Carg17348 (gene) Silver-seed gourd

Overview
NameCarg17348
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionflowering-promoting factor 1-like protein 1
LocationCucurbita_argyrosperma_scaffold_092 : 139313 .. 140031 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGCGTTTGGGTTTTCGACAACGGGGTGATCCGGCTGGCGGAGGGCGGCGGAGGCAGTAGAAACCGGGGGCGGAATGTTCTAATTTACACGGCGACGAACGAGGCGATGACGACATTGACGGTGCTTAAGAACAAGCTGTTGAGTTTGGGATGGGAAATTTACTATGAAGATGCAGAGATTGTGCAGTTTCATAAGCCTTCTTCTGTGGACCTTATTTCCCTTCCCACGGACTTTTCTATCATCTCTCTCTCTCTCTCTCTCCGGTTGTGTTCCTTTGTTTGCTTCATTCATCTCTTTCTCATACTTTCGGGTCTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTGTTGTTGTTTATTTTCATGGGTGATTGATTGATAGTGTGGTTTGATGTGTAATAAAGATTGTAACTTTAAACTATGTTCGGGTTTTTTTTAGCCTAAAATAATCTAATTCTCTTCGTACGGGCATAAAGATTCGAACTTTTTACCTTTTTGTCTACGATGAATTTTGAACTTGCATCTAATGGTATCGTTAGAGATGTTTCGTTCGTGCCTTCTGCAAAACTCCCTTTTATTTACATGGATCCTAAGGCACGGATTCCGATCAAGAAGAGATATCTCTTCATTCCTCCTCATATTATTATTTCAACGGGGATTTTCCACCCTGTTTGGAGTGGATTCCCTCAAGGTCGAACCGTACGCCGTATGTGTTAA

mRNA sequence

ATGTCGGGCGTTTGGGTTTTCGACAACGGGGTGATCCGGCTGGCGGAGGGCGGCGGAGGCAGTAGAAACCGGGGGCGGAATGTTCTAATTTACACGGCGACGAACGAGGCGATGACGACATTGACGGTGCTTAAGAACAAGCTGTTGAGTTTGGGATGGGAAATTTACTATGAAGATGCAGAGATTGTGCAGTTTCATAAGCCTTCTTCTGTGGACCTTATTTCCCTTCCCACGGACTTTTCTATCATCTCTCTCTCTCTCTCTCTCCGAGATGTTTCGTTCGTGCCTTCTGCAAAACTCCCTTTTATTTACATGGATCCTAAGGCACGGATTCCGATCAAGAAGAGATATCTCTTCATTCCTCCTCATATTATTATTTCAACGGGGATTTTCCACCCTGTTTGGAGTGGATTCCCTCAAGGTCGAACCGTACGCCGTATGTGTTAA

Coding sequence (CDS)

ATGTCGGGCGTTTGGGTTTTCGACAACGGGGTGATCCGGCTGGCGGAGGGCGGCGGAGGCAGTAGAAACCGGGGGCGGAATGTTCTAATTTACACGGCGACGAACGAGGCGATGACGACATTGACGGTGCTTAAGAACAAGCTGTTGAGTTTGGGATGGGAAATTTACTATGAAGATGCAGAGATTGTGCAGTTTCATAAGCCTTCTTCTGTGGACCTTATTTCCCTTCCCACGGACTTTTCTATCATCTCTCTCTCTCTCTCTCTCCGAGATGTTTCGTTCGTGCCTTCTGCAAAACTCCCTTTTATTTACATGGATCCTAAGGCACGGATTCCGATCAAGAAGAGATATCTCTTCATTCCTCCTCATATTATTATTTCAACGGGGATTTTCCACCCTGTTTGGAGTGGATTCCCTCAAGGTCGAACCGTACGCCGTATGTGTTAA

Protein sequence

MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDVSFVPSAKLPFIYMDPKARIPIKKRYLFIPPHIIISTGIFHPVWSGFPQGRTVRRMC
Homology
[Close]
BLAST of Carg17348 vs. NCBI nr
Match: XP_022948046.1 (flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >XP_022973790.1 flowering-promoting factor 1-like protein 2 [Cucurbita maxima] >XP_023539907.1 flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 4.8e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDA 60
          MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDA
Sbjct: 1  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDA 60

Query: 61 EIVQFHKPSSVDLISLPTDFS 82
          EIVQFHKPSSVDLISLPTDF+
Sbjct: 61 EIVQFHKPSSVDLISLPTDFN 81

[Close]
BLAST of Carg17348 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 122.9 bits (307), Expect = 9.4e-25
Identity = 62/85 (72.94%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGG----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIY 60
          MSGVWVFDNGVIRL E  G    G+  R R VLIYT TNEAMT+ +VLKNKL SLGWE+Y
Sbjct: 1  MSGVWVFDNGVIRLVERAGAVETGAGGR-RKVLIYTPTNEAMTSYSVLKNKLASLGWEVY 60

Query: 61 YEDAEIVQFHKPSSVDLISLPTDFS 82
          YED+E++QFHKPSSVDLIS+PTDF+
Sbjct: 61 YEDSEVMQFHKPSSVDLISVPTDFN 84

[Close]
BLAST of Carg17348 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata])

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY 60
          MSGVWVFDNGVIRL E  G +       R VLIYT TNEAMT+  VLKNKL SLGWE+YY
Sbjct: 1  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY 60

Query: 61 EDAEIVQFHKPSSVDLISLPTDFS 82
          ED+E++QFHKPSSVDLIS+PTDF+
Sbjct: 61 EDSEVMQFHKPSSVDLISVPTDFN 84

[Close]
BLAST of Carg17348 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.2 bits (300), Expect = 6.1e-24
Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY 60
          MSGVWVFDNGVIRL E  G +       R VLIY  TNEAMT+  +LKNKL SLGWE+YY
Sbjct: 1  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60

Query: 61 EDAEIVQFHKPSSVDLISLPTDFS 82
          ED+E++QFHKPSSVDLIS+PTDF+
Sbjct: 61 EDSEVMQFHKPSSVDLISIPTDFN 84

[Close]
BLAST of Carg17348 vs. NCBI nr
Match: XP_022138062.1 (flowering-promoting factor 1-like protein 4 [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22
Identity = 59/82 (71.95%), Postives = 68/82 (82.93%), Query Frame = 0 

Query: 1  MSGVWVF-DNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYED 60
          MSGVWVF DNGVIRLA   G +R   R VL++T TNE MT+ TVLKNKL S+GWE+YYED
Sbjct: 1  MSGVWVFDDNGVIRLAAAEGEARR--RKVLVHTPTNEEMTSYTVLKNKLRSVGWEVYYED 60

Query: 61 AEIVQFHKPSSVDLISLPTDFS 82
          +E+VQFHKPSSVDLISLP DF+
Sbjct: 61 SEMVQFHKPSSVDLISLPADFA 80

[Close]
BLAST of Carg17348 vs. TAIR10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1))

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAE-----GGGGSRNRG-RNVLIYTATNEAMTTLTVLKNKLLSLGWE 60
          MSGVWVF+NGVIRL E     GG  +++ G RNVL+Y  T EA+++ + L+  L SLGWE
Sbjct: 1  MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61 IYYE-DAEIVQFHKPSSVDLISLPTDFS 82
           Y+  D++++Q+HK SS+DLISLP DFS
Sbjct: 61 RYFSGDSDLIQYHKRSSIDLISLPRDFS 88

[Close]
BLAST of Carg17348 vs. TAIR10
Match: AT5G24860.1 (flowering promoting factor 1)

HSP 1 Score: 84.0 bits (206), Expect = 8.7e-17
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAE----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIY 60
          MSGVWVF NGVIRL E     G  ++NR R V++Y  T E +++ + L+  L SLGWE Y
Sbjct: 1  MSGVWVFKNGVIRLVENPNQSGSDTQNR-RKVMVYLPTGEVVSSYSTLEQILQSLGWERY 60

Query: 61 Y--EDAEIVQFHKPSSVDLISLPTDFS 82
          +   D +++QFHK SS+DLISLP DF+
Sbjct: 61 FGGGDTDLLQFHKRSSIDLISLPRDFT 86

[Close]
BLAST of Carg17348 vs. TAIR10
Match: AT4G31380.1 (FPF1-like protein 1)

