Carg17373 (gene) Silver-seed gourd

Overview
NameCarg17373
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAtaxin-7-like protein 1
LocationCucurbita_argyrosperma_scaffold_092 : 291753 .. 299211 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGAAGAACGGCGACGAAGATTTCTGATTTGGCAGTTGCCAAATGGCACCTCACATTTTCTTCTGTTTGCGCGGCGAAGTGAAGAAAGAGAGAGATTTCAGATAAGAAGACCAAAACCACTGCGAAGGAAAAATTCCCGCCCTCTTTCTCTCTACCTCGCTTCTTCCATAGGGTTTCTTCTCTCTTCTCGGCCATCTCTTCCGCAGCATTTCTCACAAATTTCGCAGAATTCGTTTCTGCAATTGTTTCGAAATTATCTGCTTTCTCGTCGGTTTCTGTGGGCGTGTATGATTGGAGGAGCTTCTCTGCAGGTTAGTCGTGGTTTTCTGCCATTTGAAAGCTCGTTTCGCGGTTTGTTTTCACGAGTTTTGTTTGTTTGTTGTTGTTTTTGGTTTATTTGCTGCTTTTGACTGGCTTTTCTGATGATTCTATTAGTTGTTGTGGTTTATTATGTTGCCTTGTTGTGAAATTGAGGTTGTGGTGCTTGTGTTTGTGTCGTTTTATGTAAAGTTGAACAAGTCGCCATTCTCCCTTGGTGGTCGTTCTACCTAATCGCCCGGAAGTTATATGATTTATGGTACTAAATTAATCAGCTGCTGTTATTTTTTTTTTTTTCTGGCTGAGCACTGTCGATTTTTTTTTAAATATATTTAATTCAATACTCAAGGTTATATTCTGAGTGTAATTTTGAAACGGGGAAAAGATTTCGTTGTTTGTGGCAACGCAGGTGGATTCGTCTCACTGTTTTTTCTTTCTTTCTTTTAGATGTTTTTATTCCCAGCGGTGTAAAACTTCTTCCTTCGCGTACAATACATTTGCATAGTCTCAATGGTTTGCTCAGTTGGAAGTGTGAGAATGGCGGTGATGACAAGGCTTCTGGCTGCTGGGAGTTTCTCGCGAACTATTGCAGGTAAACCGAGAAAGATGAGTTCTGCATTCGTTTTGTTTTTGTTTTTTTAAAAATCGTTCCGCCTACATTTTGAATGTTATTGTGTGACTGTTATAGTCAGAAATAATTATTGGTTAGATTGATTGTTGTAGGAATAATGCCACTTCTGAGTTACATTTCATCTATAATTCAGAGTCATAATTAATGTCCTTTTACTATCGAGCAGAGGAAGCTGGTCATCAGAAATTAGCGTCTGAATTTCTCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGGTTTTTACCTAATCCTACTTCAATTATTGCATGATGTAGCGTTAAATGTTTTATTCTTTGGTTACAAATGAATGTTCTTTTGATCTTAGAATTCATATTTTTTATGGTCCCGTGGGTTGAGTATTAATGTTTTTGTTTGTAGGCATTTAGATTTTTGAAGCAGGTTTGTTTACCTTATTTTCTATTTGCAGATATGCACGTTTTTGGTTTGAAGCCCATGACCGATCCTCTGAATTTGGTAAGGTTTGATGACATTAGTAGTTCGTCTATTTAAAATCTTGTCATTTTTGCATGATGTACGATGAAGCAAAACAATTCTATCAGATGGTCCATTTCAGTTCTTGTTTTATTACTTTGCAGCTTTTGTTACTTTTTTGGATAAGGTGTATTCAGTACATAATAATCTACAATAATATGTTTCCTAATTTATTTGAATTCACATTTTCTCTCCTTTTATTTGATCGTGTAGGTTTGCTGCAATATCTGTAAGAAGCCAGTAAAGGCCAGCCAATACATCATTCATTCTGGTCTGTTATTTATTTATTCATTTTCTTTTTGTGGTGGGGTATTCACTGCTTGTGGTTCTTCATAATCAAATTATGTTTAGTTCCCCTACTTTTTGTTTTGTCTGCTGTTGTTTTAAATGTGCATACTTTTGTTAATGTCTTGAACTTGTTTTTACATCTTAGTCTATCCATGTCAACGTTGACATCGACACTCAGTATAATATAAGTGTTCATGCTTGTATTCTGCTGTACTTAACTTAATGTTAAGGTTAGATCTTGTGTCATAGAATTCGTACCCATTTGAAGAATAATTTGATTTTGAATGTTTCAGAGATTTCATCGATATTTGTTTAGGTTGTAATAAATTCTTTTAAGTTGTATTGTAAAGAATCTAATACTGAGCTTGTTTGTGGTCATTTTGTCATTTGTACTCAAATCCAAATTTTTGGCAATATGAATAATCCAATCATGCCTCTTGTGCTTTTTGATATGTTTTCTCCTGCTTATAATGAATTTTTACCCTATAATTCTTACCTTGTATTACGGTTGAGGTATATTAGTCTTTGTAATTTAGACTTATATTTCGTTAGTTTACACTTGGGTGGACCAATGGAATCTGAAAATTATTGTCAGGGTCCCCATTGTGAAGTCTTGTATGTATCATAGGTTGGACATGATGCTTTCCTGAGTTATCTTCATGTCATTTTACCAGAACTTTGCAGGTCATTAGGTTTGGGACAAGGAGCTATTATGGACCTTGATGGTGGGATGGGCCATAGAAAACACTCGAGGAAGGAGAGCAAAAAGCTATTACCTGCTGATGCTAGTATCCTTCCATGTCACATTTATTTCCTGCTTCTAATTGATGAACCTCTCTCTTTTGGCCTTCCTGTTATCCTGTCTCTTTTATGCTCGGCTTTGTCCTGAATTTGAGAAGAGTTGTTCAATGTAATTTGTGAACCTTCTCTTTCTTTCTCTCTCTCTTTCCTTTTTATGATTTTTCAGTGCAGACTAGTCTTGTTATTGGATTTACATTTTTTTAGTTCTTAATATTTCCTAGATATATCAGCTCTGGAGAAAGAAGGATCTGAATCAGCATATGCTGATTATTCTGCTTCCCCTGCATTTCCAACTAATAACCAATTTGAAATGGTCAAGTTAACAAAAAGTAAATCCACCTTTATCCTTAGTTTGTGCTCTCTTTTACTCTTTTCCTTTTCTAACTTTTGATTTACAATATATGAGGTTGTGAATTTTATTTATGTGGCTATATATGTATATATATTCTCATTTTCCATGTGAACTATTGTTAAAATATCTATTAGTCAACAGAGTCAGAATTTCACATGGAGTAATTTCTTATGCTTGTAATGGTAGTGCTAGGTCTTCCATTGTTTTGTTCCTGTATGTTATAGAGTAGCAATGGAGAGGGAACTCATTCCCTGCCTATAAAATAGGATGCTTTTATCCATCTTCATCTTTCTACGGTTTTAAGGAATAGCTGAGGACTGGGTAAGCATCTATATTCTTTGTACCATCCAAGGTGTATATTGGCCAGCTTTTGAGATATAGCCCGGCTCTTGTCTCCTCTAATGAACTTTTGTTGGCTTAAATAAATACATATTTCAATTCTGATGAATTAAGGTTTTTTATTTTAAGTCAAGATATTTTTTTGGATCCGATTGTTATTTAAACAAACTATAATTTAAGGATTTCTAAACCTTCAATTACAATGGCTTATGTTAGTTGGTGCATACGGTTTATTTTCCTTCAGGAAATACCTACAATGTGGCGCCTATACCCGATGATTTTACAGGAGTCTGTCCTGGTGTTGTAGATCATTCAGCTAGTTTGACACATCCTTCCACAAAGCGGTCCAAATTGTATGACATTTTCTTTTTTTTTTTTACTTGAATTTCGTTGTTTTATCTGTTAACAACTGTTATGTGCAAAAAAATTCCTATTAGCTTGGGCAATTTTTTCTTCAATGTTTTATTCTAGTTTTGGTGTTTTTTTACTTTATGTTCTTTTCATTTGTTTTTTTTTTCCTGAGGTTTGTTTTATGTTAGAACACACACATTCCCATGGGGTTTTCAACTTATATTCCTTTTTCACTCTCTGTTTTAAGTTTTTGCGTCTGCTTTTAAGCTAAAAGTTATGGTAAGCCTTGTAATCCATAAGCTAGAAAAGTGTGTGTCGTATTTATGCTTTTCAATAACTTCTAGTACATTGAGTTGTTGTTATTATACTCTTACAAATATATAGTCTTATCAATATATATAGTTAAGATAAGAAAACACTTCATTGTTTACACATATTTACTAAAAATAAGGTGGGAAAGAAATGCAACTCAAGCTATAGAGGGCTAAGAAAATCACCAAAAAGCTCTCCAATTAAGTGTGTGGGAGTATGACAAAATGCAGTTTCAGGGAGTTTGAAGAGACAGCTAAGATGCATTCAATGTCAAATTGTACTAACTTCTTACCTAACCAAACCATTTCCTTGCTTTTTCTGGCAAGTTTTCATGGACTATTTTTCTGAGGACTAGGTGTCTAGTTTAATGACAGATGTTATAGTTTGCAATCGTTTGTTAAGAAATGGTCACCAAGTATATGATTCAGTTCCTATTGTGTTCTTGTAGGATAACTGGTGAAGGACTGTTACTGACATCTGATTTAGAGCCATCGTCAGCTAAAGCAAAAATTAGATGTGAGAAACCATGCCCCTGAAGCCAGCTTCCCCTCCTTTTTTCTTTTGGTAATGTGTGTAAGTGTTAGATTATTGCTAGAAAGATGAAAGTAAAGCATAGTGCTCGCTGGAAGAAGAGCAGTCTACATTTGCAACTTACAGAGCCTTACTAGTTTCCATCTAGGCAAAAAACAATTTAACTAGAAATATTATCTGCATATATAATTATGCGTGAATCGTGGATCCAGTACTTGAAATCAAATTTTATTTGAGTTTGTAGCTTCTATAAATTTTTTGATATACACAAAAGAAGGTTCATGGAAGTGAACAGAAATCTCTGGGTCTTCTGGTTACTTCCTTTGAGATGTTTATCGTGGGTGTATTCAGCTAGGAATCCTAGAGTAGGAAGACATTCAAATACTGAAATATATGAATATTTTATTTTACCTTTTTTTCTTGGGGCGTGGGTTGCTGTTAATGGAATTTATTTTTCTTTCCATAGAGAGGTTTTAAATTATTGACTATGCTTTAGTTTTTTCTCTCAAGTTATTGCTTGTCCTCTTTTGCTTCGCTTGATGACATTTATTTTTTTTCTTGTCCAGATGTTCCGTTTCCTCTTGCAAGTAAAATATATTACTCTCAAAGAAATAATCATTTACGTTCTGCGCTTGGTTATCTTTACTGGGAGGCTGTTGCATCTAGCAAGGAAATTTGTAATACGGTGGATCATGAAATGACGAAGGAAAATGTAAAACAATTTGATAATTCTTCTCAGGAGGAGTCGTCCCAAGAACAAACAAATGAGATTATTGGAAAGAAGGTATTGATCTATATTATTTTAAATGTTCCCTTTTCTATCTTTTATGTAATGGTTTCTTAATTTTCTGAGTCATATATGTGTAAATCCATGGACTTCCTTGCATAGTCAGCTGTCAGCCTTTTCTCTTTCTTTCTTTCTCCATTCATTGACGATGGTTAATGTTTGACATAGCCTAACATACTGACTTAAAAGGGCGGTCTTTTTGCTGGAATGGAAAGCATGGACACTGATACAAGGCATTATAGAGACATACTTTTGCACATTAATGCATTCCAATGTAATGAACTACATATTTTTAGAATTTAAGACAGACTTATATTCTAGTCCATTCAATTTCAAGCAATTTTAACATTGTAATATACTTTATGTTACTTGATGGACTGTACATTTTCTAACAACAAAATACAATTGTTCCACATACGCACTGTCTTTCAGGGAAAACTTAAAAGAAAGTTGCATCACGAACATCAGGTATAGTCTTCTATTGTGCTAGTTGTGAAATTTTACCTAAGCATCAGCTTGCATCAATTTGTTATCCGGATGATGTAAAACAATTGCTCTTCCTTGGAAAACAGATGGATAGTCATTCCTTAACCTCTGCATTGAAACCTGACAACAATCTGGCCATATTCTCATCTGGGAAATGTCTGCCTGCCGGTGGTGCCTCAAATCAGTTTGTTGTTGGCAGCAGTGTTGCATGGCCACAGATTGCTCCAGTTGAATTGACACAGAAAAAACTATCCACCTAGACGGCTAGTCCTAACTATTTTGAAGATATTTCAGGTACTGCTTGTTGTAGTTTTCAAATTTTTGTTACCCTTCAATTGATTTCCTCGTTTTTGTGATAATGTAGTTATTTTAAGTTTGTTTTTGTGATATTTGAATTGTGATTCTGAAAAGGTAGGCAGGGGGGCTTCTTTAGTCGGGTGTGAGATCGGGGTGCATTCCCCACCTCTTTTTTAGGCCTTCCTCCGGTACGTAACCCAAGAAACTTATTTTTGGAAATCTTGTTGTGGACCAGGTGAGAAAAAGATTGGTTCTTGGAGAGGTGGCAGCATGACTCTCATTAGCTCTGTACTTAGTGGAATCCCAATTTTTTTCCCTTCGTTTTCACGTTCCTTGCAGTGTAAGCAAGTCTATCGAGAAATGGTGGATGATTTCTTTTGGGAAGGAGTTGATGAAGGGGAAGGAGTGCAACTTATGAGATGGGAGGCGATGGGAAAGGCGTTAAGTCTTGGTGGGTTAGATCTTGGGAATCTTAGGGCTCGTAATAGAGCCCTGTTAATAAAATGGATATGGCAGTTCCCTCCTGAGTCAAATTCTATGTGGTATAGGATTATTGTGAGTAAGTATGGTCATCATCCCTTTGAGTGGCTGTCAGGTGGGGTTAACGGCTCGTTAGGAACCCCCGTAAAGAAATAGCCTCGAAGTTCCCTTTTTCTTAGTTCATCGTGCGGTGGGTAATCGAAAAGAAACTTATTTCCGGGAAGATGAGAAGTTGTGAGATCGCCCTTCTACTTTTTGTTCCTTGTTTCTATCATTTGTCTTCCATGAGAAATTGTCCTTGTCCTGTGGTTGATGTCTTGTCCTTTTCTGGTGATACAGTCTTTCCAATAATTTTCCAAACGATCACGAGGATGCGAGTGTTTCTTTTTCGGACACAAGAGGATATGAAAGACTGTTATCACTATCTTTCACATTCTCATGATAGTGACATTATACTACTAACTCAATTTAGGAGAGGAAAATACTTATTATTATTCATGATTTTTCAGGCAAACCATTGTAGACTAGGCAACAGCCAAGCTGAAGTGTCCTTGTTGTATAGAAGTCTTGGTGGCACGTTTTTGTAGGCACAGTGCTATATGTAATTAACCCTAAACTTGAGGTTAGGACCCTAAACCTTGTTTTTGATATTGGCAATGAAAATCATTTGAAATTGTTCATTCTATCTCTTTGTATTTAATCTCTTCTGTTCACTGCCAAGTGTAAATATGTCTTTCAGCCACTTCAAATGCGATCATTTTAATTTTTGTGAAGGCTCTCTCTCTCGCCAGTAGATATTTATTAGATGACAGTGTTAGAGCTGAAGGAACTAAAAACATGACTTATTTCTTCTCCTTTCTTCGGAAGAAACTAGATGTTTGGTTCGGTTCGGTTAGGTTAGATTAGATTAGGTTAGGTTAAAGTTTTTATGTCAAGAATATAACGACTTAAGAGAGTTTGTTATCTTGGAGTTGCT

