Carg17296 (gene) Silver-seed gourd

Overview
NameCarg17296
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEukaryotic translation initiation factor 5A
LocationCucurbita_argyrosperma_scaffold_135 : 427067 .. 436476 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGGGACAGAAAACCAAACTCGAAAATGGCGATTCCCGGAGATCCAAGGGCATCTGCAACACCAGGTCTTGTCATCCACGGCATCCTTCGACCTCCCTTCATCCTCTTAAGGTCTGAAAAACAACTCTCTCATCTTCATTTCTCTAATAATACACTTCCTTGTCTTCATTTTCATCCGAGATTGTTGCCATTCGTCAAATGCATCTCCGTTTCTCCAAAATGCATGGAATAGACATAGCTGTTCGGAATAAGGAACTAGGTTAGTCGTTAGCCTTGCGATCGGCATTTTAAGTGACATCGAACATGTCTATTGTTTATAGTTTGCTAGTTATTAGCATTACTTTCTGGATTTTGATTTTGTGATTTGCCTTTTGGCTAATTGACTATATCATATCGGGATCGTAGTTCTTAGCTTATTTCTTCATTTCTTATGGCAGTGTTCAAATATTAGTTGTTTAGTTGCCTCTCCAGGGTTTATTAATTTTATTTGAAGCTTTGGACTCGATTTTGATCTCAACAATACATGATGCTGCTTGAACGCACCGAGTCAGGTTTAAATTTCTATAATGTAGATAGCTTAGACTGTGTATTCTGATAGTTGCGAGACGGTTTGGTTTATCCTATAAAAATTTTAATGTCACTTGAGTAGATGGTGCGCTGCTTCTGATGTGGTCTTTTTTAGGCGGAACCGTAAGCATACATAACTTAGAAGACCTATCTATGAAGATTTGTCAAACCTTGCTTAAATACATTTTTAGTTCTGGAAACAATCGGATACGTTTGCTTAGATTTTACTGAATATTGCCTTGTGCGGTATCACTTTGTAAGAAGCTGGAGCTCTTCTTTTTTCGGTCTATTTGCATCAGGCTCATAAACACTCGTTAATCTTTCGTTCTTTCATTAAAGAAGTTAAGACTTTTGATAGGAGGATTGATAAAGAGAATAGAGCAAAAGGAGCCTTCTGGAAAACTTGCAAAGTGGTTTTATTTAATTTGAGGTTCATGTAGGTGGACCTCTCTAGTTTTGTTCATAGAAGGGTTGGAATATAGGAATGCAGCCAAAAATGGCACACCATGGTAAATGAAAATGAGAGCACCTAGTATCTCCCTGCAAGATGTTGAGAGCTCAACAAATTATGAACGATTACCAAAATCCTTAAGCCAAGAAATCTTTGTTCTTAGTTCCATTAACGTGAACGTTCTGGAACGATTATTGGTTTGGAGGAGAACTTATTTATCATCAACACCTAAATTGAACTCTACTGCTATGATTGGAATGCGGTGGTTAAAGATGTCTCTCTCTGTCTTATTTTTGATATATGAATACTATAGCAGTAAAAAATTCAATTTGTTTAATCTTCTTGTAGTATATTTTATTGTTATTTGGCCCATATTTATTTTATTTCCATCAGGGTAAGCTGGCAAATTGACGAGACACTGCATTCTGGCTTTCTTCTCTCTGTCTGCTGCCTCAAATATCCCGAACCGTGAAGCCTTAAAGTCCTGAGCTGATTGAGGTATGTTGATTAATGTCTTGGGCTAAATCGTATAAGGTATGTTAGATTTTATCCTAGAACATTTATTTATAATATTTAATAGAAGGCAGTGTTGGAATCTTTCAACAAGGATGTTGGAGGACAACTACTGCAACACGGAATCCAAAATGCAATGATCTAGAGTTAGACGTGCTACCATTACGCCACGATCCCTTGTAAGTATGCCACTCTAGTTCGACCTATAAATTATAGAAAAAGTTAAATTTGGAAGAAACAAGAATTTGAACCCGACGTGAATTGAACACACAACCTTTTGATCTAGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCATTATGTGAGTCTAGTTCTAGTGCTACGTGACCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTGGTATTAACAAAAAGAAGGAATGCTAGAAAAAGTGGAAAACACGAATTTGAACCCGACGTGAATCGAACACGCAACCTTTTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCAATATGTGAGTCTAGTTCTAGTGCTACGTGACCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAAGGCTAGAAAAAGTGGCGACGTGAATCGAACACGCAACCTTCTGATATGGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCAATATGTGAGTCTAGTTCTAGTGCTACGTGACCTATAAATTAAATCCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAAGGCTAGAAAAAGTGGAAAACCTTTTGATCTGGAAAAAGAGGGTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCATATGCGCTACCATTGCGCCACGGATCCCTTACCAATATGTCAGTTCTAGTGTTATGTGGCCTATAAATTAAGCCCAATCCCAGTATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAACGCTAGAAAAAGTGGGGAACAAGAATTTGAACCCGACGTGAATCGAACACGTAACCTTCTGATCTGGAGTCAAACACGCTACCCATTACGCCACGAATCCCTTACCAATGCTGTAGAAAAAGTGAGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTAGAGTCAGACGCGCTACCATTGCGCCACGGATCAGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCTCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGTAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGAATCCCTTACCATTATGTGAATCTAGTTCTAGTGCTACGTGACCTATAAATTAAGACCAATCCCAGTATAGAATGGAAAAGGTTAAATTTGGAAGATTATTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCAATGTGTCAGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAAGTTAAATTTGGAAGATTCGTATTATCAAGAGAAGGAATGCTAGAAAAAGTGGGGAACAAGAATTTGAACCTGAATTGAACACGCAATCTTTTGATCTGGAGTCAGACGCGCTACCATTGTGCCACGAATCCCTTACCAATATGTCAGTCTAGTTCTAGTGTTACGTGACCTATAAATTAAGCCCAATCCCAATATAGAATGGATCCCTTACCAATATGTCAGTCTAGTTCTAGTGTTACGTGACCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAGGTTTGAACCTGAATTGAACACGCATGCCATCTGGAGTCAGACGCGCTACCATTGTGCCACGAATCCCTTACCAATATGTCAGTCTAGTTCTAGTGTTACGTGACCTATAAATTAAGCCCAATCCCAATATAGAATGGATCCCTTACCAATATGTCAGTCTAGTTCTAGTGTTACGTGACCTATAAATTAAGCCCAATCCCAATATAGAATGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACGCTACCATTGTGCCCACGAATCCCTTACCAATGTGTCAGTCTAGTTCTAGTGTTACGTGACCTATAAAATTAAGCCCAATCCCAATATAGAATGGATTCCCTTACCAATATGTCAGTCTAAATTCTGGAAGATTACGTGACCTATCAATTTAAGCCCAATCCCAATTATAGAATGGGAAACAAGAATTTGAACCCGACGTGAACGAACACGCATTCTGATCTGGAGTCAGACGCGCTAACCATTGCGCCACGGATCCCTTACCCAATGTGTCAGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAAGTTAAATTTGGAAGATTCGTATTATCAAGAGAAGGAATGCAAAAGAAGGAAACCGCTGAATCGAAAAAGTGGAGTCAGACGCGCTACCAACGAATTATGTGACCTAGTGTTCGTGGCCTATAAATTAAGCCCACGAATGGAAAAGGTGAATAGAAAAAGTGGGGAACAAGAATTTGAACCGGACGTGAATCGAACACGCAATCTTTTGATCTGGAGTCAGGCGCGCTACCATTGTGCCACGAATCCCTTACCAATATGTCAGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAAGGCTAGAAAAAGTGGAAAACCTTTTGATCTGGAAAAAGTGGGAACAAGAATTTGAACCCAACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGATGCGCTACCATTGCGCCACGGATCCCTTACCAATATGTCAGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCCCAATCCCAGTATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAACGCTAGAGAAAGTGGGGAACAAGAAATTTGAACCCGACGTGAATCGAACACGTAACCTTCTGATCTGGAGTCAGACACGCTACCCATTACGCCACGAATCCCTTACCATTGCTGTAGAAAAAGTGAGAAACAAGAATTTGAACCCGTGAATCGAACACGCAACCTTCTGATCTAGAGTCGCGCTACCATTACGTGGCCTACAAATTAAGCTCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCACCACGAATCCCTTACCAGTATGTGAGTCTAGTTCTAGTGCTACGTGACCTATAAATTAAGACCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTATTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCAATGTGTCTGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCATTATGTGAGTCTAGTTCTAGTGCTACGTGACCTATAAATTAAGACCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTATTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACAGATCCCTTACCATTATGTGAGTCTAGTTCTAGTGTTACGTGGCCTATAAATTAAGCCCAATCCCAATATAGAATGGAAAAGGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAAGGCTAGAAAAAGTGGGGAACAAGAATTTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCCTTACCATTATGTGAGTCTAGTTCTAGTGTTACGTGACCTATAAATTAAGCCCAATCCCAATGTAGAATGGAAAAGGTTAAATTTGGAAGATTGGTATTAACAAAAAGAAGGAATGCTAGAAAAAGTGGAAAACACGAATTTGAACCCGACGTGAATCGAACACGCAACCTTTTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGAATCCCTTACCATTATGTCAGTCTAATTCTAGTACTACGTGGCCTATAAATTAAGCCGAATCCCAATATAGAATGGAAAATGTTAAATTTGGAAGATTCGTATTATCAAAAGAAGGAATGCTAGAAAAAGTGGGAAATAAGAATTTGAACCCGACATGAATTGAACAAGCAACCTTCAAATCTCGAGTCAGACGCGCTACCATTGCACCACAAATCCCTTACCAATATGTCAGTCTAGTTCTATTATTACAACCTTCTGATCTGGAGTCAAACGCGCTACCATTGCGCCACAAATCCCTTCTCTATATGTCATTCTAGTTCTATTGGTGCATGGATATACAATGGAAAAGGTTTCGAATCGAACACGCAACTTCCAGATCTGGAGTCAATTGCACTACCTCCACGTTGTTAGAATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCGTAAGCTCTCATGGATTTGCTTTGGGCTTCCCCAAAATACTTCATATGAATGGAGTTAGTATTCCTCACTTATAAATCCATAATCATTTCCTAAATTAGGCAACGTGGAACTTTCACCCATTAGTATGTCGGCCTTAATTAATTAAGCCCACATTCGGCCTTGGATCTCTTCAACATTGATCATTCTAGTTTTAGACTACGCGACCTATAAAAATTCTGTCCAAGCCGATGCAACCTTTGAACCAAAGTTCGAAGAATACCATTCCGCCACTAGTCCACTAGTAGTACTCCATCATTTTTTAATTAATATTAATGGTTTAAAAAATGTAAATATCTAATTAATCGAATAAATGTTCTATAACATTATTAAAATGTAATCTAATATTTGTCAAATCAATTTGGACGGTCATCTTATAATCCTATGACTAAGGTATTTATTTGCGTTTTTGATGTTTGAAACCCTAGGATTCTCACTACCCTTTTTTCTTCTTCGTTTTTCTCGTGCATATAAATTCGCATCTTTTCGTCTGCCCCCTCTGGCGCACGTCTCTGAGCCTAATTAGTTTTCTGTCTACTCTCCTCTTTGCACCTTTTCTCATACAGAGCCATGTCGGACGAGGAGCACCACTTTGAGTCGAAGGCCGACGCGGGAGCTTCCAAGACTTTTCCGCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATAGTCATCAAGGGCAGGCCTTGCAAGGTTTATTTCGTTTTCATTCTTATTCCTCAATTCGCTCCGATCCTTTGCCCCATCTATCCACGTAATTCTTGTTTAACATGTGATATCTATGCGTTATATCTTTTGCTTCAATTTTCCTTTTCTTGTTGCCCTATTTATATAGCTTTTTATAGGGTTATTCCGTACTCAATCTTGTTCTGTGATTTTCGGTTAATTGTGTTTCTTTGATTTTCTATGATTTTACTTTTAGATTTTTTTCCATAGATCACATGTTTGCTAGAATGAAATTAATGAATCGGTTGAAGCTACCATATTCCGATCTGTTTCTCTCTAGGGCTTTCGTCTTCCGTGGTTTCTGCATATTATTTGTTATGTTGTATTTATGTTCTTCAATTAGCAATCTTGGTCTAAGACTTATGCATTGCTGTTTTGTAGGTTGTTGAGGTTTCAACCTCAAAGACGGGAAAGCATGGACATGCTAAATGCCACTTTGTTGCCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAACTGTGATGTATGAAGATTCTTTTTCCTTTCCGTTTTATACTTTTCCAGCAGGTTGTAGGTTTGTTTGTACAAGTTTTTGATTTCTGATTCTTGTAATTGTAAAACACAGGTTCCCCATGTCAACCGTACTGACTACCAGCTCATTGATATCTCTGAGGATGGATTTGTATGATCAAATTCTCTTTCTTTAGATCTTTGTATGAGTTTCCCTTGCTCATCCATCCATTTTGAGTACTGTAGCTAATTCTAATTTCAATGAAAACTTACCAGATTAGCCTGCTGACGGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCATCGGATGAGAGTCTGCTGTCCCAGGTACGATTTTCTTATTGGCTGTTGACATTTTCTTGTCCTGCTGTGTTCAATTTGTCTTTAATTGCCTTGTGAAGACCACATTGCTTGTTAGGGCGAAACTATTTATTTCCTCCACTCCTTACGGTATATTATCCGGTACTTGTTTGGAGTTCTAAACGTGGATGGCTGACTGTTTTTACTATCCTCACCCCCCCCCCCCCCCCCCCCCATTATGCTTATGGGTTTGGATTTCTAGCGAAAATGTGTTAAAATGTCGATGATTAACTAACAAGAATTTCATATCATTAGATAGATAGAAGAACCCATGATTCCAAACCAATCACCTTTGGAGCTTTTCTATATAAAGATCAAATCTAATTATATGAGTGTCTAATATTGATATCTTGTGCTTAGTACTAACCTCTAGGAGTGTCTAATATTTGATATCTTGTGCTTAGTACTAACCTCTAGGGGGCTGATTAAGGAGTTATTTTATGAATAATTTTATGTTCATCTGCAAGTTTTCCGTTCCTTGCACGTCGGGGTCTTATTCGGAAGAACAATAGCTGCCATAGGCTATGAGTGGTATAATTTTGAAGATTTATTGTGTTCATGCAGATCAAGGATGGCTTCGCGGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATTGGCCCAAAATAGATTCTTTTGATGAATAGAAAGCAGCAAAATTTTTGGCCTCCTTGTTGCTGTTTGAATCAAGAGTTGTTTCTTGGCTAGTCTTCTTTATGTAAACTTCATAGCTGCTATGGTTGTTTAAGAGTTGTAGGATGATAGGTTCATGGTTTCTGATGAAGTATAATATTTATTTGCCATTAGGGGTTTCTACTTTGTTCTATTGTCACATTACAGATATTCTTTGTTGGTCTTTTGAAGCTTGATTTCATGTTTTCTTTTGGGGACTTCAATTAGATGCACACTGTGTTCGTATATTTGCTGTGTACGACGCTGAGTATGCGTACCGATAAAAAGGAAAATGAAAGAAAGCCAGGGCCATACAGGTAAACTTTGTACCGTCTCAAAAATACTTTTAATTTCAAAAGTGTTCTATAGAACTCTTAAATTATGGAATGCGAGTATTTTTAAA