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-08
Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 0 

Query: 1   MSGVWVFD-NGVIRLAEG----------------GGGSRNRGRNVLIYTATNEAMTTLTV 60
           MSGVWVF+ NGV+RL E                            L++  ++E +++   
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGXXXXXXXXXXXXXXXXXXXXLVHLPSSEVVSSYGS 117

Query: 61  LKNKLLSLGWEIYY---EDAEIVQFHKPSSVDLISLPTDFS 82
           L+  L +LGWE YY       ++QFHK +S+DLISLP DFS
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFS 158

[Close]
BLAST of Carg17348 vs. Swiss-Prot
Match: sp|Q9LXB5|FLP2_ARATH (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-17
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAE-----GGGGSRNRG-RNVLIYTATNEAMTTLTVLKNKLLSLGWE 60
          MSGVWVF+NGVIRL E     GG  +++ G RNVL+Y  T EA+++ + L+  L SLGWE
Sbjct: 1  MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61 IYYE-DAEIVQFHKPSSVDLISLPTDFS 82
           Y+  D++++Q+HK SS+DLISLP DFS
Sbjct: 61 RYFSGDSDLIQYHKRSSIDLISLPRDFS 88

[Close]
BLAST of Carg17348 vs. Swiss-Prot
Match: sp|O24340|FPF1_SINAL (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEG---GGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY 60
          MSGVWVF NGVIRL E     GG  N  R V++Y  T E +++ + L+  L SLGWE Y+
Sbjct: 1  MSGVWVFKNGVIRLVENPNQSGGDTNSRRKVMVYLPTGEVISSYSTLEQILRSLGWERYF 60

Query: 61 --EDAEIVQFHKPSSVDLISLPTDFSIIS 85
             D +++QFHK SS+DLISLP DF+  S
Sbjct: 61 GGGDTDLLQFHKRSSIDLISLPKDFTKFS 89

[Close]
BLAST of Carg17348 vs. Swiss-Prot
Match: sp|O23624|FPF1_ARATH (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAE----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIY 60
          MSGVWVF NGVIRL E     G  ++NR R V++Y  T E +++ + L+  L SLGWE Y
Sbjct: 1  MSGVWVFKNGVIRLVENPNQSGSDTQNR-RKVMVYLPTGEVVSSYSTLEQILQSLGWERY 60

Query: 61 Y--EDAEIVQFHKPSSVDLISLPTDFS 82
          +   D +++QFHK SS+DLISLP DF+
Sbjct: 61 FGGGDTDLLQFHKRSSIDLISLPRDFT 86

[Close]
BLAST of Carg17348 vs. Swiss-Prot
Match: sp|Q9LGE3|FLP1_ORYSJ (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAE-----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEI 60
          MSGVWVF NGV+RL E      G       R  L++T + + +++   L+ +L +LGWE 
Sbjct: 1  MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWER 60

Query: 61 YYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDV 93
          YYED  + QFHK  S+DLISLP DFS  S S+ + D+
Sbjct: 61 YYEDPSLFQFHKRGSLDLISLPADFSAFS-SVHMYDI 96

[Close]
BLAST of Carg17348 vs. Swiss-Prot
Match: sp|A3BNA1|FLP5_ORYSJ (Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0671000 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 3  GVWVF-DNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAE 62
          GVWVF +NGV+ L E     +   R  L++ AT+E + +   L+ +L +LGWE YYED  
Sbjct: 5  GVWVFRNNGVMELEE-----QATSRKALVHVATSEVIRSTEALERRLGALGWERYYEDRA 64

Query: 63 IVQFH-KPSSVDLISLPTDFS 82
           +Q H +  S DLIS+P DFS
Sbjct: 65 TLQLHRRDGSADLISIPRDFS 80

[Close]
BLAST of Carg17348 vs. TrEMBL
Match: tr|A0A0A0LAK6|A0A0A0LAK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-22
Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGGGSR------NRGRNVLIYTATNEAMTTLTVLKNKLLSLGWE 60
          MSGVW+FDNGVIRL E  G +       +  R VLIYT TNEAMT+  VL+NKL  LGWE
Sbjct: 1  MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61 IYYEDAEIVQFHKPSSVDLISLPTDFS 82
          +YYED E++QFHKPSSVDLISLP DF+
Sbjct: 61 VYYEDGEVMQFHKPSSVDLISLPKDFN 87

