Carg14892 (gene) Silver-seed gourd

NameCarg14892
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein of unknown function (DUF581)
LocationCucurbita_argyrosperma_scaffold_079 : 531147 .. 531754 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTTTTAATTTCTTCGCCTTCTGTTACTATGAGAACTGTGCCGCTGTTCTACGCCGGCTGCGCCGATTTCCTTCTCCACGAACCTCACTTCCTCGAGGCCTGTTCCCTGTGCCGGAAACCGCTCGGACGTAACTCCGATATCTTCATGTACAGGTCCGTTCAATTTATCATTGCCTGAAGAGCTTTTGTTTTTGTTGAGTTTTAATCGAGAGTTCTTCGTCTGGTTACTGAGAATTTGAGGCTTGAGTATAGTCGAATTAGGCTCAGATCGGATTTATGTGGTCGTTTTTGGTTGAGGTTTGATAGAGTGATGGATAGTGGTTTAGGTTGAACTGTGTTTAGATCTAACAGTTTTTTCAGTCTATTTGTTCTGATTTGGAGGTTTCGATCTGAGAATTGATAGTTTCTTTACTGTATTGCAGAGGAAACACTCCATTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAAATCGACGAGGCGAAGGAGAAAAGTTGGAGGCGCTCTTCTTCTTCTTCATCATCTTCCTCTTCGAACACTCGTAGTCACAGAAAACAAGAAGCTGGAGAGAAAGCTGTACGGTCCGGCACCGTCGCGGTGGCCTGA

mRNA sequence

CAACTTTTAATTTCTTCGCCTTCTGTTACTATGAGAACTGTGCCGCTGTTCTACGCCGGCTGCGCCGATTTCCTTCTCCACGAACCTCACTTCCTCGAGGCCTGTTCCCTGTGCCGGAAACCGCTCGGACGTAACTCCGATATCTTCATGTACAGAGGAAACACTCCATTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAAATCGACGAGGCGAAGGAGAAAAGTTGGAGGCGCTCTTCTTCTTCTTCATCATCTTCCTCTTCGAACACTCGTAGTCACAGAAAACAAGAAGCTGGAGAGAAAGCTGTACGGTCCGGCACCGTCGCGGTGGCCTGA

Coding sequence (CDS)

CAACTTTTAATTTCTTCGCCTTCTGTTACTATGAGAACTGTGCCGCTGTTCTACGCCGGCTGCGCCGATTTCCTTCTCCACGAACCTCACTTCCTCGAGGCCTGTTCCCTGTGCCGGAAACCGCTCGGACGTAACTCCGATATCTTCATGTACAGAGGAAACACTCCATTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAAATCGACGAGGCGAAGGAGAAAAGTTGGAGGCGCTCTTCTTCTTCTTCATCATCTTCCTCTTCGAACACTCGTAGTCACAGAAAACAAGAAGCTGGAGAGAAAGCTGTACGGTCCGGCACCGTCGCGGTGGCCTGA

Protein sequence

QLLISSPSVTMRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEKSWRRSSSSSSSSSSNTRSHRKQEAGEKAVRSGTVAVA
BLAST of Carg14892 vs. NCBI nr
Match: XP_023526413.1 (uncharacterized protein LOC111789921 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0

Query: 11  MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 70
           MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID
Sbjct: 1   MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 60

Query: 71  EAKEKSWXXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EAKEKSW XXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA
Sbjct: 61  EAKEKSW-XXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 101

BLAST of Carg14892 vs. NCBI nr
Match: XP_022924574.1 (uncharacterized protein LOC111432014 [Cucurbita moschata])

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0

Query: 11  MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 70
           MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID
Sbjct: 1   MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 60

Query: 71  EAKEKSW-XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EAKEKSW XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA
Sbjct: 61  EAKEKSWXXXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 103

BLAST of Carg14892 vs. NCBI nr
Match: XP_022980451.1 (uncharacterized protein LOC111479816 [Cucurbita maxima])

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 11  MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 70
           MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID
Sbjct: 1   MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 60

Query: 71  EAKEKSW-XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EAKEKSW XXXXXXXXXXXXXXXXXXXX +GEKAVRSGTVAVA
Sbjct: 61  EAKEKSWXXXXXXXXXXXXXXXXXXXXXXSGEKAVRSGTVAVA 103

BLAST of Carg14892 vs. NCBI nr
Match: KGN56685.1 (hypothetical protein Csa_3G128930 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0

Query: 7   PSVTMRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQ 66
           P  TMRT PLFYAGCAD+LLHEPHFLEACSLCRK LGRNSDIFMYRGNTPFCSKECRQEQ
Sbjct: 37  PFFTMRTAPLFYAGCADYLLHEPHFLEACSLCRKALGRNSDIFMYRGNTPFCSKECRQEQ 96

Query: 67  IEIDEAKEKSW--XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           IEIDEAKEKSW  XXXXXXXXXXXXXXXXXXXX   +K VRSGTVAVA
Sbjct: 97  IEIDEAKEKSWXXXXXXXXXXXXXXXXXXXXXXXXXKKTVRSGTVAVA 144