mRNA sequence

ATCGAAGAACGGCGACGAAGATTTCTGATTTGGCAGTTGCCAAATGGCACCTCACATTTTCTTCTGTTTGCGCGGCGAAGTGAAGAAAGAGAGAGATTTCAGATAAGAAGACCAAAACCACTGCGAAGGAAAAATTCCCGCCCTCTTTCTCTCTACCTCGCTTCTTCCATAGGGTTTCTTCTCTCTTCTCGGCCATCTCTTCCGCAGCATTTCTCACAAATTTCGCAGAATTCGTTTCTGCAATTGTTTCGAAATTATCTGCTTTCTCGTCGGTTTCTGTGGGCGTGTATGATTGGAGGAGCTTCTCTGCAGATGTTTTTATTCCCAGCGGTGTAAAACTTCTTCCTTCGCGTACAATACATTTGCATAGTCTCAATGGTTTGCTCAGTTGGAAGTGTGAGAATGGCGGTGATGACAAGGCTTCTGGCTGCTGGGAGTTTCTCGCGAACTATTGCAGAGGAAGCTGGTCATCAGAAATTAGCGTCTGAATTTCTCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGATATGCACGTTTTTGGTTTGAAGCCCATGACCGATCCTCTGAATTTGGTTTGCTGCAATATCTGTAAGAAGCCAGTAAAGGCCAGCCAATACATCATTCATTCTGAACTTTGCAGGTCATTAGGTTTGGGACAAGGAGCTATTATGGACCTTGATGGTGGGATGGGCCATAGAAAACACTCGAGGAAGGAGAGCAAAAAGCTATTACCTGCTGATGCTATTCTTAATATTTCCTAGATATATCAGCTCTGGAGAAAGAAGGATCTGAATCAGCATATGCTGATTATTCTGCTTCCCCTGCATTTCCAACTAATAACCAATTTGAAATGGTCAAGTTAACAAAAAGAAATACCTACAATGTGGCGCCTATACCCGATGATTTTACAGGAGTCTGTCCTGGTGTTGTAGATCATTCAGCTAGTTTGACACATCCTTCCACAAAGCGGTCCAAATTGATAACTGGTGAAGGACTGTTACTGACATCTGATTTAGAGCCATCGTCAGCTAAAGCAAAAATTAGATATGTTCCGTTTCCTCTTGCAAGTAAAATATATTACTCTCAAAGAAATAATCATTTACGTTCTGCGCTTGGTTATCTTTACTGGGAGGCTGTTGCATCTAGCAAGGAAATTTGTAATACGGTGGATCATGAAATGACGAAGGAAAATGTAAAACAATTTGATAATTCTTCTCAGGAGGAGTCGTCCCAAGAACAAACAAATGAGATTATTGGAAAGAAGGGAAAACTTAAAAGAAAGTTGCATCACGAACATCAGATGGATAGTCATTCCTTAACCTCTGCATTGAAACCTGACAACAATCTGGCCATATTCTCATCTGGGAAATGTCTGCCTGCCGGTGGTGCCTCAAATCAGTTTGTTGTTGGCAGCAGTGTTGCATGGCCACAGATTGCTCCAGTTGAATTGACACAGAAAAAACTATCCACCTAGACGGCTAGTCCTAACTATTTTGAAGATATTTCAGGCAAACCATTGTAGACTAGGCAACAGCCAAGCTGAAGTGTCCTTGTTGTATAGAAGTCTTGGTGGCACGTTTTTGTAGGCACAGTGCTATATGTAATTAACCCTAAACTTGAGGTTAGGACCCTAAACCTTGTTTTTGATATTGGCAATGAAAATCATTTGAAATTGTTCATTCTATCTCTTTGTATTTAATCTCTTCTGTTCACTGCCAAGTGTAAATATGTCTTTCAGCCACTTCAAATGCGATCATTTTAATTTTTGTGAAGGCTCTCTCTCTCGCCAGTAGATATTTATTAGATGACAGTGTTAGAGCTGAAGGAACTAAAAACATGACTTATTTCTTCTCCTTTCTTCGGAAGAAACTAGATGTTTGGTTCGGTTCGGTTAGGTTAGATTAGATTAGGTTAGGTTAAAGTTTTTATGTCAAGAATATAACGACTTAAGAGAGTTTGTTATCTTGGAGTTGCT

