTGACATATTAG

Protein sequence

MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIFLLDISISSGWRFIWESSQASFVMQECFEGGLWFGQWGLCCGGQGWVLDCSYGRDEREVLSLSPCLAGIVQPPARSWLVAREIWLRIARFCSALTY

Homology

[Close]

BLAST of Carg17591 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.3 bits (438), Expect = 7.9e-40
Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
          MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI
Sbjct: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61 LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
          LMYIPFNQVIKLHSLVIKGPEEEG  ++  F
Sbjct: 61 LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLF 91

[Close]

BLAST of Carg17591 vs. NCBI nr
Match: XP_022965977.1 (PITH domain-containing protein At3g04780-like [Cucurbita maxima])

HSP 1 Score: 169.9 bits (429), Expect = 8.8e-39
Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
          MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI
Sbjct: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61 LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
          LMYIPFNQVIKLHSLVIKG EEEG  ++  F
Sbjct: 61 LMYIPFNQVIKLHSLVIKGHEEEGPRTVKLF 91

[Close]

BLAST of Carg17591 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
          MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1  MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61 LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
          L+YIPFNQVIKLHSLVIKGPEEEG  ++  F
Sbjct: 61 LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLF 91

[Close]

BLAST of Carg17591 vs. NCBI nr
Match: XP_008455826.1 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo])

HSP 1 Score: 166.4 bits (420), Expect = 9.7e-38
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
          MAAASATAI+RNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1  MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61 LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
          L+YIPFNQV+KLHSLVIKGPEEEG  ++  F
Sbjct: 61 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLF 91

[Close]

BLAST of Carg17591 vs. NCBI nr
Match: XP_004139228.2 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis sativus] >KGN60819.1 hypothetical protein Csa_2G011520 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 10  HRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQV 69
           +RNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQV
Sbjct: 19  NRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV 78

Query: 70  IKLHSLVIKGPEEEGKYSITPF 92
           +KLHSLVIKGPEEEG  ++  F
Sbjct: 79  VKLHSLVIKGPEEEGPRTVKLF 100

[Close]

BLAST of Carg17591 vs. TAIR10
Match: AT3G04780.1 (Protein of unknown function (DUF1000))

HSP 1 Score: 120.9 bits (302), Expect = 8.5e-28
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           M+A SA+ I + QVDL DFI+WSG+ECLNQ+ SH+  NAL Q  R+++ L LESDADEQ+
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIF 100
           L+YIPFNQVIKLHS  IKGPEEEG  ++  F +     F
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCF 99

[Close]

BLAST of Carg17591 vs. Swiss-Prot
Match: sp|Q9SQZ9|PITH1_ARATH (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           M+A SA+ I + QVDL DFI+WSG+ECLNQ+ SH+  NAL Q  R+++ L LESDADEQ+
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIF 100
           L+YIPFNQVIKLHS  IKGPEEEG  ++  F +     F
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCF 99

[Close]

BLAST of Carg17591 vs. Swiss-Prot
Match: sp|O43396|TXNL1_HUMAN (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 7   TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPF 66
           T I +  +DL  FIN +G ECLN++  H F N     C   D+  LESD DEQ+L+ + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDTTFLESDCDEQLLITVAF 176

Query: 67  NQVIKLHSLVIKGPEE-EGKYSITPFIS 94
           NQ +KL+S+  +GP+  +G   +  FI+
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFIN 199

[Close]

BLAST of Carg17591 vs. Swiss-Prot
Match: sp|Q920J4|TXNL1_RAT (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 65.9 bits (159), Expect = 5.8e-10
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 7   TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPF 66
           T I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQ+L+ + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDLSFLESDCDEQLLITVAF 176

Query: 67  NQVIKLHSLVIKGPEE-EGKYSITPFIS 94
           NQ +KL+S+  +GP+  +G   +  FI+
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFIN 199

[Close]

BLAST of Carg17591 vs. Swiss-Prot
Match: sp|Q8CDN6|TXNL1_MOUSE (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 65.1 bits (157), Expect = 9.9e-10
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 9   IHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQ 68
           I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQ+L+ + FNQ
Sbjct: 119 IPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDMSFLESDCDEQLLITVAFNQ 178

Query: 69  VIKLHSLVIKGPEE-EGKYSITPFIS 94
            +KL+S+  +GP+  +G   +  FI+
Sbjct: 179 PVKLYSMKFQGPDNGQGPKYVKIFIN 199

[Close]

BLAST of Carg17591 vs. Swiss-Prot
Match: sp|Q9USR1|TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.0e-07
Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 3   AASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILM 62
           A+S++A  +    L   I    +ECLNQ   H   +A +     N S  LESD DEQ+++
Sbjct: 116 ASSSSAPVKGFASLQGCIENPQLECLNQQDDHDLKSAFN----SNPSSFLESDVDEQLMI 175

Query: 63  YIPFNQVIKLHSLVI---KGPEEEGKYSITPFIS 94
           YIPF +V+K+HS+ I   KG       +I  +I+
Sbjct: 176 YIPFLEVVKVHSIAITPVKGETSSAPKTIKLYIN 205

[Close]

BLAST of Carg17591 vs. TrEMBL
Match: tr|A0A1S3C1X8|A0A1S3C1X8_CUCME (PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.4e-38
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
          MAAASATAI+RNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1  MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61 LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
          L+YIPFNQV+KLHSLVIKGPEEEG  ++  F
Sbjct: 61 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLF 91

[Close]

BLAST of Carg17591 vs. TrEMBL
Match: tr|A0A0A0LIE3|A0A0A0LIE3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011520 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 10  HRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQV 69
           +RNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQV
Sbjct: 19  NRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV 78

Query: 70  IKLHSLVIKGPEEEGKYSITPF 92
           +KLHSLVIKGPEEEG  ++  F
Sbjct: 79  VKLHSLVIKGPEEEGPRTVKLF 100

[Close]

BLAST of Carg17591 vs. TrEMBL
Match: tr|A0A059D3U4|A0A059D3U4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02113 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           M+A SA+AI RNQVDLSDFI+WSG+ECLNQ+ SH+  NAL Q  R++D LLLESDADEQ+
Sbjct: 58  MSAESASAIQRNQVDLSDFIDWSGVECLNQSASHSLPNALKQGYREDDGLLLESDADEQL 117

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
           LMYIPF QV+KL++LV+KGPEEEG  ++  F
Sbjct: 118 LMYIPFTQVVKLYALVVKGPEEEGPKTVKLF 148

[Close]

BLAST of Carg17591 vs. TrEMBL
Match: tr|A0A059D3D9|A0A059D3D9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02113 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           M+A SA+AI RNQVDLSDFI+WSG+ECLNQ+ SH+  NAL Q  R++D LLLESDADEQ+
Sbjct: 58  MSAESASAIQRNQVDLSDFIDWSGVECLNQSASHSLPNALKQGYREDDGLLLESDADEQL 117

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
           LMYIPF QV+KL++LV+KGPEEEG  ++  F
Sbjct: 118 LMYIPFTQVVKLYALVVKGPEEEGPKTVKLF 148

[Close]

BLAST of Carg17591 vs. TrEMBL
Match: tr|B9REQ3|B9REQ3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1427670 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.7e-27
Identity = 62/91 (68.13%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 1  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
          M+A SATAI R+QVDL DF++WSG+ECLNQN SH+ +NAL Q  R++D L LESDADEQ+
Sbjct: 1  MSAESATAIQRSQVDLVDFVDWSGVECLNQNPSHSLSNALKQGYREDDGLNLESDADEQL 60

Query: 61 LMYIPFNQVIKLHSLVIKGPEEEGKYSITPF 92
          L+YIPF QVIKLHS+VIKGPEEEG  ++  F
Sbjct: 61 LIYIPFTQVIKLHSIVIKGPEEEGPKTVKLF 91

The following BLAST results are available for this feature:

BLAST of Carg17591 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937687.1	7.9e-40	93.41	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129...	[more]
XP_022965977.1	8.8e-39	92.31	PITH domain-containing protein At3g04780-like [Cucurbita maxima]	[more]
XP_022946891.1	1.1e-38	89.01	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892...	[more]
XP_008455826.1	9.7e-38	86.81	PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo]	[more]
XP_004139228.2	1.9e-33	85.37	PREDICTED: PITH domain-containing protein At3g04780 [Cucumis sativus] >KGN60819....	[more]

