BLAST of Carg17272 vs. NCBI nr
Match:
XP_023541252.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 591/598 (98.83%), Postives = 594/598 (99.33%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
MAISCIPTSQFAL+KPK EFINQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 61 LINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
LINFCTRNPT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
Query: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 241 LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA 300
LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA
Sbjct: 241 LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA 300
Query: 301 FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITP 360
FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLV+EGRGYFYSMYKNHGITP
Sbjct: 301 FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYKNHGITP 360
Query: 361 GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI 420
GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI
Sbjct: 361 GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI 420
Query: 421 FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSG 480
FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGV KVPGCSSVEVNNVVHEFFSG
Sbjct: 421 FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSG 480
Query: 481 DGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL 540
DGVHSISVELRRALDELIKEIKLAGY PDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL
Sbjct: 481 DGVHSISVELRRALDELIKEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL 540
Query: 541 LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW
Sbjct: 541 LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Carg17272 vs. NCBI nr
Match:
XP_022944804.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 588/598 (98.33%), Postives = 591/598 (98.83%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
MAISCIPTSQFAL+KPK E INQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALSKPKNESINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 61 LINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
LINFCTR+PTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYL+FSLFAQVL SGL
Sbjct: 61 LINFCTRSPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLIFSLFAQVLFSGL 120
Query: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLG GHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDMNAARG 180
Query: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 241 LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA 300
LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA
Sbjct: 241 LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA 300
Query: 301 FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITP 360
FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEG GYFYSMYKNHGITP
Sbjct: 301 FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGTGYFYSMYKNHGITP 360
Query: 361 GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI 420
GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI
Sbjct: 361 GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI 420
Query: 421 FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSG 480
FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGV KVPGCSSVEVNNVVHEFFSG
Sbjct: 421 FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSG 480
Query: 481 DGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL 540
DGVHSISVELRRALDELIKEIKLAGY PDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL
Sbjct: 481 DGVHSISVELRRALDELIKEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL 540
Query: 541 LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW
Sbjct: 541 LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Carg17272 vs. NCBI nr
Match:
XP_022968061.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 568/598 (94.98%), Postives = 571/598 (95.48%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
MAISCIPT QFALTKPK EFINQPHPLSLFSKC SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTCQFALTKPKNEFINQPHPLSLFSKCASLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 61 LINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
LINFCTR PTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRYPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLG GHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDMNAARG 180
Query: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 241 LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVA 300
LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAM
Sbjct: 241 LDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMXXX 300
Query: 301 FATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITP 360
KKAGVRPDEITFLGLLYACSHAGLV+EGRGYFYSMYKNHG+TP
Sbjct: 301 XXXXXXXXXXXXXXXXXKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYKNHGMTP 360
Query: 361 GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI 420
GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI
Sbjct: 361 GIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERI 420
Query: 421 FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSG 480
FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGV KVPGCSSVEVNNVVHEFFSG
Sbjct: 421 FELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSG 480
Query: 481 DGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL 540
DGVHSISVELRRALDELI+EIKLAGY PDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL
Sbjct: 481 DGVHSISVELRRALDELIQEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGL 540
Query: 541 LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW
Sbjct: 541 LNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Carg17272 vs. NCBI nr
Match:
XP_008446357.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis melo])
HSP 1 Score: 1099.3 bits (2842), Expect = 0.0e+00
Identity = 532/604 (88.08%), Postives = 565/604 (93.54%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKP-----KKEF-INQPHPLSLFSKCTSLRELKQIQAYTIKTNLHND 60
MAISCIPT QF LTKP K EF INQ HPLSL SKCTSL+ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 120
ISVLTKLINFCT NPTTS MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 121 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 180
+LCSGLLPDDYTFSSLLKACA SKAL +G LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYK 360
SAMIVAFATHGDGLK+IS+FEEMK+AGVRPDEITFLGLLYACSHAGLV++GRGYFYSM +
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360
Query: 361 NHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAK 420
+GITPGIKHYGCMVDLLGRTG LDEAY F+DEL IKPTPILWRTLLSACS HGNV++AK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVV 480
RVIERIFELDDSHGGDYVILSNL AR+GRWEDVN LRKLMKDRGV KVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKL 540
HEFFSGDGVH +SVELRRALDEL+KEIKL GY PDTSLVYHADM+EE KELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 599
AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+IVIRDVQRFH+FEDG+CSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600
BLAST of Carg17272 vs. NCBI nr
Match:
KGN51922.1 (hypothetical protein Csa_5G605160 [Cucumis sativus])
HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 532/604 (88.08%), Postives = 560/604 (92.72%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKP-----KKEF-INQPHPLSLFSKCTSLRELKQIQAYTIKTNLHND 60
MAISCIPT QF LTKP K EF INQ HPLSL SKCTSL ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 120
ISVLTKLINFCT NPTTS MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLF +
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120
Query: 121 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 180
+LCSGLLPDDYTFSSLLKACA SKAL EG LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYK 360
SAMIVAFATHGDGLKAISMFEEMK+ GVRPDEITFLGLLYACSHAGLV++GRGYFYSM K
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
Query: 361 NHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAK 420
+GITPGIKHYGCMVDLLGR G LDEAY F+D+L IK TPILWRTLLSACS HGNV++AK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVV 480
RVIERIFELDD+HGGDYVILSNL AR+GRWEDVN LRKLMKDRGV KVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKL 540
HEFFSGDGVH +SVELRRALDEL+KEIKL GY PDTSLVYHADMEEE KELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 599
AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+IVIRDVQRFHRFEDG+CSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
BLAST of Carg17272 vs. TAIR10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 800.8 bits (2067), Expect = 5.7e-232
Identity = 379/582 (65.12%), Postives = 460/582 (79.04%), Query Frame = 0
Query: 17 KKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMDH 76
K + +N +P+ L SKC SLREL QIQAY IK+++ D+S + KLINFCT +PT SSM +
Sbjct: 23 KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSY 82
Query: 77 AHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAG 136
A HLF+ M + DIV+FN MARGY+R +P VFSLF ++L G+LPD+YTF SLLKACA
Sbjct: 83 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 142
Query: 137 SKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAI 196
+KALEEGRQLHC ++KLGL N+Y+CPTLINMY C D+++AR VFD + EPC+V YNA+
Sbjct: 143 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 202
Query: 197 ITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGF 256
ITGYAR ++PNEALSLFRE+Q L+P ++T+LS++ SCALLG+LDLG+WIH+Y KK F
Sbjct: 203 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 262
Query: 257 DKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEE 316
K+VKVNTALIDM+AKCGS+ DA+SIFE MR +DTQAWS
Sbjct: 263 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSXXXXXXXXXXXXXXXXXXXXX 322
Query: 317 MKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTG 376
+PDEITFLGLL ACSH G V+EGR YF M GI P IKHYG MVDLL R G
Sbjct: 323 XXXXXXQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 382
Query: 377 RLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSN 436
L++AY+FID+L I PTP+LWR LL+ACS+H N+DLA++V ERIFELDDSHGGDYVILSN
Sbjct: 383 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 442
Query: 437 LCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDE 496
L AR +WE V+ LRK+MKDR KVPGCSS+EVNNVVHEFFSGDGV S + +L RALDE
Sbjct: 443 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 502
