Carg15483 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15483
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Vesicle transport protein
Location	Cucurbita_argyrosperma_scaffold_069 : 400172 .. 401887 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGTTCTTCTCTCTTTCTCCTTTCATTACTCTTAACTCTTCGTTATGCATTCGTATTCCTTTAATTCCGCTGTTTTCCTTGCATAACAACAATAATCGCCTGCAATTTGCTGCTTTCTCTTATGCTCATACTGATTTAATTGATGTAAATATCTTTCTCTTTGTTATGTTCCAGGTTTTTATTAGATTTGTTCTCGAAACCTTGTTATTTGTTGTTCTGGTTGATTGATTGATTGATGGAACTTCATCTGGATCTTGTATGACTTTTCTCAATTTTTGCTGCGCTAACCCTAGGATTTTTGTTGATTGAAGTTGCTTTGCTGATCTGATCGGCCTGTTTCTTCTTGATTTCGTTTTGAAATTATGCAGTGAAGGCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAGTAAGTTTACTATTTCTTGCCGATGGACTATCCTGTGAAGTGGATCGGTTTCTCCTTTCAAGTAATTAGCTATTGGTTTAGGCCACTTGACTATTACAGTATTATCGTTTTATTCTGTTTGTAGTTTGGTAATTAGAATGGTTGGAATGAGTGTTCTGTTGGTCATAGGTTTGAATATGGTGAATCCGGCGTTGGCAATGGCCATGCGATGGAGTTTTTGATCACTTAATCTAGTATTTGCTTCTCGTCTGTATTTGCTTTCTTGGAACCGAAAATGTGTTGAAATGGAATTTTTGGTCTTTAACTAAGTTTAGTGGCTGGACACCATTTATAGAAATTTGTATCCTATTAAGTCATAGATTGCTTTCACACATATTCTTAATGCTACGTATTTAGTTGATTTTTGCGTGTCTACTTTGGTAATATTCACGCATATAGGAGTGAAGCTGTGTGGTCTTTTCTAATTGTTTTGTTTCTTATATGGAATTGTTAATTTGTAATGGCATTAACGAGGAAATTTCCAAATGAGCAGAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATGTAAGTGTAAAATTTATATTTTTGTCGACCCAAGTAAAAAGATTTATAATGCTTTTTTCATTTCAATGTAAACTCTTAACACTTCCTCTTTTCTGATTTGCTGAATCAGATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTCAGTGCCAGAGATAGATACTCTTTTCCTCATACTCGTCCGTTATCGTGCATGCATTTTTTTTTCATGACAATATGCTATTCATTAATTGTGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGGTTTGTTGGAACCATGTGGCTACAATTTCAATTTGTCTGTATATGTCTTTCTAATATTGGGCTGTGCTGAATGTTGATAAATTATACTGTGCAGTGGCTTCTGGCCAACATTGGCAGTTTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

mRNA sequence

ATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTTTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

Coding sequence (CDS)

ATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTTTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

Protein sequence

MHLASGTSLNCSSLRVEFSHFCLHSQGGEFQLSVDMVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSVGSYFF

Homology

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BLAST of Carg15483 vs. NCBI nr
Match: XP_022932598.1 (vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022972315.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_022972317.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_023539038.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >XP_023539039.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 6.8e-64
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. NCBI nr
Match: XP_004152095.1 (PREDICTED: vesicle transport protein GOT1B [Cucumis sativus] >XP_011653059.1 PREDICTED: vesicle transport protein GOT1B [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_4G016390 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. NCBI nr
Match: XP_008453962.1 (PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_016901587.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGT+SFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. NCBI nr
Match: XP_011462621.1 (PREDICTED: vesicle transport protein GOT1B-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 120/129 (93.02%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLG+VFFFDKGLLAMGNILFFSGVTLTIG KSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGMVFFFDKGLLAMGNILFFSGVTLTIGFKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKG+ISFG+GFFFV+IGWPI+GM+LEAYGFVVLFSGFWPTLAVFLQKIP+LGW+
Sbjct: 61  FMKRQNFKGSISFGVGFFFVLIGWPIVGMLLEAYGFVVLFSGFWPTLAVFLQKIPILGWV 120