Coding sequence (CDS)

ATGGTCAAGTTAACAAAAAGAAATACCTACAATGTGGCGCCTATACCCGATGATTTTACAGGAGTCTGTCCTGGTGTTGTAGATCATTCAGCTAGTTTGACACATCCTTCCACAAAGCGGTCCAAATTGATAACTGGTGAAGGACTGTTACTGACATCTGATTTAGAGCCATCGTCAGCTAAAGCAAAAATTAGATATGTTCCGTTTCCTCTTGCAAGTAAAATATATTACTCTCAAAGAAATAATCATTTACGTTCTGCGCTTGGTTATCTTTACTGGGAGGCTGTTGCATCTAGCAAGGAAATTTGTAATACGGTGGATCATGAAATGACGAAGGAAAATGTAAAACAATTTGATAATTCTTCTCAGGAGGAGTCGTCCCAAGAACAAACAAATGAGATTATTGGAAAGAAGGGAAAACTTAAAAGAAAGTTGCATCACGAACATCAGATGGATAGTCATTCCTTAACCTCTGCATTGAAACCTGACAACAATCTGGCCATATTCTCATCTGGGAAATGTCTGCCTGCCGGTGGTGCCTCAAATCAGTTTGTTGTTGGCAGCAGTGTTGCATGGCCACAGATTGCTCCAGTTGAATTGACACAGAAAAAACTATCCACCTAG

Protein sequence

MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVELTQKKLST
Homology
[Close]
BLAST of Carg17373 vs. NCBI nr
Match: XP_022939118.1 (uncharacterized protein LOC111445115 isoform X1 [Cucurbita moschata] >XP_022939125.1 uncharacterized protein LOC111445115 isoform X1 [Cucurbita moschata])

HSP 1 Score: 411.0 bits (1055), Expect = 2.4e-111
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 1   MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 60
           MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA
Sbjct: 160 MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 219

Query: 61  KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 120
           KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN
Sbjct: 220 KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 279

Query: 121 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 180
           SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA
Sbjct: 280 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 339

Query: 181 SNQFVVGSSVAWPQIAPVELTQKKLST 208
           SNQFVVGSSVAWPQIAPVELTQKKLST
Sbjct: 340 SNQFVVGSSVAWPQIAPVELTQKKLST 366

[Close]
BLAST of Carg17373 vs. NCBI nr
Match: XP_022939133.1 (uncharacterized protein LOC111445115 isoform X2 [Cucurbita moschata] >XP_022939141.1 uncharacterized protein LOC111445115 isoform X2 [Cucurbita moschata])

HSP 1 Score: 411.0 bits (1055), Expect = 2.4e-111
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 1   MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 60
           MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA
Sbjct: 140 MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 199

Query: 61  KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 120
           KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN
Sbjct: 200 KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 259

Query: 121 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 180
           SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA
Sbjct: 260 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 319

Query: 181 SNQFVVGSSVAWPQIAPVELTQKKLST 208
           SNQFVVGSSVAWPQIAPVELTQKKLST
Sbjct: 320 SNQFVVGSSVAWPQIAPVELTQKKLST 346

[Close]
BLAST of Carg17373 vs. NCBI nr
Match: XP_023540651.1 (uncharacterized protein LOC111800950 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.7 bits (1036), Expect = 3.8e-109
Identity = 203/207 (98.07%), Postives = 205/207 (99.03%), Query Frame = 0 