Query: 497 LIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLR 556
++KE+KL+GY PDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPPGTTIRVVKNLR
Sbjct: 503 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 562
Query: 557 ICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
+C DCHNAAKLISLIFGR++V+RDVQRFH FEDG+CSC DFW
Sbjct: 563 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of Carg17272 vs. TAIR10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 489.2 bits (1258), Expect = 3.6e-138
Identity = 265/742 (35.71%), Postives = 392/742 (52.83%), Query Frame = 0
Query: 1 MAISC----IPTSQF------ALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTN 60
M +SC +P+S + + + P + I LSL C +L+ L+ I A IK
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 61 LHNDISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFS 120
LHN L+KLI FC +P + +A +F + + +++++N M RG+A S+ P
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 121 LFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKL----------------- 180
L+ ++ GLLP+ YTF +LK+CA SKA +EG+Q+H +KL
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 181 ------------------------------------------------------------ 240
Sbjct: 181 QNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 -------------------------------------------------------GLGHN 300
G G N
Sbjct: 241 XXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 301 IYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQA 360
+ I LI++Y+ C ++ A G+F+ + ++S+N +I GY + EAL LF+E+
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 361 SNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKK--KGFDKFVKVNTALIDMYAKCGSI 420
S P DVTMLSI+ +CA LGA+D+GRWIH Y+ K KG + T+LIDMYAKCG I
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 421 VDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYAC 480
A +F + + +W+AMI FA HG + +F M+K G++PD+ITF+GLL AC
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Query: 481 SHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPIL 540
SH+G++D GR F +M +++ +TP ++HYGCM+DLLG +G EA + I+ + ++P ++
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI 540
Query: 541 WRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKD 599
W +LL AC HGNV+L + E + +++ + G YV+LSN+ A GRW +V + R L+ D
Sbjct: 541 WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND 600
BLAST of Carg17272 vs. TAIR10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 488.4 bits (1256), Expect = 6.2e-138
Identity = 242/582 (41.58%), Postives = 363/582 (62.37%), Query Frame = 0
Query: 17 KKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMDH 76
K FI L S + K+I Y +++ + +++ T L++ + S++
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK---CGSLET 292
Query: 77 AHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAG 136
A LFD ML++++V +N M Y ++ +P +F ++L G+ P D + L ACA
Sbjct: 293 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 352
Query: 137 SKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAI 196
LE GR +H +++LGL N+ + +LI+MY C +++ A +F ++ +VS+NA+
Sbjct: 353 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 412
Query: 197 ITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGF 256
I G+A++ +P +AL+ F ++++ ++P T +S+I + A L +WIH V +
Sbjct: 413 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 472
Query: 257 DKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEE 316
DK V V TAL+DMYAKCG+I+ A IF+ M R W+AMI + THG G A+ +FEE
Sbjct: 473 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 532
Query: 317 MKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTG 376
M+K ++P+ +TFL ++ ACSH+GLV+ G FY M +N+ I + HYG MVDLLGR G
Sbjct: 533 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 592
Query: 377 RLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSN 436
RL+EA+ FI ++ +KP ++ +L AC H NV+ A++ ER+FEL+ GG +V+L+N
Sbjct: 593 RLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 652
Query: 437 LCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDE 496
+ WE V ++R M +G+ K PGCS VE+ N VH FFSG H S ++ L++
Sbjct: 653 IYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK 712
Query: 497 LIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLR 556
LI IK AGY PDT+LV +E + KE +L HSEKLA++FGLLNT GTTI V KNLR
Sbjct: 713 LICHIKEAGYVPDTNLV--LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 772
Query: 557 ICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
+C DCHNA K ISL+ GR+IV+RD+QRFH F++G CSC D+W
Sbjct: 773 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Carg17272 vs. TAIR10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 462.2 bits (1188), Expect = 4.8e-130
Identity = 243/626 (38.82%), Postives = 360/626 (57.51%), Query Frame = 0
Query: 25 HPLSLF---SKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFC-TRNPTTSSMDHAHHL 84
HP SLF + C ++R+L QI A IK+ D +++ FC T + +D+AH +
Sbjct: 22 HPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81
Query: 85 FDKMLDKDIVLFNIMARGYARS--NSPYLVFSLFAQVLCSGLL-PDDYTFSSLLKACAGS 144
F++M ++ +N + RG++ S + + +LF +++ + P+ +TF S+LKACA +