BLAST of Carg14892 vs. NCBI nr
Match: XP_004133966.1 (PREDICTED: uncharacterized protein LOC101206344 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 11  MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 70
           MRT PLFYAGCAD+LLHEPHFLEACSLCRK LGRNSDIFMYRGNTPFCSKECRQEQIEID
Sbjct: 1   MRTAPLFYAGCADYLLHEPHFLEACSLCRKALGRNSDIFMYRGNTPFCSKECRQEQIEID 60

Query: 71  EAKEKSW--XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EAKEKSW  XXXXXXXXXXXXXXXXXXXX   +K VRSGTVAVA
Sbjct: 61  EAKEKSWXXXXXXXXXXXXXXXXXXXXXXXXXKKTVRSGTVAVA 104

BLAST of Carg14892 vs. TAIR10
Match: AT2G44670.1 (Protein of unknown function (DUF581))

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-19
Identity = 48/95 (50.53%), Postives = 55/95 (57.89%), Query Frame = 0

Query: 18  YAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEKSW 77
           + GC      EPHFLE+CSLCRK LG NSDIFMYRG+  FCS ECR+EQIE DEAKE+ W
Sbjct: 8   FLGC-----EEPHFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKERKW 67

Query: 78  XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
                                A    VR+GT+ VA
Sbjct: 68  ----KKSSRSLRKNSSETKESAAGNTVRTGTLVVA 93

BLAST of Carg14892 vs. TAIR10
Match: AT5G47060.1 (Protein of unknown function (DUF581))

HSP 1 Score: 90.9 bits (224), Expect = 5.4e-19
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 0

Query: 24  FLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEK 76
           F + +PHFL++C LC+KPLG N DI+MYRG+TPFCS+ECRQEQIE DEAKEK
Sbjct: 90  FDIQQPHFLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKEK 141

BLAST of Carg14892 vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581))

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-17
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0

Query: 28  EPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEK 76
           +PHFL++C LC+K LG N DIFMYRG+TPFCS+ECR+EQIE DEAKEK
Sbjct: 73  QPHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEK 120

BLAST of Carg14892 vs. TAIR10
Match: AT1G22160.1 (Protein of unknown function (DUF581))

HSP 1 Score: 64.3 bits (155), Expect = 5.4e-11
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0

Query: 31  FLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEK 76
           FL +CSLC++ L    DI+MYRG+  FCS ECRQ+QI +DE KEK
Sbjct: 78  FLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEK 122

BLAST of Carg14892 vs. TAIR10
Match: AT5G65040.1 (Protein of unknown function (DUF581))

HSP 1 Score: 63.9 bits (154), Expect = 7.1e-11
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 31  FLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEKS 77
           FL+ CSLC + L  + DI+MYRGN  FCS ECR++QI++DE K K+
Sbjct: 57  FLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKT 102

BLAST of Carg14892 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-05
Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 0

Query: 31  FLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDE 72
           FL  C  C+K L +  DI++YRG   FCS ECR +++ +D+
Sbjct: 220 FLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260

BLAST of Carg14892 vs. TrEMBL
Match: tr|A0A0A0L3Z8|A0A0A0L3Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128930 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.4e-34
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0

Query: 7   PSVTMRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQ 66
           P  TMRT PLFYAGCAD+LLHEPHFLEACSLCRK LGRNSDIFMYRGNTPFCSKECRQEQ
Sbjct: 37  PFFTMRTAPLFYAGCADYLLHEPHFLEACSLCRKALGRNSDIFMYRGNTPFCSKECRQEQ 96

Query: 67  IEIDEAKEKSW--XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           IEIDEAKEKSW  XXXXXXXXXXXXXXXXXXXX   +K VRSGTVAVA
Sbjct: 97  IEIDEAKEKSWXXXXXXXXXXXXXXXXXXXXXXXXXKKTVRSGTVAVA 144

BLAST of Carg14892 vs. TrEMBL
Match: tr|A0A1S3AW02|A0A1S3AW02_CUCME (uncharacterized protein LOC103483439 OS=Cucumis melo OX=3656 GN=LOC103483439 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.2e-32
Identity = 93/106 (87.74%), Postives = 96/106 (90.57%), Query Frame = 0

Query: 11  MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 70
           MRT PLFYAGC+D+LLHEPHFLEACSLCRK LGRNSDIFMYRGNTPFCSKECRQEQIEID
Sbjct: 1   MRTAPLFYAGCSDYLLHEPHFLEACSLCRKALGRNSDIFMYRGNTPFCSKECRQEQIEID 60

Query: 71  EAKEKSW----XXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EAKEKSW    XXXXXXXXXXXXXXXXXXXX   +K VRSGTVAVA
Sbjct: 61  EAKEKSWRXXXXXXXXXXXXXXXXXXXXXXXXXXKKTVRSGTVAVA 106

