Carg15050 (gene) Silver-seed gourd

Overview
NameCarg15050
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1
LocationCucurbita_argyrosperma_scaffold_078 : 284072 .. 286814 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGTTGTTGATTTCTTTAAGAAATATTCCTTACAAATTAAGCAATAGAAATGGGGATTCAAACCGAAGGCTTGTTTCAACTTCACTCTCAATCCCGAGTGAAAACTGGAATAGGGCTAACATTTTAACTAAAACTGGAATAGGGCTAAATAAGTGATAACTTAGTAGAGGACATCTTTCTTGAAATTTTGAGGAGATGGGTTATTTATCCAAAAAATCCTACGCTTCGAAAAGAAAAACTCGTCGTCTCGTCTGTAAATATCATCCGAAGGTGAAGATAGGACAGCGATGACTACTCCAATCCCGACACTCTCCTTCGCTTCACCTGTAATCACTCTCTCTCTCTCTTTGGCTCTTCGGCTCTTCGGCAAATTAATGGCGGAATCTCGAATATGAATATTCTGTTTTATGCTTTTGTTGATCTTTCTATCTTTAGCTTCTCTTTCAAATACATCAAATTTTGCTTATGTTGCCCATTTTTTCTAGTTGTTTCAGAGGATACAGACGAGGGCGGGAATTTCTCATGGATTTAACTTTCCTCCGCGGTTACAGGTTAAGATTCGAGAGATTCTCTCAACATCAAAGTTAAACATGCTCTCTTCGGCCCTTATTGTTCATGTCTTGTTGTTTTAAGTTTTCAGGTGGCCGCCAGAAAGCAAAGAGATGGTGAGGGTGTCGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGGAGAACGTGCTTGTTCTTTCTCTAAATTTCTCCCTTGCACCTATGTCTTTTATCTCATTCGTTTTCCGTTTCGTGTCACTCTCCTTATCTGTGATTTTATTCCTTTGCGTTTACATGAGTTAAGTTCTTCAAATTTAGATGTTTAGGGTAGTTCTACGACGAAGATTTTGGGTAGTAGATAGTAGGTTCTACGAGACAAGCACCTGTAGAAAACTGAAACACTGCGAGTCTACCTTACAATAAAGAAGAAGAAATGGAAGCATTGCAATGTGCTAAATTGATCTATATTTTCTTGTGTAACAGTAGCCAACTTTTCTAAAGGCCCTCTAGGTTGTTCTCTTTTCATGTTTTTGAATCTATGGTTTCTTCTACTAAAACAACAATTTTTTTTTTTTTTTTTTTTTTGTAGCATTCAGTTTCATGTACCACATTTTTGTATCAACTTTTTTTTGTTCTACTTCAGTTAGAACATTATTCATCTATTGGATTCCACACTCTCTTTTCTATTTAGCTCTTTGTTTAACAAACATTGAGAATTTAATCATTGTTTCTGCAATATTTTCTCATCTTTTCTTTTTTAACTTTTTTTTCTCTAACACTTTGCTATCCGGTATAGTTTGTCATCTTCAGTTTACAACACTGATGTGTAAAGTTAGGGAAAAACTAATTTGTATTTGGTGCTTTTTACGACGATTATTGGAGATGTTATGCTTGTTATAGCTTCTGTTTTGAGTAATGAAACTCAATGCATGGTTTTTTTATCGCTGACTATTTAAATGTGGATGTCAGAATGATTCCGTTTTCCAATCCATCAAACTTGATAATTGATCTCGATTAGGACACAAGCACCATGGGTAGTTAAGTTGAGAACATTCGTAGAGAATGTGGGATTATAGGTTCATGGTGGTATAGGATATACAACTGCTACAAGTTTCTTAGTAACCATACATGTAGATCAGGCAGTTGTCTAAATGAAATTAGGTGAGATGTGTAAATTGGCCTAGATACAATGATGTAGGATTGAAGCTTGTAATCGTTTATGATGTAGAACATCTTCGCTGAGATGAGAATTAGTCATAATCACTCATCATCATTTTGGCAGACTTCTATATGTTGTTCTCATTGACATTGAAACATTGAATCTGATTCATTGTGCAGACGAAGAAGGATGACATGTCGATCTTCAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTGCTATCAGAGGACAACCGCTTCGATTTCGTGAACGAGGTTGCAGCGGAGGCTAAGGAATACGTGGAGAACAATCGTGATGAATATGGGGGTTCCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGACCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGACCTCATTATCTCAAACAAGAATTTACTTGAACAACCTTATTACAATATCCATTTTCCTATACAAACTTGGTCTATGTAGTAATTTGGTTTACCTACCCTGTTGTTGTATGTTCGCTACTGCATATTTCTCTAGTGATTAAGAATCCTGCTTGCATTTTACTTACAATTGAGAAGGAATGGCACTACATAAGCAGAGAATATAATGCAAATATTTGCTGCTTTCCTCTGACTAACTTCTCTTTACTTCTCTGTGGTTGAAACAAATTGTAATATATGGGCTTTTGAGAAATGTTATAATTATAATTATTTCAAAATTAAATGATTTCTTCTAAGCATGTGGGCTTCGGATCTCATCTGATCCAATTTCTGGATGGATTTTAGGCCTTCAATGATTTGAATGGGCCGCATATGGGCTTCGGATCTCATCTGGTCCAATTCCATCCGAAGATGTGTCTGTCTGTCGTGACAAGTGAACAAGAACGCGAGTATCTTGGTTTCTCATACTCTCAAGAAACACCAATTCATTTGTATGTTTCTCTTTTATTACTATAAATATAATCTTGATT