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 145 KALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVF--------------D 204
++EG+Q+H A+K G G + ++ L+ MY C M AR +F
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201
Query: 205 GMEEPCIVSYNAIITGYARSSQPNEALSLF------------------------------ 264
+ IV +N +I GY R A LF
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
Query: 265 -RELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAK 324
++ P VT++S++ + + LG+L+LG W+H Y + G + +ALIDMY+K
Sbjct: 262 XXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321
Query: 325 CGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGL 384
CG I AI +FE + + WSAMI FA HG AI F +M++AGVRP ++ ++ L
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 385 LYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKP 444
L ACSH GLV+EGR YF M G+ P I+HYGCMVDLLGR+G LDEA +FI + IKP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 445 TPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRK 504
++W+ LL AC GNV++ KRV + ++ G YV LSN+ A G W +V+ +R
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 505 LMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIKEIKLAGYAPDTSL 564
MK++ + K PGCS ++++ V+HEF D H + E+ L E+ +++LAGY P T+
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561
Query: 565 VYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIF 599
V ++EEE KE VL YHSEK+A AFGL++T PG IR+VKNLRIC DCH++ KLIS ++
Sbjct: 562 VL-LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 621
BLAST of Carg17272 vs. TAIR10
Match:
AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 461.5 bits (1186), Expect = 8.1e-130
Identity = 236/587 (40.20%), Postives = 357/587 (60.82%), Query Frame = 0
Query: 28 SLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDK 87
SL C+ + +LKQ+ A+T++T + + L + + S +++A +FD + +
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 88 DIVLFNIMARGYARSNS-PYLVFSLFAQVLCSG-LLPDDYTFSSLLKACAGSKALEEGRQ 147
++N + R A S F L+ ++L G PD +TF +LKACA EG+Q
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 148 LHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQ 207
+HC +K G G ++Y+ LI++Y +C ++ AR VFD M E +VS+N++I R +
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 208 PNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKK---GFDKFVKV 267
+ AL LFRE+Q S EP TM S++ +CA LG+L LG W H ++ +K V V
Sbjct: 233 YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 292
Query: 268 NTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEM--KKA 327
+LI+MY KCGS+ A +F+GM+ RD +W+AMI+ FATHG +A++ F+ M K+
Sbjct: 293 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 352
Query: 328 GVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDE 387
VRP+ +TF+GLL AC+H G V++GR YF M +++ I P ++HYGC+VDL+ R G + E
Sbjct: 353 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 412
Query: 388 AYKFIDELAIKPTPILWRTLLSACSNHG-NVDLAKRVIERIF----ELDDSHG---GDYV 447
A + + +KP ++WR+LL AC G +V+L++ + I + + S+G G YV
Sbjct: 413 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 472
Query: 448 ILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRR 507
+LS + A RW DV +RKLM + G+ K PGCSS+E+N + HEFF+GD H + ++ +
Sbjct: 473 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 532
Query: 508 ALDELIKEIKLAGYAPDTSLVYHADMEEE-AKELVLRYHSEKLAMAFGLLNTPPGTTIRV 567
L + ++ GY PD S D + +KE LR HSE+LA+AFGL+N PP T IR+
Sbjct: 533 QLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRI 592
Query: 568 VKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
KNLR+C DCH KLIS +F +I++RD RFH F+DG CSC D+W
Sbjct: 593 FKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
BLAST of Carg17272 vs. Swiss-Prot
Match:
sp|Q8LK93|PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 800.8 bits (2067), Expect = 1.0e-230
Identity = 379/582 (65.12%), Postives = 460/582 (79.04%), Query Frame = 0
Query: 17 KKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMDH 76
K + +N +P+ L SKC SLREL QIQAY IK+++ D+S + KLINFCT +PT SSM +
Sbjct: 23 KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSY 82
Query: 77 AHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAG 136
A HLF+ M + DIV+FN MARGY+R +P VFSLF ++L G+LPD+YTF SLLKACA
Sbjct: 83 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 142
Query: 137 SKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAI 196
+KALEEGRQLHC ++KLGL N+Y+CPTLINMY C D+++AR VFD + EPC+V YNA+
Sbjct: 143 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 202
Query: 197 ITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGF 256
ITGYAR ++PNEALSLFRE+Q L+P ++T+LS++ SCALLG+LDLG+WIH+Y KK F
Sbjct: 203 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 262
Query: 257 DKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEE 316
K+VKVNTALIDM+AKCGS+ DA+SIFE MR +DTQAWS
Sbjct: 263 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSXXXXXXXXXXXXXXXXXXXXX 322
Query: 317 MKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTG 376
+PDEITFLGLL ACSH G V+EGR YF M GI P IKHYG MVDLL R G
Sbjct: 323 XXXXXXQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 382
Query: 377 RLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSN 436
