Carg17553 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17553
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GPI-anchored protein-like protein
Location	Cucurbita_argyrosperma_scaffold_183 : 187339 .. 191260 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGGTTCGAAATAATCCTTTGTTCCACTGTCTGGGTCTATTTACAACTAGCCAATTAAGAATTCTCATATGTACGAGTACTAGCAAGTGCATCTTTGATGCAGTCCTCGATTCTCCCAAAAGGTTACAATTACAAAGAGCAAACATATTAATGGCGAGTTACACATTTTTGCTATTCTACTAATACATGTACTTGCTCTACTATTCCGTTGAAGCCTGCCTAAGGAAGTCATCTTTCTAGGCAAATTCATCAAAGAAATCAAAGAAATATAAAGTGTGAATAAAGTCGGTCAAACTTACGATTCTTTTCATAATGATGAATGGCCTTCTTTTTCATGTCTTCTGTGATGTCCCACGTTGGTTGGAGAGGAGAACAAACCACCATTTATAAGGGTGTAGAAACCTTCCCCTAGCAGACGTGTTTTGAAGCCTTGAAGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCAATGGATCTGAGGCATTACAAATGGTATCAGAGCCAGACACTGGACAATGTGCCAGCCTTCTCGCTGTTCCCCAAAGGGGGTAGACACAAGCTAGCGGTGGATCTGGGGCGTTACAAATGGTATCGAGCCAGACACTGGACAATGTGTCAGCCTTTTCGCTGTTCCCTGAAGGGGGTAGACACAAGGCGGTGTGCCAGTAAAGACGCTGGCCCCAAAGAGGGGTGGATTTAGGGGCAGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTTTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATACCTGCTAGCAGTGGATCTAGGGCGTTACAAATGGTATCAGAGCAAAACACTGGACAATGTGCCAGCCTTCTCGCTGTTCCCCGAAGGTGGGTAGACACGAGGTGGTGTGCCAGTAAAGACGCTGGGTCTCGAAGGGGGGTGGTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGGCGTTACACATCTTTAATACAGTGAAACTTCAATACCTGTCTACCTGCAGTTGATTTAGAAGAGCTTTTCAAAGGCTTTAACATCTACAAAAACTCACAAAGCCAGTTGTATCTCAACAAAAACTCCAAAGCACAATGTATAGCAGAACAAATCGCGAAGAAATTGTACAACCAACTGCCTTGCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTTCACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCAAACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGAAGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGGTTTATTTCTTGGGATTTATTGTTTTCGGGGTCATTTCTTTGTTTTGGTGAGGATCAATAGGGCTTGTTTCCTTTCGTCTCCTACATGTTACGATTTACGTTCAATGAACGTCTCAATGAGTCATGTAATGCAGTACACCTTCACTTTATCCAATATGGAACAGCTTGAAGAATTTATTTCTTTATCTTTTTCCTTTCTATTCTATAACTGTACATCATTCGGTCAACTTACTAAATAGCCCAAGCCTACCGCTAGCAGATATTGTTCTCTTTGGGTTTTCCCTTTCGAGTTTTCCCTCAAGGTTTTAAAACATGTATGCTAAGGAGAGGTTTCCACACCCTTATAAGTAATGCTTTGTTCACCTCTCCAACCGAGGTGGATCTCACAATCCACCCCCTAGAGGGCCCAACGTCCTCCCTGGCACACCGTCTAGTGTTTGGCTCTGATACCATTTGTAATAGTCCAACCCCACCGCTAGTAGATATTGTCCTCTTTGGACTTTCCCTTTCGAGTTTTCCCTCAAGGTTTTAAAACATGTCTGCTAGGAAGAGATTTCCACACCCTTATAAGTAATGCTTCATTCACCTCTCCAACCGATGTGGATCTCACAATCCCCCCTAGAGGGCCCAACGTCCTCCCTGGCACACCGTCCAGTGTTTGGCTCTGATACCATTTGTAATAGTCCAACCCAACTGCTAGTAGATATTATCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAAGTTTTAAAACGTGTCTGCTAGGGAGAAGTTTCCATACACTTATAAGGAATGTTTCGTTCCCCTCTCCAGCAGCCTAATAGGATCTGCTTTAAATCCCAAGAAAAACATCTTATGATAGAAAGCTGAACCAGTGCCCATATCGAGGAAGGAAGTAAAAAGTGAAAAAGTAAACAAAAGAAGAAACCCCAACTTCAGAAAAGAACCTGCTGAGCAGCCAAAGGGAAATAAATAAAACACATGGAAGGAAACACATGAAGAATCCTCCGGTACGATCATAAAACGATACTTTAACGAAGCTTAGATACCGATAATCCCCCAAAGAAACAACCAGGAAGATCAAAATCATCAAAAGGTAACGAAATCCGAAGCTAAAATATGAATGCCTATTGATAGAAATCAGAACTACAACATGTTTTGCTTGCTTGTGAATTGTGCATCACCTAAACTGTTTGGAATATTGTGCATAGAATAAATGAAAATGAAACATGTTGAGAAAAAGAAACTCAACACCCTTCCTTAATCAAATGAGCAAGAATATATCCTAGCAGGTCCACATCTACCCAGTTCTTTGGTAGACGAACACGACTCTCCACAATGGTACGATATTGTCCACTTTGAGCATAAACTCTCATGACTTTGCTTTGGGCTTCTCCAAAACGCCTCAAACCAATGGAGAGAGTATTCCTCACTTATAAACCCATGATCATTTCCTAAATTAGCCAATGTGGGACTTTCATCCAACACCTCCCCTCGAACAAAGAACGCCTCCCCTTAATCGAAGCTCGACTCCTTTTCTTTTGGAGTCATTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTTAGGACATGACTCTAATACCATGTTAGATGAACACGATTCTCCACAATGGTATGATATTATCCATTTTGAGCATAAGCTCTCGTGGCTTTACTTCGGGCTTCCCCACAACGCCTCAAACCAATGGAGAGAGTATTCTTTATTTATAAACCCATGATCATTCCCTAAATTAGCTGATGTGGGACTTTCATCATCCAACATTCATAACACAGCTGTAGAGAATAGTTCAGAAATGTCTTTGCAATTCCAAATCTTGAGACAATTTTAGAACTGAGGTAGGTGGGATTTCATACCTATACGCCTTTACAGGAATGACTAATGAACACATAAAGTGTAATATGGAAAGCTTATACCCTTCACGAATAAAGCAAAGCAATATTGCTAGAACAAGCAAATTCTAAAGAGATCAGAATGGAAGAACCCAAAAAAAACGATAAAAAGAGACAAGAACCTCGTATTCTTTGTCCAAGCAAGCCTGATGCCTTCTCCTTGACCCTCCTGCAGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAG

mRNA sequence

ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTTCACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCAAACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGAAGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAG

Coding sequence (CDS)

ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTTCACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCAAACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGAAGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAG

Protein sequence

MHSSILSRGHNYRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLHNGLALPQTWLLPLQCCPWLAAIVVLSTWRWT

Homology

[Close]

BLAST of Carg17553 vs. NCBI nr
Match: XP_022938135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata] >XP_023537309.1 uncharacterized GPI-anchored protein At3g06035-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 2.3e-53
Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  SRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA
Sbjct: 67  YNQLPCSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLH 127
           GCKHS ASKYLGN TYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGR++
Sbjct: 127 GCKHSQASKYLGNTTYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRVY 181

[Close]

BLAST of Carg17553 vs. NCBI nr
Match: XP_022965956.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima] >XP_022965957.1 uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  SRTI+GDALLPSNQSQLPLFTHYS KCQVNLNHTLDAVILPIYVPNSE  LVLA
Sbjct: 67  YNQLPCSRTINGDALLPSNQSQLPLFTHYSSKCQVNLNHTLDAVILPIYVPNSEDGLVLA 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLH 127
           GCKHS ASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVS+IQNIGR++
Sbjct: 127 GCKHSQASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSQIQNIGRVY 181

[Close]

BLAST of Carg17553 vs. NCBI nr
Match: KGN60893.1 (hypothetical protein Csa_2G021640 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 9.6e-36
Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  S  I+GD LLP NQSQLP+ +HYSRKC+VNLNHT+D VILP+YVPNS  +L+L 
Sbjct: 67  YNKLPCSAAIEGDVLLPFNQSQLPM-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLT 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIG 124
            C HS A KYL NATYTRVGLA N+DCLVIALGTDA+ GSYSAG+S + +IG
Sbjct: 127 NCTHSQAPKYLDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIG 177

[Close]

BLAST of Carg17553 vs. NCBI nr
Match: XP_008454795.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like isoform X1 [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L 
Sbjct: 67  YSQLPCSAAIEGDVLLPSNQSQLPLFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLT 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRI 120
            C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GSYSAG+S +
Sbjct: 127 NCTHSQAPKYLDNATYTSVGLATNEDCLVIALGTDAISGSYSAGLSLV 174