mRNA sequence

CATTGTTGTTGATTTCTTTAAGAAATATTCCTTACAAATTAAGCAATAGAAATGGGGATTCAAACCGAAGGCTTGTTTCAACTTCACTCTCAATCCCGAGTGAAAACTGGAATAGGGCTAACATTTTAACTAAAACTGGAATAGGGCTAAATAAGTGATAACTTAGTAGAGGACATCTTTCTTGAAATTTTGAGGAGATGGGTTATTTATCCAAAAAATCCTACGCTTCGAAAAGAAAAACTCGTCGTCTCGTCTGTAAATATCATCCGAAGGTGAAGATAGGACAGCGATGACTACTCCAATCCCGACACTCTCCTTCGCTTCACCTTTGTTTCAGAGGATACAGACGAGGGCGGGAATTTCTCATGGATTTAACTTTCCTCCGCGGTTACAGGTGGCCGCCAGAAAGCAAAGAGATGGTGAGGGTGTCGGTCGGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGACATGTCGATCTTCAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTGCTATCAGAGGACAACCGCTTCGATTTCGTGAACGAGGTTGCAGCGGAGGCTAAGGAATACGTGGAGAACAATCGTGATGAATATGGGGGTTCCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGACCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGACCTCATTATCTCAAACAAGAATTTACTTGAACAACCTTATTACAATATCCATTTTCCTATACAAACTTGGTCTATGTAGTAATTTGGTTTACCTACCCTGTTGTTGTATGTTCGCTACTGCATATTTCTCTAGTGATTAAGAATCCTGCTTGCATTTTACTTACAATTGAGAAGGAATGGCACTACATAAGCAGAGAATATAATGCAAATATTTGCTGCTTTCCTCTGACTAACTTCTCTTTACTTCTCTGTGGTTGAAACAAATTGTAATATATGGGCTTTTGAGAAATGTTATAATTATAATTATTTCAAAATTAAATGATTTCTTCTAAGCATGTGGGCTTCGGATCTCATCTGATCCAATTTCTGGATGGATTTTAGGCCTTCAATGATTTGAATGGGCCGCATATGGGCTTCGGATCTCATCTGGTCCAATTCCATCCGAAGATGTGTCTGTCTGTCGTGACAAGTGAACAAGAACGCGAGTATCTTGGTTTCTCATACTCTCAAGAAACACCAATTCATTTGTATGTTTCTCTTTTATTACTATAAATATAATCTTGATT