Query: 156 FQQPYVRSV 165
           FQQPYVRSV
Sbjct: 121 FQQPYVRSV 129

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BLAST of Carg15483 vs. NCBI nr
Match: XP_018812954.1 (PREDICTED: vesicle transport protein GOT1-like [Juglans regia] >XP_018812955.1 PREDICTED: vesicle transport protein GOT1-like [Juglans regia] >XP_018812956.1 PREDICTED: vesicle transport protein GOT1-like [Juglans regia])

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61
Identity = 120/128 (93.75%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIG+GLTGFGIFFSFLGI+FFFDKGLLAMGNILFFSGVTLTIGLKS+MQF
Sbjct: 1   MVSFEMNDRKKIGMGLTGFGIFFSFLGIIFFFDKGLLAMGNILFFSGVTLTIGLKSSMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN KGTISFG+GFFFV+IGWPI+GMILEAYGF+VLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNIKGTISFGVGFFFVVIGWPILGMILEAYGFIVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

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BLAST of Carg15483 vs. TAIR10
Match: AT3G49420.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 230.3 bits (586), Expect = 8.6e-61
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 156 FQQPYVRS 164
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

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BLAST of Carg15483 vs. TAIR10
Match: AT5G01430.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 230.3 bits (586), Expect = 8.6e-61
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 156 FQQPYVRS 164
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Carg15483 vs. TAIR10
Match: AT3G03180.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-54
Identity = 98/129 (75.97%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M S EMND KKIGLGLTGFG+FF+FLG++F FDKGL+AMGNILF +GVTLTIG+   +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           F KRQNFKGTISFGLGF  V+ GWPI G++LE+YGF+VLFSGFWPTLAVFLQ+IP+LGWL
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 156 FQQPYVRSV 165
            QQPY+RS+
Sbjct: 121 LQQPYIRSL 129

[Close]

BLAST of Carg15483 vs. TAIR10
Match: AT1G05785.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-32
Identity = 62/121 (51.24%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 39  FEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMK 98
           +E+ ++KK+GLGL GFG+ F+FLG++ +FD+GLLA+GN+ +  GV L +G +ST + F  
Sbjct: 3   YEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVFTN 62

Query: 99  RQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQ 158
             N +GTI F LG F + + WPIIG+ILE YG +VLF GFW T+  FL +IP +GW+ Q 
Sbjct: 63  VNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWIIQY 122

Query: 159 P 160
           P
Sbjct: 123 P 123

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BLAST of Carg15483 vs. Swiss-Prot
Match: sp|Q6NMM1|GOT1_ARATH (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-53
Identity = 98/129 (75.97%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           M S EMND KKIGLGLTGFG+FF+FLG++F FDKGL+AMGNILF +GVTLTIG+   +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           F KRQNFKGTISFGLGF  V+ GWPI G++LE+YGF+VLFSGFWPTLAVFLQ+IP+LGWL
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 156 FQQPYVRSV 165
            QQPY+RS+
Sbjct: 121 LQQPYIRSL 129

[Close]

BLAST of Carg15483 vs. Swiss-Prot
Match: sp|Q9CR60|GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-30
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 41  MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 100
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF +R 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRH 63