[Close]
BLAST of Carg17348 vs. TrEMBL
Match: tr|A0A151STG3|A0A151STG3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_004376 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.1e-19
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGG-----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEI 60
          MSGVWVF NGV+RL E  G     GSR   R VL++ A+NEA+T+  VL+ KL SLGWE 
Sbjct: 1  MSGVWVFKNGVVRLVENPGGEAVEGSRGGRRKVLVHRASNEAITSYAVLERKLYSLGWER 60

Query: 61 YYEDAEIVQFHKPSSVDLISLPTDFS 82
          YY+D E++QFHK S+V LISLPTDF+
Sbjct: 61 YYDDPELLQFHKRSTVHLISLPTDFN 86

[Close]
BLAST of Carg17348 vs. TrEMBL
Match: tr|I1KN04|I1KN04_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782856 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-18
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGG-----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEI 60
          MSGVWVF NGV+RL E  G     GSR   R VL++ A+NE +T+  VL+ KL SLGWE 
Sbjct: 1  MSGVWVFKNGVVRLVENPGGEAVEGSRGGRRKVLVHRASNEVITSYAVLEQKLYSLGWER 60

Query: 61 YYEDAEIVQFHKPSSVDLISLPTDFS 82
          YY+DA+++QFHK S+V LISLP DF+
Sbjct: 61 YYDDADLLQFHKRSTVHLISLPRDFN 86

[Close]
BLAST of Carg17348 vs. TrEMBL
Match: tr|A0A068VFC9|A0A068VFC9_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00001810001 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.6e-18
Identity = 49/83 (59.04%), Postives = 65/83 (78.31%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEGGG---GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY 60
          MSGVWVF NGV+RL E  G   GS +R R VL++ A+ E +T+ +VL++KLLSLGWE YY
Sbjct: 1  MSGVWVFSNGVVRLVENPGEYQGSSSR-RKVLVHLASKEVITSYSVLESKLLSLGWERYY 60

Query: 61 EDAEIVQFHKPSSVDLISLPTDF 81
          +D +++QFHK S++DLISLP DF
Sbjct: 61 DDPDLLQFHKRSTIDLISLPKDF 82

[Close]
BLAST of Carg17348 vs. TrEMBL
Match: tr|A0A1U8B1N5|A0A1U8B1N5_NELNU (flowering-promoting factor 1-like protein 1 OS=Nelumbo nucifera OX=4432 GN=LOC104606119 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.6e-18
Identity = 51/90 (56.67%), Postives = 61/90 (67.78%), Query Frame = 0 

Query: 1  MSGVWVFDNGVIRLAEG------GGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSL 60
          MSGVWVF NGV+RL E        G SR      R VL++T TNE MT+  VL+ KLL L
Sbjct: 1  MSGVWVFKNGVVRLVENLAVESLDGSSRQASTTRRKVLVHTPTNEVMTSYAVLEQKLLEL 60

Query: 61 GWEIYYEDAEIVQFHKPSSVDLISLPTDFS 82
          GWE YY+D ++ QFHKPS++ LISLP DFS
Sbjct: 61 GWERYYDDPDLFQFHKPSTIHLISLPRDFS 90

