Carg15475 (gene) Silver-seed gourd

Overview
NameCarg15475
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description40S ribosomal protein S8
LocationCucurbita_argyrosperma_scaffold_069 : 352382 .. 354112 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCTCGTCCTTCAACTGCTCATCTCACTCGATTCTTGCTTTGTCAGGTTAGTAATCACTAAATAATTTTTGGTTTCTGATTTTGATTGATACGATTTGAGTTCTATACTTTTTAAGCTTTGAAATCGTCGAAATCGATTGCAATGGAGTGTTGCGTTTTAATTGACAGGATTTTATCGTGACATTGGCGCATTGTAATTCGAGCATCTCTGTTTAGTCTTTTCCTAGCCTGCAAAACAGTGACTAGTTATGATATAGAACTGATTTAGAAAACCTGAATTACAGGTGAATTCTATAAGAAAATTGATGCGTTTAAGTCTAAAGAAGATCGAAATTTCTGATGAAATTTGGCCTTAGGTTCAATTGGGAAATCCACAGATAGTTTTAGTACTTCATCACACATTTGCTTTTGAAGGTTAAGGTTAAGGATTGGATCACAGTCTGCTAATTCTTTGACTTGTTTTCAAACAGGAACTTTAGAACTCCTCTTCCCAGAAGAGCTCTCGTCTCACCAAGATGGGTATGTTAGATACAGATTTTCATTTTGTCTCATTTGTGACTTTGTCTTCATTTTCGTTAATCTTGGAGAACTTTGTGTATAGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGAAAGAAGAAGGCTCGGAGGAAGAAGAGAAAGTAACCATCTCTGCTCATATTGCCCAAATTAATTGCTAATAGGTATATGGAATTGTGGAGGATTATTGGGAGGGAGTCCCACGTTGGCTAATTTAGGAAATGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTAGGAGGCTTTTTAGAGAAACTAAAAGCAAAACCATGAGAGCTTATGTTCATCCGCGTCGACAATATCACTTTTCTCTCAAATCAAGATGCAACTTTAGTTTTCTGTGTGTTTTTAAAGCCATACTGATATTGTTTCTTTCGGCACCTTTGTTTGTAAAGGTATGAGGTCGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCGATTAGAAGGATCAGAGTTCGTGGTGGTAATGTGAAGTGGCGTGGATTTAGGCTCGATACTGGAAAACTACTCTTGGGGTAGTGAGGCTGTGACGCCGCCCGTATTCTCGATGTGGTGTACAACGCATCTAACAGCGAGCTTGTTCGTACTCAAACCTTGGTGAAATTGTTCAGGTTGATGCAGCACCATTCAAACAGTGGTACCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCAGCTGCTAAGAAGGACAAGGTAGAACAAACTTGGGTAGTTCGAGTGATTTGAGCACCTGTTTTTTATGGGAATGATATACATGATCCTTAAACACAACTTGTTTTGTATGATCAGTAGGAAGGTGATGCTCCGAGCAAGGAGGCGACGAAGAGCAACCATGTCAGCAGGATCGTAAGCTTGATCCTCATATTGAAGAACAATTCAGCGGTGGTCGTTTGATGGCCTGTATCTCATCAAGACCGGGTCAATGCGATCGGCTCGATGGGTAAGCAGTTGAAATGCCTTGTGATCTAGCTTGTCTTTGATGTATTCTTGTCGCAACTTGTTTGAGCGCGAACATCGAAGCGTTTTTGGTGAGTCTTGCTGAGTTTTTAGCCTATTTGGAGGGCAAAGATTTCGAGTTCTACATGAAGAACCTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCT

mRNA sequence

TTTTTCTCGTCCTTCAACTGCTCATCTCACTCGATTCTTGCTTTGTCAGGAACTTTAGAACTCCTCTTCCCAGAAGAGCTCTCGTCTCACCAAGATGGGTATGAGGTCGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCGATTAGAAGGATCAGAGTTCGTGGTGGTAATGTGAAGTGGCGTGGATTTAGGCTCGATACTGGAAAACTACTCTTGGGTGAGGCTGTGACGCCGCCCGTATTCTCGATGTGGTGTACAACGCATCTAACAGCGAGCTTGTTCGTTGATGCAGCACCATTCAAACAGTGGTACCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCAGCTGCTAAGAAGGACAAGGTAGAACAAACTTGGGTAGTTCGACAAGGAGGCGACGAAGAGCAACCATGTCAGCAGGATCGTAAGCTTGATCCTCATATTGAAGAACAATTCAGCGGTGGTCGTTTGATGGCCTGTATCTCATCAAGACCGGGTCAATGCGATCGGCTCGATGGCGCGAACATCGAAGCGTTTTTGGTGAGTCTTGCTGAGTTTTTAGCCTATTTGGAGGGCAAAGATTTCGAGTTCTACATGAAGAACCTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCT

Coding sequence (CDS)

TTTTTCTCGTCCTTCAACTGCTCATCTCACTCGATTCTTGCTTTGTCAGGAACTTTAGAACTCCTCTTCCCAGAAGAGCTCTCGTCTCACCAAGATGGGTATGAGGTCGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCGATTAGAAGGATCAGAGTTCGTGGTGGTAATGTGAAGTGGCGTGGATTTAGGCTCGATACTGGAAAACTACTCTTGGGTGAGGCTGTGACGCCGCCCGTATTCTCGATGTGGTGTACAACGCATCTAACAGCGAGCTTGTTCGTTGATGCAGCACCATTCAAACAGTGGTACCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCAGCTGCTAAGAAGGACAAGGTAGAACAAACTTGGGTAGTTCGACAAGGAGGCGACGAAGAGCAACCATGTCAGCAGGATCGTAAGCTTGATCCTCATATTGAAGAACAATTCAGCGGTGGTCGTTTGATGGCCTGTATCTCATCAAGACCGGGTCAATGCGATCGGCTCGATGGCGCGAACATCGAAGCGTTTTTGGTGAGTCTTGCTGAGTTTTTAGCCTATTTGGAGGGCAAAGATTTCGAGTTCTACATGAAGAACCTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCT

Protein sequence

FFSSFNCSSHSILALSGTLELLFPEELSSHQDGYEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLGEAVTPPVFSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQGGDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAEFLAYLEGKDFEFYMKNLQRKKGKGAGAA
Homology
[Close]
BLAST of Carg15475 vs. NCBI nr
Match: XP_004148331.1 (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus] >KGN61144.1 hypothetical protein Csa_2G059750 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 4.6e-52
Identity = 126/207 (60.87%), Postives = 137/207 (66.18%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSSDKSIRRIRVRGGNVKWR FRLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRLLDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQ--TWVVR 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKTSA+ KK++     T  V+
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASVKKEEEGDAGTEEVK 146

Query: 154 QGGDEEQPC---QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAEF 213
           +    ++     QQDRKLDPHIEEQFS GRLMACISSRPGQC R DG             
Sbjct: 147 KSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADG------------- 206

Query: 214 LAYLEGKDFEFYMKNLQRKKGKGAGAA 222
              LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 -YILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Carg15475 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 126/207 (60.87%), Postives = 140/207 (67.63%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVT------PPVFS- 93
           YE+GRQPANTK+SSDKSIRRIRVRGGNVKWR FRLDTG    G EAVT        V++ 
Sbjct: 27  YELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKSRILDVVYNA 86

Query: 94  ------MWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKV--EQTWVVR 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKT A+AKK++     T  V+
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTVASAKKEEEGDAPTEEVK 146

Query: 154 QGGDEEQPC---QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAEF 213
           +    ++     QQDRKLDPHIEEQFS GRLMACISSRPGQC R DG             
Sbjct: 147 KSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADG------------- 206

Query: 214 LAYLEGKDFEFYMKNLQRKKGKGAGAA 222
              LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 -YILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Carg15475 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 9.6e-50
Identity = 124/210 (59.05%), Postives = 137/210 (65.24%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSSDKSIRRIRVRGGNVKWR FRLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTS--------AAAKKDKVE 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKTS          A  ++V+
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSXXXXXXXXGDAGTEEVK 146

Query: 154 QTWVVRQGGDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSL 213
           ++  V++  ++    QQDRKLDPHIEEQFS GRLMACISSRPGQC R DG          
Sbjct: 147 KSNHVQRKIEKR---QQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADG---------- 206

Query: 214 AEFLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
                 LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 ----YILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Carg15475 vs. NCBI nr
Match: OWM81341.1 (hypothetical protein CDL15_Pgr007379 [Punica granatum])

HSP 1 Score: 201.8 bits (512), Expect = 2.4e-48
Identity = 119/208 (57.21%), Postives = 133/208 (63.94%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 20  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 79

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVE---QTWVV 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKK  AAAKK+  E   QT  V
Sbjct: 80  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAQAAAKKEGEEGEAQTEEV 139

Query: 154 RQGGDEEQPC---QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAE 213
           ++    ++     Q+ R+LDPHIEEQF  GRL ACISSRPGQC R DG            
Sbjct: 140 KKSNHVQRKLAKRQEKRQLDPHIEEQFGSGRLFACISSRPGQCGRADG------------ 199

Query: 214 FLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
               LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 200 --YILEGKELEFYMKKLQRKKGKGAGAA 213

[Close]
BLAST of Carg15475 vs. NCBI nr
Match: XP_021633425.1 (40S ribosomal protein S8-like [Manihot esculenta] >OAY32872.1 hypothetical protein MANES_13G052100 [Manihot esculenta])

HSP 1 Score: 201.1 bits (510), Expect = 4.0e-48
Identity = 118/208 (56.73%), Postives = 132/208 (63.46%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDK------VEQT 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKT A  +  +      VE+T
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTVAKKETSEEGEGAAVEET 146

Query: 154 WVVRQGGDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAE 213
                   + +  Q+DRKLDPHIEEQF GGRL+ACISSRPGQC R DG            
Sbjct: 147 KKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADG------------ 206

Query: 214 FLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
               LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 --YILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Carg15475 vs. TAIR10
Match: AT5G59240.1 (Ribosomal protein S8e family protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46
Identity = 108/202 (53.47%), Postives = 125/202 (61.88%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                    T   +A + VDAAPFKQ YLQHYGVDIGRKKK  A   ++  +   V R  
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRKKKGEAVTTEEVKKSNHVQR-- 146

Query: 154 GDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAEFLAYLE 213
             + +  Q+ R LD H+EEQFS GRL+ACI+SRPGQC R DG                LE
Sbjct: 147 --KLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADG--------------YILE 206

Query: 214 GKDFEFYMKNLQRKKGKGAGAA 222
           GK+ EFYMK LQ+KKGK AGAA
Sbjct: 207 GKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Carg15475 vs. TAIR10
Match: AT5G20290.1 (Ribosomal protein S8e family protein)

HSP 1 Score: 157.9 bits (398), Expect = 7.1e-39
Identity = 93/209 (44.50%), Postives = 110/209 (52.63%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLGEAVTPPVFSMWCTTH-- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G   T     +    +  
Sbjct: 27  YEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNA 86

Query: 94  ------------LTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                        +A + VDAAPFKQWYL HYGV++GR                      
Sbjct: 87  SNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRXXXXXXXXXXXXXXXXXXXXXX 146

Query: 154 GDEEQPC----------QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLV 213
                            Q+ R LD HIE+QF+ GRL+ACISSRPGQC R DG        
Sbjct: 147 XXXXXXXXXLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADG-------- 206

Query: 214 SLAEFLAYLEGKDFEFYMKNLQRKKGKGA 219
                   LEGK+ EFYMK +Q+KKGKGA
Sbjct: 207 ------YILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Carg15475 vs. Swiss-Prot
Match: sp|O81361|RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.7e-46
Identity = 110/208 (52.88%), Postives = 123/208 (59.13%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                    T   +A + VDAAPFKQWYLQHYGV+IGRKKKT+A                
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAXXXXXXXXXXXXXXXA 146

Query: 154 GDEE------QPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAE 213
                     +  QQ R LD HIEEQF GG+L+ACISSRPGQC + DG            
Sbjct: 147 KKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADG------------ 206

Query: 214 FLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
               LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 --DILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Carg15475 vs. Swiss-Prot
Match: sp|Q08069|RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 9.8e-46
Identity = 112/210 (53.33%), Postives = 126/210 (60.00%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RR+RVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                    T   +A + VDAAPFKQWYL HYGVDIGRKKKT  AAKKD  E   V    
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKT-PAAKKDNAEGQEVEAAA 146

Query: 154 GDEE---------QPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVS 213
            + +         +  ++ R LDPHIEEQF  GRL+ACISSRPGQC R DG         
Sbjct: 147 EETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADG--------- 206

Query: 214 LAEFLAYLEGKDFEFYMKNLQRKKGKGAGA 221
                  LEGK+ EFYMK LQRKKGK A A
Sbjct: 207 -----YILEGKELEFYMKKLQRKKGKSAVA 221

[Close]
BLAST of Carg15475 vs. Swiss-Prot
Match: sp|P49199|RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-45
Identity = 109/208 (52.40%), Postives = 123/208 (59.13%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RR+RVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                    T   +A + VDAAPFKQWYL HYGVDIGRKKK  AA K  + +      + 
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAEGQDAEATTEE 146

Query: 154 GDEE-------QPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLA 213
             +        +  QQ R LD HIEEQF  GRL+ACISSRPGQC R DG           
Sbjct: 147 AKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADG----------- 206