mRNA sequence

CAGGGGACAGAAAACCAAACTCGAAAATGGCGATTCCCGGAGATCCAAGGGCATCTGCAACACCAGGTCTTGTCATCCACGGCATCCTTCGACCTCCCTTCATCCTCTTAAGGGTAAGCTGGCAAATTGACGAGACACTGCATTCTGGCTTTCTTCTCTCTGTCTGCTGCCTCAAATATCCCGAACCAGCCATGTCGGACGAGGAGCACCACTTTGAGTCGAAGGCCGACGCGGGAGCTTCCAAGACTTTTCCGCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATAGTCATCAAGGGCAGGCCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACGGGAAAGCATGGACATGCTAAATGCCACTTTGTTGCCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAACTGTGATGTTCCCCATGTCAACCGTACTGACTACCAGCTCATTGATATCTCTGAGGATGGATTTCTAATTCTAATTTCAATGAAAACTTACCAGATTAGCCTGCTGACGGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCATCGGATGAGAGTCTGCTGTCCCAGATCAAGGATGGCTTCGCGGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATTGGCCCAAAATAGATTCTTTTGATGAATAGAAAGCAGCAAAATTTTTGGCCTCCTTGTTGCTGTTTGAATCAAGAGTTGTTTCTTGGCTAGTCTTCTTTATGTAAACTTCATAGCTGCTATGGTTGTTTAAGAGTTGTAGGATGATAGGTTCATGGTTTCTGATGAAGTATAATATTTATTTGCCATTAGGGGTTTCTACTTTGTTCTATTGTCACATTACAGATATTCTTTGTTGGTCTTTTGAAGCTTGATTTCATGTTTTCTTTTGGGGACTTCAATTAGATGCACACTGTGTTCGTATATTTGCTGTGTACGACGCTGAGTATGCGTACCGATAAAAAGGAAAATGAAAGAAAGCCAGGGCCATACAGGTAAACTTTGTACCGTCTCAAAAATACTTTTAATTTCAAAAGTGTTCTATAGAACTCTTAAATTATGGAATGCGAGTATTTTTAAA

Coding sequence (CDS)

ATGGCGATTCCCGGAGATCCAAGGGCATCTGCAACACCAGGTCTTGTCATCCACGGCATCCTTCGACCTCCCTTCATCCTCTTAAGGGTAAGCTGGCAAATTGACGAGACACTGCATTCTGGCTTTCTTCTCTCTGTCTGCTGCCTCAAATATCCCGAACCAGCCATGTCGGACGAGGAGCACCACTTTGAGTCGAAGGCCGACGCGGGAGCTTCCAAGACTTTTCCGCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATAGTCATCAAGGGCAGGCCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACGGGAAAGCATGGACATGCTAAATGCCACTTTGTTGCCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAACTGTGATGTTCCCCATGTCAACCGTACTGACTACCAGCTCATTGATATCTCTGAGGATGGATTTCTAATTCTAATTTCAATGAAAACTTACCAGATTAGCCTGCTGACGGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCATCGGATGAGAGTCTGCTGTCCCAGATCAAGGATGGCTTCGCGGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATTGGCCCAAAATAG

Protein sequence

MAIPGDPRASATPGLVIHGILRPPFILLRVSWQIDETLHSGFLLSVCCLKYPEPAMSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGNTKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Homology
[Close]
BLAST of Carg17296 vs. NCBI nr
Match: XP_022944889.1 (eukaryotic translation initiation factor 5A-4-like [Cucurbita moschata] >XP_022967964.1 eukaryotic translation initiation factor 5A-4-like [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 5.1e-83
Identity = 159/169 (94.08%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          ISLLTDSGN
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------ISLLTDSGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. NCBI nr
Match: XP_023541941.1 (eukaryotic translation initiation factor 5A-4-like [Cucurbita pepo subsp. pepo] >XP_023541942.1 eukaryotic translation initiation factor 5A-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 158/169 (93.49%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          ISLLTDSGN
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------ISLLTDSGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. NCBI nr
Match: XP_022957459.1 (eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata] >XP_022989737.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita maxima] >XP_023516204.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 8.2e-81
Identity = 153/169 (90.53%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT+KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF          ISLLTDSGN
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGF----------ISLLTDSGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DESL++QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPNDESLMTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. NCBI nr
Match: XP_010908239.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Elaeis guineensis])