L++AY+FID+L I PTP+LWR LL+ACS+H N+DLA++V ERIFELDDSHGGDYVILSN
Sbjct: 383 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 442
Query: 437 LCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDE 496
L AR +WE V+ LRK+MKDR KVPGCSS+EVNNVVHEFFSGDGV S + +L RALDE
Sbjct: 443 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 502
Query: 497 LIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLR 556
++KE+KL+GY PDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPPGTTIRVVKNLR
Sbjct: 503 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 562
Query: 557 ICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
+C DCHNAAKLISLIFGR++V+RDVQRFH FEDG+CSC DFW
Sbjct: 563 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of Carg17272 vs. Swiss-Prot
Match:
sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 489.2 bits (1258), Expect = 6.6e-137
Identity = 265/742 (35.71%), Postives = 392/742 (52.83%), Query Frame = 0
Query: 1 MAISC----IPTSQF------ALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTN 60
M +SC +P+S + + + P + I LSL C +L+ L+ I A IK
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 61 LHNDISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFS 120
LHN L+KLI FC +P + +A +F + + +++++N M RG+A S+ P
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 121 LFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKL----------------- 180
L+ ++ GLLP+ YTF +LK+CA SKA +EG+Q+H +KL
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 181 ------------------------------------------------------------ 240
Sbjct: 181 QNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 -------------------------------------------------------GLGHN 300
G G N
Sbjct: 241 XXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 301 IYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQA 360
+ I LI++Y+ C ++ A G+F+ + ++S+N +I GY + EAL LF+E+
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 361 SNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKK--KGFDKFVKVNTALIDMYAKCGSI 420
S P DVTMLSI+ +CA LGA+D+GRWIH Y+ K KG + T+LIDMYAKCG I
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 421 VDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYAC 480
A +F + + +W+AMI FA HG + +F M+K G++PD+ITF+GLL AC
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Query: 481 SHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPIL 540
SH+G++D GR F +M +++ +TP ++HYGCM+DLLG +G EA + I+ + ++P ++
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI 540
Query: 541 WRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKD 599
W +LL AC HGNV+L + E + +++ + G YV+LSN+ A GRW +V + R L+ D
Sbjct: 541 WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND 600
BLAST of Carg17272 vs. Swiss-Prot
Match:
sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-136
Identity = 242/582 (41.58%), Postives = 363/582 (62.37%), Query Frame = 0
Query: 17 KKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMDH 76
K FI L S + K+I Y +++ + +++ T L++ + S++
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK---CGSLET 292
Query: 77 AHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAG 136
A LFD ML++++V +N M Y ++ +P +F ++L G+ P D + L ACA
Sbjct: 293 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 352
Query: 137 SKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAI 196
LE GR +H +++LGL N+ + +LI+MY C +++ A +F ++ +VS+NA+
Sbjct: 353 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 412
Query: 197 ITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGF 256
I G+A++ +P +AL+ F ++++ ++P T +S+I + A L +WIH V +
Sbjct: 413 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 472
Query: 257 DKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEE 316
DK V V TAL+DMYAKCG+I+ A IF+ M R W+AMI + THG G A+ +FEE
Sbjct: 473 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 532
Query: 317 MKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTG 376
M+K ++P+ +TFL ++ ACSH+GLV+ G FY M +N+ I + HYG MVDLLGR G
Sbjct: 533 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 592
Query: 377 RLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSN 436
RL+EA+ FI ++ +KP ++ +L AC H NV+ A++ ER+FEL+ GG +V+L+N
Sbjct: 593 RLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 652
Query: 437 LCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDE 496
+ WE V ++R M +G+ K PGCS VE+ N VH FFSG H S ++ L++
Sbjct: 653 IYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK 712
Query: 497 LIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLR 556
LI IK AGY PDT+LV +E + KE +L HSEKLA++FGLLNT GTTI V KNLR
Sbjct: 713 LICHIKEAGYVPDTNLV--LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 772
Query: 557 ICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
+C DCHNA K ISL+ GR+IV+RD+QRFH F++G CSC D+W
Sbjct: 773 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Carg17272 vs. Swiss-Prot
Match:
sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 462.2 bits (1188), Expect = 8.6e-129
Identity = 243/626 (38.82%), Postives = 360/626 (57.51%), Query Frame = 0
Query: 25 HPLSLF---SKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFC-TRNPTTSSMDHAHHL 84
HP SLF + C ++R+L QI A IK+ D +++ FC T + +D+AH +
Sbjct: 22 HPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81
Query: 85 FDKMLDKDIVLFNIMARGYARS--NSPYLVFSLFAQVLCSGLL-PDDYTFSSLLKACAGS 144
F++M ++ +N + RG++ S + + +LF +++ + P+ +TF S+LKACA +
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 145 KALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVF--------------D 204
++EG+Q+H A+K G G + ++ L+ MY C M AR +F
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201
Query: 205 GMEEPCIVSYNAIITGYARSSQPNEALSLF------------------------------ 264
+ IV +N +I GY R A LF
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
Query: 265 -RELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAK 324
++ P VT++S++ + + LG+L+LG W+H Y + G + +ALIDMY+K
Sbjct: 262 XXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321
Query: 325 CGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGL 384
CG I AI +FE + + WSAMI FA HG AI F +M++AGVRP ++ ++ L
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 385 LYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKP 444
L ACSH GLV+EGR YF M G+ P I+HYGCMVDLLGR+G LDEA +FI + IKP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 445 TPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRK 504
++W+ LL AC GNV++ KRV + ++ G YV LSN+ A G W +V+ +R
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 505 LMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIKEIKLAGYAPDTSL 564
MK++ + K PGCS ++++ V+HEF D H + E+ L E+ +++LAGY P T+
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561
Query: 565 VYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIF 599
V ++EEE KE VL YHSEK+A AFGL++T PG IR+VKNLRIC DCH++ KLIS ++
Sbjct: 562 VL-LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 621
BLAST of Carg17272 vs. Swiss-Prot
Match:
sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)
HSP 1 Score: 461.5 bits (1186), Expect = 1.5e-128
Identity = 236/587 (40.20%), Postives = 357/587 (60.82%), Query Frame = 0
Query: 28 SLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDK 87
SL C+ + +LKQ+ A+T++T + + L + + S +++A +FD + +
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 88 DIVLFNIMARGYARSNS-PYLVFSLFAQVLCSG-LLPDDYTFSSLLKACAGSKALEEGRQ 147
++N + R A S F L+ ++L G PD +TF +LKACA EG+Q
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 148 LHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQ 207
+HC +K G G ++Y+ LI++Y +C ++ AR VFD M E +VS+N++I R +
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 208 PNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKK---GFDKFVKV 267
+ AL LFRE+Q S EP TM S++ +CA LG+L LG W H ++ +K V V
Sbjct: 233 YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 292
Query: 268 NTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEM--KKA 327
+LI+MY KCGS+ A +F+GM+ RD +W+AMI+ FATHG +A++ F+ M K+
Sbjct: 293 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 352
Query: 328 GVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDE 387
VRP+ +TF+GLL AC+H G V++GR YF M +++ I P ++HYGC+VDL+ R G + E
Sbjct: 353 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 412
Query: 388 AYKFIDELAIKPTPILWRTLLSACSNHG-NVDLAKRVIERIF----ELDDSHG---GDYV 447
A + + +KP ++WR+LL AC G +V+L++ + I + + S+G G YV
Sbjct: 413 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 472
Query: 448 ILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRR 507
+LS + A RW DV +RKLM + G+ K PGCSS+E+N + HEFF+GD H + ++ +
Sbjct: 473 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 532
Query: 508 ALDELIKEIKLAGYAPDTSLVYHADMEEE-AKELVLRYHSEKLAMAFGLLNTPPGTTIRV 567
L + ++ GY PD S D + +KE LR HSE+LA+AFGL+N PP T IR+
Sbjct: 533 QLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRI 592
Query: 568 VKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
KNLR+C DCH KLIS +F +I++RD RFH F+DG CSC D+W
Sbjct: 593 FKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
BLAST of Carg17272 vs. TrEMBL
Match:
tr|A0A1S3BFK0|A0A1S3BFK0_CUCME (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489124 PE=4 SV=1)
HSP 1 Score: 1099.3 bits (2842), Expect = 0.0e+00
Identity = 532/604 (88.08%), Postives = 565/604 (93.54%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKP-----KKEF-INQPHPLSLFSKCTSLRELKQIQAYTIKTNLHND 60
MAISCIPT QF LTKP K EF INQ HPLSL SKCTSL+ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 120
ISVLTKLINFCT NPTTS MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 121 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 180
+LCSGLLPDDYTFSSLLKACA SKAL +G LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYK 360
SAMIVAFATHGDGLK+IS+FEEMK+AGVRPDEITFLGLLYACSHAGLV++GRGYFYSM +
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360
Query: 361 NHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAK 420
+GITPGIKHYGCMVDLLGRTG LDEAY F+DEL IKPTPILWRTLLSACS HGNV++AK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVV 480
RVIERIFELDDSHGGDYVILSNL AR+GRWEDVN LRKLMKDRGV KVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKL 540