Query: 1   MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 60
           MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHP TKRSKLITGEGLLLTSDLEPSSA
Sbjct: 160 MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPFTKRSKLITGEGLLLTSDLEPSSA 219

Query: 61  KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 120
           K KIRYVPFPLASKIYYSQR+NHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN
Sbjct: 220 KEKIRYVPFPLASKIYYSQRSNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 279

Query: 121 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 180
           SSQEESSQEQTN+IIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA
Sbjct: 280 SSQEESSQEQTNDIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 339

Query: 181 SNQFVVGSSVAWPQIAPVELTQKKLST 208
           SNQFVVGSSVAWPQIAPVELTQKKLST
Sbjct: 340 SNQFVVGSSVAWPQIAPVELTQKKLST 366

[Close]
BLAST of Carg17373 vs. NCBI nr
Match: XP_022973738.1 (uncharacterized protein LOC111472316 isoform X1 [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 5.0e-109
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0 

Query: 1   MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 60
           MVKLTK NTYNVAPIPDDFTGVCPGVVDHSASLTHP TKRSKLITGEGLLLTSDLEPSSA
Sbjct: 160 MVKLTKSNTYNVAPIPDDFTGVCPGVVDHSASLTHPFTKRSKLITGEGLLLTSDLEPSSA 219

Query: 61  KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 120
           KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN
Sbjct: 220 KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 279

Query: 121 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 180
           SSQEESSQEQTN+IIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFS GKCLPAGGA
Sbjct: 280 SSQEESSQEQTNDIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSPGKCLPAGGA 339

Query: 181 SNQFVVGSSVAWPQIAPVELTQKKLST 208
           SNQFVVGSSVAWPQIAPVELTQKKLST
Sbjct: 340 SNQFVVGSSVAWPQIAPVELTQKKLST 366

[Close]
BLAST of Carg17373 vs. NCBI nr
Match: XP_022973739.1 (uncharacterized protein LOC111472316 isoform X2 [Cucurbita maxima] >XP_022973740.1 uncharacterized protein LOC111472316 isoform X2 [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 5.0e-109
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0 

Query: 1   MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSA 60
           MVKLTK NTYNVAPIPDDFTGVCPGVVDHSASLTHP TKRSKLITGEGLLLTSDLEPSSA
Sbjct: 140 MVKLTKSNTYNVAPIPDDFTGVCPGVVDHSASLTHPFTKRSKLITGEGLLLTSDLEPSSA 199

Query: 61  KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 120
           KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN
Sbjct: 200 KAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDN 259

Query: 121 SSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGA 180
           SSQEESSQEQTN+IIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFS GKCLPAGGA
Sbjct: 260 SSQEESSQEQTNDIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSPGKCLPAGGA 319

Query: 181 SNQFVVGSSVAWPQIAPVELTQKKLST 208
           SNQFVVGSSVAWPQIAPVELTQKKLST
Sbjct: 320 SNQFVVGSSVAWPQIAPVELTQKKLST 346

[Close]
BLAST of Carg17373 vs. TrEMBL
Match: tr|A0A1S3AX95|A0A1S3AX95_CUCME (uncharacterized protein LOC103483792 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483792 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.5e-74
Identity = 153/205 (74.63%), Postives = 169/205 (82.44%), Query Frame = 0 

Query: 1   MVKLTKRN-TYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSS 60
           M+KLTKRN T NVAPI DD TG C GV   +AS  HPSTKRSKLITGEGLLL SDLEPSS
Sbjct: 164 MIKLTKRNSTCNVAPILDDGTGACSGV--DAASFIHPSTKRSKLITGEGLLLASDLEPSS 223

Query: 61  AKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFD 120
           AK KIR VPFPLASKIYYSQRNN LRSALGYLYWEAVASSKEICN +D +MTKEN+K F 
Sbjct: 224 AKTKIRNVPFPLASKIYYSQRNNRLRSALGYLYWEAVASSKEICNMMDQQMTKENIKLFH 283

Query: 121 NSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGG 180
           ++S+EE SQEQT+++IG K            MD+ SLTSA K D+NLA+FSSGKCLPAGG
Sbjct: 284 STSEEEESQEQTSDVIGNK------------MDNQSLTSAWKSDHNLAVFSSGKCLPAGG 343

Query: 181 ASNQFVVGSSVAWPQIAPVELTQKK 205
           ASN+FV+GSSVAWPQIAPVELTQKK
Sbjct: 344 ASNKFVIGSSVAWPQIAPVELTQKK 354

[Close]
BLAST of Carg17373 vs. TrEMBL
Match: tr|A0A0A0L549|A0A0A0L549_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151420 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.2e-72
Identity = 152/205 (74.15%), Postives = 168/205 (81.95%), Query Frame = 0 

Query: 1   MVKLTKRN-TYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSS 60
           M+KLTKRN T NVAPI DD TG C GV   +ASL HPSTKRSKLITGEGLLL SDLEPSS
Sbjct: 165 MIKLTKRNLTCNVAPILDDDTGACSGV--DAASLIHPSTKRSKLITGEGLLLASDLEPSS 224