[Close]

BLAST of Carg17553 vs. NCBI nr
Match: ABR67420.1 (GPI-anchored protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L 
Sbjct: 67  YSQLPCSAAIEGDVLLPSNQSQLPLFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLT 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRI 120
            C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GSYSAG+S +
Sbjct: 127 NCTHSQAPKYLDNATYTSVGLATNEDCLVIALGTDAISGSYSAGLSLV 174

[Close]

BLAST of Carg17553 vs. TAIR10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 23  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYL 82
           G A +P  + Q   +     KC +N++ T D  I+P  VP  E+ LVL     S  S  L
Sbjct: 75  GSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSL 134

Query: 83  GNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLHNGLAL 132
            ++ +T +G+ K  D +V+ L T+   GSYS      Q       G+ L
Sbjct: 135 NDSKFTGIGIGKEDDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGL 183

[Close]

BLAST of Carg17553 vs. TAIR10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 58.2 bits (139), Expect = 5.4e-09
Identity = 28/86 (32.56%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 35  PLFTHYS---RKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVG 94
           P  T+Y     +C+++ N T D +ILP+ +PN    L L     +  ++YL ++ Y   G
Sbjct: 89  PRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNYTQTGYARYLNDSRYVGAG 148

Query: 95  LAKNKDCLVIALGTDALGGSYSAGVS 118
           +   K+ +V+ L T   GGS++AGV+
Sbjct: 149 VGSEKEWMVVVLTTSTPGGSFTAGVA 174

[Close]

BLAST of Carg17553 vs. TAIR10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05
Identity = 29/93 (31.18%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 23  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYL 82
           G A +P     +P F +   KC++N N T D +IL +  P   +   L+   +   +K L
Sbjct: 76  GSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANV-LTKNL 135

Query: 83  GNATYTRVGLAKNKD--CLVIALGTDALGGSYS 114
            ++ +T  G+  + D   LV  L T+  GGSYS
Sbjct: 136 NDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYS 167

[Close]

BLAST of Carg17553 vs. Swiss-Prot
Match: sp|Q84MC0|UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 23  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYL 82
           G A +P  + Q   +     KC +N++ T D  I+P  VP  E+ LVL     S  S  L
Sbjct: 75  GSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSL 134

Query: 83  GNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLHNGLAL 132
            ++ +T +G+ K  D +V+ L T+   GSYS      Q       G+ L
Sbjct: 135 NDSKFTGIGIGKEDDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGL 183

[Close]

BLAST of Carg17553 vs. TrEMBL
Match: tr|A0A0A0LGC0|A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021640 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-36
Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  S  I+GD LLP NQSQLP+ +HYSRKC+VNLNHT+D VILP+YVPNS  +L+L 
Sbjct: 67  YNKLPCSAAIEGDVLLPFNQSQLPM-SHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLT 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIG 124
            C HS A KYL NATYTRVGLA N+DCLVIALGTDA+ GSYSAG+S + +IG
Sbjct: 127 NCTHSQAPKYLDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIG 177

[Close]

BLAST of Carg17553 vs. TrEMBL
Match: tr|A0A1S3BZI4|A0A1S3BZI4_CUCME (uncharacterized GPI-anchored protein At3g06035-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495110 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-36
Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L 
Sbjct: 67  YSQLPCSAAIEGDVLLPSNQSQLPLFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLT 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRI 120
            C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GSYSAG+S +
Sbjct: 127 NCTHSQAPKYLDNATYTSVGLATNEDCLVIALGTDAISGSYSAGLSLV 174

[Close]

BLAST of Carg17553 vs. TrEMBL
Match: tr|A6YTC6|A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-36
Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 12  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLA 71
           Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L 
Sbjct: 67  YSQLPCSAAIEGDVLLPSNQSQLPLFTEYSRKCEVNLNHTVDGVILPVHVPNSADKLMLT 126

Query: 72  GCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRI 120
            C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GSYSAG+S +
Sbjct: 127 NCTHSQAPKYLDNATYTSVGLATNEDCLVIALGTDAISGSYSAGLSLV 174

[Close]

BLAST of Carg17553 vs. TrEMBL
Match: tr|M5W0Y4|M5W0Y4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G327200 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 22  DGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKY 81
           D  A+ P N  + P F    +KC +++N T D +ILP+ VPN + +LV+    H+  +KY
Sbjct: 70  DDYAIEPGNGPKFPKFDKLIKKCHIDINTTTDGIILPVCVPNWDPDLVIKNYTHTQYAKY 129