Coding sequence (CDS)

ATGACTACTCCAATCCCGACACTCTCCTTCGCTTCACCTTTGTTTCAGAGGATACAGACGAGGGCGGGAATTTCTCATGGATTTAACTTTCCTCCGCGGTTACAGGTGGCCGCCAGAAAGCAAAGAGATGGTGAGGGTGTCGGTCGGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGACATGTCGATCTTCAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATCGAAAGACTTCTGCTATCAGAGGACAACCGCTTCGATTTCGTGAACGAGGTTGCAGCGGAGGCTAAGGAATACGTGGAGAACAATCGTGATGAATATGGGGGTTCCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTCTATCGACCGGATGCATATGCAGAAGAGGACCCATTTAAACCCGGACCTCATTATCTCAAACAAGAATTTACTTGA

Protein sequence

MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Homology
[Close]
BLAST of Carg15050 vs. NCBI nr
Match: XP_022984516.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 334.7 bits (857), Expect = 1.8e-88
Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60
           MT+PIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK
Sbjct: 1   MTSPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120
           D+MSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN
Sbjct: 61  DEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of Carg15050 vs. NCBI nr
Match: XP_022923077.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-88
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0 

Query: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60
           MTTPIPTLSFASPLFQRIQTRAG+SHGFNFP RLQVAARKQRDGEGVGRRVWRRRKLTKK
Sbjct: 1   MTTPIPTLSFASPLFQRIQTRAGLSHGFNFPSRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120
           DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN
Sbjct: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of Carg15050 vs. NCBI nr
Match: XP_023553427.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-88
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60
           MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQ+AARKQRDGEGVGRRVWRRRKLTKK
Sbjct: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQMAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120
           D+MSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVENN
Sbjct: 61  DEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKDYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of Carg15050 vs. NCBI nr
Match: XP_022984517.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 323.6 bits (828), Expect = 4.1e-85
Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0 

Query: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60
           MT+PIPTLSFASP   RIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK
Sbjct: 1   MTSPIPTLSFASP---RIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120
           D+MSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN
Sbjct: 61  DEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Carg15050 vs. NCBI nr
Match: XP_022923078.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 322.8 bits (826), Expect = 7.0e-85
Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MTTPIPTLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKK 60
           MTTPIPTLSFASP   RIQTRAG+SHGFNFP RLQVAARKQRDGEGVGRRVWRRRKLTKK
Sbjct: 1   MTTPIPTLSFASP---RIQTRAGLSHGFNFPSRLQVAARKQRDGEGVGRRVWRRRKLTKK 60

Query: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120
           DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN
Sbjct: 61  DDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENN 120

Query: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT
Sbjct: 121 RDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of Carg15050 vs. TAIR10
Match: AT5G24314.2 (plastid transcriptionally active7)

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-47
Identity = 102/170 (60.00%), Postives = 120/170 (70.59%), Query Frame = 0 

Query: 7   TLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRK--------LT 66
           T S  S +   I TR+G         + QV+   QRD    GRRVWRRR         LT
Sbjct: 5   TCSSPSSILPIIDTRSG---NLRCTFQSQVSCGIQRDDN--GRRVWRRRTLVSTKLDILT 64

Query: 67  KKDDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE 126
           KKDDM  +KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+
Sbjct: 65  KKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVD 124

Query: 127 NNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
            NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +T
Sbjct: 125 KNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 169

[Close]
BLAST of Carg15050 vs. Swiss-Prot
Match: sp|Q8VZV9|PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.7e-48
Identity = 102/162 (62.96%), Postives = 120/162 (74.07%), Query Frame = 0 

Query: 7   TLSFASPLFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDDMSIF 66
           T S  S +   I TR+G         + QV+   QRD    GRRVWRRR LTKKDDM  +
Sbjct: 5   TCSSPSSILPIIDTRSG---NLRCTFQSQVSCGIQRDDN--GRRVWRRRTLTKKDDMLRY 64

Query: 67  KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGG 126
           KM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGG
Sbjct: 65  KMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGG 124