HEFFSGDGVH +SVELRRALDEL+KEIKL GY PDTSLVYHADM+EE KELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 599
AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+IVIRDVQRFH+FEDG+CSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600
BLAST of Carg17272 vs. TrEMBL
Match:
tr|A0A0A0KU15|A0A0A0KU15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605160 PE=4 SV=1)
HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 532/604 (88.08%), Postives = 560/604 (92.72%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKP-----KKEF-INQPHPLSLFSKCTSLRELKQIQAYTIKTNLHND 60
MAISCIPT QF LTKP K EF INQ HPLSL SKCTSL ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60
Query: 61 ISVLTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 120
ISVLTKLINFCT NPTTS MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLF +
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120
Query: 121 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 180
+LCSGLLPDDYTFSSLLKACA SKAL EG LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 181 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
Query: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAW 300
CALLGALDLG+WIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 301 SAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYK 360
SAMIVAFATHGDGLKAISMFEEMK+ GVRPDEITFLGLLYACSHAGLV++GRGYFYSM K
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
Query: 361 NHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAK 420
+GITPGIKHYGCMVDLLGR G LDEAY F+D+L IK TPILWRTLLSACS HGNV++AK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420
Query: 421 RVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVV 480
RVIERIFELDD+HGGDYVILSNL AR+GRWEDVN LRKLMKDRGV KVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 481 HEFFSGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKL 540
HEFFSGDGVH +SVELRRALDEL+KEIKL GY PDTSLVYHADMEEE KELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 599
AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+IVIRDVQRFHRFEDG+CSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
BLAST of Carg17272 vs. TrEMBL
Match:
tr|D7TN78|D7TN78_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g02510 PE=4 SV=1)
HSP 1 Score: 946.8 bits (2446), Expect = 2.3e-272
Identity = 439/583 (75.30%), Postives = 509/583 (87.31%), Query Frame = 0
Query: 16 PKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTTSSMD 75
P N HPLSL KCTSLRELKQ+QA+ IKT+LH+D+SVLTK INFC+ NPTT+SM
Sbjct: 13 PPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQ 72
Query: 76 HAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACA 135
HAHHLFD++ DIVLFN MARGYAR+++P F+LF Q+L SGL PDDYTF SLLKACA
Sbjct: 73 HAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACA 132
Query: 136 GSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNA 195
KALEEGRQLHC AIKLGL N+Y+CPTLINMY ACN+M+ AR VFD + EPC+V+YNA
Sbjct: 133 SCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA 192
Query: 196 IITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKG 255
+ITGYAR S+PNEALSLFRELQA NL+PTDVTMLS++ SCALLGALDLG+W+HEYVKK G
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252
Query: 256 FDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFE 315
F++FVKV+TALIDMYAKCGS+ DA+ +FE M VRDTQAWSAMI+A+A HG GLKA+S+F+
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFK 312
Query: 316 EMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRT 375
EM+KAG PDEITFLGLLYACSH GLV+EG YFY M +G+ PGIKHYGCMVDLLGR
Sbjct: 313 EMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRA 372
Query: 376 GRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILS 435
GRL+EAY+FI L I+PTPILWRTLLSAC +HGNV+L KRVIE+IFELDDSHGGDY+ILS
Sbjct: 373 GRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILS 432
Query: 436 NLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALD 495
NLCAR GRWEDVN +RKLM +RGV K+PGCSSVEVNNVVHEFFSGDGVHS+S +L +ALD
Sbjct: 433 NLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALD 492
Query: 496 ELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNL 555
EL+KE+KL GY P+TSLV+HADME+E KE+ LRYHSEKLA+ FGLLNTPPGTTIRVVKNL
Sbjct: 493 ELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNL 552
Query: 556 RICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
R+CGDCH+AAKLISLIF RQI++RDVQRFH F+DG+CSC D+W
Sbjct: 553 RVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
BLAST of Carg17272 vs. TrEMBL
Match:
tr|A0A0L9USR2|A0A0L9USR2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g106700 PE=4 SV=1)
HSP 1 Score: 924.9 bits (2389), Expect = 9.5e-266
Identity = 443/600 (73.83%), Postives = 508/600 (84.67%), Query Frame = 0
Query: 1 MAISCIPTSQFALTKPKKEFINQPHP--LSLFSKCTSLRELKQIQAYTIKTNLHNDISVL 60
MA+S + + + E QP P LSL KCTSLRELKQIQAYTIKT+LHN +VL
Sbjct: 1 MAMSILQCISHSPIEVNIEVALQPSPSILSLIPKCTSLRELKQIQAYTIKTHLHNTHTVL 60
Query: 61 TKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCS 120
TKLINFCT NPTT+SMDHAH +FD++ DI+LFN MARGYAR + P LF QVL S
Sbjct: 61 TKLINFCTSNPTTASMDHAHQIFDQIPHPDIILFNTMARGYARFDDPLRAILLFCQVLFS 120