Query: 214 EFLAYLEGKDFEFYMKNLQRKKGKGAGA 221
                LEGK+ EFYMK LQRKKGKGA A
Sbjct: 207 ---YILEGKELEFYMKKLQRKKGKGASA 220

[Close]
BLAST of Carg15475 vs. Swiss-Prot
Match: sp|Q9FIF3|RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.9e-45
Identity = 108/202 (53.47%), Postives = 125/202 (61.88%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                    T   +A + VDAAPFKQ YLQHYGVDIGRKKK  A   ++  +   V R  
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGRKKKGEAVTTEEVKKSNHVQR-- 146

Query: 154 GDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAEFLAYLE 213
             + +  Q+ R LD H+EEQFS GRL+ACI+SRPGQC R DG                LE
Sbjct: 147 --KLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADG--------------YILE 206

Query: 214 GKDFEFYMKNLQRKKGKGAGAA 222
           GK+ EFYMK LQ+KKGK AGAA
Sbjct: 207 GKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Carg15475 vs. Swiss-Prot
Match: sp|Q93VG5|RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 93/209 (44.50%), Postives = 110/209 (52.63%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLGEAVTPPVFSMWCTTH-- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G   T     +    +  
Sbjct: 27  YEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNA 86

Query: 94  ------------LTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                        +A + VDAAPFKQWYL HYGV++GR                      
Sbjct: 87  SNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRXXXXXXXXXXXXXXXXXXXXXX 146

Query: 154 GDEEQPC----------QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLV 213
                            Q+ R LD HIE+QF+ GRL+ACISSRPGQC R DG        
Sbjct: 147 XXXXXXXXXLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADG-------- 206

Query: 214 SLAEFLAYLEGKDFEFYMKNLQRKKGKGA 219
                   LEGK+ EFYMK +Q+KKGKGA
Sbjct: 207 ------YILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Carg15475 vs. TrEMBL
Match: tr|A0A0A0LJA0|A0A0A0LJA0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 126/207 (60.87%), Postives = 137/207 (66.18%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSSDKSIRRIRVRGGNVKWR FRLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRLLDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQ--TWVVR 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKTSA+ KK++     T  V+
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASVKKEEEGDAGTEEVK 146

Query: 154 QGGDEEQPC---QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAEF 213
           +    ++     QQDRKLDPHIEEQFS GRLMACISSRPGQC R DG             
Sbjct: 147 KSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADG------------- 206

Query: 214 LAYLEGKDFEFYMKNLQRKKGKGAGAA 222
              LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 -YILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Carg15475 vs. TrEMBL
Match: tr|A0A1S3BRZ4|A0A1S3BRZ4_CUCME (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.4e-50
Identity = 124/210 (59.05%), Postives = 137/210 (65.24%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSSDKSIRRIRVRGGNVKWR FRLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTS--------AAAKKDKVE 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKTS          A  ++V+
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSXXXXXXXXGDAGTEEVK 146

Query: 154 QTWVVRQGGDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSL 213
           ++  V++  ++    QQDRKLDPHIEEQFS GRLMACISSRPGQC R DG          
Sbjct: 147 KSNHVQRKIEKR---QQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADG---------- 206

Query: 214 AEFLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
                 LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 ----YILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Carg15475 vs. TrEMBL
Match: tr|A0A218X9Z9|A0A218X9Z9_PUNGR (40S ribosomal protein S8 OS=Punica granatum OX=22663 GN=CDL15_Pgr007379 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 119/208 (57.21%), Postives = 133/208 (63.94%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 20  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 79

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVE---QTWVV 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKK  AAAKK+  E   QT  V
Sbjct: 80  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAQAAAKKEGEEGEAQTEEV 139

Query: 154 RQGGDEEQPC---QQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAE 213
           ++    ++     Q+ R+LDPHIEEQF  GRL ACISSRPGQC R DG            
Sbjct: 140 KKSNHVQRKLAKRQEKRQLDPHIEEQFGSGRLFACISSRPGQCGRADG------------ 199

Query: 214 FLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
               LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 200 --YILEGKELEFYMKKLQRKKGKGAGAA 213

[Close]
BLAST of Carg15475 vs. TrEMBL
Match: tr|A0A2C9UP22|A0A2C9UP22_MANES (40S ribosomal protein S8 OS=Manihot esculenta OX=3983 GN=MANES_13G052100 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 118/208 (56.73%), Postives = 132/208 (63.46%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDK------VEQT 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKT A  +  +      VE+T
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTVAKKETSEEGEGAAVEET 146

Query: 154 WVVRQGGDEEQPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFLVSLAE 213
                   + +  Q+DRKLDPHIEEQF GGRL+ACISSRPGQC R DG            
Sbjct: 147 KKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADG------------ 206