The following BLAST results are available for this feature:
BLAST of Carg17348 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948046.14.8e-3798.77flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >XP_022973790.1... [more]
XP_022979994.19.4e-2572.94flowering-promoting factor 1-like protein 1 [Cucurbita maxima][more]
XP_022956217.11.2e-2471.43flowering-promoting factor 1-like protein 1 [Cucurbita moschata][more]
XP_023528953.16.1e-2469.05flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo][more]
XP_022138062.11.1e-2271.95flowering-promoting factor 1-like protein 4 [Momordica charantia][more]
BLAST of Carg17348 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10625.11.2e-1854.55BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A... [more]
AT5G24860.18.7e-1751.72flowering promoting factor 1[more]
AT4G31380.12.0e-0836.63FPF1-like protein 1[more]
BLAST of Carg17348 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LXB5|FLP2_ARATH2.2e-1754.55Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F... [more]
sp|O24340|FPF1_SINAL1.9e-1651.69Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1[more]
sp|O23624|FPF1_ARATH1.6e-1551.72Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=2 SV=1[more]
sp|Q9LGE3|FLP1_ORYSJ2.1e-1545.36Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3... [more]
sp|A3BNA1|FLP5_ORYSJ7.6e-1044.44Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp. japonica OX=3... [more]
BLAST of Carg17348 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAK6|A0A0A0LAK6_CUCSA1.3e-2265.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=4 SV=1[more]
tr|A0A151STG3|A0A151STG3_CAJCA5.1e-1960.47Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_004376 PE=4 SV=1[more]
tr|I1KN04|I1KN04_SOYBN4.3e-1858.14Uncharacterized protein OS=Glycine max OX=3847 GN=100782856 PE=4 SV=1[more]
tr|A0A068VFC9|A0A068VFC9_COFCA9.6e-1859.04Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00001810001 PE=4 ... [more]
tr|A0A1U8B1N5|A0A1U8B1N5_NELNU9.6e-1856.67flowering-promoting factor 1-like protein 1 OS=Nelumbo nucifera OX=4432 GN=LOC10... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009909regulation of flower development
Vocabulary: INTERPRO
TermDefinition
IPR039274FPF1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009909 regulation of flower development
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17348-RACarg17348-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33433:SF6SUBFAMILY NOT NAMEDcoord: 1..84
IPR039274Flowering-promoting factor 1PANTHERPTHR33433FAMILY NOT NAMEDcoord: 1..84

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17348CmaCh06G014940Cucurbita maxima (Rimu)carcmaB0849
Carg17348Cp4.1LG08g04810Cucurbita pepo (Zucchini)carcpeB0861
Carg17348Cla97C05G087520Watermelon (97103) v2carwmbB0631
Carg17348Cla97C06G114670Watermelon (97103) v2carwmbB0632
Carg17348Bhi12G001836Wax gourdcarwgoB0720
Carg17348Bhi01G000709Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17348Carg05499Silver-seed gourdcarcarB083
Carg17348Carg18838Silver-seed gourdcarcarB543
Carg17348Carg20114Silver-seed gourdcarcarB544
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17348Cucumber (Gy14) v2carcgybB0605
Carg17348Cucumber (Gy14) v1carcgyB0681
Carg17348Cucurbita maxima (Rimu)carcmaB0847
Carg17348Cucurbita maxima (Rimu)carcmaB0848
Carg17348Cucurbita maxima (Rimu)carcmaB0850
Carg17348Cucurbita moschata (Rifu)carcmoB0823
Carg17348Cucurbita moschata (Rifu)carcmoB0824
Carg17348Cucurbita moschata (Rifu)carcmoB0825
Carg17348Cucurbita moschata (Rifu)carcmoB0826
Carg17348Cucurbita pepo (Zucchini)carcpeB0857
Carg17348Cucurbita pepo (Zucchini)carcpeB0859
Carg17348Cucurbita pepo (Zucchini)carcpeB0860
Carg17348Wild cucumber (PI 183967)carcpiB0639
Carg17348Cucumber (Chinese Long) v2carcuB0633
Carg17348Cucumber (Chinese Long) v3carcucB0640
Carg17348Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17348Bottle gourd (USVL1VR-Ls)carlsiB552
Carg17348Melon (DHL92) v3.5.1carmeB0609
Carg17348Melon (DHL92) v3.5.1carmeB0610
Carg17348Melon (DHL92) v3.6.1carmedB0615
Carg17348Melon (DHL92) v3.6.1carmedB0616
Carg17348Watermelon (Charleston Gray)carwcgB0588
Carg17348Watermelon (Charleston Gray)carwcgB0589
Carg17348Watermelon (97103) v1carwmB0603
Carg17348Watermelon (97103) v1carwmB0604