BLAST of Carg17591 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04780.1	8.5e-28	59.60	Protein of unknown function (DUF1000)	[more]

BLAST of Carg17591 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SQZ9\|PITH1_ARATH	1.5e-26	59.60	PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
sp\|O43396\|TXNL1_HUMAN	2.0e-10	40.91	Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3	[more]
sp\|Q920J4\|TXNL1_RAT	5.8e-10	40.91	Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3	[more]
sp\|Q8CDN6\|TXNL1_MOUSE	9.9e-10	40.70	Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3	[more]
sp\|Q9USR1\|TXL1_SCHPO	6.0e-07	36.17	Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of Carg17591 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1X8\|A0A1S3C1X8_CUCME	6.4e-38	86.81	PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923...	[more]
tr\|A0A0A0LIE3\|A0A0A0LIE3_CUCSA	1.2e-33	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011520 PE=4 SV=1	[more]
tr\|A0A059D3U4\|A0A059D3U4_EUCGR	2.3e-27	68.13	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02113 PE=4 SV...	[more]
tr\|A0A059D3D9\|A0A059D3D9_EUCGR	2.3e-27	68.13	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02113 PE=4 SV...	[more]
tr\|B9REQ3\|B9REQ3_RICCO	8.7e-27	68.13	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1427670 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like_sf
IPR010400	PITH_dom
IPR037047	PITH_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17591-RA	Carg17591-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037047	PITH domain superfamily	GENE3D	G3DSA:2.60.120.470		coord: 2..99 e-value: 1.1E-22 score: 82.4
IPR010400	PITH domain	PFAM	PF06201	PITH	coord: 16..81 e-value: 2.7E-15 score: 56.8
IPR010400	PITH domain	PROSITE	PS51532	PITH	coord: 5..194 score: 16.758
None	No IPR available	PANTHER	PTHR12175	AD039 HT014 THIOREDOXIN FAMILY TRP26	coord: 3..84
None	No IPR available	PANTHER	PTHR12175:SF5	SUBFAMILY NOT NAMED	coord: 3..84
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	SSF49785	Galactose-binding domain-like	coord: 7..87

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17591	Cla019815	Watermelon (97103) v1	carwmB0714
Carg17591	Csa2G011520	Cucumber (Chinese Long) v2	carcuB0735
Carg17591	MELO3C004371	Melon (DHL92) v3.5.1	carmeB0711
Carg17591	ClCG02G016540	Watermelon (Charleston Gray)	carwcgB0692
Carg17591	CSPI02G03090	Wild cucumber (PI 183967)	carcpiB0751
Carg17591	Cucsa.133360	Cucumber (Gy14) v1	carcgyB0804
Carg17591	CmaCh05G011940	Cucurbita maxima (Rimu)	carcmaB1001
Carg17591	CmaCh12G011150	Cucurbita maxima (Rimu)	carcmaB1000
Carg17591	CmoCh12G011330	Cucurbita moschata (Rifu)	carcmoB0973
Carg17591	CmoCh05G012170	Cucurbita moschata (Rifu)	carcmoB0974
Carg17591	Lsi11G004580	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17591	Cp4.1LG07g09500	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17591	Cp4.1LG11g09750	Cucurbita pepo (Zucchini)	carcpeB1005
Carg17591	Cp4.1LG00g04120	Cucurbita pepo (Zucchini)	carcpeB1004
Carg17591	CsGy2G003200	Cucumber (Gy14) v2	carcgybB0713
Carg17591	MELO3C004371.2	Melon (DHL92) v3.6.1	carmedB0724
Carg17591	CsaV3_2G004230	Cucumber (Chinese Long) v3	carcucB0754
Carg17591	Cla97C02G042320	Watermelon (97103) v2	carwmbB0746
Carg17591	Bhi06G001511	Wax gourd	carwgoB0841

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17591	Carg23444	Silver-seed gourd	carcarB325

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17591	Watermelon (97103) v2	carwmbB0747
Carg17591	Cucurbita pepo (Zucchini)	carcpeB1003