Query: 214 FLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
               LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 --YILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Carg15475 vs. TrEMBL
Match: tr|A0A1R3KEG0|A0A1R3KEG0_COCAP (40S ribosomal protein S8 OS=Corchorus capsularis OX=210143 GN=CCACVL1_01887 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48
Identity = 122/213 (57.28%), Postives = 133/213 (62.44%), Query Frame = 0 

Query: 34  YEVGRQPANTKLSSDKSIRRIRVRGGNVKWRGFRLDTGKLLLG-EAVTPPV--------- 93
           YE+GRQPANTKLSS+K++RRIRVRGGNVKWR  RLDTG    G EAVT            
Sbjct: 27  YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNA 86

Query: 94  ----FSMWCTTHLTASLFVDAAPFKQWYLQHYGVDIGRKKKTSAAAKKDKVEQTWVVRQG 153
                    T   +A + VDAAPFKQWYLQHYGVDIGRKKKT  AAKKD  E    V + 
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKT--AAKKDATE----VGEA 146

Query: 154 GDEE-----------QPCQQDRKLDPHIEEQFSGGRLMACISSRPGQCDRLDGANIEAFL 213
             EE           +  Q+DRKLDPHIEEQF  GRL+ACISSRPGQC R DG       
Sbjct: 147 AAEETKKSNHVLRKIEKRQKDRKLDPHIEEQFGSGRLLACISSRPGQCGRADG------- 206

Query: 214 VSLAEFLAYLEGKDFEFYMKNLQRKKGKGAGAA 222
                    LEGK+ EFYMK LQRKKGKGAGAA
Sbjct: 207 -------YILEGKELEFYMKKLQRKKGKGAGAA 219

The following BLAST results are available for this feature:
BLAST of Carg15475 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148331.14.6e-5260.87PREDICTED: 40S ribosomal protein S8 [Cucumis sativus] >KGN61144.1 hypothetical p... [more]
XP_022929761.11.8e-5160.8740S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal... [more]
XP_008451649.19.6e-5059.05PREDICTED: 40S ribosomal protein S8-like [Cucumis melo][more]
OWM81341.12.4e-4857.21hypothetical protein CDL15_Pgr007379 [Punica granatum][more]
XP_021633425.14.0e-4856.7340S ribosomal protein S8-like [Manihot esculenta] >OAY32872.1 hypothetical prote... [more]
BLAST of Carg15475 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59240.12.7e-4653.47Ribosomal protein S8e family protein[more]
AT5G20290.17.1e-3944.50Ribosomal protein S8e family protein[more]
BLAST of Carg15475 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O81361|RS8_PRUAR5.7e-4652.8840S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1[more]
sp|Q08069|RS8_MAIZE9.8e-4653.3340S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2[more]
sp|P49199|RS8_ORYSJ1.3e-4552.4040S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S... [more]
sp|Q9FIF3|RS82_ARATH4.9e-4553.4740S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1[more]
sp|Q93VG5|RS81_ARATH1.3e-3744.5040S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1[more]
BLAST of Carg15475 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJA0|A0A0A0LJA0_CUCSA3.1e-5260.8740S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1[more]
tr|A0A1S3BRZ4|A0A1S3BRZ4_CUCME6.4e-5059.0540S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1[more]
tr|A0A218X9Z9|A0A218X9Z9_PUNGR1.6e-4857.2140S ribosomal protein S8 OS=Punica granatum OX=22663 GN=CDL15_Pgr007379 PE=3 SV=... [more]
tr|A0A2C9UP22|A0A2C9UP22_MANES2.7e-4856.7340S ribosomal protein S8 OS=Manihot esculenta OX=3983 GN=MANES_13G052100 PE=3 SV... [more]
tr|A0A1R3KEG0|A0A1R3KEG0_COCAP3.5e-4857.2840S ribosomal protein S8 OS=Corchorus capsularis OX=210143 GN=CCACVL1_01887 PE=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR001047Ribosomal_S8e
IPR022309Ribosomal_S8e/biogenesis_NSA2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15475-RACarg15475-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 33..77
e-value: 2.1E-7
score: 31.1
NoneNo IPR availableGENE3DG3DSA:2.40.10.450coord: 39..83
e-value: 1.6E-6
score: 30.3
NoneNo IPR availableGENE3DG3DSA:1.10.168.20coord: 101..162
e-value: 2.8E-18
score: 67.9
NoneNo IPR availablePANTHERPTHR10394:SF640S RIBOSOMAL PROTEIN S8-1coord: 33..78
coord: 94..217
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 33..78
coord: 94..217