Query: 82  LGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLHNGLALPQTWLLPLQC 141
           L  + YT  G+    D +V+ L TD   GS+S G   +  IG +H  +A+     L L C
Sbjct: 130 LNGSKYTGAGVGTEDDWVVVVLSTDTESGSFS-GAPSLAAIGMVHYMMAMLLGLFLILLC 188

[Close]

BLAST of Carg17553 vs. TrEMBL
Match: tr|A0A2P5DSY2|A0A2P5DSY2_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_034360 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 23  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYL 82
           G  ++PS Q+QL  +    +KC +N+N T D VILP+ VP     LVL    H+  +KYL
Sbjct: 76  GPNIVPSTQTQLSDYPKLLKKCGINVNTTTDGVILPVCVPKLVPTLVLTNYTHTSYAKYL 135

Query: 83  GNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIG 124
            N+ YT  G+    D +V+ L T    GS+S  VS +  +G
Sbjct: 136 NNSKYTGAGVGSEDDWMVVVLSTSTTAGSFSRAVSLVSQMG 176

The following BLAST results are available for this feature:

BLAST of Carg17553 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938135.1	2.3e-53	93.04	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata] >XP_023...	[more]
XP_022965956.1	1.4e-50	89.57	uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima] >XP_02296...	[more]
KGN60893.1	9.6e-36	68.75	hypothetical protein Csa_2G021640 [Cucumis sativus]	[more]
XP_008454795.1	1.3e-35	70.37	PREDICTED: uncharacterized GPI-anchored protein At3g06035-like isoform X1 [Cucum...	[more]
ABR67420.1	1.3e-35	70.37	GPI-anchored protein-like protein [Cucumis melo subsp. melo]	[more]

BLAST of Carg17553 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06035.1	1.7e-10	31.19	Glycoprotein membrane precursor GPI-anchored	[more]
AT1G54860.1	5.4e-09	32.56	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	6.2e-05	31.18	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of Carg17553 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84MC0\|UGPI4_ARATH	3.1e-09	31.19	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg17553 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGC0\|A0A0A0LGC0_CUCSA	6.3e-36	68.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021640 PE=4 SV=1	[more]
tr\|A0A1S3BZI4\|A0A1S3BZI4_CUCME	8.3e-36	70.37	uncharacterized GPI-anchored protein At3g06035-like isoform X1 OS=Cucumis melo O...	[more]
tr\|A6YTC6\|A6YTC6_CUCME	8.3e-36	70.37	GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=...	[more]
tr\|M5W0Y4\|M5W0Y4_PRUPE	2.2e-12	35.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G327200 PE=4 SV=1	[more]
tr\|A0A2P5DSY2\|A0A2P5DSY2_PARAD	2.2e-12	38.61	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_034360 PE...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17553-RA	Carg17553-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33976:SF2	SUBFAMILY NOT NAMED	coord: 24..119
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 24..119
None	No IPR available	PRODOM	PD208950		coord: 23..131 e-value: 9.0E-10 score: 149.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17553	Cla019880	Watermelon (97103) v1	carwmB0714
Carg17553	Cucsa.091590	Cucumber (Gy14) v1	carcgyB0803
Carg17553	CmoCh12G010960	Cucurbita moschata (Rifu)	carcmoB0973

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17553	Silver-seed gourd	carcarB587
Carg17553	Cucumber (Gy14) v2	carcgybB0713
Carg17553	Cucurbita maxima (Rimu)	carcmaB1000
Carg17553	Cucurbita maxima (Rimu)	carcmaB1001
Carg17553	Cucurbita moschata (Rifu)	carcmoB0974
Carg17553	Cucurbita pepo (Zucchini)	carcpeB1005
Carg17553	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17553	Wild cucumber (PI 183967)	carcpiB0751
Carg17553	Cucumber (Chinese Long) v2	carcuB0735
Carg17553	Cucumber (Chinese Long) v3	carcucB0754
Carg17553	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17553	Melon (DHL92) v3.5.1	carmeB0711
Carg17553	Melon (DHL92) v3.6.1	carmedB0724
Carg17553	Watermelon (Charleston Gray)	carwcgB0692
Carg17553	Watermelon (97103) v2	carwmbB0746
Carg17553	Wax gourd	carwgoB0843