Query: 121 GLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAA 180
GLLPDDYTFSSL KACA KAL+EG+QLHC A KLG+ N+Y+CPTLINMY ACNDM+AA
Sbjct: 121 GLLPDDYTFSSLFKACARLKALQEGKQLHCLAFKLGVSGNMYVCPTLINMYTACNDMDAA 180
Query: 181 RGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALL 240
R VFD ++EPC+V+YNAIIT ARSSQPNEAL+LFRELQ S L+PTDVTML + SCALL
Sbjct: 181 RRVFDKIDEPCVVAYNAIITSCARSSQPNEALALFRELQESGLKPTDVTMLVALSSCALL 240
Query: 241 GALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMI 300
GALDLG+WIHEYVKK GFD++VKVNTALIDMYAKCGS+ DA+S+F M RDTQAWSAMI
Sbjct: 241 GALDLGKWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLEDAVSVFREMPRRDTQAWSAMI 300
Query: 301 VAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGI 360
V +ATHG G +A+SM EEMKKA V+PDEI+FLG+LYACSH GLV+EG +FYSM +GI
Sbjct: 301 VGYATHGHGSQALSMLEEMKKAKVQPDEISFLGILYACSHNGLVEEGYDHFYSMIHEYGI 360
Query: 361 TPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIE 420
P IKHYGCMVDLLGR GRL+EAYKFIDEL IKPTPILWRTLLS+CS+HGNV++AK+VIE
Sbjct: 361 VPSIKHYGCMVDLLGRAGRLEEAYKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKQVIE 420
Query: 421 RIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFF 480
RIFELDDSHGGDYVILSNLCAR GRW+DVN LRK M D+G KVPGCSS+EVNNVVHEFF
Sbjct: 421 RIFELDDSHGGDYVILSNLCARNGRWDDVNYLRKTMADKGAMKVPGCSSIEVNNVVHEFF 480
Query: 481 SGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAF 540
+GDGV S S L RALDEL+KE+KLAGY PDTSLV++AD+E+E KE+VLRYHSEKLA+ +
Sbjct: 481 AGDGVRSTSTVLHRALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITY 540
Query: 541 GLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
GLLNTPPGTTIRVVKNLR+C DCHNAAK ISLIFGRQI++RDVQRFH F+DG+CSC D+W
Sbjct: 541 GLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 600
BLAST of Carg17272 vs. TrEMBL
Match:
tr|V4TQ07|V4TQ07_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031011mg PE=4 SV=1)
HSP 1 Score: 924.5 bits (2388), Expect = 1.2e-265
Identity = 439/594 (73.91%), Postives = 506/594 (85.19%), Query Frame = 0
Query: 7 PTSQFALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTKLINFCT 66
P+ + P K N P+ LSL +CTS R LKQI A TIKT+L ND++VLTKLINFCT
Sbjct: 5 PSPPITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCT 64
Query: 67 RNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYT 126
+NPTTSSM+HAH LFD++ + DIVLFN MARGY+RS +P LF ++L SGLLPDDY+
Sbjct: 65 QNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYS 124
Query: 127 FSSLLKACA--GSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDG 186
F SLLKACA G++ALEEG+QLHCFAIKLGL N+Y+C TLIN+YA C+D+ AAR +F+
Sbjct: 125 FPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFEN 184
Query: 187 MEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLG 246
+ EPC+VSYNAIIT YARSS+PNEALSLFRELQ NL+PTDVTMLS + SCALLG+LDLG
Sbjct: 185 ISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLG 244
Query: 247 RWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAFATH 306
+WIHEY+KK G DK+VKVNTALIDM+AKCG + DA+S+F+ M +DTQAWSAMIVA+ATH
Sbjct: 245 KWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATH 304
Query: 307 GDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHGITPGIKH 366
G G K+I MFEEM KA V PDEITFLGLLYACSH GLVDEG YFYSM +GI PGIKH
Sbjct: 305 GQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKH 364
Query: 367 YGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELD 426
YGCMVDLLGR GRLDEAY+FIDEL IK TPILWRTLLS+CS+H N+ LAK+VIERIFELD
Sbjct: 365 YGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELD 424
Query: 427 DSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEFFSGDGVH 486
DSHGGDYVILSNLCAR GRWEDV+ LRKLMKDRGV KVPGCSS+EVNNVV EFFSGDGVH
Sbjct: 425 DSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVH 484
Query: 487 SISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTP 546
S S +L++ALDEL+KE+K+ GY PDTSLV+H DME+E KE+ LRYHSEKLA+ FGLLNTP
Sbjct: 485 SYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTP 544
Query: 547 PGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 599
PGTTIRVVKNLR+CGDCH+AAK+ISLIF RQIV+RDVQRFH F DG+CSC DFW
Sbjct: 545 PGTTIRVVKNLRVCGDCHSAAKIISLIFNRQIVLRDVQRFHHFRDGKCSCGDFW 598
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023541252.1 | 0.0e+00 | 98.83 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
| XP_022944804.1 | 0.0e+00 | 98.33 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
| XP_022968061.1 | 0.0e+00 | 94.98 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
| XP_008446357.1 | 0.0e+00 | 88.08 | PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic ... | [more] |
| KGN51922.1 | 0.0e+00 | 88.08 | hypothetical protein Csa_5G605160 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G02980.1 | 5.7e-232 | 65.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G08070.1 | 3.6e-138 | 35.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G11290.1 | 6.2e-138 | 41.58 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G48910.1 | 4.8e-130 | 38.82 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G59720.1 | 8.1e-130 | 40.20 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