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAID+FTAKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGF          +SLLTDSGN
Sbjct: 61  VAIDVFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGF----------VSLLTDSGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LL+QIKDGFAEGKDL+VTVMS+MGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDETLLAQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. NCBI nr
Match: XP_010101033.1 (eukaryotic translation initiation factor 5A-4 [Morus notabilis] >EXB86681.1 Eukaryotic translation initiation factor 5A-4 [Morus notabilis])

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLTD+GN
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTDNGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LLSQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDEALLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. TAIR10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1)

HSP 1 Score: 280.4 bits (716), Expect = 9.6e-76
Identity = 138/169 (81.66%), Postives = 153/169 (90.53%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFES +DAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG+          +SLLTD+G+
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGY----------VSLLTDNGS 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDL+LP+D++LL QIK GF +GKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 TKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]
BLAST of Carg17296 vs. TAIR10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3)

HSP 1 Score: 278.1 bits (710), Expect = 4.8e-75
Identity = 133/169 (78.70%), Postives = 154/169 (91.12%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSD+EHHFES +DAGASKT+PQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT+KKLEDIVPSSHNCDVPHVNR DYQLIDISEDGF          +SLLTD+G+
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGF----------VSLLTDNGS 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDL+LP+DE+LL+Q+K+GF EGKD++V+VMS+MGEEQ+CALK++GPK
Sbjct: 121 TKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]
BLAST of Carg17296 vs. TAIR10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein)

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-69
Identity = 125/167 (74.85%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSD+EHHFE+ +++GASKT+PQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFTAKKLEDIVPSSHNCDVPHVNR DYQLIDI+EDGF          +SLLTDSG 
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGF----------VSLLTDSGG 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIG 223
           TKDDL+LP+D+ L +Q++ GF EGKD++V+VMSSMGEEQICA+K++G
Sbjct: 121 TKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]
BLAST of Carg17296 vs. Swiss-Prot
Match: sp|P24922|IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.2e-80
Identity = 145/169 (85.80%), Postives = 157/169 (92.90%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEH FESKADAGASKT+PQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLT++GN
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTENGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+D++LL+QIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. Swiss-Prot
Match: sp|P56336|IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-79
Identity = 147/169 (86.98%), Postives = 156/169 (92.31%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEH FESKADAGASKT+PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLTD+GN
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTDNGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+D+SLLSQIKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 TKDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]
BLAST of Carg17296 vs. Swiss-Prot
Match: sp|Q9AXJ4|IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-79
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           V IDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLT++GN
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTETGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LLSQIKDGFAEGKDL+V+VMS+MGEE+IC+LKDIGPK
Sbjct: 121 TKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

[Close]
BLAST of Carg17296 vs. Swiss-Prot
Match: sp|Q9AXQ4|IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 147/169 (86.98%), Postives = 155/169 (91.72%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLTD+GN
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTDNGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LLS IKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 TKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]
BLAST of Carg17296 vs. Swiss-Prot
Match: sp|P56335|IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum OX=4113 GN=EIF5A3 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-78
Identity = 144/169 (85.21%), Postives = 153/169 (90.53%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLT+SGN
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTESGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DESLL Q+KDGF EGKDL+V+VMS+MGEEQI A+KDIG K
Sbjct: 121 TKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTK 159