Query: 127 SKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           SKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +T
Sbjct: 125 SKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of Carg15050 vs. TrEMBL
Match: tr|A0A1S3C3E7|A0A1S3C3E7_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.5e-72
Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MTTPIPTLSFASPLFQ-RIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTK 60
           M TPI TLSFASP    RI+    IS   NF P  QV ARKQR+GE  GRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVEN 120
           KDDMSI+KMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of Carg15050 vs. TrEMBL
Match: tr|A0A0A0L9J8|A0A0A0L9J8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.9e-71
Identity = 142/169 (84.02%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MTTPIPTLSFASP-LFQRIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTK 60
           M TPI TLSFASP L  RI+    IS   NF P  Q+ ARKQ+ GE  GRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVEN 120
           KDDMSI+KMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of Carg15050 vs. TrEMBL
Match: tr|A0A1S4E109|A0A1S4E109_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.9e-68
Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 0 

Query: 17  RIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDDMSIFKMDRIPFLEE 76
           RI+    IS   NF P  QV ARKQR+GE  GRRVWRRRKLTKKDDMSI+KMDRIPFLEE
Sbjct: 6   RIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEE 65

Query: 77  QVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLS 136
           QVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLS
Sbjct: 66  QVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLS 125

Query: 137 NRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           NRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 126 NRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of Carg15050 vs. TrEMBL
Match: tr|D7TAM0|D7TAM0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0010g02390 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.7e-56
Identity = 116/149 (77.85%), Postives = 128/149 (85.91%), Query Frame = 0 

Query: 17  RIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDDMSIFKMDRIPFLEE 76
           RI   AG S   +F  R QV ++ QRDG   GRRVWRRRKLTKKDDM  +KMDRIPFLEE
Sbjct: 16  RIAVGAGNSWPPSFSVRSQVISQLQRDGR--GRRVWRRRKLTKKDDMLRYKMDRIPFLEE 75

Query: 77  QVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLS 136
           +VRK++E GKL+TMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGG+KKAILHVLS
Sbjct: 76  KVRKIQEGGKLLTMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGNKKAILHVLS 135

Query: 137 NRVNDAGFYRPDAYAEEDPFKPGPHYLKQ 166
           NRVNDAGFYRPDAY E +P+KPGP YLK+
Sbjct: 136 NRVNDAGFYRPDAYMESEPYKPGPGYLKE 162

[Close]
BLAST of Carg15050 vs. TrEMBL
Match: tr|A0A2I4EYX0|A0A2I4EYX0_9ROSI (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Juglans regia OX=51240 GN=LOC108993975 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.2e-55
Identity = 116/152 (76.32%), Postives = 129/152 (84.87%), Query Frame = 0 

Query: 17  RIQTRAGISHGFNFPPRLQVAARKQRDGEGVGRRVWRRRKLTKKDDMSIFKMDRIPFLEE 76
           RI+ RA  S   + P R  V ++ Q+DG   GRRVWRRRKLTKKDDM  +K++RIPFLEE
Sbjct: 17  RIEARAWNSWRPSCPVRPLVMSQIQKDGP--GRRVWRRRKLTKKDDMLRYKLERIPFLEE 76

Query: 77  QVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGSKKAILHVLS 136
           Q+RKV+E GKL+TMDIERLLLSEDNRFDFVNEVAAEAKEYVENN DEYGG KKAILHVLS
Sbjct: 77  QMRKVRETGKLLTMDIERLLLSEDNRFDFVNEVAAEAKEYVENNVDEYGGRKKAILHVLS 136

Query: 137 NRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 169
           NRVNDAGFYRP+AY E DPFKPGP YLK+EFT
Sbjct: 137 NRVNDAGFYRPEAYEESDPFKPGPDYLKEEFT 166

