CSPI02G05070 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGACAGAAAATCAGAATGTCACTTCTTACCTTTCTTTCAATTTGAACAAATTAAAATTAAATCATCCATTTTCCCCATCACTCTCCAATCCACAAACTTGGCGCCACCTGCCTCTGTTCATCCAATACCCACATCACTGGAAGTTTCACGTTTTTAGATTTCTTCAAGAAATTATTGCAACCCATTTTGTTTTTTCAATCTGTTGCTATCCCAATTCTTGTTTTCTTCAACCTTTTCTTCTTGTTTTACAGTTTGGAAATTTACACACAGACACACACACACATATATATATGTTGGAATCAAGACATGCTGAGAATAATATTTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGTGATGATGAAGACGACGAGACTCGTAATACTATGGCGAAAACCCAAATCAGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATGGGTAAAAAGGGGTTTGGAAAAGCAAAACAAGTGATGTTCTATCCATTTCGTAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGGGACTCTTCTTGTTCTTCTTCTTCTTCTTCTGTTACTTGTAGTAGAAGAACAAATTCTTTGGATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTGACTAAACTTTCGATTTCAGATTCTAAAAATGGGTCTCCGACTGACCCTAATCACCGGAAGTTCACTAATGAAATGTTGAAAGTTCTCATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTTGGTATTCTTTTTTTTTTCCTCTTGTTAATAAAACACAACTTAATAGTTTATACTTGTTTGGAGTTTGATGACGTTCTGGTTTTTGTTTGACAGATGTTCAAGTGGATACTAGACAGAAACATTAAATTCAATTGGGTTTTGGTTGTTGAGGTATGTAACCAATGTTATTCATGGATTGATAGATTTGATCAACTTATTTTTTTGTCCTTTATCCTTCTTCTCTTGTTTGCTAAGCAAATGAGAGAAGTCTTAGTATTCGGTGGGAGTCTGAGACTGTGGCCTTCTGTTTGGTTCATTTCATTGTAGCCTATTGATGTATGTTCATAGTTGGAATACATACTCCAAGGGAATATATTGACCAAATTAATTTTACCGAGAATCAATATTACATTCCACACGTTTGTCATTTGGAACCCAGAATGAGTTCTATGATTATTGAAGGAGTTTTACATTTTTTGTCTGTCTCCCGGATGAATTCGATAATTCTATTTTGTGTTCAATATCTTCAATGTTGTCAATGGATCGATATATTTAATTGACTTTTTTCTCCCATCTCTTCTTTGCTATGTTAATGAGAAGTTTAGTATTTGGTGAGACTGGAATTCTGCTTGATTTATTAGACAGTAGGCTATTGATGTATATTAAAAGTTGGAATAAATACTACACAAAGGAATATATTGACCAAATTAACTTTACCAAGCATCAATATTTACATTCCTCACTTTTGGCATTCAAAAATCCAGTGTGAGTTCTACAGTTATTGAAGGAGTTTTACATGCTTTTTTGCTGCGTGAATGACCAACGATTTTATGTGTACATCCTTAATGTTTTTGATTGAGTAGAGCTAATGTTGAATGATCACAGCTACAGTGTTACCCAGTCACAGAGCAGGTTGTTGAATTTTGAATGCGTGCATTTAATTTATGTTGTAATTGTAACACTCTTCACTTATCTACAAGGATTTATTTTATCCTGCACTTTAGTTTCTTATTCTACATGTATTCAAATCAAGACTTTTGTAACAAAAAAAATCATCTCTCTGTTCTTCATTGCTCTATCTTGGCTCATGTAAGTTAAGTTGGTGATCGGCTAGAAACTTCGGTAGTAGTACTGTTGTGGATTTCAAACCAACATACACATGTATTCTGCTGTATGCCTTCTGTTTGTTGCTGTATTTAATTCTTGACTTAACGTGTCTCAAGTTTCCGAGAAGCCTCATTGTCATTCATTGCTGTGTGACCGAATGTGTGCAGATTTAATTCAAGCGTCTAGCCTTAACCATCCCCTTCCATTGTTCATTCAACTTGTGACCAAAAAGTTCTAGTGGGGAGTGAAGTTGAGGATTTCATGAGGCTATTGCTAGTGTTTGTAACATTGGTTCAGAAAATATGCACGCTGACAATTAATATTTAAGAGAAGATGGAGATTCTTCCGGAGATGGTCTTTGTTCTTTTGTTTGATGATAAGCAATTTGGATTGGAGGCCCCTCCTTCATTTGATCCCTCTTCCGAAGCTATTGTTATGAAGCCATAACCTTCTTTGGATCTCTCTAAGCCAAGTTCGTTATACTGTTTTCATTCTCTCTTCACTTGGGAAGATCCCTTTCAATATGGTGTAAAAACCGATTACTTCTTATGAAAAATTAGGTTTGGATTTCTGCTTGC ATGTTGGAATCAAGACATGCTGAGAATAATATTTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGTGATGATGAAGACGACGAGACTCGTAATACTATGGCGAAAACCCAAATCAGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATGGGTAAAAAGGGGTTTGGAAAAGCAAAACAAGTGATGTTCTATCCATTTCGTAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGGGACTCTTCTTGTTCTTCTTCTTCTTCTTCTGTTACTTGTAGTAGAAGAACAAATTCTTTGGATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTGACTAAACTTTCGATTTCAGATTCTAAAAATGGGTCTCCGACTGACCCTAATCACCGGAAGTTCACTAATGAAATGTTGAAAGTTCTCATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTTGATGTTCAAGTGGATACTAGACAGAAACATTAA