[Close]
BLAST of Carg17296 vs. TrEMBL
Match: tr|W9S3D3|W9S3D3_9ROSA (Eukaryotic translation initiation factor 5A OS=Morus notabilis OX=981085 GN=L484_013212 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 9.2e-81
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLTD+GN
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTDNGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LLSQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDEALLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. TrEMBL
Match: tr|B3TLM2|B3TLM2_ELAGV (Eukaryotic translation initiation factor 5A OS=Elaeis guineensis var. tenera OX=51953 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 9.2e-81
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAID+FTAKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGF          +SLLTDSGN
Sbjct: 61  VAIDVFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGF----------VSLLTDSGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LL+QIKDGFAEGKDL+VTVMS+MGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDETLLAQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. TrEMBL
Match: tr|A0A097HTP7|A0A097HTP7_9LAMI (Eukaryotic translation initiation factor 5A OS=Lindernia subracemosa OX=303139 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.7e-80
Identity = 150/169 (88.76%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLTD+GN
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTDNGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DE+LL+QIKDGFAEGKDL+V+VMSSMGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDENLLAQIKDGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. TrEMBL
Match: tr|A0A1S3BFT8|A0A1S3BFT8_CUCME (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489162 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.5e-80
Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           V IDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF          ISLLTDSG+
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGF----------ISLLTDSGS 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+D++LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDDNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]
BLAST of Carg17296 vs. TrEMBL
Match: tr|A0A097HTR8|A0A097HTR8_9LAMI (Eukaryotic translation initiation factor 5A OS=Lindernia brevidens OX=263965 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.5e-80
Identity = 150/169 (88.76%), Postives = 157/169 (92.90%), Query Frame = 0 

Query: 56  MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 115
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 116 VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLILISMKTYQISLLTDSGN 175
           VAIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF          +SLLTD+GN
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF----------VSLLTDNGN 120

Query: 176 TKDDLRLPSDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 225
           TKDDLRLP+DESLL+QIKDGF EGKDL+V+VMSSMGEEQICALKDIGPK
Sbjct: 121 TKDDLRLPTDESLLTQIKDGFGEGKDLVVSVMSSMGEEQICALKDIGPK 159

The following BLAST results are available for this feature:
BLAST of Carg17296 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944889.15.1e-8394.08eukaryotic translation initiation factor 5A-4-like [Cucurbita moschata] >XP_0229... [more]
XP_023541941.11.1e-8293.49eukaryotic translation initiation factor 5A-4-like [Cucurbita pepo subsp. pepo] ... [more]
XP_022957459.18.2e-8190.53eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata] >XP_0229... [more]
XP_010908239.11.4e-8089.35PREDICTED: eukaryotic translation initiation factor 5A-2 [Elaeis guineensis][more]
XP_010101033.11.4e-8089.35eukaryotic translation initiation factor 5A-4 [Morus notabilis] >EXB86681.1 Euka... [more]
BLAST of Carg17296 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13950.19.6e-7681.66eukaryotic elongation factor 5A-1[more]
AT1G69410.14.8e-7578.70eukaryotic elongation factor 5A-3[more]
AT1G26630.11.8e-6974.85Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein[more]
BLAST of Carg17296 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P24922|IF5A2_NICPL6.2e-8085.80Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40... [more]
sp|P56336|IF5A4_SOLTU1.1e-7986.98Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EI... [more]
sp|Q9AXJ4|IF5A_MANES1.4e-7985.21Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV... [more]
sp|Q9AXQ4|IF5A3_SOLLC1.8e-7986.98Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE... [more]
sp|P56335|IF5A3_SOLTU1.5e-7885.21Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum OX=4113 GN=EI... [more]
BLAST of Carg17296 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|W9S3D3|W9S3D3_9ROSA9.2e-8189.35Eukaryotic translation initiation factor 5A OS=Morus notabilis OX=981085 GN=L484... [more]
tr|B3TLM2|B3TLM2_ELAGV9.2e-8189.35Eukaryotic translation initiation factor 5A OS=Elaeis guineensis var. tenera OX=... [more]
tr|A0A097HTP7|A0A097HTP7_9LAMI2.7e-8088.76Eukaryotic translation initiation factor 5A OS=Lindernia subracemosa OX=303139 P... [more]
tr|A0A1S3BFT8|A0A1S3BFT8_CUCME3.5e-8089.94Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489... [more]
tr|A0A097HTR8|A0A097HTR8_9LAMI3.5e-8088.76Eukaryotic translation initiation factor 5A OS=Lindernia brevidens OX=263965 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006452translational frameshifting
GO:0045905positive regulation of translational termination
GO:0045901positive regulation of translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
GO:0003746translation elongation factor activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR008991Translation_prot_SH3-like_sf
IPR012340NA-bd_OB-fold
IPR019769Trans_elong_IF5A_hypusine_site
IPR001884IF5A-like
IPR014722Rib_L2_dom2
IPR020189Transl_elong_IF5A_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0006452 translational frameshifting
cellular_component GO:0005840 ribosome
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17296-RACarg17296-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 140..219
e-value: 1.7E-25
score: 100.7
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 140..219
e-value: 2.1E-24
score: 85.3
IPR014722Ribosomal protein L2, domain 2GENE3DG3DSA:2.30.30.30coord: 56..140
e-value: 9.4E-46
score: 155.6
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 141..224
e-value: 7.8E-29
score: 101.6
NoneNo IPR availablePANTHERPTHR11673:SF16SUBFAMILY NOT NAMEDcoord: 56..224
NoneNo IPR availableCDDcd04468S1_eIF5Acoord: 141..221
e-value: 3.78772E-28
score: 101.845
IPR001884Translation elongation factor IF5A-likeTIGRFAMTIGR00037TIGR00037coord: 73..218
e-value: 2.5E-37
score: 125.6
IPR001884Translation elongation factor IF5A-likePANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A-RELATEDcoord: 56..224
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 105..112
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 141..221
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILYSSF50104Translation proteins SH3-like domaincoord: 70..148