The following BLAST results are available for this feature:
BLAST of Carg15050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022984516.11.8e-8898.81protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita maxima][more]
XP_022923077.13.0e-8898.81protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata][more]
XP_023553427.13.0e-8898.21protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pep... [more]
XP_022984517.14.1e-8597.02protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita maxima][more]
XP_022923078.17.0e-8597.02protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2 [Cucurbita moschata][more]
BLAST of Carg15050 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24314.24.1e-4760.00plastid transcriptionally active7[more]
BLAST of Carg15050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VZV9|PTA7_ARATH4.7e-4862.96Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT... [more]
BLAST of Carg15050 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C3E7|A0A1S3C3E7_CUCME1.5e-7285.21protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0L9J8|A0A0A0L9J8_CUCSA2.9e-7184.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1[more]
tr|A0A1S4E109|A0A1S4E109_CUCME3.9e-6887.50protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN... [more]
tr|D7TAM0|D7TAM0_VITVI7.7e-5677.85Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0010g02390 PE=4 SV=... [more]
tr|A0A2I4EYX0|A0A2I4EYX0_9ROSI2.2e-5576.32protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Juglans regia OX=51240 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042793transcription from plastid promoter
Vocabulary: Cellular Component
TermDefinition
GO:0000427plastid-encoded plastid RNA polymerase complex
Vocabulary: INTERPRO
TermDefinition
IPR038958PTAC7
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 transcription from plastid promoter
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15050-RACarg15050-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038958Protein plastid transcriptionally active 7PANTHERPTHR37257FAMILY NOT NAMEDcoord: 11..167

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg15050CmaCh16G000330Cucurbita maxima (Rimu)carcmaB1366
Carg15050CmoCh16G000380Cucurbita moschata (Rifu)carcmoB1326
Carg15050Cp4.1LG14g07010Cucurbita pepo (Zucchini)carcpeB1376
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg15050Silver-seed gourdcarcarB494
Carg15050Silver-seed gourdcarcarB503
Carg15050Cucumber (Gy14) v1carcgyB1107
Carg15050Cucumber (Gy14) v2carcgybB0978
Carg15050Cucumber (Gy14) v2carcgybB0974
Carg15050Cucumber (Gy14) v1carcgyB1104
Carg15050Cucurbita maxima (Rimu)carcmaB1364
Carg15050Cucurbita maxima (Rimu)carcmaB1365
Carg15050Cucurbita maxima (Rimu)carcmaB1368
Carg15050Cucurbita maxima (Rimu)carcmaB1369
Carg15050Cucurbita moschata (Rifu)carcmoB1325
Carg15050Cucurbita moschata (Rifu)carcmoB1328
Carg15050Cucurbita moschata (Rifu)carcmoB1329
Carg15050Cucurbita pepo (Zucchini)carcpeB1373
Carg15050Cucurbita pepo (Zucchini)carcpeB1375
Carg15050Cucurbita pepo (Zucchini)carcpeB1377
Carg15050Wild cucumber (PI 183967)carcpiB1029
Carg15050Wild cucumber (PI 183967)carcpiB1024
Carg15050Cucumber (Chinese Long) v2carcuB1001
Carg15050Cucumber (Chinese Long) v2carcuB1005
Carg15050Cucumber (Chinese Long) v3carcucB1030
Carg15050Cucumber (Chinese Long) v3carcucB1035
Carg15050Bottle gourd (USVL1VR-Ls)carlsiB902
Carg15050Bottle gourd (USVL1VR-Ls)carlsiB904
Carg15050Melon (DHL92) v3.5.1carmeB0962
Carg15050Melon (DHL92) v3.5.1carmeB0966
Carg15050Melon (DHL92) v3.6.1carmedB0970
Carg15050Melon (DHL92) v3.6.1carmedB0976
Carg15050Watermelon (Charleston Gray)carwcgB0963
Carg15050Watermelon (Charleston Gray)carwcgB0964
Carg15050Watermelon (Charleston Gray)carwcgB0965
Carg15050Watermelon (97103) v1carwmB0990
Carg15050Watermelon (97103) v1carwmB0991
Carg15050Watermelon (97103) v2carwmbB1040
Carg15050Watermelon (97103) v2carwmbB1042
Carg15050Wax gourdcarwgoB1157
Carg15050Wax gourdcarwgoB1160