Query: 61  AKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFD 120
           AK KIR VPFPLASKIYYSQRNN LRS+LGYLYWEAVASSKEICN +D  MT EN+K F 
Sbjct: 225 AKTKIRNVPFPLASKIYYSQRNNRLRSSLGYLYWEAVASSKEICNIMDQHMTTENIKLFH 284

Query: 121 NSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGG 180
           ++S+EE SQEQT+++IGKK            MD+ SLTSA K D+NLA+FSSGKCLPAGG
Sbjct: 285 STSEEE-SQEQTSDVIGKK------------MDNQSLTSAWKSDHNLAVFSSGKCLPAGG 344

Query: 181 ASNQFVVGSSVAWPQIAPVELTQKK 205
           ASN+FV+GSSVAWPQIAPVEL QKK
Sbjct: 345 ASNKFVIGSSVAWPQIAPVELAQKK 354

[Close]
BLAST of Carg17373 vs. TrEMBL
Match: tr|A0A1S3AWW9|A0A1S3AWW9_CUCME (uncharacterized protein LOC103483792 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483792 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 121/206 (58.74%), Postives = 137/206 (66.50%), Query Frame = 0 

Query: 1   MVKLTKRN-TYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLL-LTSDLEPS 60
           M+KLTKRN T NVAPI DD TG C GV   +AS  HPSTKRSKLITGEGLL         
Sbjct: 164 MIKLTKRNSTCNVAPILDDGTGACSGV--DAASFIHPSTKRSKLITGEGLLXXXXXXXXX 223

Query: 61  SAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQF 120
                                       ALGYLYWEAVASSKEICN +D +MTKEN+K F
Sbjct: 224 XXXXXXXXXXXXXXXXXXXXXXXXXXXXALGYLYWEAVASSKEICNMMDQQMTKENIKLF 283

Query: 121 DNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAG 180
            ++S+EE SQEQT+++IG K            MD+ SLTSA K D+NLA+FSSGKCLPAG
Sbjct: 284 HSTSEEEESQEQTSDVIGNK------------MDNQSLTSAWKSDHNLAVFSSGKCLPAG 343

Query: 181 GASNQFVVGSSVAWPQIAPVELTQKK 205
           GASN+FV+GSSVAWPQIAPVELTQKK
Sbjct: 344 GASNKFVIGSSVAWPQIAPVELTQKK 355

[Close]
BLAST of Carg17373 vs. TrEMBL
Match: tr|A0A1S3AXZ3|A0A1S3AXZ3_CUCME (uncharacterized protein LOC103483792 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483792 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 121/206 (58.74%), Postives = 137/206 (66.50%), Query Frame = 0 

Query: 1   MVKLTKRN-TYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLL-LTSDLEPS 60
           M+KLTKRN T NVAPI DD TG C GV   +AS  HPSTKRSKLITGEGLL         
Sbjct: 160 MIKLTKRNSTCNVAPILDDGTGACSGV--DAASFIHPSTKRSKLITGEGLLXXXXXXXXX 219

Query: 61  SAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQF 120
                                       ALGYLYWEAVASSKEICN +D +MTKEN+K F
Sbjct: 220 XXXXXXXXXXXXXXXXXXXXXXXXXXXXALGYLYWEAVASSKEICNMMDQQMTKENIKLF 279

Query: 121 DNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAG 180
            ++S+EE SQEQT+++IG K            MD+ SLTSA K D+NLA+FSSGKCLPAG
Sbjct: 280 HSTSEEEESQEQTSDVIGNK------------MDNQSLTSAWKSDHNLAVFSSGKCLPAG 339

Query: 181 GASNQFVVGSSVAWPQIAPVELTQKK 205
           GASN+FV+GSSVAWPQIAPVELTQKK
Sbjct: 340 GASNKFVIGSSVAWPQIAPVELTQKK 351

[Close]
BLAST of Carg17373 vs. TrEMBL
Match: tr|B9RSZ4|B9RSZ4_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0679680 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-16
Identity = 70/194 (36.08%), Postives = 95/194 (48.97%), Query Frame = 0 

Query: 18  DFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKI-------RYVPFP 77
           D  GV P   DHSA +  P TKRSKL++   L L++D E +S   KI        YVP P
Sbjct: 197 DGKGVSPENTDHSACVMPPPTKRSKLVSSRHLSLSNDPEAASGLTKIISTQDTFTYVPAP 256

Query: 78  LASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEMTKENVKQFDNSSQEESSQEQ 137
           LA+KIYYSQRNN LRSA+  +Y  A A      N    E+++EN  Q   S  +    E 
Sbjct: 257 LATKIYYSQRNNRLRSAIASMYHSASAKGLG-SNVRSPEVSQENSIQLQASPHQGGLHEP 316