ATGTTGGAATCAAGACATGCTGAGAATAATATTTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGTGATGATGAAGACGACGAGACTCGTAATACTATGGCGAAAACCCAAATCAGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATGGGTAAAAAGGGGTTTGGAAAAGCAAAACAAGTGATGTTCTATCCATTTCGTAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGGGACTCTTCTTGTTCTTCTTCTTCTTCTTCTGTTACTTGTAGTAGAAGAACAAATTCTTTGGATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTGACTAAACTTTCGATTTCAGATTCTAAAAATGGGTCTCCGACTGACCCTAATCACCGGAAGTTCACTAATGAAATGTTGAAAGTTCTCATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTTGATGTTCAAGTGGATACTAGACAGAAACATTAA
BLAST of CSPI02G05070 vs. TrEMBL
Match: A0A0A0LH19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035380 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.2e-91 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI02G05070 vs. TrEMBL
Match: M5WD38_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012278mg PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18 Identity = 76/178 (42.70%), Postives = 98/178 (55.06%), Query Frame = 1
BLAST of CSPI02G05070 vs. TrEMBL
Match: F6I4J4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00080 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13 Identity = 67/153 (43.79%), Postives = 84/153 (54.90%), Query Frame = 1
BLAST of CSPI02G05070 vs. TrEMBL
Match: A0A067JHI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23150 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11 Identity = 65/169 (38.46%), Postives = 87/169 (51.48%), Query Frame = 1
BLAST of CSPI02G05070 vs. TrEMBL
Match: V4UD18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029557mg PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.2e-11 Identity = 50/127 (39.37%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of CSPI02G05070 vs. NCBI nr
Match: gi|778667196|ref|XP_004144798.2| (PREDICTED: uncharacterized protein LOC101216013 [Cucumis sativus]) HSP 1 Score: 342.4 bits (877), Expect = 4.5e-91 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI02G05070 vs. NCBI nr
Match: gi|659070028|ref|XP_008452984.1| (PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]) HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86 Identity = 169/179 (94.41%), Postives = 169/179 (94.41%), Query Frame = 1
BLAST of CSPI02G05070 vs. NCBI nr
Match: gi|595830095|ref|XP_007205999.1| (hypothetical protein PRUPE_ppa012278mg [Prunus persica]) HSP 1 Score: 100.5 bits (249), Expect = 3.0e-18 Identity = 76/178 (42.70%), Postives = 98/178 (55.06%), Query Frame = 1
BLAST of CSPI02G05070 vs. NCBI nr
Match: gi|645221915|ref|XP_008246344.1| (PREDICTED: uncharacterized protein LOC103344526 [Prunus mume]) HSP 1 Score: 94.7 bits (234), Expect = 1.7e-16 Identity = 69/167 (41.32%), Postives = 88/167 (52.69%), Query Frame = 1
BLAST of CSPI02G05070 vs. NCBI nr
Match: gi|694379637|ref|XP_009365998.1| (PREDICTED: loricrin isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 89.7 bits (221), Expect = 5.3e-15 Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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