BLAST of Carg14892 vs. TrEMBL
Match: tr|F6GVD8|F6GVD8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g00940 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-25
Identity = 63/110 (57.27%), Postives = 75/110 (68.18%), Query Frame = 0

Query: 3   LISSPSVTMRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKEC 62
           + +S S + R+  L+YAGC ++  H+PHFLEAC LC+KPLG N+DIFMYRGNTPFCSKEC
Sbjct: 1   MAASSSSSPRSGLLYYAGCEEY-PHQPHFLEACFLCQKPLGNNADIFMYRGNTPFCSKEC 60

Query: 63  RQEQIEIDEAKEKSWXXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           RQEQ+E DEAKEKSW                     +  KAVRSGTVAVA
Sbjct: 61  RQEQMEFDEAKEKSW--------NMRSLRKSDSNKSSSNKAVRSGTVAVA 101

BLAST of Carg14892 vs. TrEMBL
Match: tr|A0A2R6QL13|A0A2R6QL13_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17182 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24
Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 0

Query: 11  MRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEID 70
           MR+  L YAGC ++  ++ HFLEAC LC+KPLG NSDIFMYRGNTPFCS+ECRQEQIEID
Sbjct: 1   MRSAALSYAGCGEYNQNQYHFLEACFLCQKPLGHNSDIFMYRGNTPFCSQECRQEQIEID 60

Query: 71  EAKEKSWXXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EAKE+SW                        K VR+GTV VA
Sbjct: 61  EAKERSWKISSKKALRQATESTQKTSSSPSNKGVRTGTVVVA 102

BLAST of Carg14892 vs. TrEMBL
Match: tr|V4U942|V4U942_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10023758mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24
Identity = 75/108 (69.44%), Postives = 84/108 (77.78%), Query Frame = 0

Query: 5   SSPSVTMRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQ 64
           +S  V   T+  +YAGCAD+   EPHFL++C LCRKPLG NSDIFMYRGNTPFCSKECRQ
Sbjct: 32  ASQIVFTSTMSYYYAGCADY--QEPHFLDSCFLCRKPLGYNSDIFMYRGNTPFCSKECRQ 91

Query: 65  EQIEIDEAKEKSWXXXXXXXXXXXXXXXXXXXXEAGEKAVRSGTVAVA 113
           EQIE+DEAKE+SW       XXXXXXXXXXXXX    K VR+GTVAVA
Sbjct: 92  EQIEMDEAKERSW-----KKXXXXXXXXXXXXXXTPSKTVRTGTVAVA 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023526413.12.1e-3799.02uncharacterized protein LOC111789921 [Cucurbita pepo subsp. pepo][more]
XP_022924574.12.8e-3799.03uncharacterized protein LOC111432014 [Cucurbita moschata][more]
XP_022980451.13.1e-3697.09uncharacterized protein LOC111479816 [Cucurbita maxima][more]
KGN56685.11.4e-3388.89hypothetical protein Csa_3G128930 [Cucumis sativus][more]
XP_004133966.12.1e-3290.38PREDICTED: uncharacterized protein LOC101206344 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT2G44670.13.2e-1950.53Protein of unknown function (DUF581)[more]
AT5G47060.15.4e-1973.08Protein of unknown function (DUF581)[more]
AT4G17670.11.7e-1775.00Protein of unknown function (DUF581)[more]
AT1G22160.15.4e-1160.00Protein of unknown function (DUF581)[more]
AT5G65040.17.1e-1156.52Protein of unknown function (DUF581)[more]
Match NameE-valueIdentityDescription
sp|Q8LGS1|MARD1_ARATH5.6e-0543.90Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
tr|A0A0A0L3Z8|A0A0A0L3Z8_CUCSA9.4e-3488.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128930 PE=4 SV=1[more]
tr|A0A1S3AW02|A0A1S3AW02_CUCME5.2e-3287.74uncharacterized protein LOC103483439 OS=Cucumis melo OX=3656 GN=LOC103483439 PE=... [more]
tr|F6GVD8|F6GVD8_VITVI1.6e-2557.27Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g00940 PE=4 SV=... [more]
tr|A0A2R6QL13|A0A2R6QL13_ACTCH1.0e-2456.86Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0... [more]
tr|V4U942|V4U942_9ROSI1.4e-2469.44Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10023... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007650Zf-FLZ_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14892-RACarg14892-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007650Zf-FLZ domainPFAMPF04570zf-FLZcoord: 27..73
e-value: 3.1E-24
score: 84.1
IPR007650Zf-FLZ domainPROSITEPS51795ZF_FLZcoord: 30..74
score: 26.274
NoneNo IPR availableGENE3DG3DSA:2.10.110.10coord: 14..109
e-value: 1.5E-5
score: 27.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..93
NoneNo IPR availablePANTHERPTHR33059:SF73SUBFAMILY NOT NAMEDcoord: 26..109
NoneNo IPR availablePANTHERPTHR33059FAMILY NOT NAMEDcoord: 26..109

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg14892Carg10170Silver-seed gourdcarcarB261
Carg14892Carg06328Silver-seed gourdcarcarB549
The following block(s) are covering this gene:

None