Query: 101 NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 160
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 161 VRS 164
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Carg15483 vs. Swiss-Prot
Match: sp|Q2YDE3|GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 41  MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 100
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 101 NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 160
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 161 VRS 164
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Carg15483 vs. Swiss-Prot
Match: sp|Q9Y3E0|GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 41  MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 100
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 101 NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 160
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 161 VRS 164
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Carg15483 vs. Swiss-Prot
Match: sp|Q2NKV8|GOT1A_BOVIN (Vesicle transport protein GOT1A OS=Bos taurus OX=9913 GN=GOLT1A PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-22
Identity = 59/117 (50.43%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 45  KKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKG 104
           +KIG+G TGFGIFF   G++ +FD  LLA GN+LF +G++L IGL+ T  FF +R  FKG
Sbjct: 8   QKIGVGTTGFGIFFILFGMLLYFDSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQRHKFKG 67

Query: 105 TISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFL---QKIPVLGWLFQQ 159
           T  F  G   V++ WP++GM LE YGF  LF GF+P    FL     IP L  LFQ+
Sbjct: 68  TSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALFQR 124

[Close]

BLAST of Carg15483 vs. TrEMBL
Match: tr|A0A0A0KU00|A0A0A0KU00_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.7e-63
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. TrEMBL
Match: tr|A0A1S3BYQ5|A0A1S3BYQ5_CUCME (vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-63
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGT+SFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. TrEMBL
Match: tr|A0A2I4E0N2|A0A2I4E0N2_9ROSI (vesicle transport protein GOT1-like OS=Juglans regia OX=51240 GN=LOC108985206 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 9.4e-62
Identity = 120/128 (93.75%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIG+GLTGFGIFFSFLGI+FFFDKGLLAMGNILFFSGVTLTIGLKS+MQF
Sbjct: 1   MVSFEMNDRKKIGMGLTGFGIFFSFLGIIFFFDKGLLAMGNILFFSGVTLTIGLKSSMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQN KGTISFG+GFFFV+IGWPI+GMILEAYGF+VLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNIKGTISFGVGFFFVVIGWPILGMILEAYGFIVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 156 FQQPYVRS 164
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Carg15483 vs. TrEMBL
Match: tr|A0A061FRI8|A0A061FRI8_THECC (Got1/Sft2-like vescicle transport protein family isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_036309 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61
Identity = 119/129 (92.25%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFGIFFSFLGI+FFFDKGLLAMGNILF SGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIIFFFDKGLLAMGNILFISGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFG+GFFFV+IGWPI GMILEAYGFVVLFSGFWPTLAVF+Q+IP+LGWL
Sbjct: 61  FMKRQNFKGTISFGVGFFFVVIGWPIFGMILEAYGFVVLFSGFWPTLAVFMQRIPILGWL 120

Query: 156 FQQPYVRSV 165
           FQQPY+RS+
Sbjct: 121 FQQPYIRSL 129

[Close]

BLAST of Carg15483 vs. TrEMBL
Match: tr|A0A2N9FH26|A0A2N9FH26_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14192 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.6e-61
Identity = 116/128 (90.62%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95
           MVSFEMNDRKKIGLGLTGFG+FFSFLGI+FFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIIFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155
           FMKRQNFKGTISFG+GFFFV+IGWPI+GMILEAYGF+VLFSGFWPT+AVFLQ+IP+LGWL
Sbjct: 61  FMKRQNFKGTISFGVGFFFVVIGWPILGMILEAYGFIVLFSGFWPTMAVFLQRIPILGWL 120

Query: 156 FQQPYVRS 164
            QQPY+R+
Sbjct: 121 IQQPYIRT 128

The following BLAST results are available for this feature:

BLAST of Carg15483 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932598.1	6.8e-64	100.00	vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle...	[more]
XP_004152095.1	2.6e-63	98.44	PREDICTED: vesicle transport protein GOT1B [Cucumis sativus] >XP_011653059.1 PRE...	[more]
XP_008453962.1	3.4e-63	97.66	PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 P...	[more]
XP_011462621.1	1.1e-61	93.02	PREDICTED: vesicle transport protein GOT1B-like [Fragaria vesca subsp. vesca]	[more]
XP_018812954.1	1.4e-61	93.75	PREDICTED: vesicle transport protein GOT1-like [Juglans regia] >XP_018812955.1 P...	[more]

BLAST of Carg15483 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49420.1	8.6e-61	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.1	8.6e-61	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT3G03180.1	1.2e-54	75.97	Got1/Sft2-like vescicle transport protein family	[more]
AT1G05785.1	1.3e-32	51.24	Got1/Sft2-like vescicle transport protein family	[more]

BLAST of Carg15483 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NMM1\|GOT1_ARATH	2.2e-53	75.97	Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1	[more]
sp\|Q9CR60\|GOT1B_MOUSE	2.0e-30	52.85	Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1	[more]
sp\|Q2YDE3\|GOT1B_BOVIN	3.4e-30	52.03	Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1	[more]
sp\|Q9Y3E0\|GOT1B_HUMAN	3.4e-30	52.03	Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1	[more]
sp\|Q2NKV8\|GOT1A_BOVIN	1.2e-22	50.43	Vesicle transport protein GOT1A OS=Bos taurus OX=9913 GN=GOLT1A PE=2 SV=1	[more]

BLAST of Carg15483 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU00\|A0A0A0KU00_CUCSA	1.7e-63	98.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1	[more]
tr\|A0A1S3BYQ5\|A0A1S3BYQ5_CUCME	2.2e-63	97.66	vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=...	[more]
tr\|A0A2I4E0N2\|A0A2I4E0N2_9ROSI	9.4e-62	93.75	vesicle transport protein GOT1-like OS=Juglans regia OX=51240 GN=LOC108985206 PE...	[more]
tr\|A0A061FRI8\|A0A061FRI8_THECC	1.2e-61	92.25	Got1/Sft2-like vescicle transport protein family isoform 1 OS=Theobroma cacao OX...	[more]
tr\|A0A2N9FH26\|A0A2N9FH26_FAGSY	3.6e-61	90.63	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14192 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport

Vocabulary: **INTERPRO**
Term	Definition
IPR007305	Vesicle_transpt_Got1/SFT2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15483-RA	Carg15483-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 56..150 e-value: 1.0E-13 score: 51.6
None	No IPR available	PANTHER	PTHR21493:SF97	GOT1/SFT2-LIKE VESCICLE TRANSPORT PROTEIN	coord: 39..160
None	No IPR available	PANTHER	PTHR21493	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	coord: 39..160

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15483	Cla010830	Watermelon (97103) v1	carwmB0690
Carg15483	Csa4G016390	Cucumber (Chinese Long) v2	carcuB0716
Carg15483	MELO3C017698	Melon (DHL92) v3.5.1	carmeB0694
Carg15483	ClCG07G015830	Watermelon (Charleston Gray)	carwcgB0670
Carg15483	CSPI04G03540	Wild cucumber (PI 183967)	carcpiB0730
Carg15483	Cucsa.094630	Cucumber (Gy14) v1	carcgyB0775
Carg15483	CmaCh06G016380	Cucurbita maxima (Rimu)	carcmaB0974
Carg15483	CmaCh14G014870	Cucurbita maxima (Rimu)	carcmaB0972
Carg15483	CmoCh06G016370	Cucurbita moschata (Rifu)	carcmoB0947
Carg15483	CmoCh14G015230	Cucurbita moschata (Rifu)	carcmoB0946
Carg15483	Lsi07G000650	Bottle gourd (USVL1VR-Ls)	carlsiB634
Carg15483	Cp4.1LG03g12640	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15483	Cp4.1LG08g05950	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15483	CsGy4G003440	Cucumber (Gy14) v2	carcgybB0693
Carg15483	MELO3C017698.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15483	CsaV3_4G003550	Cucumber (Chinese Long) v3	carcucB0733
Carg15483	Cla97C07G142840	Watermelon (97103) v2	carwmbB0722
Carg15483	Bhi01G002074	Wax gourd	carwgoB0816

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15483	Carg22434	Silver-seed gourd	carcarB231

The following block(s) are covering this gene:

None