Carg16439 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGAATCAAAACATATTGAAAACCAAATCTCAGCTGTTGATTGCAGTAGCGTTAATGGCGATGGCGACGAGACTCGTAAAAGAATCGCGACGGCCGAAATCAGGCGCGATGATGATGATGACGACGACGACGACGACGACGATGACGATGGAAAAATGGAGATCGGTAAAAAAGGCTTTGGAAAAGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGTGTAGGATTAAGAGGACCTCTTCTTGTTCTTCTTCGATTTTTAGTATTACAAGAACAAATTCTTGGGATAAGAGTGTTTATGATGCGAGTGTAAATCAAGGCTGTGGTTTCTGTTTTGCGAAACATTCAATTTCAGATTCTAAGAATGGATCTCCGACTGATCCGAATCATCCGAAGTTCACTGATGAAATGTTGAAAGTTCTTATTGAAAAGAATGATTTCTATTCCAAAGAATCCAATCCTCATTTGGGTATATTCCTCGTTCTTCTTGTTCATATATCTTGA ATGTTCGAATCAAAACATATTGAAAACCAAATCTCAGCTGTTGATTGCAGTAGCGTTAATGGCGATGGCGACGAGACTCGTAAAAGAATCGCGACGGCCGAAATCAGGCGCGATGATGATGATGACGACGACGACGACGACGACGATGACGATGGAAAAATGGAGATCGGTAAAAAAGGCTTTGGAAAAGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGTGTAGGATTAAGAGGACCTCTTCTTGTTCTTCTTCGATTTTTAGTATTACAAGAACAAATTCTTGGGATAAGAGTGTTTATGATGCGAGTGTAAATCAAGGCTGTGGTTTCTGTTTTGCGAAACATTCAATTTCAGATTCTAAGAATGGATCTCCGACTGATCCGAATCATCCGAAGTTCACTGATGAAATGTTGAAAGTTCTTATTGAAAAGAATGATTTCTATTCCAAAGAATCCAATCCTCATTTGGGTATATTCCTCGTTCTTCTTGTTCATATATCTTGA ATGTTCGAATCAAAACATATTGAAAACCAAATCTCAGCTGTTGATTGCAGTAGCGTTAATGGCGATGGCGACGAGACTCGTAAAAGAATCGCGACGGCCGAAATCAGGCGCGATGATGATGATGACGACGACGACGACGACGACGATGACGATGGAAAAATGGAGATCGGTAAAAAAGGCTTTGGAAAAGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGTGTAGGATTAAGAGGACCTCTTCTTGTTCTTCTTCGATTTTTAGTATTACAAGAACAAATTCTTGGGATAAGAGTGTTTATGATGCGAGTGTAAATCAAGGCTGTGGTTTCTGTTTTGCGAAACATTCAATTTCAGATTCTAAGAATGGATCTCCGACTGATCCGAATCATCCGAAGTTCACTGATGAAATGTTGAAAGTTCTTATTGAAAAGAATGATTTCTATTCCAAAGAATCCAATCCTCATTTGGGTATATTCCTCGTTCTTCTTGTTCATATATCTTGA MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFLVLLVHIS
BLAST of Carg16439 vs. NCBI nr
Match: XP_022937511.1 (uncharacterized protein LOC111443901 [Cucurbita moschata] >XP_022937513.1 uncharacterized protein LOC111443901 [Cucurbita moschata]) HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73 Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of Carg16439 vs. NCBI nr
Match: XP_022969627.1 (uncharacterized protein LOC111468598 [Cucurbita maxima]) HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72 Identity = 163/169 (96.45%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of Carg16439 vs. NCBI nr
Match: XP_023537897.1 (uncharacterized protein LOC111798795 [Cucurbita pepo subsp. pepo] >XP_023537898.1 uncharacterized protein LOC111798795 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72 Identity = 163/169 (96.45%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of Carg16439 vs. NCBI nr
Match: XP_008452984.1 (PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 3.7e-44 Identity = 105/175 (60.00%), Postives = 111/175 (63.43%), Query Frame = 0
BLAST of Carg16439 vs. NCBI nr
Match: XP_004144798.2 (PREDICTED: uncharacterized protein LOC101216013 [Cucumis sativus] >XP_011648888.1 PREDICTED: uncharacterized protein LOC101216013 [Cucumis sativus] >KGN61038.1 hypothetical protein Csa_2G035380 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 2.6e-42 Identity = 101/169 (59.76%), Postives = 107/169 (63.31%), Query Frame = 0
BLAST of Carg16439 vs. TAIR10
Match: AT5G26720.1 (unknown protein) HSP 1 Score: 45.1 bits (105), Expect = 5.3e-05 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
BLAST of Carg16439 vs. TrEMBL
Match: tr|A0A1S3BWA1|A0A1S3BWA1_CUCME (uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44 Identity = 105/175 (60.00%), Postives = 111/175 (63.43%), Query Frame = 0
BLAST of Carg16439 vs. TrEMBL
Match: tr|A0A0A0LH19|A0A0A0LH19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.7e-42 Identity = 101/169 (59.76%), Postives = 107/169 (63.31%), Query Frame = 0
BLAST of Carg16439 vs. TrEMBL
Match: tr|A0A2N9FR33|A0A2N9FR33_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17096 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 6.9e-15 Identity = 51/107 (47.66%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of Carg16439 vs. TrEMBL
Match: tr|M5WD38|M5WD38_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G302400 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 48/109 (44.04%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of Carg16439 vs. TrEMBL
Match: tr|A0A1S3TN76|A0A1S3TN76_VIGRR (uncharacterized protein LOC106757138 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757138 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 48/113 (42.48%), Postives = 63/113 (55.75%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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