Query: 138 TNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSV 197
            +++  K          E    +      L   + + +  SG C+PA   S+QF V  ++
Sbjct: 317 VDDLFNK----------ERGAYACKPDQVLSQSSEVCLDKSGGCIPASNFSSQFAV-DNI 376

Query: 198 AWPQIAPVELTQKK 205
             PQ APV L + K
Sbjct: 377 LSPQPAPVGLLRTK 378

The following BLAST results are available for this feature:
BLAST of Carg17373 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022939118.12.4e-111100.00uncharacterized protein LOC111445115 isoform X1 [Cucurbita moschata] >XP_0229391... [more]
XP_022939133.12.4e-111100.00uncharacterized protein LOC111445115 isoform X2 [Cucurbita moschata] >XP_0229391... [more]
XP_023540651.13.8e-10998.07uncharacterized protein LOC111800950 [Cucurbita pepo subsp. pepo][more]
XP_022973738.15.0e-10998.07uncharacterized protein LOC111472316 isoform X1 [Cucurbita maxima][more]
XP_022973739.15.0e-10998.07uncharacterized protein LOC111472316 isoform X2 [Cucurbita maxima] >XP_022973740... [more]
BLAST of Carg17373 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg17373 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg17373 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AX95|A0A1S3AX95_CUCME4.5e-7474.63uncharacterized protein LOC103483792 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0L549|A0A0A0L549_CUCSA7.2e-7274.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151420 PE=4 SV=1[more]
tr|A0A1S3AWW9|A0A1S3AWW9_CUCME2.7e-5058.74uncharacterized protein LOC103483792 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3AXZ3|A0A1S3AXZ3_CUCME2.7e-5058.74uncharacterized protein LOC103483792 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|B9RSZ4|B9RSZ4_RICCO7.3e-1636.08Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0679680 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17373-RACarg17373-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15117:SF14SUBFAMILY NOT NAMEDcoord: 62..205
NoneNo IPR availablePANTHERPTHR15117ATAXIN 7 RELATEDcoord: 62..205

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17373Cla021701Watermelon (97103) v1carwmB0603
Carg17373Csa3G151420Cucumber (Chinese Long) v2carcuB0633
Carg17373ClCG05G005770Watermelon (Charleston Gray)carwcgB0588
Carg17373CSPI03G13890Wild cucumber (PI 183967)carcpiB0639
Carg17373Cucsa.253600Cucumber (Gy14) v1carcgyB0681
Carg17373CmaCh06G014620Cucurbita maxima (Rimu)carcmaB0849
Carg17373CmaCh14G016460Cucurbita maxima (Rimu)carcmaB0847
Carg17373CmoCh14G016900Cucurbita moschata (Rifu)carcmoB0823
Carg17373CmoCh06G014620Cucurbita moschata (Rifu)carcmoB0825
Carg17373Lsi05G014980Bottle gourd (USVL1VR-Ls)carlsiB552
Carg17373Cp4.1LG08g04580Cucurbita pepo (Zucchini)carcpeB0861
Carg17373Cp4.1LG03g11250Cucurbita pepo (Zucchini)carcpeB0860
Carg17373CsGy3G014010Cucumber (Gy14) v2carcgybB0605
Carg17373MELO3C031713.2Melon (DHL92) v3.6.1carmedB0616
Carg17373CsaV3_3G014100Cucumber (Chinese Long) v3carcucB0640
Carg17373Cla97C05G087190Watermelon (97103) v2carwmbB0631
Carg17373Bhi01G000673Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17373Carg20141Silver-seed gourdcarcarB544
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17373Wax gourdcarwgoB0719
Carg17373Wax gourdcarwgoB0720
Carg17373Silver-seed gourdcarcarB083
Carg17373Silver-seed gourdcarcarB347
Carg17373Cucumber (Gy14) v2carcgybB0606
Carg17373Cucumber (Gy14) v1carcgyB0682
Carg17373Cucurbita maxima (Rimu)carcmaB0848
Carg17373Cucurbita maxima (Rimu)carcmaB0850
Carg17373Cucurbita moschata (Rifu)carcmoB0824
Carg17373Cucurbita moschata (Rifu)carcmoB0826
Carg17373Cucurbita pepo (Zucchini)carcpeB0857
Carg17373Wild cucumber (PI 183967)carcpiB0640
Carg17373Cucumber (Chinese Long) v2carcuB0634
Carg17373Cucumber (Chinese Long) v3carcucB0641
Carg17373Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17373Melon (DHL92) v3.5.1carmeB0609
Carg17373Melon (DHL92) v3.5.1carmeB0610
Carg17373Melon (DHL92) v3.6.1carmedB0615
Carg17373Watermelon (Charleston Gray)carwcgB0589
Carg17373Watermelon (97103) v1carwmB0604
Carg17373Watermelon (97103) v2carwmbB0632