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17296Cla010217Watermelon (97103) v1carwmB0097
Carg17296Csa5G606480Cucumber (Chinese Long) v2carcuB0108
Carg17296ClCG05G023950Watermelon (Charleston Gray)carwcgB0099
Carg17296CSPI05G24100Wild cucumber (PI 183967)carcpiB0113
Carg17296Cucsa.284720Cucumber (Gy14) v1carcgyB0122
Carg17296CmaCh04G016850Cucurbita maxima (Rimu)carcmaB0133
Carg17296CmaCh18G011220Cucurbita maxima (Rimu)carcmaB0131
Carg17296CmoCh18G011430Cucurbita moschata (Rifu)carcmoB0140
Carg17296CmoCh04G017670Cucurbita moschata (Rifu)carcmoB0142
Carg17296Lsi04G003850Bottle gourd (USVL1VR-Ls)carlsiB091
Carg17296Cp4.1LG01g12200Cucurbita pepo (Zucchini)carcpeB0148
Carg17296Cp4.1LG09g02210Cucurbita pepo (Zucchini)carcpeB0146
Carg17296CsGy5G023650Cucumber (Gy14) v2carcgybB0108
Carg17296MELO3C012131.2Melon (DHL92) v3.6.1carmedB0103
Carg17296CsaV3_5G033100Cucumber (Chinese Long) v3carcucB0117
Carg17296Cla97C05G105940Watermelon (97103) v2carwmbB0100
Carg17296Bhi07G001241Wax gourdcarwgoB0115
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17296Carg14381Silver-seed gourdcarcarB110
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17296Silver-seed gourdcarcarB056
Carg17296Silver-seed gourdcarcarB112
Carg17296Cucumber (Gy14) v2carcgybB0106
Carg17296Cucumber (Gy14) v1carcgyB0118
Carg17296Cucumber (Gy14) v1carcgyB0120
Carg17296Cucurbita maxima (Rimu)carcmaB0132
Carg17296Cucurbita moschata (Rifu)carcmoB0141
Carg17296Cucurbita pepo (Zucchini)carcpeB0150
Carg17296Wild cucumber (PI 183967)carcpiB0111
Carg17296Cucumber (Chinese Long) v2carcuB0106
Carg17296Cucumber (Chinese Long) v3carcucB0115
Carg17296Bottle gourd (USVL1VR-Ls)carlsiB089
Carg17296Melon (DHL92) v3.5.1carmeB0101
Carg17296Melon (DHL92) v3.5.1carmeB0102
Carg17296Melon (DHL92) v3.6.1carmedB0104
Carg17296Watermelon (Charleston Gray)carwcgB0098
Carg17296Watermelon (97103) v1carwmB0099
Carg17296Watermelon (97103) v2carwmbB0099
Carg17296Watermelon (97103) v2carwmbB0102
Carg17296Wax gourdcarwgoB0114