Carg14892 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAACTTTTAATTTCTTCGCCTTCTGTTACTATGAGAACTGTGCCGCTGTTCTACGCCGGCTGCGCCGATTTCCTTCTCCACGAACCTCACTTCCTCGAGGCCTGTTCCCTGTGCCGGAAACCGCTCGGACGTAACTCCGATATCTTCATGTACAGGTCCGTTCAATTTATCATTGCCTGAAGAGCTTTTGTTTTTGTTGAGTTTTAATCGAGAGTTCTTCGTCTGGTTACTGAGAATTTGAGGCTTGAGTATAGTCGAATTAGGCTCAGATCGGATTTATGTGGTCGTTTTTGGTTGAGGTTTGATAGAGTGATGGATAGTGGTTTAGGTTGAACTGTGTTTAGATCTAACAGTTTTTTCAGTCTATTTGTTCTGATTTGGAGGTTTCGATCTGAGAATTGATAGTTTCTTTACTGTATTGCAGAGGAAACACTCCATTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAAATCGACGAGGCGAAGGAGAAAAGTTGGAGGCGCTCTTCTTCTTCTTCATCATCTTCCTCTTCGAACACTCGTAGTCACAGAAAACAAGAAGCTGGAGAGAAAGCTGTACGGTCCGGCACCGTCGCGGTGGCCTGA CAACTTTTAATTTCTTCGCCTTCTGTTACTATGAGAACTGTGCCGCTGTTCTACGCCGGCTGCGCCGATTTCCTTCTCCACGAACCTCACTTCCTCGAGGCCTGTTCCCTGTGCCGGAAACCGCTCGGACGTAACTCCGATATCTTCATGTACAGAGGAAACACTCCATTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAAATCGACGAGGCGAAGGAGAAAAGTTGGAGGCGCTCTTCTTCTTCTTCATCATCTTCCTCTTCGAACACTCGTAGTCACAGAAAACAAGAAGCTGGAGAGAAAGCTGTACGGTCCGGCACCGTCGCGGTGGCCTGA CAACTTTTAATTTCTTCGCCTTCTGTTACTATGAGAACTGTGCCGCTGTTCTACGCCGGCTGCGCCGATTTCCTTCTCCACGAACCTCACTTCCTCGAGGCCTGTTCCCTGTGCCGGAAACCGCTCGGACGTAACTCCGATATCTTCATGTACAGAGGAAACACTCCATTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAAATCGACGAGGCGAAGGAGAAAAGTTGGAGGCGCTCTTCTTCTTCTTCATCATCTTCCTCTTCGAACACTCGTAGTCACAGAAAACAAGAAGCTGGAGAGAAAGCTGTACGGTCCGGCACCGTCGCGGTGGCCTGA QLLISSPSVTMRTVPLFYAGCADFLLHEPHFLEACSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIEIDEAKEKSWRRSSSSSSSSSSNTRSHRKQEAGEKAVRSGTVAVA
BLAST of Carg14892 vs. NCBI nr
Match: XP_023526413.1 (uncharacterized protein LOC111789921 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Carg14892 vs. NCBI nr
Match: XP_022924574.1 (uncharacterized protein LOC111432014 [Cucurbita moschata]) HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Carg14892 vs. NCBI nr
Match: XP_022980451.1 (uncharacterized protein LOC111479816 [Cucurbita maxima]) HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Carg14892 vs. NCBI nr
Match: KGN56685.1 (hypothetical protein Csa_3G128930 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33 Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of Carg14892 vs. NCBI nr
Match: XP_004133966.1 (PREDICTED: uncharacterized protein LOC101206344 [Cucumis sativus]) HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32 Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of Carg14892 vs. TAIR10
Match: AT2G44670.1 (Protein of unknown function (DUF581)) HSP 1 Score: 91.7 bits (226), Expect = 3.2e-19 Identity = 48/95 (50.53%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Carg14892 vs. TAIR10
Match: AT5G47060.1 (Protein of unknown function (DUF581)) HSP 1 Score: 90.9 bits (224), Expect = 5.4e-19 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of Carg14892 vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581)) HSP 1 Score: 85.9 bits (211), Expect = 1.7e-17 Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of Carg14892 vs. TAIR10
Match: AT1G22160.1 (Protein of unknown function (DUF581)) HSP 1 Score: 64.3 bits (155), Expect = 5.4e-11 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Carg14892 vs. TAIR10
Match: AT5G65040.1 (Protein of unknown function (DUF581)) HSP 1 Score: 63.9 bits (154), Expect = 7.1e-11 Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Carg14892 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 5.6e-05 Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of Carg14892 vs. TrEMBL
Match: tr|A0A0A0L3Z8|A0A0A0L3Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128930 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 9.4e-34 Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of Carg14892 vs. TrEMBL
Match: tr|A0A1S3AW02|A0A1S3AW02_CUCME (uncharacterized protein LOC103483439 OS=Cucumis melo OX=3656 GN=LOC103483439 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.2e-32 Identity = 93/106 (87.74%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Carg14892 vs. TrEMBL
Match: tr|F6GVD8|F6GVD8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g00940 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-25 Identity = 63/110 (57.27%), Postives = 75/110 (68.18%), Query Frame = 0
BLAST of Carg14892 vs. TrEMBL
Match: tr|A0A2R6QL13|A0A2R6QL13_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17182 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24 Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of Carg14892 vs. TrEMBL
Match: tr|V4U942|V4U942_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10023758mg PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24 Identity = 75/108 (69.44%), Postives = 84/108 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |